bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_2081_orf1 Length=142 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_014210 centromere/microtubule binding protein, puta... 231 5e-61 ath:AT3G57150 NAP57; NAP57 (Arabidopsis thaliana homologue of ... 212 3e-55 cpv:cgd3_3850 Cbf5p; centromere-binding factor 5 like PUA doma... 210 1e-54 tpv:TP02_0508 rRNA pseudouridine synthase; K11131 H/ACA ribonu... 207 1e-53 bbo:BBOV_II005520 18.m06459; rRNA pseudouridine synthase famil... 207 1e-53 mmu:245474 Dkc1, BC068171, MGC107501; dyskeratosis congenita 1... 200 2e-51 dre:613144 dkc1, MGC110395, fv62a07, wu:fa28f10, wu:fc87a02, w... 198 5e-51 hsa:1736 DKC1, CBF5, DKC, FLJ97620, NAP57, NOLA4, XAP101; dysk... 196 2e-50 sce:YLR175W CBF5; Cbf5p (EC:5.4.99.-); K11131 H/ACA ribonucleo... 195 3e-50 pfa:PF14_0174 pseudouridine synthase, putative; K11131 H/ACA r... 191 8e-49 cel:K01G5.5 hypothetical protein; K11131 H/ACA ribonucleoprote... 175 4e-44 ath:AT5G14460 pseudouridine synthase/ transporter; K03177 tRNA... 62.4 4e-10 eco:b3166 truB, ECK3155, JW3135, yhbA; tRNA U55 pseudouridine ... 58.2 8e-09 mmu:72133 Trub1, 2610009I02Rik, 9030425C13Rik, AI448235, BB118... 45.1 7e-05 hsa:142940 TRUB1, PUS4; TruB pseudouridine (psi) synthase homo... 42.4 4e-04 dre:556642 trub1, zgc:195155; TruB pseudouridine (psi) synthas... 41.6 8e-04 pfa:PF10_0175 tRNA pseudouridine synthase, putative; K03177 tR... 38.5 0.007 tgo:TGME49_106520 tRNA pseudouridine synthase B, putative (EC:... 35.8 0.048 ath:AT2G28315 hypothetical protein 35.0 0.081 sce:YNL292W PUS4; Pseudouridine synthase, catalyzes only the f... 32.7 0.35 bbo:BBOV_III005720 17.m07509; tRNA pseudouridine synthase; K03... 32.0 0.74 cel:Y47A7.1 hypothetical protein 29.3 3.8 ath:AT1G15890 disease resistance protein (CC-NBS-LRR class), p... 28.9 5.4 ath:AT3G60750 transketolase, putative (EC:2.2.1.1); K00615 tra... 28.5 6.3 dre:797792 si:dkey-259k14.2 28.5 7.6 dre:798775 novel coagulation factor 28.1 8.5 bbo:BBOV_II006270 18.m10022; hypothetical protein 28.1 9.8 > tgo:TGME49_014210 centromere/microtubule binding protein, putative ; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Length=505 Score = 231 bits (589), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 110/140 (78%), Positives = 123/140 (87%), Gaps = 0/140 (0%) Query 3 VDTMGEKEKKKAAKAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPLPFGSSP 62 V + G + KK K + + I+P S++PPIDTSKWPLLLK+YDRLNVRTGHYTPLP G SP Sbjct 11 VASAGTEGGKKKKKTDNYAIEPNSSSPPIDTSKWPLLLKHYDRLNVRTGHYTPLPHGCSP 70 Query 63 LARPLQQHLNYGSLLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINR 122 L RPLQQ++NYG++ LDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINR Sbjct 71 LCRPLQQYINYGAMNLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINR 130 Query 123 ATRLVKSQQSAGKEYVAVAR 142 ATRLVKSQQSAGKEYV + R Sbjct 131 ATRLVKSQQSAGKEYVCIIR 150 > ath:AT3G57150 