bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_1776_orf1 Length=110 Score E Sequences producing significant alignments: (Bits) Value cpv:cgd7_220 GTP-binding nuclear protein ran/tc4 ; K07936 GTP-... 163 1e-40 tgo:TGME49_048340 GTP-binding nuclear protein RAN/TC4, putativ... 162 3e-40 tpv:TP01_0757 GTP-binding nuclear protein ran; K07936 GTP-bind... 156 2e-38 bbo:BBOV_IV010920 23.m06098; GTP-binding nuclear protein Ran; ... 154 7e-38 pfa:PF11_0183 ran; GTP-binding nuclear protein ran/tc4; K07936... 151 5e-37 sce:YOR185C GSP2, CNR2; GTP binding protein (mammalian Ranp ho... 145 4e-35 sce:YLR293C GSP1, CNR1, CST17; Gsp1p; K07936 GTP-binding nucle... 144 6e-35 xla:379874 ran-1, MGC53579, ran; RAN, member RAS oncogene fami... 142 2e-34 xla:100189578 ran, ara24, gsp1, ran-1, tc4, xran; RAN, member ... 142 2e-34 mmu:19384 Ran; RAN, member RAS oncogene family; K07936 GTP-bin... 142 3e-34 mmu:100045999 GTP-binding nuclear protein Ran-like; K07936 GTP... 142 3e-34 hsa:5901 RAN, ARA24, Gsp1, TC4; RAN, member RAS oncogene famil... 142 3e-34 cel:K01G5.4 ran-1; associated with RAN (nuclear import/export)... 142 4e-34 dre:30572 ran, fc16b04, wu:fc16b04; ras-related nuclear protei... 139 2e-33 ath:AT5G55190 RAN3; RAN3 (RAN GTPASE 3); GTP binding / GTPase/... 135 3e-32 ath:AT5G20010 RAN-1; RAN-1; GTP binding / GTPase/ protein bind... 135 3e-32 mmu:19428 Rasl2-9-ps, M2, Ran, Ran/M2, Rasl2-9; RAS-like, fami... 135 3e-32 ath:AT5G20020 RAN2; RAN2; GTP binding / GTPase/ protein bindin... 135 4e-32 mmu:75471 1700009N14Rik, AI429145; RIKEN cDNA 1700009N14 gene;... 134 6e-32 ath:AT5G55080 AtRAN4; AtRAN4 (Ras-related nuclear protein 4); ... 119 2e-27 sce:YOR089C VPS21, VPS12, VPT12, YPT21, YPT51; GTPase required... 73.2 2e-13 tgo:TGME49_058130 Ras family domain-containing protein (EC:3.1... 70.1 2e-12 dre:494576 zgc:110195; si:dkey-13a21.4 69.7 2e-12 dre:100333836 RAB26, member RAS oncogene family-like 69.3 3e-12 bbo:BBOV_III001720 17.m07173; Rab7; K07897 Ras-related protein... 68.9 3e-12 hsa:8934 RAB7L1, DKFZp686P1051, RAB7L; RAB7, member RAS oncoge... 67.8 8e-12 sce:YNL093W YPT53; GTPase, similar to Ypt51p and Ypt52p and to... 67.4 1e-11 mmu:328778 Rab26, A830020M03Rik; RAB26, member RAS oncogene fa... 66.2 2e-11 cpv:cgd6_3220 RAS small GTpases RIC1/ypt1 ; K07874 Ras-related... 66.2 2e-11 pfa:PFE0625w Rab1b; Rab1b, GTPase; K07976 Rab family, other 66.2 2e-11 bbo:BBOV_III007360 17.m10679; Rab1a 65.9 3e-11 dre:791154 wu:fb77g03; zgc:158741 65.9 3e-11 dre:450074 rab34, zgc:101620; RAB34, member RAS oncogene famil... 65.9 3e-11 dre:373105 rab13, cb764, hm:zeh0455; RAB13, member RAS oncogen... 65.9 3e-11 hsa:5872 RAB13; RAB13, member RAS oncogene family; K06109 Ras-... 65.5 4e-11 tgo:TGME49_014770 RAS small GTpase, putative (EC:3.1.4.12); K0... 65.5 4e-11 hsa:25837 RAB26, V46133; RAB26, member RAS oncogene family; K0... 65.5 4e-11 mmu:68328 Rab13, 0610007N03Rik, B230212B15Rik; RAB13, member R... 65.1 5e-11 xla:100158399 hypothetical protein LOC100158399 65.1 5e-11 hsa:11021 RAB35, H-ray, RAB1C, RAY; RAB35, member RAS oncogene... 65.1 5e-11 mmu:77407 Rab35, 9530019H02Rik, AU040256, H-ray, RAB1C, RAY; R... 65.1 5e-11 mmu:19335 Rab23, AW545388, opb, opb2; RAB23, member RAS oncoge... 65.1 5e-11 xla:379665 rab35, MGC69101, h-ray, rab1c; RAB35, member RAS on... 65.1 5e-11 dre:796454 RAB35, member RAS oncogene family-like 65.1 6e-11 hsa:51715 RAB23, DKFZp781H0695, HSPC137, MGC8900; RAB23, membe... 65.1 6e-11 pfa:PFE0690c Rab1a; PfRab1a; K07976 Rab family, other 64.7 6e-11 bbo:BBOV_III000780 17.m07097; Rab1b 64.7 7e-11 mmu:19344 Rab5b, C030027M18Rik; RAB5B, member RAS oncogene fam... 64.7 7e-11 hsa:5869 RAB5B; RAB5B, member RAS oncogene family; K07888 Ras-... 