bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_1873_orf1 Length=172 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_114830 splicing factor 3b subunit 10, putative ; K1... 120 2e-27 pfa:PF13_0296 splicing factor 3b subunit, putative; K12832 spl... 118 9e-27 bbo:BBOV_III004720 17.m07423; splicing factor 3B subunit 10 (S... 115 7e-26 tpv:TP02_0480 hypothetical protein; K12832 splicing factor 3B ... 106 4e-23 ath:AT4G14342 pre-mRNA splicing factor 10 kDa subunit, putativ... 100 3e-21 ath:AT3G23325 splicing factor, putative 99.0 8e-21 xla:735187 sf3b5, MGC131202; splicing factor 3b, subunit 5, 10... 91.7 1e-18 mmu:66125 Sf3b5, 10kDa, 1110005L13Rik, AU043053, Sf3b10; splic... 91.7 1e-18 hsa:83443 SF3B5, MGC3133, SF3b10, Ysf3; splicing factor 3b, su... 91.3 1e-18 dre:436751 sf3b5, si:ch211-8a9.5, zgc:92874; splicing factor 3... 87.4 2e-17 cpv:cgd4_890 hypothetical protein ; K12832 splicing factor 3B ... 73.6 3e-13 sce:YNL138W-A YSF3, RCP10; Component of the SF3b subcomplex of... 39.3 0.007 ath:AT1G72320 APUM23; APUM23 (Arabidopsis Pumilio 23); RNA bin... 33.5 0.34 cpv:cgd8_4000 hypothetical protein 31.6 1.4 cel:B0495.6 hypothetical protein 30.8 2.3 hsa:2045 EPHA7, EHK3, HEK11; EPH receptor A7 (EC:2.7.10.1); K0... 30.4 2.9 mmu:72656 Ints8, 2810013E07Rik, AV063769, D130008D20Rik; integ... 29.3 6.5 > tgo:TGME49_114830 splicing factor 3b subunit 10, putative ; K12832 splicing factor 3B subunit 5 Length=108 Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 52/71 (73%), Positives = 62/71 (87%), Gaps = 0/71 (0%) Query 102 MSNMDRFTIHSQLQHLQSKYPGTGNADTTRLDWGINIQRDTLASHVGHYSRLAYFAVAEN 161 M+ DRF+I +QLQHLQSKY GTGNA TT+L+W +IQRDTLASHVGHYSRLAYFAV EN Sbjct 1 MAGYDRFSIQAQLQHLQSKYQGTGNAQTTKLEWATSIQRDTLASHVGHYSRLAYFAVVEN 60 Query 162 ESIRRIRYRCL 172 E+++R+RYR L Sbjct 61 ENVKRLRYRFL 71 > pfa:PF13_0296 splicing factor 3b subunit, putative; K12832 splicing factor 3B subunit 5 Length=86 Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 0/71 (0%) Query 102 MSNMDRFTIHSQLQHLQSKYPGTGNADTTRLDWGINIQRDTLASHVGHYSRLAYFAVAEN 161 MS DRF IH+QL+HLQSKY G+G+ADT+R +W NI RDTLASHVGHYSRLAYFAV EN Sbjct 1 MSTFDRFNIHAQLEHLQSKYQGSGHADTSRWEWLTNIHRDTLASHVGHYSRLAYFAVVEN 60 Query 162 ESIRRIRYRCL 172 E I +IRYRCL Sbjct 61 EPIAKIRYRCL 71 > bbo:BBOV_III004720 17.m07423; splicing factor 3B subunit 10 (SF3b10); K12832 splicing factor 3B subunit 5 Length=87 Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 50/71 (70%), Positives = 60/71 (84%), Gaps = 0/71 (0%) Query 102 MSNMDRFTIHSQLQHLQSKYPGTGNADTTRLDWGINIQRDTLASHVGHYSRLAYFAVAEN 161 MS DRF IH+QL+HLQSKY GTG+ + T+ +W +NIQRDTLASH GHY+RLAYFA+ EN Sbjct 1 MSGYDRFNIHAQLEHLQSKYQGTGHVNNTKWEWALNIQRDTLASHAGHYTRLAYFAICEN 60 Query 162 ESIRRIRYRCL 172 ESI RIR+RCL Sbjct 61 ESISRIRHRCL 71 > tpv:TP02_0480 hypothetical protein; K12832 splicing factor 3B subunit 5 Length=94 Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 45/71 (63%), Positives = 59/71 (83%), Gaps = 0/71 (0%) Query 102 MSNMDRFTIHSQLQHLQSKYPGTGNADTTRLDWGINIQRDTLASHVGHYSRLAYFAVAEN 161 MS+ DRF IH+QL+HLQSKY GTG+ D T+ +W +NIQRDTL+SH GHY+RLAYF++ EN Sbjct 1 MSSYDRFNIHAQLEHLQSKYQGTGHVDNTKWEWVLNIQRDTLSSHCGHYTRLAYFSIVEN 60 Query 162 ESIRRIRYRCL 172 E + RI++R L Sbjct 61 EPVFRIKHRFL 71 > ath:AT4G14342 pre-mRNA splicing factor 10 kDa subunit, putative; K12832 splicing factor 3B subunit 5 Length=87 Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 43/71 (60%), Positives = 56/71 (78%), Gaps = 0/71 (0%) Query 102 MSNMDRFTIHSQLQHLQSKYPGTGNADTTRLDWGINIQRDTLASHVGHYSRLAYFAVAEN 161 M DRF I+SQL+HLQ+KY GTG+AD +R +W +NIQRD+ AS++GHY L+YFA+AEN Sbjct 1 MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWAVNIQRDSYASYIGHYPMLSYFAIAEN 60 Query 162 ESIRRIRYRCL 172 ESI R RY + Sbjct 61 ESIGRERYNFM 71 > ath:AT3G23325 splicing factor, putative Length=87 Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 43/71 (60%), Positives = 56/71 (78%), Gaps = 0/71 (0%) Query 102 MSNMDRFTIHSQLQHLQSKYPGTGNADTTRLDWGINIQRDTLASHVGHYSRLAYFAVAEN 161 M DRF I+SQL+HLQ+KY GTG+AD +R +W +NIQRD+ AS++GHY L+YFA+AEN Sbjct 1 MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWTVNIQRDSYASYIGHYPMLSYFAIAEN 60 Query 162 ESIRRIRYRCL 172 ESI R RY + Sbjct 61 ESIGRERYNFM 71 > xla:735187 sf3b5, MGC131202; splicing factor 3b, subunit 5, 10kDa; K12832 splicing factor 3B subunit 5 Length=86 Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 0/67 (0%) Query 106 DRFTIHSQLQHLQSKYPGTGNADTTRLDWGINIQRDTLASHVGHYSRLAYFAVAENESIR 165 DR+TIHSQL+HLQSKY GTG+ADTT+ +W +N RD+ S++GH+ L YFAVAENES Sbjct 3 DRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAVAENESKA 62 Query 166 RIRYRCL 172 R+R+ + Sbjct 63 RVRFNLM 69 > mmu:66125 Sf3b5, 10kDa, 1110005L13Rik, AU043053, Sf3b10; splicing factor 3b, subunit 5; K12832 splicing factor 3B subunit 5 Length=86 Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 0/67 (0%) Query 106 DRFTIHSQLQHLQSKYPGTGNADTTRLDWGINIQRDTLASHVGHYSRLAYFAVAENESIR 165 DR+TIHSQL+HLQSKY GTG+ADTT+ +W +N RD+ S++GH+ L YFA+AENES Sbjct 3 DRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESKA 62 Query 166 RIRYRCL 172 R+R+ + Sbjct 63 RVRFNLM 69 > hsa:83443 SF3B5, MGC3133, SF3b10, Ysf3; splicing factor 3b, subunit 5, 10kDa; K12832 splicing factor 3B subunit 5 Length=86 Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 0/67 (0%) Query 106 DRFTIHSQLQHLQSKYPGTGNADTTRLDWGINIQRDTLASHVGHYSRLAYFAVAENESIR 165 DR+TIHSQL+HLQSKY GTG+ADTT+ +W +N RD+ S++GH+ L YFA+AENES Sbjct 3 DRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESKA 62 Query 166 RIRYRCL 172 R+R+ + Sbjct 63 RVRFNLM 69 > dre:436751 sf3b5, si:ch211-8a9.5, zgc:92874; splicing factor 3b, subunit 5; K12832 splicing factor 3B subunit 5 Length=86 Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 36/67 (53%), Positives = 52/67 (77%), Gaps = 0/67 (0%) Query 106 DRFTIHSQLQHLQSKYPGTGNADTTRLDWGINIQRDTLASHVGHYSRLAYFAVAENESIR 165 DR+ IHSQL+HLQSKY