bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_2140_orf2 Length=241 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_049390 NAD-specific glutamate dehydrogenase, putati... 145 2e-34 bbo:BBOV_III009680 17.m07840; Glutamate/Leucine/Phenylalanine/... 125 2e-28 tpv:TP04_0883 NAD-specific glutamate dehydrogenase (EC:1.4.1.2... 123 5e-28 pfa:PF08_0132 glutamate dehydrogenase, putative (EC:1.4.1.2); ... 64.7 3e-10 cel:Y48B6A.3 xrn-2; XRN (mouse/S. cerevisiae) ribonuclease rel... 30.4 5.2 > tgo:TGME49_049390 NAD-specific glutamate dehydrogenase, putative (EC:1.4.1.2); K00260 glutamate dehydrogenase [EC:1.4.1.2] Length=1113 Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/209 (43%), Positives = 123/209 (58%), Gaps = 31/209 (14%) Query 38 MSEKYGAQFAQVQQLLLQKGWFAEPVATEHLLDYYNHLGLNEFYFKAASPKSIADNLLAV 97 MS+KY AQ+ +V+Q+L Q+G ++ V + + YYNHLGLNE+YF+ A+ +++A NL V Sbjct 93 MSQKYAAQYEEVKQILAQRGDLSKRVISANADAYYNHLGLNEYYFQTATAQTVASNLACV 152 Query 98 IAARALHSVSGDDYFPEIRQRDERSGDVFALAKASLTASGAPRNYLVERAFELQFLDMGW 157 IAA+ L+ S DYFP+I+Q ER G+VF LA+ASL A +N+ VER E +FL + Sbjct 153 IAAKILNEFSHTDYFPQIQQ--ERDGEVFLLARASLRNRKASQNFQVEREIEKKFLGLS- 209 Query 158 GLRAPPQQQQRQQQQQRQQQRRRKQQMRMQCYRSTGSVFGMDGGA---ERLRTYFFQVAK 214 G P RMQCYRS+GS F D A ERLRTYF Q + Sbjct 210 GKTTP---------------------YRMQCYRSSGSFF--DDPADENERLRTYFLQQPE 246 Query 215 FPKRPEQ--LSPKEKDLSLLLDTDFYASK 241 + + + P E DLS LLD F+A+K Sbjct 247 YCAETTKDGVDPSETDLSKLLDVYFFANK 275 > bbo:BBOV_III009680 17.m07840; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase family protein (EC:1.4.1.2); K00260 glutamate dehydrogenase [EC:1.4.1.2] Length=1025 Score = 125 bits (313), Expect = 2e-28, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 110/208 (52%), Gaps = 32/208 (15%) Query 38 MSEKYGAQFAQVQQLLLQKGWFAEPVATEHLLDYYNHLGLNEFYFKAASPKSIADNLLAV 97 +S++Y QF +V +++ F++ + + YYN LGLNE+YF ++ K IA+N+++V Sbjct 30 LSDRYATQFQEVYKIVKDLKTFSDDTINQTMDQYYNKLGLNEYYFSTSNAKMIANNMVSV 89 Query 98 IAARALHSVSGDDYFPEIRQRDERSGDVFALAKASLTASGAPRNYLVERAFELQFLDMGW 157 + A+ LH SG DYFP I Q + G VF + +ASL + Y VE+ E +FL G Sbjct 90 LTAKILHENSGSDYFPLIEQVHD--GRVFIITRASLLNHKLSQIYAVEKTVEQRFLHFGD 147 Query 158 GLRAPPQQQQRQQQQQRQQQRRRKQQMRMQCYRSTGSVFGMDGGA---ERLRTYFFQVAK 214 R RMQC+RST S+F D A ERLR YFFQ+ Sbjct 148 VTRP---------------------VWRMQCFRSTNSMF--DDPANLFERLRIYFFQLPN 184 Query 215 FPK-RPEQLSPKEKDLSLLLDTDFYASK 241 F + PE P E LS LLD DFY +K Sbjct 185 FAENNPE---PGELRLSKLLDKDFYKNK 