bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_1785_orf3
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_010360 DEAD/DEAH box helicase, putative (EC:5.99.1.... 457 3e-128
pfa:PFE1390w RNA helicase-1; K13116 ATP-dependent RNA helicase... 358 2e-98
ath:AT5G51280 DEAD-box protein abstrakt, putative; K13116 ATP-... 301 3e-81
cpv:cgd7_4600 abstrakt protein SF II helicase + Znknuckle C2HC... 291 2e-78
mmu:72935 Ddx41, 2900024F02Rik, AA958953, ABS, AI324246; DEAD ... 286 6e-77
hsa:51428 DDX41, ABS, MGC8828; DEAD (Asp-Glu-Ala-Asp) box poly... 286 7e-77
ath:AT4G33370 DEAD-box protein abstrakt, putative 282 9e-76
tpv:TP02_0316 RNA helicase-1; K13116 ATP-dependent RNA helicas... 257 4e-68
cel:H27M09.1 hypothetical protein; K13116 ATP-dependent RNA he... 243 7e-64
dre:394020 ddx41, MGC55896, wu:fb92e02, zgc:55896; DEAD (Asp-G... 213 7e-55
tpv:TP04_0265 small nuclear ribonucleoprotein; K12858 ATP-depe... 177 5e-44
tgo:TGME49_098020 DEAD-box ATP-dependent RNA helicase, putativ... 174 6e-43
bbo:BBOV_II003280 18.m06276; DEAD box RNA helicase; K12858 ATP... 173 6e-43
ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-depe... 170 5e-42
cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member (d... 170 8e-42
pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA... 169 1e-41
ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823 A... 167 6e-41
dre:334283 ddx23, wu:fi39b12, zgc:63742; DEAD (Asp-Glu-Ala-Asp... 165 2e-40
cpv:cgd3_3690 U5 snRNP 100 kD protein ; K12858 ATP-dependent R... 165 2e-40
hsa:9416 DDX23, MGC8416, PRPF28, U5-100K, U5-100KD, prp28; DEA... 163 8e-40
mmu:74351 Ddx23, 3110082M05Rik, 4921506D17Rik; DEAD (Asp-Glu-A... 163 9e-40
dre:556764 similar to Probable RNA-dependent helicase p72 (DEA... 162 2e-39
ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dep... 160 8e-39
xla:398649 ddx17, MGC80019; DEAD (Asp-Glu-Ala-Asp) box polypep... 160 8e-39
mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C8092... 159 2e-38
hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-A... 158 2e-38
xla:399382 ddx5, MGC81559; DEAD (Asp-Glu-Ala-Asp) box polypept... 158 2e-38
dre:503932 ddx42, im:7148194, zgc:111815; DEAD (Asp-Glu-Ala-As... 157 3e-38
ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putat... 157 4e-38
hsa:11325 DDX42, FLJ43179, RHELP, RNAHP, SF3b125; DEAD (Asp-Gl... 157 4e-38
dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp) ... 157 4e-38
mmu:72047 Ddx42, 1810047H21Rik, AW319508, AW556242, B430002H05... 157 5e-38
xla:444634 MGC84147 protein 155 2e-37
xla:379390 MGC53795; similar to DEAD/H (Asp-Glu-Ala-Asp/His) b... 155 2e-37
sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA... 154 4e-37
dre:322206 ddx5, wu:fa56a07, wu:fb11e01, wu:fb16c10, wu:fb53b0... 154 5e-37
pfa:PF14_0437 helicase, putative 154 6e-37
xla:380261 ddx42, MGC54025; DEAD (Asp-Glu-Ala-Asp) box polypep... 152 1e-36
cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA hel... 152 1e-36
tpv:TP04_0562 RNA helicase; K12823 ATP-dependent RNA helicase ... 152 2e-36
bbo:BBOV_II004470 18.m06373; p68-like protein; K12823 ATP-depe... 152 2e-36
mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI95... 149 1e-35
hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD... 149 1e-35
cpv:cgd2_1010 hypothetical protein ; K12823 ATP-dependent RNA ... 149 2e-35
ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-depe... 147 4e-35
hsa:1655 DDX5, DKFZp434E109, DKFZp686J01190, G17P1, HLR1, HUMP... 147 5e-35
ath:AT3G09620 DEAD/DEAH box helicase, putative 147 6e-35
mmu:13207 Ddx5, 2600009A06Rik, G17P1, HUMP68, Hlr1, MGC118083,... 147 8e-35
tgo:TGME49_113240 DEAD/DEAH box helicase, putative (EC:5.99.1.... 146 1e-34
mmu:432554 Gm12183, OTTMUSG00000005521; predicted gene 12183; ... 145 2e-34
> tgo:TGME49_010360 DEAD/DEAH box helicase, putative (EC:5.99.1.3);
K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
Length=657
Score = 457 bits (1175), Expect = 3e-128, Method: Compositional matrix adjust.
Identities = 224/292 (76%), Positives = 254/292 (86%), Gaps = 0/292 (0%)
Query 27 AAISKARLDFRKTLLATSRKLRQEAEKNKKDVVQEIEEEEQRILEQVSKSLGAPLQGVRE 86
AA+S+AR DFRKTLLATS KLR EAE KKD+ +E+EEEE+RILEQVSKS+GAPLQGVRE
Sbjct 99 AALSRARADFRKTLLATSHKLRAEAEAQKKDIEKEMEEEEKRILEQVSKSMGAPLQGVRE 158
Query 87 RAKGIVYSKRMATSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQP 146
RAKGIVY+ RM +SW +P KY EMT AEA EVRERFF+DV+G D PPPFRNFKDM FPQP
Sbjct 159 RAKGIVYTSRMQSSWRLPDKYAEMTLAEANEVRERFFIDVSGEDPPPPFRNFKDMRFPQP 218
Query 147 ILDALKKKNITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSP 206
IL L+++ I+ PTQIQMQGIPA+LQGRD+IGIAFTGSGKTLVF+LPM+MGALESE+RSP
Sbjct 219 ILKGLQERGISYPTQIQMQGIPAILQGRDIIGIAFTGSGKTLVFSLPMIMGALESEIRSP 278
Query 207 YIAGEGPWGLVVCPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIR 266
Y+ GEGP+GLVVCPSRELASQT DV +FF L +GGYP LRC+C+IGG S EQA +R
Sbjct 279 YLPGEGPFGLVVCPSRELASQTNDVCSFFCKKLEDGGYPALRCVCIIGGCSAVEQAKEVR 338
Query 267 NGVHCVVATPGRLTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
GVHC+VATPGRLTDMLNKRR+ L QC YL FDEADRMVDMGFEEEVRNVLD
Sbjct 339 QGVHCIVATPGRLTDMLNKRRLALQQCEYLCFDEADRMVDMGFEEEVRNVLD 390
> pfa:PFE1390w RNA helicase-1; K13116 ATP-dependent RNA helicase
DDX41 [EC:3.6.4.13]
Length=665
Score = 358 bits (919), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 163/286 (56%), Positives = 220/286 (76%), Gaps = 0/286 (0%)
Query 33 RLDFRKTLLATSRKLRQEAEKNKKDVVQEIEEEEQRILEQVSKSLGAPLQGVRERAKGIV 92
++DFRKTLL T K+R E + ++ D +EI + E+++L QVSK+L APLQ V+ERAKGIV
Sbjct 114 KVDFRKTLLETFHKIRLEKKNDEIDETEEIRKREEKLLAQVSKALNAPLQSVKERAKGIV 173
Query 93 YSKRMATSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALK 152
Y + + + W +P KY+ + ++ +++R F++DVNG D+P P +NFKDM FP+ IL L+
Sbjct 174 YKENVESIWKLPKKYKLLKKSYVEKIRRIFYIDVNGDDIPAPIKNFKDMKFPKAILKGLR 233
Query 153 KKNITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEG 212
KKNI PTQIQMQG+P++L GRD+IGIAFTGSGKT+VF LP++M LE+E+R GEG
Sbjct 234 KKNIKKPTQIQMQGLPSILLGRDIIGIAFTGSGKTIVFVLPLIMKCLEAEIRCKLEEGEG 293
Query 213 PWGLVVCPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCV 272
P GL++CPSRELA+QT +++ +F L++ +P LR LCMIGG+S EQ I+ G+H +
Sbjct 294 PIGLIICPSRELATQTHNIIKYFCEFLYKDNFPTLRSLCMIGGISAYEQGREIQKGIHMI 353
Query 273 VATPGRLTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
VATPGRL DMLNK+RM L QCRYL FDEADR++D+GFEEEVRN LD
Sbjct 354 VATPGRLNDMLNKKRMTLEQCRYLCFDEADRLIDLGFEEEVRNTLD 399
> ath:AT5G51280 DEAD-box protein abstrakt, putative; K13116 ATP-dependent
RNA helicase DDX41 [EC:3.6.4.13]
Length=591
Score = 301 bits (770), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 191/277 (68%), Gaps = 7/277 (2%)
Query 47 LRQEAEKNKKDV-----VQEIEEEEQRILEQVSKSLGAPLQGVRERAKGIVYSKRMATSW 101
L +A + K+DV ++I +E+ ++E +S L VRE AKGI Y++ + T W
Sbjct 54 LLVQATQLKRDVPEVSATEQIILQEKEMMEHLSDK--KTLMSVRELAKGITYTEPLLTGW 111
Query 102 TMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQ 161
P R+M+ + +R+++ + VNG D+PPP +NFKDM FP+P+LD LK+K I PT
Sbjct 112 KPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTP 171
Query 162 IQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPS 221
