bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_2215_orf1 Length=475 Score E Sequences producing significant alignments: (Bits) Value pfa:PF14_0028 pre-mRNA splicing factor, putative; K12842 U2-as... 271 4e-72 ath:AT5G25060 RNA recognition motif (RRM)-containing protein; ... 268 5e-71 tgo:TGME49_040710 RRM domain-containing protein 248 3e-65 hsa:23350 U2SURP, KIAA0332, MGC133197, SR140, fSAPa; U2 snRNP-... 241 4e-63 mmu:67958 2610101N10Rik, AU023006, Sr140, U2surp; RIKEN cDNA 2... 241 4e-63 tpv:TP04_0751 hypothetical protein; K12842 U2-associated prote... 238 3e-62 dre:567461 KIAA0332, mp:zf637-1-000918, wu:fa03e02, wu:fb38b01... 237 6e-62 ath:AT5G10800 RNA recognition motif (RRM)-containing protein 232 2e-60 dre:100037380 zgc:163098; K12842 U2-associated protein SR140 231 5e-60 bbo:BBOV_III008490 17.m07743; surp module family protein; K128... 164 5e-40 cel:C07H6.4 hypothetical protein; K12842 U2-associated protein... 159 2e-38 dre:550495 wu:fb12a12, wu:fb16h02, wu:fb55a06, wu:fc67h01, wu:... 57.4 1e-07 hsa:378950 RBMY1E; RNA binding motif protein, Y-linked, family... 56.2 3e-07 hsa:378948 RBMY1B; RNA binding motif protein, Y-linked, family... 55.8 3e-07 hsa:378949 RBMY1D; RNA binding motif protein, Y-linked, family... 55.8 3e-07 cpv:cgd6_4490 U2 snRNP. Hsh49p, RRM domain containing protein ... 55.8 3e-07 hsa:5940 RBMY1A1, MGC181956, RBM1, RBM2, RBMY, RBMY1C, YRRM1, ... 55.8 3e-07 hsa:27288 RBMXL2, HNRNPG-T, HNRNPGT, HNRPGT; RNA binding motif... 55.8 3e-07 ath:AT3G14100 oligouridylate-binding protein, putative 55.8 4e-07 xla:432140 pabpc1-b, MGC130736, MGC79060, pab1, pabp, pabp1, p... 55.5 5e-07 ath:AT1G47490 ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTE... 54.7 7e-07 dre:100330844 mCG19533-like; K13190 RNA-binding protein 15 54.7 dre:100136872 rbm15b, zgc:175165; RNA binding motif protein 15B 54.3 1e-06 ath:AT1G47500 ATRBP47C' (RNA-binding protein 47C'); RNA binding 54.3 1e-06 ath:AT1G49600 ATRBP47A (Arabidopsis thaliana RNA-binding prote... 53.9 1e-06 hsa:378951 RBMY1J; RNA binding motif protein, Y-linked, family... 53.9 1e-06 hsa:159163 RBMY1F, MGC33094, YRRM2; RNA binding motif protein,... 53.9 1e-06 ath:AT1G54080 UBP1A; oligouridylate-binding protein, putative;... 53.5 2e-06 mmu:19655 Rbmx; RNA binding motif protein, X chromosome; K1288... 53.5 2e-06 mmu:18458 Pabpc1, PABP, Pabp1, PabpI, Pabpl1, ePAB; poly(A) bi... 53.5 2e-06 sce:YNL016W PUB1, RNP1; Poly (A)+ RNA-binding protein, abundan... 53.5 2e-06 hsa:64783 RBM15, FLJ12479, FLJ21943, MGC119584, OTT, OTT1, SPE... 53.5 2e-06 ath:AT4G13860 glycine-rich RNA-binding protein, putative 53.5 2e-06 mmu:229700 Rbm15, C230088J01Rik, KIAA1438, mKIAA1438; RNA bind... 53.5 2e-06 ath:AT1G49760 PAB8; PAB8 (POLY(A) BINDING PROTEIN 8); RNA bind... 53.1 2e-06 ath:AT5G61030 GR-RBP3 (glycine-rich RNA-binding protein 3); AT... 53.1 2e-06 hsa:26986 PABPC1, PAB1, PABP, PABP1, PABPC2, PABPL1; poly(A) b... 53.1 2e-06 mmu:18459 Pabpc2, PABP, PABP+, Pabp2; poly(A) binding protein,... 