bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_1733_orf3 Length=134 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_049390 NAD-specific glutamate dehydrogenase, putati... 120 8e-28 tpv:TP04_0883 NAD-specific glutamate dehydrogenase (EC:1.4.1.2... 103 2e-22 bbo:BBOV_III009680 17.m07840; Glutamate/Leucine/Phenylalanine/... 96.3 3e-20 sce:YDL215C GDH2; Gdh2p (EC:1.4.1.2); K00260 glutamate dehydro... 77.0 1e-14 pfa:PF08_0132 glutamate dehydrogenase, putative (EC:1.4.1.2); ... 55.1 5e-08 ath:AT3G13600 calmodulin-binding family protein 34.7 0.081 ath:AT5G12850 zinc finger (CCCH-type) family protein 30.0 1.8 mmu:110789 Gpr98, Frings, Mass1, Mgr1, VLGR1; G protein-couple... 28.9 4.1 ath:AT2G18780 F-box family protein 28.5 6.6 > tgo:TGME49_049390 NAD-specific glutamate dehydrogenase, putative (EC:1.4.1.2); K00260 glutamate dehydrogenase [EC:1.4.1.2] Length=1113 Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 1/87 (1%) Query 2 KTSSMLFDSSLLSPKGFKVPQDARDITLPDGTYVASGIEFRNNFHLSKFAVCDLFNPCGG 61 +TS+ML+D LLSP GFKV QD RD+ LPDGT VASG EFR FHL DLFNPCGG Sbjct 818 QTSAMLYDEKLLSPMGFKVSQDDRDVVLPDGTAVASGFEFRGRFHLDPRGSADLFNPCGG 877 Query 62 RPASVNPRNVEQLFEQQTGLPKFKFII 88 RPASV P NV+++F+++ G P+FKFI+ Sbjct 878 RPASVTPFNVDKMFDEK-GKPRFKFIV 903 > tpv:TP04_0883 NAD-specific glutamate dehydrogenase (EC:1.4.1.2); K00260 glutamate dehydrogenase [EC:1.4.1.2] Length=1178 Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 49/96 (51%), Positives = 68/96 (70%), Gaps = 1/96 (1%) Query 2 KTSSMLFDSSLLSPKGFKVPQDARDITLPDGTYVASGIEFRNNFHLSKFAVCDLFNPCGG 61 KT SM +D LLS KGF VP++A ++ LPDG V +G +FR+ FHLS +A DLF PCGG Sbjct 869 KTCSMGYDKRLLSSKGFMVPEEAMNVVLPDGFVVKNGYKFRDEFHLSSYAKADLFCPCGG 928 Query 62 RPASVNPRNVEQLFEQQTGLPKFKFIIILHCIYLLQ 97 RP+S+ P NV +LF+++ G +FKFI+ +Y+ Q Sbjct 929 RPSSITPFNVNRLFDEK-GKCRFKFIVEGSNVYITQ 963 > bbo:BBOV_III009680 17.m07840; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase family protein (EC:1.4.1.2); K00260 glutamate dehydrogenase [EC:1.4.1.2] Length=1025 Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 48/95 (50%), Positives = 67/95 (70%), Gaps = 2/95 (2%) Query 3 TSSMLFDSSLLSPKGFKVPQDARDITLPDGTYVASGIEFRNNFHLSKFAVCDLFNPCGGR 62 TS+M ++ +LLS KGFKVP+DA D+ LPDGT V G +FR+ FHL DLFNPCGGR Sbjct 746 TSAMHYNEALLSDKGFKVPEDAVDMVLPDGTKVKRGHKFRDEFHLGA-CPSDLFNPCGGR 804 Query 63 PASVNPRNVEQLFEQQTGLPKFKFIIILHCIYLLQ 97 P+S+ P NV +LF+++ G +KFI+ +++ Q Sbjct 805 PSSITPFNVNRLFDEK-GKCIYKFIVEGANVFITQ 838 > sce:YDL215C GDH2; Gdh2p (EC:1.4.1.2); K00260 glutamate dehydrogenase [EC:1.4.1.2] Length=1092 Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 