IQ+QG+P +L GRD+IGIAFTGSGKTLVF LPM+M AL+ EM P AGEGP GL+VCPS
Sbjct 172 IQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPS 231
Query 222 RELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTD 281
RELA QT +VV F L E GYP LR L IGG+ + Q ++ GVH VVATPGRL D
Sbjct 232 RELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKD 291
Query 282 MLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
ML K++M L+ CRYL DEADR+VD+GFE+++R V D
Sbjct 292 MLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFD 328
> cpv:cgd7_4600 abstrakt protein SF II helicase + Znknuckle C2HC
(PA) ; K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
Length=570
Score = 291 bits (746), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/303 (47%), Positives = 198/303 (65%), Gaps = 19/303 (6%)
Query 35 DFRKTLLATSRKLRQEAEKNKK----DVVQEIEEEEQRILEQVSKSLGAPLQGVRERAKG 90
D +++L A SR +R E EK +K + ++ EE+++L V++S APL+ V E AKG
Sbjct 3 DNKRSLYAISRSIRDEEEKKRKLNPHYSLDTLKAEEEKLLAAVNQSYNAPLKAVHEIAKG 62
Query 91 IVYSKRMATSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDA 150
I +SKR TSW +P KY ++ +E Q++R R + VNG+DVPPP +FKDM FPQ ILDA
Sbjct 63 ITFSKREETSWRVPKKYSSLSASECQDLRSRLLIVVNGSDVPPPILSFKDMGFPQEILDA 122
Query 151 LKKKNITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAG 210
L K I+ P+QIQMQG+P +L GRDLIG+AFTGSGKT+VF LPM+M +LE+E+ P+
Sbjct 123 LASKGISKPSQIQMQGLPIILMGRDLIGLAFTGSGKTIVFVLPMIMFSLEAELSLPFKGM 182
Query 211 EGPWGLVVCPSRELASQTTDVVNFFATAL--------------HEGGYPQLRCLCMIGGV 256
EGP LV+CPSRELA Q +++ F L YP+LR C+IGG
Sbjct 183 EGPHSLVLCPSRELALQIKRIIDEFIEFLTGKSNKSDEYSSNPRNTKYPELRVSCVIGGE 242
Query 257 STQEQ-ATFIRNGVHCVVATPGRLTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRN 315
+ +Q A + G+H +VATPGRL D+L +R++ L QC Y DEADR+ + GF+E +R
Sbjct 243 DSGKQLAEYKMKGIHMMVATPGRLADLLKRRKVTLQQCEYFCMDEADRLTEQGFDEHLRY 302
Query 316 VLD 318
+ D
Sbjct 303 IFD 305
> mmu:72935 Ddx41, 2900024F02Rik, AA958953, ABS, AI324246; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 41 (EC:3.6.4.13); K13116
ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
Length=622
Score = 286 bits (732), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/279 (50%), Positives = 191/279 (68%), Gaps = 2/279 (0%)
Query 39 TLLATSRKLRQEAEKNKKDVVQEIEEEEQRILEQVSKSLGAPLQGVRERAKGIVYSKRMA 98
+LL + L+++AE K+ ++ +EE++ILE V++ G L V+E AKGI Y +
Sbjct 86 SLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAE--GRALMSVKEMAKGITYDDPIK 143
Query 99 TSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITA 158
TSWT P M+E + VR+++ + V G +PPP ++FK+M FP IL LKKK I
Sbjct 144 TSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILH 203
Query 159 PTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVV 218
PT IQ+QGIP +L GRD+IGIAFTGSGKTLVFTLP++M LE E R P+ EGP+GL++
Sbjct 204 PTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLII 263
Query 219 CPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGR 278
CPSRELA QT ++ ++ L E P LRC IGG+S +EQ IR+GVH +VATPGR
Sbjct 264 CPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGR 323
Query 279 LTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVL 317
L D+L K+ + L+ CRYLA DEADRM+DMGFE ++R +
Sbjct 324 LMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIF 362
> hsa:51428 DDX41, ABS, MGC8828; DEAD (Asp-Glu-Ala-Asp) box polypeptide
41 (EC:3.6.4.13); K13116 ATP-dependent RNA helicase
DDX41 [EC:3.6.4.13]
Length=622
Score = 286 bits (732), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 141/279 (50%), Positives = 191/279 (68%), Gaps = 2/279 (0%)
Query 39 TLLATSRKLRQEAEKNKKDVVQEIEEEEQRILEQVSKSLGAPLQGVRERAKGIVYSKRMA 98
+LL + L+++AE K+ ++ +EE++ILE V++ G L V+E AKGI Y +
Sbjct 86 SLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAE--GRALMSVKEMAKGITYDDPIK 143
Query 99 TSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITA 158
TSWT P M+E + VR+++ + V G +PPP ++FK+M FP IL LKKK I
Sbjct 144 TSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHH 203
Query 159 PTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVV 218
PT IQ+QGIP +L GRD+IGIAFTGSGKTLVFTLP++M LE E R P+ EGP+GL++
Sbjct 204 PTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLII 263
Query 219 CPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGR 278
CPSRELA QT ++ ++ L E P LRC IGG+S +EQ IR+GVH +VATPGR
Sbjct 264 CPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGR 323
Query 279 LTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVL 317
L D+L K+ + L+ CRYLA DEADRM+DMGFE ++R +
Sbjct 324 LMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIF 362
> ath:AT4G33370 DEAD-box protein abstrakt, putative
Length=542
Score = 282 bits (722), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 133/257 (51%), Positives = 178/257 (69%), Gaps = 2/257 (0%)
Query 62 IEEEEQRILEQVSKSLGAPLQGVRERAKGIVYSKRMATSWTMPSKYREMTEAEAQEVRER 121
+EE + ++E +S L V E A+GI Y++ ++T W P R+M+ + +R++
Sbjct 25 VEEPGKGMMEHLSDK--KKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQ 82
Query 122 FFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPALLQGRDLIGIAF 181
+ + VNG D+PPP +NF DM FP P+L LK K I PT IQ+QG+P +L GRD+IGIAF
Sbjct 83 WHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAF 142
Query 182 TGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQTTDVVNFFATALHE 241
TGSGKTLVF LPM++ AL+ E+ P AGEGP LV+CPSRELA QT DVV F +L E
Sbjct 143 TGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVE 202
Query 242 GGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMGLNQCRYLAFDEA 301
GYP+LR L IGGV + Q ++ GVH VVATPGRL D+L K++M L+ CR L DEA
Sbjct 203 DGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEA 262
Query 302 DRMVDMGFEEEVRNVLD 318
DR+VD+GFE+++R+V D
Sbjct 263 DRLVDLGFEDDIRHVFD 279
> tpv:TP02_0316 RNA helicase-1; K13116 ATP-dependent RNA helicase
DDX41 [EC:3.6.4.13]
Length=598
Score = 257 bits (657), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 119/268 (44%), Positives = 172/268 (64%), Gaps = 10/268 (3%)
Query 60 QEIEEEEQRILEQVSKSLGAPLQGVRERAKGIVYSKRMATSWTMPSKYREMTEAEAQEVR 119
+ ++ +E ++ V+ S+ + L V++ K IVY + + + +PSKY + VR
Sbjct 116 ENMQIKENNLIGSVTGSINSALSPVKDSPKAIVYKSPIDSIYKIPSKYLTIDPNVVDSVR 175
Query 120 ERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPALLQGRDLIGI 179
+DV+G VPPP F+DM P+PIL AL+ K I PT+IQMQ +PA+L GRD+IGI
Sbjct 176 NALVIDVSGDQVPPPILTFEDMKLPRPILKALRHKKIFEPTKIQMQAMPAVLLGRDVIGI 235
Query 180 A----------FTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQTT 229
+ F G+GKTLVF +PM+M + E E+R P EGP+GLV+CPSRELASQ
Sbjct 236 SPTGTLTKFNLFLGTGKTLVFVIPMIMQSWEIELRLPIEPREGPFGLVICPSRELASQIY 295
Query 230 DVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMG 289
D+ +FA + + P+L C C+IGG ++Q I++GVH V+ATPGRL LN R +
Sbjct 296 DITKYFAEYISKYDRPKLYCACVIGGTGIKDQEHSIKSGVHMVIATPGRLNYFLNSRIIN 355
Query 290 LNQCRYLAFDEADRMVDMGFEEEVRNVL 317
L QCRYL FDEADR++D+GF+ E++++
Sbjct 356 LTQCRYLCFDEADRIIDLGFDSEIKSIF 383
> cel:H27M09.1 hypothetical protein; K13116 ATP-dependent RNA
helicase DDX41 [EC:3.6.4.13]
Length=630
Score = 243 bits (620), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 180/282 (63%), Gaps = 5/282 (1%)