52.8 3e-06 dre:798517 rbm15, im:7139999; RNA binding motif protein 15; K1... 52.4 3e-06 xla:379761 cirbp-a, MGC52663, XCIRP, XCIRP-1, cirbp, cirp, cir... 52.4 4e-06 mmu:19656 Rbmxrt, Hnrpg, MGC102184, Rbmx, Rbmxl1; RNA binding ... 52.4 4e-06 ath:AT5G54900 ATRBP45A (RNA-binding protein 45A); RNA binding 52.0 4e-06 mmu:76572 Rbmxl2, 1700012H05Rik, HNRNPG-T; RNA binding motif p... 52.0 5e-06 mmu:12696 Cirbp, Cirp, R74941; cold inducible RNA binding prot... 52.0 5e-06 hsa:1153 CIRBP, CIRP; cold inducible RNA binding protein; K131... 52.0 5e-06 xla:379896 pabpc1-a, MGC53109, pab1, pabp, pabp1, pabpc1, pabp... 52.0 6e-06 ath:AT5G19960 RNA recognition motif (RRM)-containing protein 51.6 7e-06 ath:AT3G19130 ATRBP47B (RNA-binding protein 47B); RNA binding 51.6 7e-06 dre:393856 pabpc1b, MGC77608, pabpc1, zgc:77608; poly A bindin... 51.6 7e-06 hsa:494115 RBMXL1, DKFZp547N1117, DKFZp667D0223, FLJ32614, RBM... 51.2 8e-06 > pfa:PF14_0028 pre-mRNA splicing factor, putative; K12842 U2-associated protein SR140 Length=655 Score = 271 bits (693), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 157/475 (33%), Positives = 241/475 (50%), Gaps = 47/475 (9%) Query 2 TPKRMPGRPGQKREIDSFLEEIKKRQELQGQKRRLYERLNLSRTEEERCALRFQIAALEN 61 T + G+ +EIDSFLEEIK +Q++ +++ L E+ L+++EEE+ + +I +E Sbjct 94 TTENKNNTVGKVKEIDSFLEEIKLKQKILDERKSLKEKSQLAKSEEEKIKINKKITEIEQ 153 Query 62 ATRPRGAPPIDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRR 121 P KE NLYLGNLSPE+TEE+LCQ+FGK G + SVKIMYPR +E+K++ Sbjct 154 NENLLSYIP---RKEKIANLYLGNLSPEVTEEYLCQKFGKFGKVNSVKIMYPRKDEDKKK 210 Query 122 NRNCGFVSFETRPQAESAKNSLDGKSFYGMVIRIGWGKALRPAFGATPTGLSGGFSDSPF 181 R GFV FE AE+AK++LDG G +IRIGW KA+ P FG Sbjct 211 ARISGFVCFENIEDAENAKDALDGVEMCGNIIRIGWSKAI-PKFGYN------------- 256 Query 182 PSSGFSPPPPSAFSAEVPTATPTPPPPPEAELVEVQVPKDRKVKMVIDLLAKYVAEEGHV 241 + S ++ + + ++ +P D+K K +IDLLAKYV EEG+ Sbjct 257 -----TKNEISNYNMDKYNTYNNVNVNKKVIII---IPDDKKTKRIIDLLAKYVTEEGYS 308 Query 242 FEQQVMEKFPPESGRLNFIYEKDSPDNIYYRWRVYAFGQGDTLRAWRVEPFFIYSGGRRW 301 FE+ + EK ++ +F++E S YY+WRV++F QGD+ + WR +PF I+S G + Sbjct 309 FEETIKEK-EKDNPIFHFLFE-SSDLFYYYKWRVFSFAQGDSYKNWRTDPFHIFSNGYLY 366 Query 302 AAPPEKYFQQPAKKKAEAAEERSIRIAARGGERLSAADREELEELLRNITRDRASICAAM 361 PA +K + + + +L +L + + R SIC AM Sbjct 367 VP--------PAIEKKNKGLLIKRKRGRNKRRHIDEKKKNKLINILSTLNKKRVSICRAM 418 Query 362 SFCMSHGSSSAEVCSCLTESLTLP--DTALTMRLARTYLLSDLLANSSAQTAHAWTYRYH 419 FC H S ++ ++ LT D +++ YLLSD+L N S + +W+YR H Sbjct 419 IFCTRHSDYSLDIIKIISNFLTDVKYDLLKKVKINLIYLLSDILYNCSNEFFSSWSYRKH 478 Query 420 LEKNLPLIADRWSKEDLRLGVGVGGGSPRTQQEQWQGVERALYKMTKLWEAWGVY 474 +E LP I K ++ + G + +L + +W W +Y Sbjct 479 IEDELPRIFYFLRKHIKKVDSKIKG----------KLFIDSLINIFNMWNCWAIY 523 > ath:AT5G25060 RNA recognition motif (RRM)-containing protein; K12842 U2-associated protein SR140 Length=946 Score = 268 bits (684), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 170/490 (34%), Positives = 252/490 (51%), Gaps = 66/490 (13%) Query 11 GQKREIDSFLEEIKKRQELQGQKRRLYERLNLSRTEEERCALRFQIAALENATRPRGAP- 69 G+ R ID+F+EE+K+ QE++ ER N R + + + L + P G P Sbjct 117 GKTRNIDNFMEELKREQEMR-------ERRNQDRDRQGDSSPSSRFDELPDDFDPSGRPG 169 Query 70 PIDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVS 129 D +TNLY+GNLSP++ E FL + FG+ G I SVKIM+PRT+EEKRR RNCGFVS Sbjct 170 SFDDGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTDEEKRRQRNCGFVS 229 Query 130 FETRPQAESAKNSLDGKSFYGMVIRIGWGKALRPAFGATPTGLSGGFSDSPFPSSGFSPP 189 F R ++AK+ + G Y ++IGWGKA+ PS P Sbjct 230 FMNRADGQAAKDEMQGIIVYEYELKIGWGKAV------------------SLPSQALPAP 271 Query 190 PPS------------AFSAEVPTATPTPPPPPEAELV--------EVQVPKDRKVKMVID 229 PP FS + T P +ELV V P+D ++ VID Sbjct 272 PPGHMAIRSKEGCNLVFSGQTGPPIITSVPNQNSELVLTPNVPDITVVTPEDEHLRHVID 331 Query 230 LLAKYVAEEGHVFEQQVMEKFPPESGRLN----FIYEKDSPDNIYYRWRVYAFGQGDTLR 285 LA YV + FEQ +ME+ GR N F++E S ++ YY WR+Y+F QGDTL+ Sbjct 332 TLALYVLDGECAFEQAIMER-----GRGNPLFKFMFELGSKEHTYYVWRLYSFAQGDTLQ 386 Query 286 AWRVEPFFIYSGGRRWAAPPEKYFQQPAKKKAEAAEERSIRIAARGGER-LSAADREELE 344 WR EP+ + +G RW PP + +K A+ + R ER L+ R+E E Sbjct 387 RWRTEPYIMITGSGRWIPPPLPVTRTQEHEKESASTYAAGRTRRAEVERTLTDPQRDEFE 446 Query 345 ELLRNITRDRASICAAMSFCMSHGSSSAEVCSCLTESLTLPDTALTMRLARTYLLSDLLA 404 ++LR +T +R+ I AM F + + ++ EV LTESLTL +T++ ++AR L+SD+L Sbjct 447 DMLRALTLERSQIKEAMGFALDNADAAGEVVEVLTESLTLKETSIPTKVARLMLVSDILH 506 Query 405 NSSAQTAHAWTYRYHLEKNLPLIADRWSKEDLRLGVGVGGGSPRTQQEQWQGVERALYKM 464 NSSA+ +A YR E LP I + ++ DL + T + + ++ + K+ Sbjct 507 NSSARVKNASAYRTKFEATLPDIMESFN--DLYRSI--------TGRITAEALKERVLKV 556 Query 465 TKLWEAWGVY 474 ++W W ++ Sbjct 557 LQVWADWFLF 566 > tgo:TGME49_040710 RRM domain-containing protein Length=859 Score = 248 bits (634), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 119/156 (76%), Positives = 140/156 (89%), Gaps = 1/156 (0%) Query 12 QKREIDSFLEEIKKRQELQGQKRRLYERLNLSRTEEERCALRFQIAALENATRPRGAPPI 71 K+EIDSFLEEIKK+QEL +K++LY++L+ +RTE+ER LR Q+ A+ENATR GAPP+ Sbjct 222 HKKEIDSFLEEIKKKQELIDKKKQLYKQLSETRTEDERMVLRAQLTAIENATRLPGAPPV 281 Query 72 DLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFE 131 DLEKESSTNLYLGNLSPEITEEFLCQQFGK+G ITSVKIMYPRTEEEK+RNRNCGFVSFE Sbjct 282 DLEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNCGFVSFE 341 Query 132 TRPQAESAKNSLDGKSFYGMVIRIGWGKAL-RPAFG 166 +RPQAE+AK++LDG SFYGMVIRIGWGK++ RP Sbjct 342 SRPQAEAAKHNLDGVSFYGMVIRIGWGKSVGRPVVA 377 > hsa:23350 U2SURP, KIAA0332, MGC133197, SR140, fSAPa; U2 snRNP-associated SURP domain containing; K12842 U2-associated protein SR140 Length=1029 Score = 241 bits (616), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 162/496 (32%), Positives = 248/496 (50%), Gaps = 71/496 (14%) Query 16 IDSFLEEIKKRQELQGQKRRLYERLNLSRTEEERCALRFQIAALENATRPRGAPPI---- 71 ++ F EE+K+ QE + ++ + RL SR E + Q +++ +R + + Sbjct 204 