64.7 7e-11 cel:Y47D3A.25 rab-35; RAB family member (rab-35); K07876 Ras-r... 64.7 7e-11 > cpv:cgd7_220 GTP-binding nuclear protein ran/tc4 ; K07936 GTP-binding nuclear protein Ran Length=212 Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 78/100 (78%), Positives = 85/100 (85%), Gaps = 7/100 (7%) Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNF 70 M Q PEFKL LVGDGGVGKTTLVKRH G EFEKKYIPT+G EV PL+F+T+F Sbjct 1 MAAQAPEFKLALVGDGGVGKTTLVKRHLTG-------EFEKKYIPTIGVEVHPLKFNTDF 53 Query 71 GPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 GP++FNVWDTAGQEKFGGLRDGYYIKGQCAI+MFDVTSRI Sbjct 54 GPLIFNVWDTAGQEKFGGLRDGYYIKGQCAIIMFDVTSRI 93 > tgo:TGME49_048340 GTP-binding nuclear protein RAN/TC4, putative (EC:3.1.4.12); K07936 GTP-binding nuclear protein Ran Length=216 Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 80/96 (83%), Positives = 82/96 (85%), Gaps = 7/96 (7%) Query 15 VPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIV 74 VPEFKLILVGDGGVGKTTLVKRH G EFEKKYIPTLG EV PL+F TNFG I Sbjct 9 VPEFKLILVGDGGVGKTTLVKRHLTG-------EFEKKYIPTLGVEVHPLKFQTNFGMIT 61 Query 75 FNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 FNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVT+RI Sbjct 62 FNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTARI 97 > tpv:TP01_0757 GTP-binding nuclear protein ran; K07936 GTP-binding nuclear protein Ran Length=211 Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 75/100 (75%), Positives = 83/100 (83%), Gaps = 7/100 (7%) Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNF 70 M E+VP+FKL+LVGDGGVGKTTLVKRH G EFEKKYIPTLG EV PL+F TN Sbjct 1 MAEEVPQFKLLLVGDGGVGKTTLVKRHLTG-------EFEKKYIPTLGVEVHPLKFRTNC 53 Query 71 GPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 G + FN WDTAGQEK+GGLRDGYYIKG+CAI+MFDVTSRI Sbjct 54 GTVQFNAWDTAGQEKYGGLRDGYYIKGECAIIMFDVTSRI 93 > bbo:BBOV_IV010920 23.m06098; GTP-binding nuclear protein Ran; K07936 GTP-binding nuclear protein Ran Length=211 Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 75/100 (75%), Positives = 83/100 (83%), Gaps = 7/100 (7%) Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNF 70 M E++P+FKL+LVGDGGVGKTTLVKRH G EFEKKYIPTLG EV PL+F TN Sbjct 1 MAEEMPQFKLLLVGDGGVGKTTLVKRHLTG-------EFEKKYIPTLGVEVHPLKFRTNC 53 Query 71 GPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 G I FN WDTAGQEK+GGLRDGYYIKG+CAI+MFDVTSRI Sbjct 54 GGIQFNAWDTAGQEKYGGLRDGYYIKGECAIIMFDVTSRI 93 > pfa:PF11_0183 ran; GTP-binding nuclear protein ran/tc4; K07936 GTP-binding nuclear protein Ran Length=214 Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 73/98 (74%), Positives = 79/98 (80%), Gaps = 7/98 (7%) Query 13 EQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGP 72 E +P++KLILVGDGGVGKTT VKRH G EFEKKYIPTLG EV PL+F TNFG Sbjct 5 EYIPQYKLILVGDGGVGKTTFVKRHLTG-------EFEKKYIPTLGVEVHPLKFQTNFGK 57 Query 73 IVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 FNVWDTAGQEKFGGLRDGYYIK CAI+MFDV+SRI Sbjct 58 TQFNVWDTAGQEKFGGLRDGYYIKSDCAIIMFDVSSRI 95 > sce:YOR185C GSP2, CNR2; GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); Gsp1p homolog that is not required for viability; K07936 GTP-binding nuclear protein Ran Length=220 Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 71/97 (73%), Positives = 76/97 (78%), Gaps = 7/97 (7%) Query 14 QVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPI 73 +VP FKL+LVGDGG GKTT VKRH G EFEKKYI T+G EV PL F TNFG I Sbjct 10 EVPTFKLVLVGDGGTGKTTFVKRHLTG-------EFEKKYIATIGVEVHPLSFYTNFGEI 62 Query 74 VFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 F+VWDTAGQEKFGGLRDGYYI QCAI+MFDVTSRI Sbjct 63 KFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRI 99 > sce:YLR293C GSP1, CNR1, CST17; Gsp1p; K07936 GTP-binding nuclear protein Ran Length=219 Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 71/97 (73%), Positives = 76/97 (78%), Gaps = 7/97 (7%) Query 14 QVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPI 73 +VP FKL+LVGDGG GKTT VKRH G EFEKKYI T+G EV PL F TNFG I Sbjct 9 EVPTFKLVLVGDGGTGKTTFVKRHLTG-------EFEKKYIATIGVEVHPLSFYTNFGEI 61 Query 74 VFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 F+VWDTAGQEKFGGLRDGYYI QCAI+MFDVTSRI Sbjct 62 KFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRI 98 > xla:379874 ran-1, MGC53579, ran; RAN, member RAS oncogene family; K07936 GTP-binding nuclear protein Ran Length=216 Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 69/94 (73%), Positives = 75/94 (79%), Gaps = 7/94 (7%) Query 17 EFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFN 76 +FKL+LVGDGG GKTT VKRH G EFEKKY+ TLG EV PL F TN GPI FN Sbjct 10 QFKLVLVGDGGTGKTTFVKRHLTG-------EFEKKYVATLGVEVHPLVFHTNRGPIKFN 62 Query 77 VWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 VWDTAGQEKFGGLRDGYYI+ QCAI+MFDVTSR+ Sbjct 63 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRV 96 > xla:100189578 ran, ara24, gsp1, ran-1, tc4, xran; RAN, member RAS oncogene family; K07936 GTP-binding nuclear protein Ran Length=216 Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 69/94 (73%), Positives = 75/94 (79%), Gaps = 7/94 (7%) Query 17 EFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFN 76 +FKL+LVGDGG GKTT VKRH G EFEKKY+ TLG EV PL F TN GPI FN Sbjct 10 QFKLVLVGDGGTGKTTFVKRHLTG-------EFEKKYVATLGVEVHPLVFHTNRGPIKFN 62 Query 77 VWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 VWDTAGQEKFGGLRDGYYI+ QCAI+MFDVTSR+ Sbjct 63 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRV 96 > mmu:19384 Ran; RAN, member RAS oncogene family; K07936 GTP-binding nuclear protein Ran Length=216 Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 69/94 (73%), Positives = 75/94 (79%), Gaps = 7/94 (7%) Query 17 EFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFN 76 +FKL+LVGDGG GKTT VKRH G EFEKKY+ TLG EV PL F TN GPI FN Sbjct 10 QFKLVLVGDGGTGKTTFVKRHLTG-------EFEKKYVATLGVEVHPLVFHTNRGPIKFN 62 Query 77 VWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 VWDTAGQEKFGGLRDGYYI+ QCAI+MFDVTSR+ Sbjct 63 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRV 96 > mmu:100045999 GTP-binding nuclear protein Ran-like; K07936 GTP-binding nuclear protein Ran Length=216 Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 69/94 (73%), Positives = 75/94 (79%), Gaps = 7/94 (7%) Query 17 EFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFN 76 +FKL+LVGDGG GKTT VKRH G EFEKKY+ TLG EV PL F TN GPI FN Sbjct 10 QFKLVLVGDGGTGKTTFVKRHLTG-------EFEKKYVATLGVEVHPLVFHTNRGPIKFN 62 Query 77 VWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 VWDTAGQEKFGGLRDGYYI+ QCAI+MFDVTSR+ Sbjct 63 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRV 96 > hsa:5901 RAN, ARA24, Gsp1, TC4; RAN, member RAS oncogene family; K07936 GTP-binding nuclear protein Ran Length=216 Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 69/94 (73%), Positives = 75/94 (79%), Gaps = 7/94 (7%) Query 17 EFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFN 76 +FKL+LVGDGG GKTT VKRH G EFEKKY+ TLG EV PL F TN GPI FN Sbjct 10 QFKLVLVGDGGTGKTTFVKRHLTG-------EFEKKYVATLGVEVHPLVFHTNRGPIKFN 62 Query 77 VWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 VWDTAGQEKFGGLRDGYYI+ QCAI+MFDVTSR+ Sbjct 63 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRV 96 > cel:K01G5.4 ran-1; associated with RAN (nuclear import/export) function family member (ran-1); K07936 GTP-binding nuclear protein Ran Length=215 Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 69/96 (71%), Positives = 76/96 (79%), Gaps = 7/96 (7%) Query 15 VPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIV 74 +P FKL+LVGDGG GKTT VKRH G EFEKKY+ TLG EV PL F TN G I Sbjct 7 IPTFKLVLVGDGGTGKTTFVKRHLTG-------EFEKKYVATLGVEVHPLVFHTNRGQIR 