Query 37 RKTLLATSRKLRQEAEKNKKDVVQEIEEEEQRILEQVSKSLGAPLQGVRERAKGIVYSKR 96
RKTLL ++ + + Q +EEEE +L++V++ G L V E KG Y +
Sbjct 94 RKTLLEKHAEIMETQGVIDESERQLMEEEE--LLDKVTR--GGGLLAVAELTKGEKYEEP 149
Query 97 MATSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKK-KN 155
+ T+W P R ++ + + R+R + G +PPP +F +M FP+ +L+ ++K K
Sbjct 150 IVTAWRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKG 209
Query 156 ITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWG 215
I PT IQ+QGIP L GRD+IGIA TGSGKT+ F LP++M LE EM+ P++ EGP+G
Sbjct 210 IVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFG 269
Query 216 LVVCPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVAT 275
L++ PSRELA Q D++ AL + G P++R IGGV EQA +R+G+H VVAT
Sbjct 270 LIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVAT 329
Query 276 PGRLTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVL 317
PGRL+DML K+ + L CRYL DEADRM+DMGFE+E++++
Sbjct 330 PGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIF 371
> dre:394020 ddx41, MGC55896, wu:fb92e02, zgc:55896; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 41 (EC:3.6.4.13); K13116 ATP-dependent
RNA helicase DDX41 [EC:3.6.4.13]
Length=306
Score = 213 bits (542), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 151/231 (65%), Gaps = 2/231 (0%)
Query 39 TLLATSRKLRQEAEKNKKDVVQEIEEEEQRILEQVSKSLGAPLQGVRERAKGIVYSKRMA 98
+LL + L+++A+ K+ ++ +EE++ILE V++ G L V+E AKGI Y +
Sbjct 77 SLLDQHQHLKEKADARKESAKEKQLKEEEKILESVAE--GRALMSVKEMAKGITYEDPIK 134
Query 99 TSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITA 158
TSW P M + R+++ + V G +P P ++F++M FPQ IL LKKK I
Sbjct 135 TSWNAPRYILSMPAVRHERARKKYHILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVH 194
Query 159 PTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVV 218
PT IQ+QGIP +L GRD+IGIAFTGSGKTLVFTLP++M LE E R P+ EGP+GL++
Sbjct 195 PTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLII 254
Query 219 CPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGV 269
CPSRELA QT ++ ++ L + G PQ+RC IGG+S +EQ +++GV
Sbjct 255 CPSRELARQTHGIIEYYCKLLEDEGAPQMRCALCIGGMSVKEQMEVVKHGV 305
> tpv:TP04_0265 small nuclear ribonucleoprotein; K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=744
Score = 177 bits (449), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 131/226 (57%), Gaps = 7/226 (3%)
Query 94 SKRMATSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKK 153
S+ ++ WT K EMTE + + RE F + + G VPPP R + + P +L+A+KK
Sbjct 288 SEVLSNHWTK-KKLSEMTERDWRIFREDFEIYIKGGRVPPPIRTWAESPLPWELLEAIKK 346
Query 154 KNITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGP 213
PT IQMQ IP L+ RDLIGIA TGSGKT F LPML + + +GP
Sbjct 347 AGYIKPTPIQMQAIPIALEMRDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLDDETSLDGP 406
Query 214 WGLVVCPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVV 273
+ LV+ PSRELA Q D F+ + R + ++GG + + QA +R G ++
Sbjct 407 YALVLAPSRELALQIYDETVKFS------AFCSCRSVAVVGGRNAETQAFELRKGCEIII 460
Query 274 ATPGRLTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLDC 319
TPGR+ D L++ L+QC Y+ DEADRM+DMGFE+ ++ +LDC
Sbjct 461 GTPGRVKDCLDRAYTVLSQCNYVILDEADRMIDMGFEDVLKYILDC 506
> tgo:TGME49_098020 DEAD-box ATP-dependent RNA helicase, putative
(EC:2.7.11.25); K12858 ATP-dependent RNA helicase DDX23/PRP28
[EC:3.6.4.13]
Length=1158
Score = 174 bits (440), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 126/228 (55%), Gaps = 27/228 (11%)
Query 101 WTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPT 160
WT K EM E + + RE F + + G VPPP R + + P +++A+K N PT
Sbjct 703 WTT-KKREEMNERDWRIFREDFEIYIKGGRVPPPIRTWAESALPWELIEAVKHANYDRPT 761
Query 161 QIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAG---------- 210
IQMQ IP L+ RDLIGIA TGSGKT F LPML Y+ G
Sbjct 762 PIQMQAIPIALEQRDLIGIAETGSGKTAAFVLPMLT----------YVKGLPPLNEDTGQ 811
Query 211 EGPWGLVVCPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVH 270
+GP+ L++ PSRELA Q + FA+ + + + + ++GG S + QA +R G
Sbjct 812 DGPYALILAPSRELALQIDEETQKFAS------FCKCQTVAVVGGRSAETQAFQLRRGAE 865
Query 271 CVVATPGRLTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
V+ TPGR+ D L K LNQC Y+ DEADRM+DMGFEE V +LD
Sbjct 866 IVIGTPGRVKDCLEKAYTVLNQCNYVVLDEADRMIDMGFEEIVNFILD 913
> bbo:BBOV_II003280 18.m06276; DEAD box RNA helicase; K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=714
Score = 173 bits (439), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 125/221 (56%), Gaps = 7/221 (3%)
Query 99 TSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITA 158
T W+ +K MT+ + + RE F + V GT VPPP R + + P +L A+K +
Sbjct 261 THWSAKTK-ENMTQRDWRIFREDFDIYVKGTRVPPPMRTWAESNLPSELLRAIKDAGFKS 319
Query 159 PTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVV 218
PT IQMQ IP L RDLIG+A TGSGKT+ F LPML + +GP+ L +
Sbjct 320 PTPIQMQAIPIGLGMRDLIGLAETGSGKTVAFVLPMLTYVKALPPLNEDTLQDGPYALTL 379
Query 219 CPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGR 278
P+RELA+Q A + + R + ++GG S +Q +RNG V+ TPGR
Sbjct 380 APTRELATQ------IHAETVKFSAFCSCRTVLVVGGHSVDQQGFELRNGAEIVIGTPGR 433
Query 279 LTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLDC 319
+ D L++ L QC Y+ DEADRM+DMGFEE V ++LDC
Sbjct 434 IKDCLDRSYTVLTQCNYVILDEADRMIDMGFEEIVNDILDC 474
> ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=733
Score = 170 bits (431), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 151/277 (54%), Gaps = 13/277 (4%)
Query 45 RKLRQEAEKNKKDVVQEIEEEEQRILEQVSKSLGAPLQGVRERAKGIV--YSKRMATSWT 102
R+ +++A K++K++ EI +++ V K A Q VRE A + R+ W+
Sbjct 225 REQKKQAAKHEKEMRDEIRKKDG----IVEKPEEAAAQRVREEAADTYDSFDMRVDRHWS 280
Query 103 MPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQI 162
+ EMTE + + RE F + G+ +P P R++++ +L A+++ P+ I
Sbjct 281 -DKRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPI 339
Query 163 QMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSR 222
QM IP LQ RD+IGIA TGSGKT F LPML S EGP+ +V+ P+R
Sbjct 340 QMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTR 399
Query 223 ELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDM 282
ELA Q + FA H G+ R ++GG S +EQ I G V+ATPGRL D
Sbjct 400 ELAQQIEEETVKFA---HYLGF---RVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDC 453
Query 283 LNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLDC 319
L +R LNQC Y+ DEADRM+DMGFE +V VLD
Sbjct 454 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDA 490
> cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member
(ddx-23); K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=730
Score = 170 bits (430), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 129/219 (58%), Gaps = 8/219 (3%)
Query 101 WTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPT 160
W M + EM++ + + RE F + + G VP P RN+++ FP + A+K+ PT
Sbjct 267 WRM-KELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPT 325
Query 161 QIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALE-SEMRSPYIAGEGPWGLVVC 219
IQ Q IP LQ RD+IG+A TGSGKT F LP+L+ +M GP+ +++
Sbjct 326 PIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMA 385
Query 220 PSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRL 279
P+RELA Q + N F L ++ + +IGG S ++Q +R GV V+ATPGRL