LELFKEELKQIQEERDERHKTKGRL--SRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDY 261 Query 72 -----DLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCG 126 D+ S+TNLYLGN++P++ EE LCQ+FG+ G + SVKIM+PRT+EE+ R RNCG Sbjct 262 APGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCG 321 Query 127 FVSFETRPQAESAKNSLDGKSFYGMVIRIGWGKALRPAFGATPTGLSGGFSDSPFPSSG- 185 FV+F R AE A +L+GK +++GWGKA+ S P P SG Sbjct 322 FVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGL 381 Query 186 -FSPPPPSAFSAEVPTATPTPPPPPEAE---------LVEVQVPKDRKVKMVIDLLAKYV 235 F+ P P A P PPP E +V+V +P +R + +I + ++V Sbjct 382 PFNAQPRERLKN--PNA-PMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFV 438 Query 236 AEEGHVFEQQVMEKFPPESGRLNFIYEKDSPDNIYYRWRVYAFGQGDTLRAWRVEPFFIY 295 EG +FE +M + + F++E +P ++YYRW++Y+ QGD+ WR E F ++ Sbjct 439 VREGPMFEAMIMNR-EINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMF 497 Query 296 SGGRRWAAPP--------------EKYFQQPAKKKAEAAEERSIRIAARGGERLSAADRE 341 G W PP E + ++P+KK A L R+ Sbjct 498 KNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGA-----------------LKEEQRD 540 Query 342 ELEELLRNITRDRASICAAMSFCMSHGSSSAEVCSCLTESLTLPDTALTMRLARTYLLSD 401 +LEE+LR +T + I AM FC+++ ++ E+ C+TESL++ T L ++AR YL+SD Sbjct 541 KLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSD 600 Query 402 LLANSSAQTAHAWTYRYHLEKNLPLIADRWSKEDLRLGVGVGGGSPRTQQEQWQGVERAL 461 +L NSSA+ A+A YR E L I DL + RT Q Q Sbjct 601 VLYNSSAKVANASYYRKFFETKLCQIF-----SDL-------NATYRTIQGHLQSENFKQ 648 Query 462 YKMT--KLWEAWGVYP 475 MT + WE W +YP Sbjct 649 RVMTCFRAWEDWAIYP 664 > mmu:67958 2610101N10Rik, AU023006, Sr140, U2surp; RIKEN cDNA 2610101N10 gene; K12842 U2-associated protein SR140 Length=1029 Score = 241 bits (615), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 162/496 (32%), Positives = 248/496 (50%), Gaps = 71/496 (14%) Query 16 IDSFLEEIKKRQELQGQKRRLYERLNLSRTEEERCALRFQIAALENATRPRGAPPI---- 71 ++ F EE+K+ QE + ++ + RL SR E + Q +++ +R + + Sbjct 204 LELFKEELKQIQEERDERHKTKGRL--SRFEPPQSDSDGQRRSMDVPSRRNRSSGVLDDY 261 Query 72 -----DLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCG 126 D+ S+TNLYLGN++P++ EE LCQ+FG+ G + SVKIM+PRT+EE+ R RNCG Sbjct 262 APGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCG 321 Query 127 FVSFETRPQAESAKNSLDGKSFYGMVIRIGWGKALRPAFGATPTGLSGGFSDSPFPSSG- 185 FV+F R AE A +L+GK +++GWGKA+ S P P SG Sbjct 322 FVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGL 381 Query 186 -FSPPPPSAFSAEVPTATPTPPPPPEAE---------LVEVQVPKDRKVKMVIDLLAKYV 235 F+ P P A P PPP E +V+V +P +R + +I + ++V Sbjct 382 PFNAQPRERLKN--PNA-PMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFV 438 Query 236 AEEGHVFEQQVMEKFPPESGRLNFIYEKDSPDNIYYRWRVYAFGQGDTLRAWRVEPFFIY 295 EG +FE +M + + F++E +P ++YYRW++Y+ QGD+ WR E F ++ Sbjct 439 VREGPMFEAMIMNR-EINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMF 497 Query 296 SGGRRWAAPP--------------EKYFQQPAKKKAEAAEERSIRIAARGGERLSAADRE 341 G W PP E + ++P+KK A L R+ Sbjct 498 KNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGA-----------------LKEEQRD 540 Query 342 ELEELLRNITRDRASICAAMSFCMSHGSSSAEVCSCLTESLTLPDTALTMRLARTYLLSD 401 +LEE+LR +T + I AM FC+++ ++ E+ C+TESL++ T L ++AR YL+SD Sbjct 541 KLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSD 600 Query 402 LLANSSAQTAHAWTYRYHLEKNLPLIADRWSKEDLRLGVGVGGGSPRTQQEQWQGVERAL 461 +L NSSA+ A+A YR E L I DL + RT Q Q Sbjct 601 VLYNSSAKVANASYYRKFFETKLCQIF-----SDL-------NATYRTIQGHLQSENFKQ 648 Query 462 YKMT--KLWEAWGVYP 475 MT + WE W +YP Sbjct 649 RVMTCFRAWEDWAIYP 664 > tpv:TP04_0751 hypothetical protein; K12842 U2-associated protein SR140 Length=730 Score = 238 bits (608), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 148/462 (32%), Positives = 234/462 (50%), Gaps = 45/462 (9%) Query 14 REIDSFLEEIKKRQELQGQKRRLYERLNLSRTEEERCALRFQIAALENATRPRGAPPIDL 73 REID+F+EEIK++Q +++ L +R + TE ER + ++ +EN GAP ++ Sbjct 109 REIDTFIEEIKEKQRTITERKELQKRFLTATTEYERYEINERLNRIENNLNT-GAPDLN- 166 Query 74 EKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETR 133 +TN+++GNLSP +TE+ L F K G I ++++ RT+ N+ GFVSF T Sbjct 167 ----TTNIHIGNLSPNVTEDILMSHFSKFGTIVGIRLIPSRTDTPPD-NKQTGFVSFMTH 221 Query 134 PQAESAKNSLDGKSFYGMVIRIGWGKAL-RPAFGATPTGLSGGFSDSPFPSSGFSPPPPS 192 QAE+AK +DG G +IGW K L +P P F+P Sbjct 222 EQAENAKVGMDGVEILGFPCKIGWAKNLIKPMISTVPM---------------FAP---- 262 Query 193 AFSAEVPTATPTPPPPPEAELVEVQVPKDRKVKMVIDLLAKYVAEEGHVFEQQVMEKFPP 252 A P P PP + +EV VP + K +IDL +KYV+E G FE+ +M K P Sbjct 263 ---ATPTMPIPQPMPPIIKDQLEVYVPTPQYKKRIIDLTSKYVSESGKDFEEVIM-KNEP 318 Query 253 ESGRLNFIYEKDSPDNIYYRWRVYAFGQGDTLRAWRVEPFFIYSGGRRWAAPPEKYFQQP 312 +G +F++++ +PD++YYRWRVY+ QGDT+R W F I + G+ + P Q Sbjct 319 RNGLFSFVFDRFTPDSVYYRWRVYSLVQGDTMRDWNKNMFKISNFGKSYIPPN----QST 374 Query 313 AKKKAEAAEERSIRIAARGGERLSAADREELEELLRNITRDRASICAAMSFCMSHGSSSA 372 A A S + G LS + E + +LR +T R IC AM F +++ S+ Sbjct 375 THDTAPAHSLHSSSVIQNGNVILSEEKKNEFDSILRGVTSVRNDICNAMLFVINNSESAY 434 Query 373 EVCSCLTESLTLPDTALTMRLARTYLLSDLLANSSAQTAHAWTYRYHLEKNLPLIADRWS 432 + L P+T + +++ Y++SD+L NSS+ ++W YR +EK+LP + Sbjct 435 HLTDLLFNYFNDPNTNVQQKISILYVISDVLYNSSSSKQYSWVYRNSIEKHLPQLFHSIK 494 Query 433 KEDLRLGVGVGGGSPRTQQEQWQGVERALYKMTKLWEAWGVY 474 + T + Q + A+ K+ +W++W VY Sbjct 495 Q----------YKEKSTSKISSQQLIDAVMKLLSIWDSWTVY 526 > dre:567461 KIAA0332, mp:zf637-1-000918, wu:fa03e02, wu:fb38b01, wu:fc75d03; si:dkey-181m9.9; K12842 U2-associated protein SR140 Length=968 Score = 237 bits (605), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 153/473 (32%), Positives = 240/473 (50%), Gaps = 26/473 (5%) Query 16 IDSFLEEIKKRQELQGQKRRLYERLN----LSRTEEERCALRFQIAALENATRPRGAP-P 70 ++ F EE+K+ QE + ++ RL R++ L TE R + ++ AP Sbjct 140 LELFKEELKQIQEERDERHRLKGRVSRFEPLPTTEGRRSSDGSSRRNRPSSVLDDSAPGS 199 Query 71 IDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSF 130 D+ ++TNLYLGN++P++ EE LCQ+FG++G + SVKIM+PRT+EE+ R RNCGFV+F Sbjct 200 HDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAF 259 Query 