GTG+ADT++ +W +N RD+ S++GH+ L YFA++ENES Sbjct 3 DRYNIHSQLEHLQSKYIGTGHADTSKWEWLVNQHRDSYCSYMGHFDLLNYFAISENESKA 62 Query 166 RIRYRCL 172 R+R+ + Sbjct 63 RVRFNLM 69 > cpv:cgd4_890 hypothetical protein ; K12832 splicing factor 3B subunit 5 Length=85 Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 1/72 (1%) Query 102 MSNMDRFTIHSQLQHLQSKYPGTGNADTTRL-DWGINIQRDTLASHVGHYSRLAYFAVAE 160 M +R TI+ QL+ L SKY GTG+ +T R +WG NI RDT +S++ H SR++YFA+AE Sbjct 1 MDGENRSTIYFQLEQLHSKYQGTGHINTKRSSEWGDNILRDTASSNIMHQSRISYFAIAE 60 Query 161 NESIRRIRYRCL 172 N S RI +R L Sbjct 61 NTSKARISFRML 72 > sce:YNL138W-A YSF3, RCP10; Component of the SF3b subcomplex of the U2 snRNP, essential protein required for for splicing and for assembly of SF3b; K12832 splicing factor 3B subunit 5 Length=85 Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query 118 QSKYPGTGNADTTRLDWGINIQRDTLASHVGHYSRLAYFAVAENE-SIRRIRYRCL 172 + KY G G+ TTR W N++ DTL + GH + L Y +++ + SIR R L Sbjct 15 KQKYIGLGDESTTREQWQRNVRNDTLNTLQGHSASLEYVSLSRGDLSIRDTRIHLL 70 > ath:AT1G72320 APUM23; APUM23 (Arabidopsis Pumilio 23); RNA binding / binding; K14790 nucleolar protein 9 Length=753 Score = 33.5 bits (75), Expect = 0.34, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Query 13 QGPFSARKTTAAAAATTPEQQRRQQQHQQ--YNRCCSDFSSSENS 55 QGP+ RK A+ P+Q + +Q+ +Q YN CS F S++++ Sbjct 613 QGPYLLRKLDIDGYASRPDQWKSRQEAKQSTYNEFCSAFGSNKSN 657 > cpv:cgd8_4000 hypothetical protein Length=2010 Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 0/33 (0%) Query 9 RTKYQGPFSARKTTAAAAATTPEQQRRQQQHQQ 41 + K + P +KTT A +T E++ R+Q H++ Sbjct 333 KKKMEAPIPPKKTTVAPKSTEVEKEEREQSHEK 365 > cel:B0495.6 hypothetical protein Length=87 Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust. Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%) Query 106 DRFTIHSQLQHLQSKYPGTG-NADTTRLD 133 +RF + +QL+HLQSKY GT + +R+D Sbjct 6 ERFHVLAQLEHLQSKYTGTAMRHEPSRMD 34 > hsa:2045 EPHA7, EHK3, HEK11; EPH receptor A7 (EC:2.7.10.1); K05108 EphA7 [EC:2.7.10.1] Length=998 Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%) Query 34 RRQQQHQQYNRCCS-DFSSSENSTR-----------SCPPCLCLTWRPAIPVNLLFACRK 81 + Q Q +RC + FS E S+R S PP + T P+ P NL+F + Sbjct 285 KSSSQDLQCSRCPTHSFSDKEGSSRCECEDGYYRAPSDPPYVACTRPPSAPQNLIFNINQ 344 Query 82 GLLLL-WSPAA 91 + L WSP A Sbjct 345 TTVSLEWSPPA 355 > mmu:72656 Ints8, 2810013E07Rik, AV063769, D130008D20Rik; integrator complex subunit 8; K13145 integrator complex subunit 8 Length=995 Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 0/81 (0%) Query 83 LLLLWSPAAATVLLLQQAKMSNMDRFTIHSQLQHLQSKYPGTGNADTTRLDWGINIQRDT 142 L +L AA +L+L+ A N D + + L + PGT N +T G+ I+ + Sbjct 188 LKVLKEQAADCILVLEAALRLNKDLYVHTMRTLDLLAVEPGTVNGETENSTAGLKIRTEE 247 Query 143 LASHVGHYSRLAYFAVAENES 163 + V + AYF +S Sbjct 248 MQCQVCYDLGAAYFQQGSTDS 268 Lambda K H 0.322 0.131 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 4341553636 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40