Sbjct 386 PTRELAQQIEEETNKFGKLLG------IKTVSVIGGASREDQGMKLRMGVEVVIATPGRL 439
Query 280 TDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
D+L R + LNQC Y+ DEADRM+DMGFE +V+ VL+
Sbjct 440 LDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLE 478
> pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA
helicase DDX23/PRP28 [EC:3.6.4.13]
Length=1123
Score = 169 bits (428), Expect = 1e-41, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 127/218 (58%), Gaps = 7/218 (3%)
Query 101 WTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPT 160
W+ S+ EMT+ + + RE + + G VPPP R +++ +L A+KK PT
Sbjct 664 WSQKSR-EEMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPT 722
Query 161 QIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCP 220
IQMQ IP L+ RDLIGIA TGSGKT F LPML + + + +GP+ LV+ P
Sbjct 723 PIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAP 782
Query 221 SRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLT 280
SRELA Q + N FA+ Y R + ++GG + + QA +R GV V+ TPGRL
Sbjct 783 SRELAIQIYEETNKFAS------YCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQ 836
Query 281 DMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
D L K LNQC Y+ DEADRM+DMGFE+ V +LD
Sbjct 837 DCLEKAYTVLNQCNYVILDEADRMMDMGFEDTVHYILD 874
> ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=501
Score = 167 bits (422), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 123/208 (59%), Gaps = 9/208 (4%)
Query 110 MTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPA 169
MT+ E +E R+ + V G D+P P ++F+D+ FP +L+ +KK T PT IQ QG P
Sbjct 73 MTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPM 132
Query 170 LLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQTT 229
++GRDLIGIA TGSGKTL + LP ++ M + G+GP LV+ P+RELA Q
Sbjct 133 AMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLA---HGDGPIVLVLAPTRELAVQIQ 189
Query 230 DVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMG 289
+ F G +++ C+ GGV Q ++ GV V+ATPGRL DM+
Sbjct 190 QEASKF------GSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTN 243
Query 290 LNQCRYLAFDEADRMVDMGFEEEVRNVL 317
L + YL DEADRM+DMGF+ ++R ++
Sbjct 244 LRRVTYLVLDEADRMLDMGFDPQIRKIV 271
> dre:334283 ddx23, wu:fi39b12, zgc:63742; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 23 (EC:3.6.1.-); K12858 ATP-dependent RNA
helicase DDX23/PRP28 [EC:3.6.4.13]
Length=807
Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 147/265 (55%), Gaps = 23/265 (8%)
Query 55 KKDVVQEIEEEEQRILEQVSKSLGAPLQGVRERAKGIVYSKRMATSWTMPSKYREMTEAE 114
K+ +E E+EEQR L+ VR++ + R W+ K EMT+ +
Sbjct 313 KRRTNEEKEQEEQR------------LKKVRKKEAKQRWDDR---HWSQ-KKLDEMTDRD 356
Query 115 AQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPALLQGR 174
+ RE + + G +P P RN+K+ P IL+ ++K PT IQ Q IP LQ R
Sbjct 357 WRIFREDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNR 416
Query 175 DLIGIAFTGSGKTLVFTLPMLMGALE-SEMRSPYIAGEGPWGLVVCPSRELASQTTDVVN 233
D+IG+A TGSGKT F +P+L+ ++ + +GP+ +++ P+RELA Q +
Sbjct 417 DIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAIILAPTRELAQQIEEETI 476
Query 234 FFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMGLNQC 293
F L +R + +IGG+S ++Q +R G V+ATPGRL D+L R + L++C
Sbjct 477 KFGKPLG------IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRC 530
Query 294 RYLAFDEADRMVDMGFEEEVRNVLD 318
Y+ DEADRM+DMGFE +V+ +L+
Sbjct 531 TYVVLDEADRMIDMGFEPDVQKILE 555
> cpv:cgd3_3690 U5 snRNP 100 kD protein ; K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=529
Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 2/212 (0%)
Query 107 YREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQG 166
Y +MTE + + RE + ++V G DVP P RN+KD + + ++ PT IQMQ
Sbjct 113 YFDMTERDWKIFREDYSINVRGKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQC 172
Query 167 IPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELAS 226
IP L+ RD+IGIA TGSGKT+ F +P++ + + EGP+GL++ P+RELA
Sbjct 173 IPIGLKLRDMIGIAETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELAL 232
Query 227 QTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKR 286
Q D HE ++R L ++GG + +QA +R GV ++ATPGR+ D L K
Sbjct 233 QIEDEAQKLLNKTHE--LKRIRTLSIVGGRNIDQQAFSLRKGVEIIIATPGRMQDCLEKT 290
Query 287 RMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
L QC Y+ DEADRM+D+GF++ + +LD
Sbjct 291 LTVLVQCSYVILDEADRMIDLGFQDSLNFILD 322
> hsa:9416 DDX23, MGC8416, PRPF28, U5-100K, U5-100KD, prp28; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 23 (EC:3.6.4.13); K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=820
Score = 163 bits (413), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 145/259 (55%), Gaps = 20/259 (7%)
Query 65 EEQRILEQVSKSLGAPLQGVRERAKGIVYSKRMATSWTMPSKYREMTEAEAQEVRERFFV 124
E++R LE+ + A L+ +R++ + R W+ K EMT+ + + RE + +
Sbjct 325 EKRRTLEEKEQE-EARLRKLRKKEAKQRWDDR---HWSQ-KKLDEMTDRDWRIFREDYSI 379
Query 125 DVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPALLQGRDLIGIAFTGS 184
G +P P R++KD P IL+ + K PT IQ Q IP LQ RD+IG+A TGS
Sbjct 380 TTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGS 439
Query 185 GKTLVFTLPMLMGALESEMRSPYI-----AGEGPWGLVVCPSRELASQTTDVVNFFATAL 239
GKT F +P+L+ P I + +GP+ +++ P+RELA Q + F L
Sbjct 440 GKTAAFLIPLLVWITTL----PKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPL 495
Query 240 HEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMGLNQCRYLAFD 299
+R + +IGG+S ++Q +R G V+ATPGRL D+L R + L++C Y+ D
Sbjct 496 G------IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLD 549
Query 300 EADRMVDMGFEEEVRNVLD 318
EADRM+DMGFE +V+ +L+
Sbjct 550 EADRMIDMGFEPDVQKILE 568
> mmu:74351 Ddx23, 3110082M05Rik, 4921506D17Rik; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 23 (EC:3.6.1.-); K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=819
Score = 163 bits (412), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 145/259 (55%), Gaps = 20/259 (7%)
Query 65 EEQRILEQVSKSLGAPLQGVRERAKGIVYSKRMATSWTMPSKYREMTEAEAQEVRERFFV 124
E++R LE+ + A L+ +R++ + R W+ K EMT+ + + RE + +
Sbjct 324 EKRRTLEEKEQE-EARLRKLRKKEAKQRWDDR---HWSQ-KKLDEMTDRDWRIFREDYSI 378
Query 125 DVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPALLQGRDLIGIAFTGS 184
G +P P R++KD P IL+ + K PT IQ Q IP LQ RD+IG+A TGS
Sbjct 379 TTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGS 438
Query 185 GKTLVFTLPMLMGALESEMRSPYI-----AGEGPWGLVVCPSRELASQTTDVVNFFATAL 239
GKT F +P+L+ P I + +GP+ +++ P+RELA Q + F L
Sbjct 439 GKTAAFLIPLLVWITTL----PKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPL 494
Query 240 HEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMGLNQCRYLAFD 299
+R + +IGG+S ++Q +R G V+ATPGRL D+L R + L++C Y+ D
Sbjct 495 G------IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLD 548
Query 300 EADRMVDMGFEEEVRNVLD 318
EADRM+DMGFE +V+ +L+
Sbjct 549 EADRMIDMGFEPDVQKILE 567
> dre:556764 similar to Probable RNA-dependent helicase p72 (DEAD-box
protein p72) (DEAD-box protein 17); K13178 ATP-dependent
RNA helicase DDX17 [EC:3.6.4.13]
Length=671
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 11/212 (5%)
Query 108 REMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGI 167
M++ + +E R + + V G+ P P NF FPQ ++D L ++N PT IQ QG