59 Query 75 FNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 FNVWDTAGQEKFGGLRDGYYI+GQCAI+MFDVT+R+ Sbjct 60 FNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARV 95 > dre:30572 ran, fc16b04, wu:fc16b04; ras-related nuclear protein; K07936 GTP-binding nuclear protein Ran Length=215 Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 70/102 (68%), Positives = 77/102 (75%), Gaps = 9/102 (8%) Query 11 MTEQVPE--FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFST 68 M E P+ FKL+LVGDGG GKTT VKRH G EFEKKY+ TLG EV PL F T Sbjct 1 MAENEPQVQFKLVLVGDGGTGKTTFVKRHLTG-------EFEKKYVATLGVEVHPLVFHT 53 Query 69 NFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 N G I +NVWDTAGQEKFGGLRDGYYI+ QCAI+MFDVTSR+ Sbjct 54 NRGAIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRV 95 > ath:AT5G55190 RAN3; RAN3 (RAN GTPASE 3); GTP binding / GTPase/ protein binding; K07936 GTP-binding nuclear protein Ran Length=221 Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/101 (66%), Positives = 74/101 (73%), Gaps = 7/101 (6%) Query 10 KMTEQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTN 69 + T P FKL++VGDGG GKTT VKRH G EFEKKY PT+G EV PL F TN Sbjct 6 QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTG-------EFEKKYEPTIGVEVHPLDFFTN 58 Query 70 FGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 G I F WDTAGQEKFGGLRDGYYI GQCAI+MFDVT+R+ Sbjct 59 CGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARL 99 > ath:AT5G20010 RAN-1; RAN-1; GTP binding / GTPase/ protein binding; K07936 GTP-binding nuclear protein Ran Length=221 Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/101 (66%), Positives = 74/101 (73%), Gaps = 7/101 (6%) Query 10 KMTEQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTN 69 + T P FKL++VGDGG GKTT VKRH G EFEKKY PT+G EV PL F TN Sbjct 6 QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTG-------EFEKKYEPTIGVEVHPLDFFTN 58 Query 70 FGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 G I F WDTAGQEKFGGLRDGYYI GQCAI+MFDVT+R+ Sbjct 59 CGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARL 99 > mmu:19428 Rasl2-9-ps, M2, Ran, Ran/M2, Rasl2-9; RAS-like, family 2, locus 9, pseudogene; K07936 GTP-binding nuclear protein Ran Length=216 Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 65/94 (69%), Positives = 74/94 (78%), Gaps = 7/94 (7%) Query 17 EFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFN 76 +FK++LVGDGG GKTT +KRH G EFEK+Y+ TLG EV L F TN GPI FN Sbjct 10 QFKVVLVGDGGTGKTTFMKRHLTG-------EFEKEYVATLGVEVHTLVFHTNRGPIKFN 62 Query 77 VWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 VWDTAGQEKFGGLRDGYYI+ QCAI+MFDVTSR+ Sbjct 63 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRV 96 > ath:AT5G20020 RAN2; RAN2; GTP binding / GTPase/ protein binding; K07936 GTP-binding nuclear protein Ran Length=221 Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 67/101 (66%), Positives = 74/101 (73%), Gaps = 7/101 (6%) Query 10 KMTEQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTN 69 + T P FKL++VGDGG GKTT VKRH G EFEKKY PT+G EV PL F TN Sbjct 6 QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTG-------EFEKKYEPTIGVEVHPLDFFTN 58 Query 70 FGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 G I F WDTAGQEKFGGLRDGYYI GQCAI+MFDVT+R+ Sbjct 59 CGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARL 99 > mmu:75471 1700009N14Rik, AI429145; RIKEN cDNA 1700009N14 gene; K07936 GTP-binding nuclear protein Ran Length=216 Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 67/94 (71%), Positives = 73/94 (77%), Gaps = 7/94 (7%) Query 17 EFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFN 76 +FKL+LVGDGG GKT VKRH G EFEKKY+ TLG EV PL F T+ GPI FN Sbjct 10 QFKLVLVGDGGTGKTAFVKRHLTG-------EFEKKYVATLGVEVHPLMFHTSRGPIKFN 62 Query 