3/93 (3%) Query 8 FDSSLLSPKGFKVPQDARDITLPDGTYVASGIEFRNNFHLSKFAV---CDLFNPCGGRPA 64 FD+S LS GF V DA DI LP+GT VA+G FRN FH F D+F PCGGRP Sbjct 806 FDTSKLSNNGFFVSVDAMDIMLPNGTIVANGTTFRNTFHTQIFKFVDHVDIFVPCGGRPN 865 Query 65 SVNPRNVEQLFEQQTGLPKFKFIIILHCIYLLQ 97 S+ N+ +++TG K +I+ +++ Q Sbjct 866 SITLNNLHYFVDEKTGKCKIPYIVEGANLFITQ 898 > pfa:PF08_0132 glutamate dehydrogenase, putative (EC:1.4.1.2); K00260 glutamate dehydrogenase [EC:1.4.1.2] Length=1397 Score = 55.1 bits (131), Expect = 5e-08, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query 3 TSSMLFDSSLLSPKGFKVPQDARDITLPDGTYVASGIEFRNNFHLSKFAVCDLFNPCGGR 62 T L+D S GFK+ + ++ + G + +G++FRN F L+ C+LFNPCGGR Sbjct 1039 TCCTLYDEKYFSKDGFKISIEDHNVDI-FGNKIRNGLDFRNTFFLNPLNKCELFNPCGGR 1097 Query 63 PAS 65 P S Sbjct 1098 PHS 1100 > ath:AT3G13600 calmodulin-binding family protein Length=605 Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%) Query 43 NNFHLSK-FAVCDLFNPCGGRPASVNPRNVEQLFEQQTGLPKFKFIIILHCIYLLQFYFM 101 N F ++K F+V D NP A++ + V + F + L ++ LL F + Sbjct 88 NGFEIAKEFSVLDPRNP--KHEAAIKLQKVYKSFRTRRKLADCAVLVEQSWWKLLDFAEL 145 Query 102 EKTEETCSISIFIRESHQLALSRSSRDRRRGS 133 +++ SIS F E H+ A+SR SR R R + Sbjct 146 KRS----SISFFDIEKHETAISRWSRARTRAA 173 > ath:AT5G12850 zinc finger (CCCH-type) family protein Length=706 Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 11/66 (16%) Query 23 DARDITLPDGTYVASGIEFRNNFHLSKFAVCDLFNP----CGGRPASVNPRNVEQLFEQQ 78 +ARDI + + + F + + D+ +P RP ++NP N+E+LF + Sbjct 447 NARDIP-------SEQLSMLHEFEMQRQLAGDMHSPRFMNHSARPKTLNPSNLEELFSAE 499 Query 79 TGLPKF 84 P+F Sbjct 500 VASPRF 505 > mmu:110789 Gpr98, Frings, Mass1, Mgr1, VLGR1; G protein-coupled receptor 98 Length=6298 Score = 28.9 bits (63), Expect = 4.1, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 8/78 (10%) Query 9 DSSLLSP-KGFKVPQDA-RDITLPDGTYVASGIEFRNNFHLSKFAVCDLFNPCGGRPASV 66 +S LSP KGF V ++ R TL + + E +F VC LFNP GG Sbjct 3125 ESKDLSPSKGFIVLEEGVRSKTLRISAILDTEPEMDEHF------VCTLFNPTGGARLGA 3178 Query 67 NPRNVEQLFEQQTGLPKF 84 + + + +F+ Q L F Sbjct 3179 HVQTLITIFQNQAPLGLF 3196 > ath:AT2G18780 F-box family protein Length=370 Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 14/72 (19%) Query 7 LFDSSLLSPKGFKVPQDARDITLPDGTYVASGIEFRNNFHLSKFAVCD--------LFNP 58 LF +LL+P + + + ++L G V + N FH F +C ++NP Sbjct 78 LFSLNLLNPN--PIERLGQLVSLDGGAQV----DISNIFHCEGFLLCTTKDISRVVVWNP 131 Query 59 CGGRPASVNPRN 70 C G+ + PRN Sbjct 132 CVGQTIWIKPRN 143 Lambda K H 0.324 0.138 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2231140792 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40