131 ETRPQAESAKNSLDGKSFYGMVIRIGWGKALRPAFGATPTGLSGGFSDSPFPSSG--FSP 188 TR AE A L+GK +++GWGK + S P P SG F+ Sbjct 260 MTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPPPPSGLPFNA 319 Query 189 PPPSAFSAEVPTATPTPPPPPEAE------LVEVQVPKDRKVKMVIDLLAKYVAEEGHVF 242 P P P E E +V+V +P +R + +I + ++V EG +F Sbjct 320 QPKERLKNPNAAMPPPPKCKEEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFVVREGPMF 379 Query 243 EQQVMEKFPPESGRLNFIYEKDSPDNIYYRWRVYAFGQGDTLRAWRVEPFFIYSGGRRWA 302 E +M + + F++E SP ++YYRW++Y QG++ W+ E F ++ G W Sbjct 380 EAMIMNR-EINNPLYRFLFENQSPAHVYYRWKLYTILQGESPTKWKTEDFRMFKNGSLWR 438 Query 303 APPEKYFQQPAKKKAEAAEERSIRIAARGGERLSAADREELEELLRNITRDRASICAAMS 362 PP + + E ++ I +G L +R++LEELLR +T ++ I M Sbjct 439 PPPLNPYLHGTPEDEEHEDDDDEEICKKGS--LKDEERDKLEELLRGLTPRKSDIAGGMF 496 Query 363 FCMSHGSSSAEVCSCLTESLTLPDTALTMRLARTYLLSDLLANSSAQTAHAWTYRYHLEK 422 FC++H ++ E+ C+ ESL++ T L ++AR YL+SD+L NSSA+ +A YR E Sbjct 497 FCLTHADAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNSSAKVTNASYYRKFFET 556 Query 423 NLPLIADRWSKEDLRLGVGVGGGSPRTQQEQWQGVERALYKMTKLWEAWGVYP 475 L I DL G Q + ++ + + WE W VYP Sbjct 557 KLCQIFS-----DLNATYKTIQG-----HLQSENFKQRVMSCFRAWEEWAVYP 599 > ath:AT5G10800 RNA recognition motif (RRM)-containing protein Length=947 Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 172/494 (34%), Positives = 252/494 (51%), Gaps = 71/494 (14%) Query 11 GQKREIDSFLEEIKKRQELQGQKRRLYERLNLSRTEEERCALRFQIAALENATRPRG-AP 69 G+ R ID F+EE+K+ QE++ +RR +R N SR + L + P G Sbjct 121 GKTRNIDHFVEELKREQEIR--ERRNQDREN-SRDHNSDNTSSSRFDELPDYFDPSGRLG 177 Query 70 PIDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVS 129 +D +TNLY+ NLS ++ E FL + FG+ G I SVKIM+PRTEEEKRR R+CGFV+ Sbjct 178 SLDDGDPQTTNLYVVNLSSKVDENFLLRTFGRFGPIASVKIMWPRTEEEKRRERHCGFVA 237 Query 130 FETRPQAESAKNSLDGKSFYGMVIRIGWGKALRPAFGATPTGLSGGFSDSPFPSSGFSPP 189 F R E+AK + G Y ++IGWGK + PS P Sbjct 238 FMNRADGEAAKEKMQGIIVYEYELKIGWGKVVF------------------LPSQALPAP 279 Query 190 PPSAFSAE-------VPTATPTPP----PPPEAELV--------EVQVPKDRKVKMVIDL 230 PP + + + T PP P +ELV V P+D +K +ID Sbjct 280 PPGHMAIRSKEGCNLIFSVTSGPPMNSVPNQNSELVLTPNVPDITVISPEDEHLKQIIDT 339 Query 231 LAKYVAEEGHVFEQQVMEKFPPESGR----LNFIYEKDSPDNIYYRWRVYAFGQGDTLRA 286 +A V + G FEQ +ME+ GR NF++E S ++ YY WR+Y+F QGDTL+ Sbjct 340 MALNVLDGGCAFEQAIMER-----GRGNPLFNFLFELGSKEHTYYVWRLYSFAQGDTLQR 394 Query 287 WRVEPFFIYSGGRRWAAPPEKYFQQPAKKKAEAAEERSIRIAA------RGGERLSAADR 340 WR EP+ + +G RW PP PA + E +E AA + L+ + R Sbjct 395 WRTEPYIMIAGSGRWIPPP-----LPATRSPEHGKESRGTYAAGKSRCTEAEQTLTDSQR 449 Query 341 EELEELLRNITRDRASICAAMSFCMSHGSSSAEVCSCLTESLTLPDTALTMRLARTYLLS 400 +E E++LR +T +R+ I AM F + + ++ EV LTESLTL +T++ ++AR L+S Sbjct 450 DEFEDMLRALTLERSQIREAMGFALDNAEAAGEVVEVLTESLTLKETSIPTKVARLMLVS 509 Query 401 DLLANSSAQTAHAWTYRYHLEKNLPLIADRWSKEDLRLGVGVGGGSPRTQQEQWQGVERA 460 D++ NSSA+ +A YR E LP I + ++ L V G R E + ER Sbjct 510 DIIHNSSARVKNASAYRTKFEATLPDIMESFND----LYHSVHG---RITAEALR--ERV 560 Query 