77 VWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 VWDTAGQEKFGGLRDGYYI+ Q AI+MFDVTSRI Sbjct 63 VWDTAGQEKFGGLRDGYYIQAQGAIIMFDVTSRI 96 > ath:AT5G55080 AtRAN4; AtRAN4 (Ras-related nuclear protein 4); GTP binding / GTPase/ protein binding; K07936 GTP-binding nuclear protein Ran Length=222 Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 70/109 (64%), Gaps = 13/109 (11%) Query 1 FPNPPPTDLKMTEQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAE 60 PN DL P FKL++VGDGG GKTT +KRH G EFE PTLG + Sbjct 3 LPNQQNVDL------PTFKLLIVGDGGTGKTTFLKRHLTG-------EFEHNTEPTLGVD 49 Query 61 VRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 + PL F TN G I F WDTAGQEK+ GL+D YYI GQCAI+MFDVT+R Sbjct 50 IYPLDFFTNRGKIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTAR 98 > sce:YOR089C VPS21, VPS12, VPT12, YPT21, YPT51; GTPase required for transport during endocytosis and for correct sorting of vacuolar hydrolases; localized in endocytic intermediates; detected in mitochondria; geranylgeranylation required for membrane association; mammalian Rab5 homolog; K07976 Rab family, other Length=210 Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 7/97 (7%) Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNF 70 M V KL+L+G+ VGK+++V R F +++F + PT+GA R + N Sbjct 1 MNTSVTSIKLVLLGEAAVGKSSIVLR-------FVSNDFAENKEPTIGAAFLTQRVTINE 53 Query 71 GPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVT 107 + F +WDTAGQE+F L YY Q A++++DVT Sbjct 54 HTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVT 90 > tgo:TGME49_058130 Ras family domain-containing protein (EC:3.1.4.12) Length=238 Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 10/110 (9%) Query 3 NPPPTDLKMTEQVPE---FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGA 59 N P +++ ++P FKL+L+GD GVGK+ L+ R S A F + YI T+G Sbjct 17 NWPLDRVQLCARIPLDHLFKLVLIGDSGVGKSCLLLRFSDDA-------FTESYITTIGV 69 Query 60 EVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 + R + + + +WDTAGQE+F + YY ++++DVT R Sbjct 70 DFRFRTINVDNEIVKLQIWDTAGQERFRTITSAYYRGADGIVLVYDVTDR 119 > dre:494576 zgc:110195; si:dkey-13a21.4 Length=205 Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 8/101 (7%) Query 11 MTE-QVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTN 69 MTE P KLIL+G+ GVGK++ + R F F Y T+G + + + Sbjct 1 MTEWNTPHLKLILIGNSGVGKSSFMTR-------FVDHRFTNLYRATIGVDFLTKEITVD 53 Query 70 FGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 P++ +WDTAG E+F L Y C +++FDVTS + Sbjct 54 RRPVILQIWDTAGTERFHSLGSSLYRGAHCCLLVFDVTSSV 94 > dre:100333836 RAB26, member RAS oncogene family-like Length=148 Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 6/92 (6%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FK++LVGD GVGKT L+ R GA L G+ +I T+G + R S + + + Sbjct 56 FKVMLVGDSGVGKTCLLVRFKDGAFLAGS------FISTVGIDFRNKVLSIDSMRVKLQI 109 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 WDTAGQE+F + YY ++++DVT++ Sbjct 110 WDTAGQERFRSVTHAYYRDAHALLLLYDVTNK 141 > bbo:BBOV_III001720 17.m07173; Rab7; K07897 Ras-related protein Rab-7A Length=233 Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 7/101 (6%) Query 9 LKMTEQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFST 68 + M + P K+I++GD GVGKT+L+ N F F +Y T+GA+ + Sbjct 17 ISMARKRPILKIIILGDSGVGKTSLM-------NQFINKRFTNQYRATIGADFSTQEVTV 69 Query 69 NFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 + + +WDTAGQE+F L +Y C ++++D T++ Sbjct 70 DDKVVTLQIWDTAGQERFQSLGKAFYRGADCCMLVYDTTNQ 110 > hsa:8934 RAB7L1, DKFZp686P1051, RAB7L; RAB7, member RAS oncogene family-like 1; K07916 Ras-related protein Rab-7L1 Length=203 Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 10/93 (10%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAE--VRPLRFSTNFGPIVF 75 FK+++VGD VGKT+LV+R+S + F K Y T+G + ++ L++S ++ + Sbjct 8 