NAP57; NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Length=565 Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 98/135 (72%), Positives = 114/135 (84%), Gaps = 0/135 (0%) Query 8 EKEKKKAAKAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPLPFGSSPLARPL 67 +K + AA ++I+P S P IDTS+WP+LLKNYDRLNVRTGHYTP+ G SPL RPL Sbjct 15 DKTENDAADTGDYMIKPQSFTPAIDTSQWPILLKNYDRLNVRTGHYTPISAGHSPLKRPL 74 Query 68 QQHLNYGSLLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINRATRLV 127 Q+++ YG + LDKPANPSSHEVVAW+K+ILRVEKTGHSGTLDPKVTG L+VCI+RATRLV Sbjct 75 QEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLV 134 Query 128 KSQQSAGKEYVAVAR 142 KSQQ AGKEYV VAR Sbjct 135 KSQQGAGKEYVCVAR 149 > cpv:cgd3_3850 Cbf5p; centromere-binding factor 5 like PUA domain containing protein with a type I pseudouridine synthase domain ; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Length=520 Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%) Query 8 EKEKKKAAKAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPLPFGSSPLARPL 67 E E+ K E VI+P S + PIDTS WPLLLKNY +LNVRTGHYTPLP+G+SPL R L Sbjct 8 ELEEMSDGKIE-TVIKPESKSQPIDTSNWPLLLKNYSKLNVRTGHYTPLPYGNSPLNRNL 66 Query 68 QQHLNYGSLLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINRATRLV 127 +L+YG + LDKPANPSSHEVVAW+KKILR EKTGHSGTLDPKVTGCLLVC+NRATRLV Sbjct 67 ADYLSYGIINLDKPANPSSHEVVAWIKKILRCEKTGHSGTLDPKVTGCLLVCLNRATRLV 126 Query 128 KSQQSAGKEYVAVAR 142 KSQQSAGKEYV + R Sbjct 127 KSQQSAGKEYVCIVR 141 > tpv:TP02_0508 rRNA pseudouridine synthase; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Length=421 Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 93/127 (73%), Positives = 111/127 (87%), Gaps = 0/127 (0%) Query 16 KAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPLPFGSSPLARPLQQHLNYGS 75 K + F+I+P + +PPIDTS WPLLLKNYD+LNVRTGHYTP+P GSSPL R ++ ++ YG Sbjct 3 KNKSFLIKPEANSPPIDTSNWPLLLKNYDKLNVRTGHYTPMPHGSSPLCRDMKNYMKYGY 62 Query 76 LLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINRATRLVKSQQSAGK 135 + LDKPANPSSHEVVAW+K+ILR EKTGHSGTLDPKVTG LLVC+NR+TRLVKSQQ+ GK Sbjct 63 INLDKPANPSSHEVVAWIKRILRCEKTGHSGTLDPKVTGVLLVCLNRSTRLVKSQQTHGK 122 Query 136 EYVAVAR 142 EYVAV + Sbjct 123 EYVAVVK 129 > bbo:BBOV_II005520 18.m06459; rRNA pseudouridine synthase family protein; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Length=418 Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 96/128 (75%), Positives = 110/128 (85%), Gaps = 0/128 (0%) Query 15 AKAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPLPFGSSPLARPLQQHLNYG 74 AK FVI+P APPIDTS+WPLLLKNYD+LNVRTGHYTPLP GSSPL R L+ ++ YG Sbjct 2 AKDGDFVIKPQKAAPPIDTSEWPLLLKNYDKLNVRTGHYTPLPHGSSPLCRDLRNYIKYG 61 Query 75 SLLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINRATRLVKSQQSAG 134 + LDKPANPSSHE V+W+K+ILR EKTGHSGTLDPKVTG LLVCI+RATRLVKSQQ+ G Sbjct 62 FINLDKPANPSSHETVSWIKRILRCEKTGHSGTLDPKVTGVLLVCIDRATRLVKSQQTHG 121 Query 135 KEYVAVAR 142 KEYVA+ + Sbjct 