Sbjct 67 HHMSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGF 126
Query 168 PALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIA-GEGPWGLVVCPSRELAS 226
P L GRD++GIA TGSGKTL + LP A+ PY+ G+GP LV+ P+RELA
Sbjct 127 PLALSGRDMVGIAQTGSGKTLAYLLP----AIVHINHQPYLERGDGPICLVLAPTRELAQ 182
Query 227 QTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKR 286
Q V A G +++ C+ GG Q + GV +ATPGRL D L
Sbjct 183 QVQQV------AFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVG 236
Query 287 RMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
+ L +C YL DEADRM+DMGFE ++R ++D
Sbjct 237 KTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 268
> ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=760
Score = 160 bits (404), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 11/209 (5%)
Query 110 MTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPA 169
MTE E + R+R + V+G DV P + F+D F I+ A+KK+ PT IQ Q +P
Sbjct 202 MTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPI 261
Query 170 LLQGRDLIGIAFTGSGKTLVFTLPMLMGALES-EMRSPYIAGEGPWGLVVCPSRELASQT 228
+L GRD+IGIA TGSGKT F LPM++ ++ E++ EGP G++ P+RELA Q
Sbjct 262 VLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQR----DEGPIGVICAPTRELAHQI 317
Query 229 TDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRM 288
F+ A LR + GG+S EQ ++ G VVATPGRL DML + +
Sbjct 318 FLEAKKFSKAYG------LRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKAL 371
Query 289 GLNQCRYLAFDEADRMVDMGFEEEVRNVL 317
+ + YL DEADRM D+GFE +VR+++
Sbjct 372 TMMRASYLVLDEADRMFDLGFEPQVRSIV 400
> xla:398649 ddx17, MGC80019; DEAD (Asp-Glu-Ala-Asp) box polypeptide
17; K13178 ATP-dependent RNA helicase DDX17 [EC:3.6.4.13]
Length=610
Score = 160 bits (404), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 117/210 (55%), Gaps = 11/210 (5%)
Query 110 MTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPA 169
MT+ + +E+R + + + G + P P F FPQ +LD L + PT IQ QG P
Sbjct 56 MTQHDVEELRRKKEITIRGVNCPKPLYAFHQANFPQYVLDVLLDQRFKEPTPIQCQGFPL 115
Query 170 LLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIA-GEGPWGLVVCPSRELASQT 228
L GRD++GIA TGSGKTL + LP A+ PY+ G+GP LV+ P+RELA Q
Sbjct 116 ALSGRDMVGIAQTGSGKTLAYLLP----AMVHINHQPYLERGDGPICLVLAPTRELAQQV 171
Query 229 TDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRM 288
V + + G +L+ C+ GG Q + GV +ATPGRL D L +
Sbjct 172 QQVADDY------GKTSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKT 225
Query 289 GLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
L +C YL DEADRM+DMGFE ++R ++D
Sbjct 226 NLRRCTYLVLDEADRMLDMGFEPQIRKIVD 255
> mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C80929,
Gm926, MGC79147, p72; DEAD (Asp-Glu-Ala-Asp) box polypeptide
17 (EC:3.6.4.13); K13178 ATP-dependent RNA helicase DDX17
[EC:3.6.4.13]
Length=650
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 118/211 (55%), Gaps = 12/211 (5%)
Query 110 MTEAEAQEVRERFFVDVNGTDV-PPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIP 168
+T E E+R + + V G DV P P F FPQ ++D L ++ T PT IQ QG P
Sbjct 65 LTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFP 124
Query 169 ALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIA-GEGPWGLVVCPSRELASQ 227
L GRD++GIA TGSGKTL + LP A+ PY+ G+GP LV+ P+RELA Q
Sbjct 125 LALSGRDMVGIAQTGSGKTLAYLLP----AIVHINHQPYLERGDGPICLVLAPTRELAQQ 180
Query 228 TTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRR 287
V + + G +L+ C+ GG Q + GV +ATPGRL D L +
Sbjct 181 VQQVADDY------GKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGK 234
Query 288 MGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
L +C YL DEADRM+DMGFE ++R ++D
Sbjct 235 TNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 265
> hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 17 (EC:3.6.4.13); K13178 ATP-dependent
RNA helicase DDX17 [EC:3.6.4.13]
Length=731
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 118/211 (55%), Gaps = 12/211 (5%)
Query 110 MTEAEAQEVRERFFVDVNGTDV-PPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIP 168
+T E E+R + + V G DV P P F FPQ ++D L ++ T PT IQ QG P
Sbjct 144 LTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFP 203
Query 169 ALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIA-GEGPWGLVVCPSRELASQ 227
L GRD++GIA TGSGKTL + LP A+ PY+ G+GP LV+ P+RELA Q
Sbjct 204 LALSGRDMVGIAQTGSGKTLAYLLP----AIVHINHQPYLERGDGPICLVLAPTRELAQQ 259
Query 228 TTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRR 287
V + + G +L+ C+ GG Q + GV +ATPGRL D L +
Sbjct 260 VQQVADDY------GKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGK 313
Query 288 MGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
L +C YL DEADRM+DMGFE ++R ++D
Sbjct 314 TNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 344
> xla:399382 ddx5, MGC81559; DEAD (Asp-Glu-Ala-Asp) box polypeptide
5; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=608
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 117/209 (55%), Gaps = 11/209 (5%)
Query 111 TEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPAL 170
T E + R + V G + P P NF + FP +++A+K++N T PT IQ QG P
Sbjct 67 TPQECDQYRRSKEITVRGINCPKPILNFNEASFPANVMEAIKRQNFTEPTPIQGQGWPVA 126
Query 171 LQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIA-GEGPWGLVVCPSRELASQTT 229
L G D++G+A TGSGKTL + LP ++ P++ G+GP LV+ P+RELA Q
Sbjct 127 LSGLDMVGVAMTGSGKTLSYLLPGIVHI----NHQPFLQRGDGPILLVLAPTRELAQQVQ 182
Query 230 DVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMG 289
V + A +LR C+ GG Q + GV +ATPGRL D L +
Sbjct 183 QVAAEYGRAC------RLRSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTN 236
Query 290 LNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
LN+C YL DEADRM+DMGFE ++R ++D
Sbjct 237 LNRCTYLVLDEADRMLDMGFEPQIRKIVD 265
> dre:503932 ddx42, im:7148194, zgc:111815; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 42 (EC:3.6.1.-); K12835 ATP-dependent RNA
helicase DDX42 [EC:3.6.4.13]
Length=908
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 121/226 (53%), Gaps = 9/226 (3%)
Query 91 IVYSKRMATSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDA 150
I YS + + +T AE E+R + + V+G P P +F F + ++
Sbjct 210 IDYSPFEKNFYNEHEEISSLTGAEVVELRRKLNLKVSGAAPPKPATSFAHFGFDEQLMHQ 269
Query 151 LKKKNITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAG 210
++K T PT IQ QG+P L GRD IGIA TGSGKT F P+L+ ++ + P G
Sbjct 270 IRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEP---G 326
Query 211 EGPWGLVVCPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVH 270
EGP ++VCP+REL Q F A LR + + GG S EQA ++ G
Sbjct 327 EGPIAVIVCPTRELCQQIHAECKRFGKAY------GLRSVAVYGGGSMWEQAKALQEGAE 380
Query 271 CVVATPGRLTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNV 316
VV TPGRL D + K+ L + +L FDEADRM DMGFE +VR++
Sbjct 381 IVVCTPGRLIDHVKKKATSLQRVTFLVFDEADRMFDMGFEYQVRSI 426
> ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putative
(RH30)
Length=484
Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 117/209 (55%), Gaps = 11/209 (5%)
Query 110 MTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPA 169
MTE + R + V G DVP P + F+D FP IL+A+ K T PT IQ QG P
Sbjct 139 MTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPM 198