FKVLVVGDAAVGKTSLVQRYSQDS-------FSKHYKSTVGVDFALKVLQWS-DYEIVRL 59 Query 76 NVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 108 +WD AGQE+F + YY ++MFDVT+ Sbjct 60 QLWDIAGQERFTSMTRLYYRDASACVIMFDVTN 92 > sce:YNL093W YPT53; GTPase, similar to Ypt51p and Ypt52p and to mammalian rab5; required for vacuolar protein sorting and endocytosis; K07976 Rab family, other Length=220 Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 9/101 (8%) Query 10 KMTEQVPEF--KLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFS 67 K T +P K++L+G+ VGK+++V R F + +F++ PT+GA R + Sbjct 3 KHTAAIPTLTIKVVLLGESAVGKSSIVLR-------FVSDDFKESKEPTIGAAFLTKRIT 55 Query 68 TNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 108 + I F +WDTAGQE+F L YY Q A+++FDVT+ Sbjct 56 RDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTN 96 > mmu:328778 Rab26, A830020M03Rik; RAB26, member RAS oncogene family; K07913 Ras-related protein Rab-26 Length=260 Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 6/92 (6%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FK++LVGD GVGKT L+ R GA L G +I T+G + R + + + Sbjct 68 FKVMLVGDSGVGKTCLLVRFKDGAFLAGT------FISTVGIDFRNKVLDVDGMKVKLQI 121 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 WDTAGQE+F + YY ++++D+T++ Sbjct 122 WDTAGQERFRSVTHAYYRDAHALLLLYDITNK 153 > cpv:cgd6_3220 RAS small GTpases RIC1/ypt1 ; K07874 Ras-related protein Rab-1A Length=203 Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 7/92 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+L+GD GVGK+ L+ R F + YI T+G + + S + + Sbjct 9 FKLLLIGDSGVGKSCLLLR-------FADDTYTDSYISTIGVDFKIRTISLENKTVKLQI 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 WDTAGQE+F + YY I+++DVT R Sbjct 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDR 93 > pfa:PFE0625w Rab1b; Rab1b, GTPase; K07976 Rab family, other Length=200 Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 7/92 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FK++L+GD GVGK+ L+ R F + YI T+G + + I + Sbjct 9 FKILLIGDSGVGKSCLLLR-------FADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQI 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 WDTAGQE+F + YY Q I+++DVT R Sbjct 62 WDTAGQERFRTITSSYYRGAQGIIIVYDVTDR 93 > bbo:BBOV_III007360 17.m10679; Rab1a Length=213 Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 7/93 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+L+GD GVGK+ ++ R F F YI T+G + R + + Sbjct 13 FKLVLIGDSGVGKSCVLLR-------FADDTFTDSYITTIGVDFRFRTIEVEGRRVKLQI 65 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 WDTAGQE+F + YY I++FD+T ++ Sbjct 66 WDTAGQERFRTITSAYYRGADAIIIVFDITDKL 98 > dre:791154 wu:fb77g03; zgc:158741 Length=184 Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 9/92 (9%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+L+GD GVGKT L+ R S A F +I T+G + + N I + Sbjct 9 FKLLLIGDSGVGKTCLLFRFSEDA-------FNTTFISTIGIDFKIRTIELNGKKIKLQI 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMM-FDVTS 108 WDTAGQE+F + YY +G IM+ +D+TS Sbjct 62 WDTAGQERFRTITTAYY-RGAMGIMLVYDITS 92 > dre:450074 rab34, zgc:101620; RAB34, member RAS oncogene family; K07921 Ras-related protein Rab-34 Length=260 Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 7/89 (7%) Query 19 KLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNVW 78 K+I+VGD VGKT L+ R F F+K Y T+G + RF P +W Sbjct 55 KVIVVGDLAVGKTCLINR-------FCKDVFDKNYKATIGVDFEMERFEVLGVPFSLQLW 107 Query 79 DTAGQEKFGGLRDGYYIKGQCAIMMFDVT 107 DTAGQE+F + YY Q I++FD+T Sbjct 108 DTAGQERFKCIASTYYRGAQAVIIVFDLT 136 > dre:373105 rab13, cb764, hm:zeh0455; RAB13, member RAS oncogene family; K06109 Ras-related protein Rab-13 Length=200 Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 7/90 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+L+GD GVGKT L+ R F F YI T+G + + + V Sbjct 9 FKLLLIGDSGVGKTCLIIR-------FAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQV 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVT 107 WDTAGQE+F + YY I+++D+T Sbjct 62 WDTAGQERFKTITTAYYRGAMGIILVYDIT 91 > hsa:5872 RAB13; RAB13, member RAS oncogene family; K06109 Ras-related protein Rab-13 Length=203 Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 7/90 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+L+GD GVGKT L+ R F F YI T+G + + I V Sbjct 9 FKLLLIGDSGVGKTCLIIR-------FAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQV 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVT 107 WDTAGQE+F + YY I+++D+T Sbjct 62 WDTAGQERFKTITTAYYRGAMGIILVYDIT 91 > tgo:TGME49_014770 RAS small GTpase, putative (EC:3.1.4.12); K07874 Ras-related protein Rab-1A Length=202 Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+L+GD GVGK+ L+ R F + + YI T+G + + + + + Sbjct 9 FKLLLIGDSGVGKSCLLLR-------FADDTYTESYISTIGVDFKIRTIDLDGKTVKLQI 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 WDTAGQE+F + YY I+++DVT R Sbjct 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDR 93 > hsa:25837 RAB26, V46133; RAB26, member RAS oncogene family; K07913 Ras-related protein Rab-26 Length=256 Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 6/92 (6%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FK++LVGD GVGKT L+ R GA L G +I T+G + R + + + Sbjct 64 FKVMLVGDSGVGKTCLLVRFKDGAFLAGT------FISTVGIDFRNKVLDVDGVKVKLQM 117 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 WDTAGQE+F + YY ++++DVT++ Sbjct 118 WDTAGQERFRSVTHAYYRDAHALLLLYDVTNK 149 > mmu:68328 Rab13, 0610007N03Rik, B230212B15Rik; RAB13, member RAS oncogene family; K06109 Ras-related protein Rab-13 Length=202 Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 7/90 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+L+GD GVGKT L+ R F F YI T+G + + I V Sbjct 9 FKLLLIGDSGVGKTCLIIR-------FAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQV 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVT 107 WDTAGQE+F + YY I+++D+T Sbjct 62 WDTAGQERFKTITTAYYRGAMGIILVYDIT 91 > xla:100158399 hypothetical protein LOC100158399 Length=201 Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 7/90 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+L+GD GVGKT L+ R F F YI T+G + + I V Sbjct 9 FKLLLIGDSGVGKTCLIVR-------FSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQV 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVT 107 WDTAGQE+F + YY I+++D+T Sbjct 62 WDTAGQERFKTITTAYYRGAMGIILVYDIT 91 > hsa:11021 RAB35, H-ray, RAB1C, RAY; RAB35, member RAS oncogene family; K07876 Ras-related protein Rab-35 Length=152 Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+++GD GVGK++L+ R F + F YI T+G + + N + + Sbjct 9 FKLLIIGDSGVGKSSLLLR-------FADNTFSGSYITTIGVDFKIRTVEINGEKVKLQI 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 108 WDTAGQE+F + YY I+++DVTS Sbjct 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVTS 92 > mmu:77407 Rab35, 9530019H02Rik, AU040256, H-ray, RAB1C, RAY; RAB35, member RAS oncogene family; K07876 Ras-related protein Rab-35 Length=201 Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+++GD GVGK++L+ R F + F YI T+G + + N + + Sbjct 9 FKLLIIGDSGVGKSSLLLR-------FADNTFSGSYITTIGVDFKIRTVEINGEKVKLQI 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 108 WDTAGQE+F + YY I+++DVTS Sbjct 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVTS 92 > mmu:19335 Rab23, AW545388, opb, opb2; RAB23, member RAS oncogene family; K06234 Ras-related protein Rab-23 Length=237 Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 K+++VG+G VGK+++++R+ G F K Y T+G + + N + + Sbjct 10 IKMVVVGNGAVGKSSMIQRYCKGI-------FTKDYKKTIGVDFLERQIQVNDEDVRLML 62 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 WDTAGQE+F + YY Q +++F T R Sbjct 63 WDTAGQEEFDAITKAYYRGAQACVLVFSTTDR 94 > xla:379665 