122 KEYVAIVK 129 > mmu:245474 Dkc1, BC068171, MGC107501; dyskeratosis congenita 1, dyskerin homolog (human); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Length=509 Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 91/137 (66%), Positives = 111/137 (81%), Gaps = 0/137 (0%) Query 6 MGEKEKKKAAKAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPLPFGSSPLAR 65 + E + + AE F+I+P S +DTS+WPLLLKN+D+LNVRT HYTPLP GS+PL R Sbjct 22 LQEDDVAEIQHAEEFLIKPESKVAQLDTSQWPLLLKNFDKLNVRTAHYTPLPCGSNPLKR 81 Query 66 PLQQHLNYGSLLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINRATR 125 + ++ G + LDKP+NPSSHEVVAW+++ILRVEKTGHSGTLDPKVTGCL+VCI RATR Sbjct 82 EIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATR 141 Query 126 LVKSQQSAGKEYVAVAR 142 LVKSQQSAGKEYV + R Sbjct 142 LVKSQQSAGKEYVGIVR 158 > dre:613144 dkc1, MGC110395, fv62a07, wu:fa28f10, wu:fc87a02, wu:fi24a05, wu:fv62a07, zgc:110395; dyskeratosis congenita 1, dyskerin; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Length=506 Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 89/137 (64%), Positives = 111/137 (81%), Gaps = 0/137 (0%) Query 6 MGEKEKKKAAKAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPLPFGSSPLAR 65 + ++E ++ F+I+P S +DTS+WPLLLKN+D+LN+RT HYTPLP GS+PL R Sbjct 17 ISDEEVGDIQESGDFLIKPESKVASLDTSQWPLLLKNFDKLNIRTAHYTPLPHGSNPLKR 76 Query 66 PLQQHLNYGSLLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINRATR 125 + ++ G + LDKPANPSSHEVVAW+K+ILRVEKTGHSGTLDPKVTGCL+VC+ RATR Sbjct 77 GIHDYVRSGFINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCVERATR 136 Query 126 LVKSQQSAGKEYVAVAR 142 LVKSQQSAGKEYV + R Sbjct 137 LVKSQQSAGKEYVGIVR 153 > hsa:1736 DKC1, CBF5, DKC, FLJ97620, NAP57, NOLA4, XAP101; dyskeratosis congenita 1, dyskerin; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Length=509 Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 90/138 (65%), Positives = 112/138 (81%), Gaps = 0/138 (0%) Query 5 TMGEKEKKKAAKAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPLPFGSSPLA 64 ++ E++ + AE F+I+P S +DTS+WPLLLKN+D+LNVRT HYTPL GS+PL Sbjct 21 SLPEEDVAEIQHAEEFLIKPESKVAKLDTSQWPLLLKNFDKLNVRTTHYTPLACGSNPLK 80 Query 65 RPLQQHLNYGSLLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINRAT 124 R + ++ G + LDKP+NPSSHEVVAW+++ILRVEKTGHSGTLDPKVTGCL+VCI RAT Sbjct 81 REIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERAT 140 Query 125 RLVKSQQSAGKEYVAVAR 142 RLVKSQQSAGKEYV + R Sbjct 141 RLVKSQQSAGKEYVGIVR 158 > sce:YLR175W CBF5; Cbf5p (EC:5.4.99.-); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Length=483 Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 88/125 (70%), Positives = 106/125 (84%), Gaps = 0/125 (0%) Query 18 EGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPLPFGSSPLARPLQQHLNYGSLL 77 E FVI+P + DTS+WPLLLKN+D+L VR+GHYTP+P GSSPL R L+ +++ G + Sbjct 4 EDFVIKPEAAGASTDTSEWPLLLKNFDKLLVRSGHYTPIPAGSSPLKRDLKSYISSGVIN 63 Query 78 LDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINRATRLVKSQQSAGKEY 137 LDKP+NPSSHEVVAW+K+ILR EKTGHSGTLDPKVTGCL+VCI+RATRLVKSQQ AGKEY Sbjct 64 LDKPSNPSSHEVVAWIKRILRCEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQGAGKEY 123 Query 138 VAVAR 142 V + R Sbjct 124 VCIVR 128 > pfa:PF14_0174 pseudouridine synthase, putative; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Length=466 Score = 191 bits (484), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 85/127 (66%), Positives = 104/127 (81%), Gaps = 0/127 (0%) Query 16 KAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPLPFGSSPLARPLQQHLNYGS 75 K + I+P IDTS WPLLLKNYD+LN+RT H+TPLP G+SP +R ++++L YG Sbjct 4 KKMDYKIEPERKEAAIDTSNWPLLLKNYDKLNIRTSHFTPLPMGNSPYSRNIEEYLKYGI 63 Query 76 LLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINRATRLVKSQQSAGK 135 + LDKP+NPSSHEVV+W++KILR EKTGHSGTLDPKVTG LLVC+NRATRLVKSQQ +GK Sbjct 64 INLDKPSNPSSHEVVSWIRKILRCEKTGHSGTLDPKVTGVLLVCLNRATRLVKSQQESGK 123 Query 136 EYVAVAR 142 EYV V + Sbjct 124 EYVCVCK 130 > cel:K01G5.5 hypothetical protein; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Length=445 Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 81/146 (55%), Positives = 107/146 (73%), Gaps = 9/146 (6%) Query 6 MGEKEKK---------KAAKAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPL 56 MG+K+K+ +A + F + ++ +D S+WPLLLKNYD+LNVRT HYTP Sbjct 1 MGKKDKRSKLEGDDLAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPH 60 Query 57 PFGSSPLARPLQQHLNYGSLLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCL 116 G SPL R ++ +++ G LDKP+NPSSHEVV+W+K+ILR EKTGHSGTLDPKV+GCL Sbjct 61 VEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCL 120 Query 117 LVCINRATRLVKSQQSAGKEYVAVAR 142 +VCI+R TRL KSQQ AGKEY+ + + Sbjct 121 IVCIDRTTRLAKSQQGAGKEYICIFK 146 > ath:AT5G14460 pseudouridine synthase/ transporter; K03177 tRNA pseudouridine synthase B [EC:5.4.99.12] Length=540 Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 0/67 (0%) Query 76 LLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINRATRLVKSQQSAGK 135 LL++KP +S V L+++++V+K GH+GTLDP TG L+VC+ +AT++V Q K Sbjct 324 LLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMIK 383 Query 136 EYVAVAR 142 Y V R Sbjct 384 GYSGVFR 390 > eco:b3166 truB, ECK3155, JW3135, yhbA; tRNA U55 pseudouridine synthase (EC:4.2.1.70); K03177 tRNA pseudouridine synthase B [EC:5.4.99.12] Length=314 Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 0/69 (0%) Query 74 GSLLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVCINRATRLVKSQQSA 133 G LLLDKP SS++ + +K+I + GH+G LDP TG L +C+ AT+ + + Sbjct 13 GVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDS 72 Query 134 GKEYVAVAR 142 K Y +AR Sbjct 73 DKRYRVIAR 81 > mmu:72133 Trub1, 2610009I02Rik, 9030425C13Rik, AI448235, BB118943, C76870, MGC107612; TruB pseudouridine (psi) synthase homolog 1 (E. coli); K03177 tRNA pseudouridine synthase B [EC:5.4.99.12] Length=338 Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 16/85 (18%) Query 74 GSLLLDKPANPSSHEVVAWLKKILRVE----------------KTGHSGTLDPKVTGCLL 117 G + KP P+S E++ LK+ L E K GH GTLD G L+ Sbjct 58 GVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWNKRQKQTLKVGHGGTLDSAAQGVLV 117 Query 118 VCINRATRLVKSQQSAGKEYVAVAR 142 V I R T+++ S S K Y+ + Sbjct 118 VGIGRGTKMLTSMLSGSKRYITIGE 142 > hsa:142940 TRUB1, PUS4; TruB pseudouridine (psi) synthase homolog 1 (E. coli); K03177 tRNA pseudouridine synthase B [EC:5.4.99.12] Length=349 Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 16/85 (18%) Query 74 GSLLLDKPANPSSHEVVAWLKKILRVE----------------KTGHSGTLDPKVTGCLL 117 G + KP P+S E++ LK+ L E K GH GTLD G L+ Sbjct 70 GVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLDSAARGVLV 129 Query 118 VCINRATRLVKSQQSAGKEYVAVAR 142 V I T+++ S S K Y A+ Sbjct 130 VGIGSGTKMLTSMLSGSKRYTAIGE 154 > dre:556642 trub1, zgc:195155; TruB pseudouridine (psi) synthase homolog 1 (E. coli); K03177 tRNA pseudouridine synthase B [EC:5.4.99.12] Length=290 Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 15/85 (17%) Query 73 YGSLLLDKPANPSSHEVVAWLKKILRVE---------------KTGHSGTLDPKVTGCLL 117 +G + K P+S +V+ LKK L E K GH GTLD +G L+ Sbjct 19 HGIFAIHKKKGPTSADVLNILKKTLLKEAGVTNFNPRKRKQPFKIGHGGTLDSNASGVLV 78 Query 118 VCINRATRLVKSQQSAGKEYVAVAR 142 V I T+++ + + K+Y A Sbjct 79 VGIGEGTKMLTTMLAGSKKYTAFGE 103 > pfa:PF10_0175 tRNA pseudouridine synthase, putative; K03177 tRNA pseudouridine synthase B [EC:5.4.99.12] Length=560 Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 12/81 (14%) Query 73 YGSLL-LDKPANPSSHEVVAWLKKILRVE-----------KTGHSGTLDPKVTGCLLVCI 120 YG L + KP S V +KKIL+ K GH GTLDP G L++ I Sbjct 325 YGGFLNIYKPVKLYSMRVCEKIKKILKDYFYKLNKKKVNIKVGHGGTLDPFAEGVLIIGI 384 Query 121 NRATRLVKSQQSAGKEYVAVA 141 +AT+ + K+Y+A++ Sbjct 385 QQATKKLSDFLKCYKKYLALS 405 > tgo:TGME49_106520 tRNA pseudouridine synthase B, putative (EC:3.2.1.8) Length=573 Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 0/45 (0%) Query 98 RVEKTGHSGTLDPKVTGCLLVCINRATRLVKSQQSAGKEYVAVAR 142 R GH GTLDP TG L++ I T+ ++ + K Y AV R Sbjct 318 RKTGVGHGGTLDPAATGVLILGIGEGTKRLRHFLTGWKRYKAVVR 362 > ath:AT2G28315 hypothetical protein Length=342 Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query 37 PLLLKNYDRLNVRTGHYTPLPFGSSPLARPLQQHLNYGSLLLDKPANPSSHEVVAWLKKI 96 P + K LNV + HY+P+ G L+ + +N+ + L+ +P +++V+ LK Sbjct 202 PFVDKYLTSLNVFSFHYSPIVVGFITLSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTC 261 Query 97 LRVEKTGHSGTLDP 110 L V G++ DP Sbjct 262 L-VLAFGYTLLHDP 274 > sce:YNL292W PUS4; Pseudouridine synthase, catalyzes only the formation of pseudouridine-55 (Psi55), a highly conserved tRNA modification, in mitochondrial and cytoplasmic tRNAs; PUS4 overexpression leads to translational derepression of GCN4 (Gcd-phenotype) (EC:4.2.1.70); K03177 tRNA pseudouridine synthase B [EC:5.4.99.12] Length=403 Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Query 93 LKKILRVEKTGHSGTLDPKVTGCLLVCINRATR 125 L+K+ +V K GH GTLDP +G L++ I T+ Sbjct 60 LRKVSKV-KMGHGGTLDPLASGVLVIGIGAGTK 91 > bbo:BBOV_III005720 17.m07509; tRNA pseudouridine synthase; K03177 tRNA pseudouridine synthase B [EC:5.4.99.12] Length=282 Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 13/81 (16%) Query 74 GSLLLDKPANPSSHEVVAWLKKILRVE-------------KTGHSGTLDPKVTGCLLVCI 120 G L + KP +S++ +KKI+ E K GH GTLD G L + I Sbjct 34 GILNIYKPVMITSNDACQMVKKIIIDEMFKRKTIINKPKIKVGHGGTLDMHAEGVLAIGI 93 Query 121 NRATRLVKSQQSAGKEYVAVA 141 T+++ K Y A+ Sbjct 94 GNGTKMLPYYLKGDKIYEAIG 114 > cel:Y47A7.1 hypothetical protein Length=1114 Score = 29.3 bits (64), Expect = 3.8, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 8/49 (16%) Query 2 YVDTMGEKEKKKAAKAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRT 50 ++ GE++K++AA+A + ++ WP +L+N+D LN T Sbjct 98 FMQNQGEEKKEQAAQARRRI--------SVELKLWPEILENFDVLNFNT 138 > ath:AT1G15890 disease resistance protein (CC-NBS-LRR class), putative Length=851 Score = 28.9 bits (63), Expect = 5.4, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 0/37 (0%) Query 83 NPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLVC 119 N SSHE + +KIL V K + D KV C L C Sbjct 376 NSSSHEFPSMEEKILPVLKFSYDDLKDEKVKLCFLYC 412 > ath:AT3G60750 transketolase, putative (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] Length=741 Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 22/106 (20%) Query 13 KAAKAEGFVIQPTSTAPPIDTSKWPLLLKNYDRLNVRTGHYTPLPFGSSPLARPLQQHLN 72 +AA E ++PT+ + +D S + D + + LP G +P+A H+ Sbjct 65 RAAAVE--TVEPTTDSSIVDKSVNSIRFLAIDAVEKAKSGHPGLPMGCAPMA-----HIL 117 Query 73 YGSLLLDKPANPSSHEVVAWLKKILRVEKTGHSGTLDPKVTGCLLV 118 Y ++ P NP W + V GH GC+L+ Sbjct 118 YDEVMRYNPKNPY------WFNRDRFVLSAGH---------GCMLL 148 > dre:797792 si:dkey-259k14.2 Length=609 Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query 2 YVDTMGEKEKKKAAKAEGFVIQPTSTAPPIDTSKWPL---LLKN 42 Y DT+ +EK A KA+G V + P + KW LLKN Sbjct 325 YFDTVTSEEKDPACKADGLVTFERVSVPASELPKWKSEKKLLKN 368 > dre:798775 novel coagulation factor Length=427 Score = 28.1 bits (61), Expect = 8.5, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 12/87 (13%) Query 40 LKNYDRLNVRTGHYTPLPFGSSPLARPLQQHLNY------------GSLLLDKPANPSSH 87 L+ + +VR G Y F S + P++QH+++ L L+ PA S++ Sbjct 231 LETSSKFSVRLGDYQRFRFEGSEITLPVKQHISHPQYNPITVDNDIALLRLEVPAKFSTY 290 Query 88 EVVAWLKKILRVEKTGHSGTLDPKVTG 114 + A L + E+ H +TG Sbjct 291 ILPACLPSLELAERMLHRNGTVTVITG 317 > bbo:BBOV_II006270 18.m10022; hypothetical protein Length=1171 Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 5/42 (11%) Query 60 SSPLARPLQQHLNYG-----SLLLDKPANPSSHEVVAWLKKI 96 S PLA P +H+ + LLL P +PS V WL I Sbjct 601 SHPLAEPSTEHIRHNCVAGFELLLRTPWSPSIDSVFLWLSMI 642 Lambda K H 0.315 0.132 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2683748972 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40