Query 170 LLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIA-GEGPWGLVVCPSRELASQT 228
L+GRDLIGIA TGSGKTL + LP AL P + +GP L++ P+RELA Q
Sbjct 199 ALKGRDLIGIAETGSGKTLAYLLP----ALVHVSAQPRLGQDDGPIVLILAPTRELAVQI 254
Query 229 TDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRM 288
+ F L G +R C+ GG Q +R GV V+ATPGRL DML +
Sbjct 255 QEESRKF--GLRSG----VRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHT 308
Query 289 GLNQCRYLAFDEADRMVDMGFEEEVRNVL 317
L + YL DEADRM+DMGFE ++R ++
Sbjct 309 NLKRVTYLVLDEADRMLDMGFEPQIRKIV 337
> hsa:11325 DDX42, FLJ43179, RHELP, RNAHP, SF3b125; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 42 (EC:3.6.4.13); K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=938
Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 121/215 (56%), Gaps = 12/215 (5%)
Query 105 SKYREMTEAEAQ---EVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQ 161
+++ E+T Q ++R + + V+G P P +F F + ++ ++K T PT
Sbjct 219 NEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTP 278
Query 162 IQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPS 221
IQ QG+P L GRD+IGIA TGSGKT F PML+ ++ + P G+GP ++VCP+
Sbjct 279 IQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP---GDGPIAVIVCPT 335
Query 222 RELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTD 281
REL Q F A + LR + + GG S EQA ++ G VV TPGRL D
Sbjct 336 RELCQQIHAECKRFGKAYN------LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLID 389
Query 282 MLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNV 316
+ K+ L + YL FDEADRM DMGFE +VR++
Sbjct 390 HVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSI 424
> dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1018
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 116/213 (54%), Gaps = 13/213 (6%)
Query 110 MTEAEAQEVR-ERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIP 168
M+ E E R E + V G P P + + +L+ALKK N PT IQ Q IP
Sbjct 313 MSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIP 372
Query 169 ALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQT 228
A++ GRDLIGIA TGSGKT+ F LPM L+ + P EGP +++ P+RELA Q
Sbjct 373 AIMSGRDLIGIAKTGSGKTIAFLLPMFRHILD---QRPVGEAEGPLAVIMTPTRELALQI 429
Query 229 TDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDML---NK 285
T F+ +L LR +C+ GG EQ ++ G +V TPGR+ DML N
Sbjct 430 TKECKKFSKSL------ALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNG 483
Query 286 RRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
R L + Y+ DEADRM DMGFE +V ++D
Sbjct 484 RVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVD 516
> mmu:72047 Ddx42, 1810047H21Rik, AW319508, AW556242, B430002H05Rik,
RHELP, RNAHP, SF3b125; DEAD (Asp-Glu-Ala-Asp) box polypeptide
42 (EC:3.6.4.13); K12835 ATP-dependent RNA helicase
DDX42 [EC:3.6.4.13]
Length=929
Score = 157 bits (397), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 121/215 (56%), Gaps = 12/215 (5%)
Query 105 SKYREMTEAEAQ---EVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQ 161
+++ E+T Q ++R + + V+G P P +F F + ++ ++K T PT
Sbjct 219 NEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTP 278
Query 162 IQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPS 221
IQ QG+P L GRD+IGIA TGSGKT F PML+ ++ + P G+GP ++VCP+
Sbjct 279 IQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP---GDGPIAVIVCPT 335
Query 222 RELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTD 281
REL Q F A + LR + + GG S EQA ++ G VV TPGRL D
Sbjct 336 RELCQQIHAECKRFGKAYN------LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLID 389
Query 282 MLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNV 316
+ K+ L + YL FDEADRM DMGFE +VR++
Sbjct 390 HVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSI 424
> xla:444634 MGC84147 protein
Length=450
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 120/218 (55%), Gaps = 15/218 (6%)
Query 107 YREMTEAEAQ------EVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPT 160
Y E E +Q E+R + + V+G P +F F + ++ ++K T PT
Sbjct 216 YEEHEEITSQTPQQITELRHKLNLRVSGAAAPRLCSSFAHFGFDEQLMHQIRKSEYTKPT 275
Query 161 QIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCP 220
IQ QGIP L GRD+IGIA TGSGKT F P+L+ ++ + P G+GP ++VCP
Sbjct 276 PIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQP---GDGPIAVIVCP 332
Query 221 SRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLT 280
+REL Q + F A + LR + + GG S EQA ++ G VV TPGRL
Sbjct 333 TRELCQQIHNECKRFGKAYN------LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLI 386
Query 281 DMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
D + K+ L + YL FDEADRM DMGFE +VR+V +
Sbjct 387 DHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSVAN 424
> xla:379390 MGC53795; similar to DEAD/H (Asp-Glu-Ala-Asp/His)
box polypeptide 5 (RNA helicase, 68kDa); K12823 ATP-dependent
RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=607
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 115/209 (55%), Gaps = 11/209 (5%)
Query 111 TEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPAL 170
T E + R + V G + P P NF + FP +++ +K+ N T PT IQ QG P
Sbjct 65 TPQECDQYRRSKEITVRGLNCPKPVLNFHEASFPANVMEVIKRLNFTEPTPIQGQGWPVA 124
Query 171 LQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIA-GEGPWGLVVCPSRELASQTT 229
L G D++G+A TGSGKTL + LP ++ P++ G+GP LV+ P+RELA Q
Sbjct 125 LSGLDMVGVAMTGSGKTLSYLLPGIVHI----NHQPFLQRGDGPILLVLAPTRELAQQVQ 180
Query 230 DVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMG 289
V + A +LR C+ GG Q + GV +ATPGRL D L +
Sbjct 181 QVAAEYGRAC------RLRTTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTN 234
Query 290 LNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
LN+C YL DEADRM+DMGFE ++R ++D
Sbjct 235 LNRCTYLVLDEADRMLDMGFEPQIRKIVD 263
> sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=546
Score = 154 bits (389), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 121/211 (57%), Gaps = 9/211 (4%)
Query 108 REMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGI 167
R+ +++E + R+ + ++G D+P P F + FP +L+ +K + PT IQ QG
Sbjct 85 RDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGW 144
Query 168 PALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQ 227
P L GRD++GIA TGSGKTL + LP ++ + +P G+GP LV+ P+RELA Q
Sbjct 145 PMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAP---GDGPIVLVLAPTRELAVQ 201
Query 228 TTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRR 287
+ F G ++R C+ GGV +Q + G V+ATPGRL DML +
Sbjct 202 IQTECSKF------GHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGK 255
Query 288 MGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
L + YL DEADRM+DMGFE ++R ++D
Sbjct 256 TNLKRVTYLVLDEADRMLDMGFEPQIRKIVD 286
> dre:322206 ddx5, wu:fa56a07, wu:fb11e01, wu:fb16c10, wu:fb53b05;
DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.1.-);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=518
Score = 154 bits (388), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 114/206 (55%), Gaps = 11/206 (5%)
Query 114 EAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPALLQG 173
E + R + V G D P P F + FP+ ++D + K+N T PT IQ QG P L G