461 LYKMTKLWEAWGVY 474 L K+ ++W W ++ Sbjct 561 L-KVLQVWADWFLF 573 > dre:100037380 zgc:163098; K12842 U2-associated protein SR140 Length=874 Score = 231 bits (589), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 147/414 (35%), Positives = 224/414 (54%), Gaps = 37/414 (8%) Query 77 SSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQA 136 ++TNLY+G ++P++TEE LC++FGK+G + SVKIM+PRTEEE+ R N GFV+F TR A Sbjct 164 NTTNLYIGCINPKMTEEMLCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDA 223 Query 137 ESAKNSLDGKSFYGMVIRIGWGKALR--PAFGATPTGLSGGFSDSPFPSSG--FSPPPPS 192 E A +LDGK+ G +++GWGKA+R P TP G+ + +P P SG F+ P Sbjct 224 ERALAALDGKTVMGFEMKLGWGKAVRIPPQPLYTPIGVLK--TTAPPPPSGLPFNAQPRD 281 Query 193 AFSAEVPTATPTPPPPPEAE---------LVEVQVPKDRKVKMVIDLLAKYVAEEGHVFE 243 F + T P + +V V +P +R + +I + ++V EG +FE Sbjct 282 RFRNDF-----TKPRSRSQDDFYKTLSEAVVTVVIPPERNLLGLIHRMIEFVVREGPMFE 336 Query 244 QQVM--EKFPPESGRLNFIYEKDSPDNIYYRWRVYAFGQGDTLRAWRVEPFFIYSGGRRW 301 +M EK P+ F+++ S +++YYRW++Y+ QG+ WR F ++ GG W Sbjct 337 AMIMNREKNNPD---FRFLFDNKSQEHVYYRWKLYSILQGENPNNWRTSSFRMFRGGSLW 393 Query 302 AAPPEKYFQQPAKKKAEAAEERSIRIAARGGERLSAADREELEELLRNITRDRASICAAM 361 P + ++ EA+ +G +L + RE+LE LLR +T R I AM Sbjct 394 KPPLLNPYLHGDEEPEEASFPSPEEEPKKG--QLKSEHREKLEVLLRGLTPRRDEIGDAM 451 Query 362 SFCMSHGSSSAEVCSCLTESLTLPDTALTMRLARTYLLSDLLANSSAQTAHAWTYRYHLE 421 FC+ ++ E+ SC+TESL++ T L ++AR YL+SD+L NS A+ A+A YR E Sbjct 452 LFCLERAEAAEEIVSCITESLSIAHTPLQKKIARLYLISDILYNSCAKVANASYYRKFFE 511 Query 422 KNLPLIADRWSKEDLRLGVGVGGGSPRTQQEQWQGVERALYKMTKLWEAWGVYP 475 LP I S+ R Q EQ++ + + + WE W VYP Sbjct 512 TKLPEIFGDISE-------AYRNIQARLQAEQFK---QRIMGCFRAWEDWAVYP 555 > bbo:BBOV_III008490 17.m07743; surp module family protein; K12842 U2-associated protein SR140 Length=717 Score = 164 bits (416), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 129/470 (27%), Positives = 211/470 (44%), Gaps = 60/470 (12%) Query 10 PGQKREIDSFLEEIKKRQELQGQKRRLYERLNLSRTEEER-CA--LRFQIAALENATRPR 66 PG+ +EID+F++E+K++Q+ Q ++ L + S T R C+ + + I + ++ + Sbjct 99 PGKTKEIDAFIQELKEKQQRQEAEKALQRKGVSSATRTSRFCSPKVDYDIHKQDTLSQSK 158 Query 67 GAPPIDLEKESSTNLYLGNLSPEITEEFLCQQF-GKHGVITSVKIMYPRTEEEKRRNRNC 125 A LY+ NL P ++F ++ ++G I V I+ P T + Sbjct 159 NA------------LYISNL-PLSVQQFDVERLCSRYGAIDHVSIV-PVTT--GPHDSVY 202 Query 126 GFVSFETRPQAESAKNSLDGKSFYGMVIRIGWGKALRPAFGATPTGLSGGFSDSPFPSSG 185 V + A AK+ LDGK YG I WG GA P+ +G + Sbjct 203 AVVIYRDPTDAACAKDDLDGKEIYGRRCEINWGYQ-----GAIPSQFTGQMHND------ 251 Query 186 FSPPPPSAFSAEVPTATPTPPPPPEAELVEVQVPKDRKVKMVIDLLAKYVAEEGHVFEQQ 245 + T P ++ V+V +P + + VIDL A+YVAE G +E Sbjct 252 ---------------TSTTRPLLAYSDTVDVCMPMNPAKRAVIDLTARYVAEIGADYEYL 296 Query 246 VMEKFPPESGRLNFIYEKDSPDNIYYRWRVYAFGQGDTLRAWRVEPFFIYSGGRRWAAPP 305 ++ G +F++++ SP+++YYRW+VY+ Q DT WR + F + + G W PP Sbjct 297 LISN-EKRDGLFSFLHDRCSPEHVYYRWKVYSLLQNDTDSKWRTDGFCVITDGLVWY-PP 354 Query 306 EKYFQQPAKKKAEAAEERSIRIAARGGERLSAADREELEELLRNITRDRASICAAMSFCM 365 