209 > tpv:TP04_0883 NAD-specific glutamate dehydrogenase (EC:1.4.1.2); K00260 glutamate dehydrogenase [EC:1.4.1.2] Length=1178 Score = 123 bits (309), Expect = 5e-28, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 113/206 (54%), Gaps = 28/206 (13%) Query 38 MSEKYGAQFAQVQQLLLQKGWFAEPVATEHLLDYYNHLGLNEFYFKAASPKSIADNLLAV 97 +S++Y QF++V +L+ F++ E + DYYN LGLNE+YF ++ IA+N+++V Sbjct 29 LSDRYCVQFSEVSELIRSMKTFSDDKIIEIMHDYYNELGLNEYYFSSSPTALIANNVISV 88 Query 98 IAARALHSVSGDDYFPEIRQRDERSGDVFALAKASLTASGAPRNYLVERAFELQFLDMGW 157 ++A+ LH SG ++FP I Q E S F +A+ S + NYLVE+ E ++ ++ Sbjct 89 MSAKVLHENSGSNFFPTIEQITEDSA--FIIARTSSVNRKSSENYLVEQRVEGKYFNL-- 144 Query 158 GLRAPPQQQQRQQQQQRQQQRRRKQQMRMQCYRSTGSVFG-MDGGAERLRTYFFQVAKFP 216 RK RMQC+RS+GSVF + +RL+TYF Q KF Sbjct 145 -------------------DDDRKTCWRMQCFRSSGSVFKETEHIFDRLKTYFLQKPKFT 185 Query 217 -KRPEQLSPKEKDLSLLLDTDFYASK 241 P+ P E +L+ LLD +FY +K Sbjct 186 VNNPD---PGETELANLLDREFYLNK 208 > pfa:PF08_0132 glutamate dehydrogenase, putative (EC:1.4.1.2); K00260 glutamate dehydrogenase [EC:1.4.1.2] Length=1397 Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 32/198 (16%) Query 45 QFAQVQQLLLQKGWFAEPVATEHLLDYYNHLGLNEFYFKAASPKSIADNLLAVIAARALH 104 ++ Q ++LL F++ + + Y+N LG N+F+F+ SP+ I+ ++ +I A+ Sbjct 35 KYEQTKELLKSYNLFSDHLINYSIDFYFNKLGFNKFHFEETSPELISKVVVCIITAKINE 94 Query 105 SVSGDDYFPEIRQRDERSGDVFALAKASLTASGAPRNYLVERAFE---LQFLDMGWGLRA 161 S D YFP + + +F + + + NY +E+ E F DM Sbjct 95 QYSSDKYFPTFEETHDNV--IFIITRVFADDNKTRLNYKMEKKIEEKYFNFSDMS----- 147 Query 162 PPQQQQRQQQQQRQQQRRRKQQMRMQCYRSTGSVFGMDGG-AERLRTYFFQVAKFPKRPE 220 K R++ +RS SVF + E LRTY ++ + + Sbjct 148 -------------------KDCYRLKSFRSVHSVFDKEHTYQEPLRTYILELPTY--NDD 186 Query 221 QLSPKEKDLSLLLDTDFY 238 + E DL L+D +FY Sbjct 187 IIKENETDLKKLMDVNFY 204 > cel:Y48B6A.3 xrn-2; XRN (mouse/S. cerevisiae) ribonuclease related family member (xrn-2); K12619 5'-3' exoribonuclease 2 [EC:3.1.13.-] Length=975 Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%) Query 108 GDDYFPEIRQRDERSGDVFALAKASLTASGAPRNYLVERAF-ELQFLDM---GWGLRAPP 163 G+D+ P + + R G + L K + YL + EL ++M G G Sbjct 342 GNDFLPHLPSLEIREGAIDRLIKLYKEMVYQMKGYLTKDGIPELDRVEMIMKGLGRVEDE 401 Query 164 QQQQRQQQQQRQQQRRRKQQMRMQCY 189 ++RQQ ++R Q+ +R ++ RMQ Y Sbjct 402 IFKRRQQDEERFQENQRNKKARMQMY 427 Lambda K H 0.320 0.131 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 8466654768 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40