Sbjct 74 EVEHYRRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSG 133
Query 174 RDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYI-AGEGPWGLVVCPSRELASQTTDVV 232
+D++GIA TGSGKTL + LP A+ P++ G+GP LV+ P+RELA Q V
Sbjct 134 KDMVGIAQTGSGKTLSYLLP----AIVHINHQPFLEHGDGPICLVLAPTRELAQQVQQV- 188
Query 233 NFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMGLNQ 292
A G +++ C+ GG Q + GV +ATPGRL D L + L +
Sbjct 189 -----AAEYGKASRIKSTCIYGGAPQGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRR 243
Query 293 CRYLAFDEADRMVDMGFEEEVRNVLD 318
C YL DEADRM+DMGFE ++R ++D
Sbjct 244 CTYLVLDEADRMLDMGFEPQIRKIVD 269
> pfa:PF14_0437 helicase, putative
Length=527
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 123/211 (58%), Gaps = 10/211 (4%)
Query 109 EMTEAEAQEVRERFFVDV-NGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGI 167
+++ E +E+R++ + + G +VP P + + FP ++ +LK NI APT IQ+QG
Sbjct 85 KLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGW 144
Query 168 PALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQ 227
P L G+D+IG A TGSGKTL F LP + L ++ Y G+GP LV+ P+RELA Q
Sbjct 145 PIALSGKDMIGKAETGSGKTLAFILPAFVHIL-AQPNLKY--GDGPIVLVLAPTRELAEQ 201
Query 228 TTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRR 287
F+T ++R C GGV Q ++ GVH ++A PGRL D+L +
Sbjct 202 IRQECIKFSTE------SKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNV 255
Query 288 MGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
L + YL DEAD+M+DMGFE ++R ++D
Sbjct 256 TNLMRVTYLVLDEADKMLDMGFELQIRKIVD 286
> xla:380261 ddx42, MGC54025; DEAD (Asp-Glu-Ala-Asp) box polypeptide
42 (EC:3.6.4.13); K12835 ATP-dependent RNA helicase DDX42
[EC:3.6.4.13]
Length=947
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 115/208 (55%), Gaps = 9/208 (4%)
Query 111 TEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPAL 170
T + E+R + + V+G P +F F + +L ++K T PT IQ QGIP
Sbjct 225 TPQQITELRHKLNLRVSGAAPPRLCSSFAHFGFDEQLLHQIRKSEYTQPTPIQCQGIPVA 284
Query 171 LQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQTTD 230
L GRD+IGIA TGSGKT F P+L+ ++ + P +GP ++VCP+REL Q
Sbjct 285 LSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQP---ADGPIAVIVCPTRELCQQIHS 341
Query 231 VVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMGL 290
F A + LR + + GG S EQA ++ G VV TPGRL D + K+ L
Sbjct 342 ECKRFGKAYN------LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNL 395
Query 291 NQCRYLAFDEADRMVDMGFEEEVRNVLD 318
+ YL FDEADRM DMGFE +VR++ +
Sbjct 396 QRVTYLVFDEADRMFDMGFEYQVRSIAN 423
> cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA helicase
DDX46/PRP5 [EC:3.6.4.13]
Length=970
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 123/233 (52%), Gaps = 15/233 (6%)
Query 91 IVYSKRMATSWTMPSKYREMTEAEAQEVRERF-FVDVNGTDVPPPFRNFKDMCFPQPILD 149
+ Y K + + R MT+AE + RE + V G D P P + + +++
Sbjct 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query 150 ALKKKNITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYI- 208
LKK + PT IQ Q IP+++ GRD+IGIA TGSGKTL F LPM L+ P +
Sbjct 318 VLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILD----QPELE 373
Query 209 AGEGPWGLVVCPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNG 268
G+GP +++ P+RELA QT N FA L L+ C GGV EQ ++ G
Sbjct 374 EGDGPIAVILAPTRELAMQTYKEANKFAKPLG------LKVACTYGGVGISEQIADLKRG 427
Query 269 VHCVVATPGRLTDML---NKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
VV TPGR+ D+L + + L + YL DEADRM D GFE ++ V++
Sbjct 428 AEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVN 480
> tpv:TP04_0562 RNA helicase; K12823 ATP-dependent RNA helicase
DDX5/DBP2 [EC:3.6.4.13]
Length=635
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 132/245 (53%), Gaps = 12/245 (4%)
Query 74 SKSLGAPLQGVRERAKGIVYSKRMATSWTMPSKYREMTEAEAQEVRE-RFFVDVNGTDVP 132
S++LGA LQ V +V K + + + MT+ EA E+R + V+G DVP
Sbjct 149 SENLGAGLQPVNWNQIELV--KFEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVP 206
Query 133 PPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTL 192
P F+ FP+ IL +++ PT IQ+Q P L GRD+IGIA TGSGKTL F L
Sbjct 207 KPVVKFEYTSFPRYILSSIEAAGFKEPTPIQVQSWPIALSGRDMIGIAETGSGKTLAFLL 266
Query 193 PMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQTTDVVNFFATALHEGGYPQLRCLCM 252
P ++ + P G+GP LV+ P+RELA Q + TAL G +L+
Sbjct 267 PAIVHINAQALLRP---GDGPIVLVLAPTRELAEQIKE------TALVFGRSSKLKTSVA 317
Query 253 IGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEE 312
GGV + Q +R GV ++A PGRL D L L + YL DEADRM+DMGFE +
Sbjct 318 YGGVPKRFQTIALRRGVEILIACPGRLIDFLESSVTNLRRVTYLVLDEADRMLDMGFEPQ 377
Query 313 VRNVL 317
+R ++
Sbjct 378 IRKIV 382
> bbo:BBOV_II004470 18.m06373; p68-like protein; K12823 ATP-dependent
RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=529
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 120/215 (55%), Gaps = 12/215 (5%)
Query 105 SKYREMTEAEAQEVR-ERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQ 163
S+ M+ A+ VR ER + G DVP P +F+ FP IL A++ TAPT IQ
Sbjct 76 SEVSAMSSADVDRVRKEREITIIAGRDVPKPVVSFEHTSFPDYILKAIRAAGFTAPTPIQ 135
Query 164 MQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRE 223
+QG P L GRD+IGIA TGSGKTL F LP ++ + P G+GP LV+ P+RE
Sbjct 136 VQGWPIALSGRDVIGIAETGSGKTLAFLLPAVVHINAQHLLRP---GDGPIVLVLAPTRE 192
Query 224 LASQT-TDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDM 282
L Q V F A++ +++ GGV ++Q ++ GV ++A PGRL D
Sbjct 193 LVEQIRQQCVQFGASS-------RIKSSVAYGGVPKRQQMYELKRGVEILLACPGRLIDF 245
Query 283 LNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVL 317
L L + YL DEADRM+DMGFE ++R ++
Sbjct 246 LESNVTNLRRVTYLVLDEADRMLDMGFEPQIRKIV 280
> mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI957095,
MGC116676, MGC31579, mKIAA0801; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 109/198 (55%), Gaps = 12/198 (6%)
Query 124 VDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPALLQGRDLIGIAFTG 183
+ V G P P +++ IL++LKK PT IQ Q IPA++ GRDLIGIA TG
Sbjct 360 ITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTG 419
Query 184 SGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQTTDVVNFFATALHEGG 243
SGKT+ F LPM ++ + GEGP +++ P+RELA Q T F+ L
Sbjct 420 SGKTIAFLLPMFRHIMD---QRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLG--- 473
Query 244 YPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDML---NKRRMGLNQCRYLAFDE 300
LR +C+ GG EQ ++ G +V TPGR+ DML + R L + Y+ DE
Sbjct 474 ---LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDE 530
Query 301 ADRMVDMGFEEEVRNVLD 318
ADRM DMGFE +V ++D
Sbjct 531 ADRMFDMGFEPQVMRIVD 548
> hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 46 (EC:3.6.4.13); K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 109/198 (55%), Gaps = 12/198 (6%)
Query 124 VDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPALLQGRDLIGIAFTG 183
+ V G P P +++ IL++LKK PT IQ Q IPA++ GRDLIGIA TG
Sbjct 360 ITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTG 419
Query 184 SGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQTTDVVNFFATALHEGG 243
SGKT+ F LPM ++ + GEGP +++ P+RELA Q T F+ L
Sbjct 420 SGKTIAFLLPMFRHIMD---QRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLG--- 473