rab35, MGC69101, h-ray, rab1c; RAB35, member RAS oncogene family; K07876 Ras-related protein Rab-35 Length=201 Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+++GD GVGK++L+ R F + F YI T+G + + N + + Sbjct 9 FKLLIIGDSGVGKSSLLLR-------FADNTFSGSYITTIGVDFKIRTVEINGEKVKLQI 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 108 WDTAGQE+F + YY I+++DVTS Sbjct 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVTS 92 > dre:796454 RAB35, member RAS oncogene family-like Length=199 Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+++GD GVGK++L+ R F + F YI T+G + + N + + Sbjct 9 FKLLIIGDSGVGKSSLLLR-------FADNTFSGSYITTIGVDFKIRTVEINGEKVKLQI 61 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 108 WDTAGQE+F + YY I+++DVTS Sbjct 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVTS 92 > hsa:51715 RAB23, DKFZp781H0695, HSPC137, MGC8900; RAB23, member RAS oncogene family; K06234 Ras-related protein Rab-23 Length=237 Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 K+++VG+G VGK+++++R+ G F K Y T+G + + N + + Sbjct 10 IKMVVVGNGAVGKSSMIQRYCKGI-------FTKDYKKTIGVDFLERQIQVNDEDVRLML 62 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 WDTAGQE+F + YY Q +++F T R Sbjct 63 WDTAGQEEFDAITKAYYRGAQACVLVFSTTDR 94 > pfa:PFE0690c Rab1a; PfRab1a; K07976 Rab family, other Length=207 Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 7/92 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 +K+IL+GD GVGK+ ++ R F F + YI T+G + R + + + Sbjct 13 YKIILIGDSGVGKSCILLR-------FSDDHFTESYITTIGVDFRFRTIKVDDKIVKLQI 65 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 WDTAGQE+F + YY I+++D T R Sbjct 66 WDTAGQERFRTITSAYYRGADGIIIIYDTTDR 97 > bbo:BBOV_III000780 17.m07097; Rab1b Length=221 Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 7/93 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FK+I++GD G GK++L+ R F + + Y+ T+G + + + I + Sbjct 8 FKIIIIGDSGAGKSSLLLR-------FADDTYSESYMSTIGVDFKIKTVKIDNVTIKLQI 60 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRI 110 WDTAGQE+F + YY I ++DVTSR+ Sbjct 61 WDTAGQERFRTITSTYYRGAHGIITVYDVTSRV 93 > mmu:19344 Rab5b, C030027M18Rik; RAB5B, member RAS oncogene family; K07888 Ras-related protein Rab-5B Length=215 Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 11/108 (10%) Query 2 PNPPPTDLKMTEQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEV 61 PN P K + +FKL+L+G+ VGK++LV R G +F + T+GA Sbjct 9 PNGQPQASK----ICQFKLVLLGESAVGKSSLVLRFVKG-------QFHEYQESTIGAAF 57 Query 62 RPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 + + F +WDTAGQE++ L YY Q AI+++D+T++ Sbjct 58 LTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQ 105 > hsa:5869 RAB5B; RAB5B, member RAS oncogene family; K07888 Ras-related protein Rab-5B Length=215 Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 11/108 (10%) Query 2 PNPPPTDLKMTEQVPEFKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEV 61 PN P K + +FKL+L+G+ VGK++LV R G +F + T+GA Sbjct 9 PNGQPQASK----ICQFKLVLLGESAVGKSSLVLRFVKG-------QFHEYQESTIGAAF 57 Query 62 RPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 109 + + F +WDTAGQE++ L YY Q AI+++D+T++ Sbjct 58 LTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQ 105 > cel:Y47D3A.25 rab-35; RAB family member (rab-35); K07876 Ras-related protein Rab-35 Length=209 Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 7/91 (7%) Query 18 FKLILVGDGGVGKTTLVKRHSHGANLFGASEFEKKYIPTLGAEVRPLRFSTNFGPIVFNV 77 FKL+++GD GVGK++L+ R F + F + YI T+G + + N + + Sbjct 11 FKLLIIGDSGVGKSSLLLR-------FADNTFSENYITTIGVDFKIRTMDINGQRVKLQI 63 Query 78 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 108 WDTAGQE+F + YY ++++DVT+ Sbjct 64 WDTAGQERFRTITSTYYRGTHGVVVVYDVTN 94 Lambda K H 0.321 0.142 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2067351240 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40