Query 244 YPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDML---NKRRMGLNQCRYLAFDE 300
LR +C+ GG EQ ++ G +V TPGR+ DML + R L + Y+ DE
Sbjct 474 ---LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDE 530
Query 301 ADRMVDMGFEEEVRNVLD 318
ADRM DMGFE +V ++D
Sbjct 531 ADRMFDMGFEPQVMRIVD 548
> cpv:cgd2_1010 hypothetical protein ; K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=586
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 121/211 (57%), Gaps = 14/211 (6%)
Query 110 MTEAEAQEVR-ERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIP 168
++ + ++R ER + G +VP P +F FP ++DAL + T PT IQ+QG P
Sbjct 141 LSNEQVDQIRKERKITIIAGENVPKPITSFVTSGFPNFLVDALYRTGFTEPTAIQVQGWP 200
Query 169 ALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRS-PYI-AGEGPWGLVVCPSRELAS 226
L G D+IGIA TGSGKTL F LP ++ +R+ P + G+GP LV+ P+REL
Sbjct 201 VALSGHDMIGIAETGSGKTLGFLLPAMI-----HIRAQPLLRYGDGPICLVLAPTRELVE 255
Query 227 QTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKR 286
Q + N F + +LR + GGV + Q IRNGV +A PGRL D+L +
Sbjct 256 QIREQANQFGSIF------KLRNTAIYGGVPKRPQQASIRNGVEICIACPGRLIDLLEEG 309
Query 287 RMGLNQCRYLAFDEADRMVDMGFEEEVRNVL 317
L++ YL DEADRM+DMGFE ++R ++
Sbjct 310 YTNLSRVTYLVLDEADRMLDMGFEPQIRKLV 340
> ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=828
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query 110 MTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPA 169
MT+ E R+ + V+G DVP P + + ILD +KK N P IQ Q +P
Sbjct 165 MTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPI 224
Query 170 LLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQTT 229
++ GRD IG+A TGSGKTL F LPML + + P AG+GP GLV+ P+REL Q
Sbjct 225 IMSGRDCIGVAKTGSGKTLGFVLPMLRHIKD---QPPVEAGDGPIGLVMAPTRELVQQIH 281
Query 230 DVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDML---NKR 286
+ F+ L +RC+ + GG +Q + ++ G VV TPGR+ D+L + +
Sbjct 282 SDIRKFSKPLG------IRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGK 335
Query 287 RMGLNQCRYLAFDEADRMVDMGFEEEVRNVL 317
L + +L DEADRM DMGFE ++ ++
Sbjct 336 ITNLRRVTFLVMDEADRMFDMGFEPQITRII 366
> hsa:1655 DDX5, DKFZp434E109, DKFZp686J01190, G17P1, HLR1, HUMP68,
p68; DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.4.13);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=614
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 113/209 (54%), Gaps = 11/209 (5%)
Query 111 TEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPAL 170
T E + R + V G + P P NF + FP ++D + ++N T PT IQ QG P
Sbjct 69 TAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query 171 LQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIA-GEGPWGLVVCPSRELASQTT 229
L G D++G+A TGSGKTL + LP A+ P++ G+GP LV+ P+RELA Q
Sbjct 129 LSGLDMVGVAQTGSGKTLSYLLP----AIVHINHQPFLERGDGPICLVLAPTRELAQQVQ 184
Query 230 DVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMG 289
V + A +L+ C+ GG Q + GV +ATPGRL D L +
Sbjct 185 QVAAEYCRAC------RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTN 238
Query 290 LNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
L + YL DEADRM+DMGFE ++R ++D
Sbjct 239 LRRTTYLVLDEADRMLDMGFEPQIRKIVD 267
> ath:AT3G09620 DEAD/DEAH box helicase, putative
Length=989
Score = 147 bits (370), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 115/211 (54%), Gaps = 12/211 (5%)
Query 110 MTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPA 169
MT+ R+ + V+G DVP P + + ILD LKK N P IQ Q +P
Sbjct 370 MTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPI 429
Query 170 LLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQTT 229
++ GRD IG+A TGSGKTL F LPML + + P AG+GP GLV+ P+REL Q
Sbjct 430 IMSGRDCIGVAKTGSGKTLGFVLPMLRHIKD---QPPVEAGDGPIGLVMAPTRELVQQIY 486
Query 230 DVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDML---NKR 286
+ F+ AL + C+ + GG +Q + ++ G VV TPGR+ D+L + +
Sbjct 487 SDIRKFSKALG------IICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGK 540
Query 287 RMGLNQCRYLAFDEADRMVDMGFEEEVRNVL 317
L + YL DEADRM DMGFE ++ ++
Sbjct 541 ITNLRRVTYLVMDEADRMFDMGFEPQITRIV 571
> mmu:13207 Ddx5, 2600009A06Rik, G17P1, HUMP68, Hlr1, MGC118083,
p68; DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.4.13);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=615
Score = 147 bits (370), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 112/209 (53%), Gaps = 11/209 (5%)
Query 111 TEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPAL 170
T E R + V G + P P NF + FP ++D + ++N T PT IQ QG P
Sbjct 69 TAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 128
Query 171 LQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIA-GEGPWGLVVCPSRELASQTT 229
L G D++G+A TGSGKTL + LP A+ P++ G+GP LV+ P+RELA Q
Sbjct 129 LSGLDMVGVAQTGSGKTLSYLLP----AIVHINHQPFLERGDGPICLVLAPTRELAQQVQ 184
Query 230 DVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMG 289
V + A +L+ C+ GG Q + GV +ATPGRL D L +
Sbjct 185 QVAAEYCRAC------RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTN 238
Query 290 LNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
L + YL DEADRM+DMGFE ++R ++D
Sbjct 239 LRRTTYLVLDEADRMLDMGFEPQIRKIVD 267
> tgo:TGME49_113240 DEAD/DEAH box helicase, putative (EC:5.99.1.3);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=685
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 107/193 (55%), Gaps = 10/193 (5%)
Query 132 PPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFT 191
P P +F++ FP I + L+K N PT IQ G P L GRD+IGIA TGSGKTL F
Sbjct 273 PRPVFSFEETGFPTAIQNQLRKMNFAEPTAIQKIGWPTALSGRDMIGIAQTGSGKTLGFL 332
Query 192 LPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQTTDVVNFFATALHEGGY--PQ--- 246
LP G + + + P G+GP LV+ P+RELA Q F L PQ
Sbjct 333 LP---GLVHAAAQPPLAQGQGPIVLVLAPTRELAMQIRHECMRFTEGLSLASSEDPQRAD 389
Query 247 --LRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMGLNQCRYLAFDEADRM 304
R C+ GGV Q QAT +RNG ++ATPGRL D L+ L + Y+ DEADRM
Sbjct 390 TKFRTACVYGGVPRQGQATELRNGAEILIATPGRLIDFLDLGVTNLKRVSYIVLDEADRM 449
Query 305 VDMGFEEEVRNVL 317
+DMGFE +VR +
Sbjct 450 MDMGFEPQVRKIF 462
> mmu:432554 Gm12183, OTTMUSG00000005521; predicted gene 12183;
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=670
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 112/209 (53%), Gaps = 11/209 (5%)
Query 111 TEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKNITAPTQIQMQGIPAL 170
T E R + V G + P P F + FP ++D + ++N T PT IQ QG P
Sbjct 124 TAQEVDTYRRSKEITVRGHNCPKPVLKFYEANFPANVMDVIARQNFTEPTAIQAQGWPVA 183
Query 171 LQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIA-GEGPWGLVVCPSRELASQTT 229
L G D++G+A TGSGKTL + LP ++ + P++ G+GP LV+ P+RELA Q
Sbjct 184 LSGLDMVGVAQTGSGKTLSYLLPAIVHIIH----QPFLERGDGPICLVLAPTRELAQQVQ 239
Query 230 DVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVATPGRLTDMLNKRRMG 289
V + A +L+ C+ GG Q + GV +ATPGRL D L +
Sbjct 240 QVAAEYCRAC------RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTN 293
Query 290 LNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
L + YL DEADRM+DMGFE ++R ++D
Sbjct 294 LRRTTYLVLDEADRMLDMGFEPQIRKIVD 322
Lambda K H
0.318 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 13077568040
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40