Q + S+ + G + ++ +LE +L N T R I AM F + Sbjct 355 TDLTQPRVPDPLLGIDPASL--SQNGKTPMQQSELRKLESILSNATTIRGYIADAMMFMI 412 Query 366 SHGSSSAEVCSCLTESLTLPDTALTMRLARTYLLSDLLANSSAQTAHAWTYRYHLEKNLP 425 +HG S+ +V CL E + + +++R Y+LSD+L N+SA W YR EK +P Sbjct 413 NHGESAVQVTDCLVEYIMKDSPTVDTKISRLYILSDVLYNTSASHQFGWIYRLTFEKKIP 472 Query 426 LIADRWSKEDLRLGVGVGGGSPRTQQEQWQGVERALYKMTKLWEAWGVYP 475 + +E ++ S QE VER L W W YP Sbjct 473 EVFAHI-REYIK-----SSTSKIAVQELISCVERIL----NAWHQWDAYP 512 > cel:C07H6.4 hypothetical protein; K12842 U2-associated protein SR140 Length=933 Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 135/520 (25%), Positives = 225/520 (43%), Gaps = 95/520 (18%) Query 39 RLNLSRTEEER---CALRFQI--AALENATRPRGAPPIDL---------EKESSTNLYLG 84 ++ L R +E+R LR + ++ A R AP ++ + +TN+Y+ Sbjct 146 KMELQRVQEDREKRKDLRHHLEKVGMDQAVVERLAPTVERGFQGTSEFDDDPYTTNVYVS 205 Query 85 NLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESAKNSLD 144 N+ +TE+ L FG G + ++KI+YPR+EEE+RR C FV+F +R + + Sbjct 206 NIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHICAFVAFMSRADVDRFMAEVR 265 Query 145 GKSFYGMVIRIGWGKALR-PAFGA-TPTGLSGGFSDSPFPSSGFSPPPPSAFSAEVPTAT 202 IR + + ++ PA P L P + F+ P A + + Sbjct 266 VIIVRNEPIRFAFARPVQIPAIPYYIPPVLHALQHPDPTSNLPFNAQPDCADAKKFLEKY 325 Query 203 PTPPP----PPEAEL-------------VEVQVPKDRKVKMVIDLLAKYVAEEGHVFEQQ 245 T PP P + + + V VP DRK+ V+D +A YV EG FE Sbjct 326 NTFPPMHALPTKGQYGYEDFTELIRNSQIRVVVPPDRKLVRVMDRMAVYVVTEGPQFEAM 385 Query 246 VM-EKFPPESGRLNFIYEKDSPDNIYYRWRVYAFGQGDTLRAWRVEPFFIYSGGRRW--- 301 + E+F ++ F+++ S ++YYRWR+Y+ QGDT+ WR PF ++ G W Sbjct 386 ICAEEF--QNPMFQFLWDNTSALHVYYRWRIYSLLQGDTIEEWRRTPFRMFENGSWWIPP 443 Query 302 --------AAPPEKYFQQPAKKKAEAAEERSIRIAARGGE-------------------- 333 A P E Y + + + RGGE Sbjct 444 YPINELRDAMPKELYHMNCLRTYPDKWMKVRDGGQRRGGESSKNRRNSDAEKEERKMRRE 503 Query 334 -----------------RLSAADREELEELLRNITRDRASICAAMSFCMSHGSSSAEVCS 376 R+S R++LE L+R +T ++ SI A M +C+ + +AE+C Sbjct 504 EEKERKRREKNEKKRNNRMSDKRRDKLETLIRELTPEKTSIAATMVWCIQNAKYAAEICE 563 Query 377 CLTESLTLPDTALTMRLARTYLLSDLLANSSAQTA-HAWTYRYHLEKNLPLIADRWSKED 435 C+ +SLT+ D L +++R YL++D+L+N + + YR H E L I Sbjct 564 CVYDSLTIEDIPLYKKISRLYLINDILSNCVQRNVRDVFLYRSHFEALLEKIF------- 616 Query 436 LRLGVGVGGGSPRTQQEQWQGVERALYKMTKLWEAWGVYP 475 + +G R +QEQ++ +++ +E VYP Sbjct 617 VAVGKAYRAIPSRIKQEQFKQRVMCVFRN---FEEMAVYP 653 > dre:550495 wu:fb12a12, wu:fb16h02, wu:fb55a06, wu:fc67h01, wu:fj10g10, zgc:109887; zgc:112425; K13195 cold-inducible RNA-binding protein Length=185 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 3/75 (4%) Query 81 LYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESAK 140 L++G LS + TE+ L F K+GVIT+V + R E R+R GFV+FE A+ A Sbjct 7 LFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNR---ETNRSRGFGFVTFENPDDAKDAL 63 Query 141 NSLDGKSFYGMVIRI 155 ++GKS G IR+ Sbjct 64 EGMNGKSVDGRTIRV 78 > hsa:378950 RBMY1E; RNA binding motif protein, Y-linked, family 1, member E Length=496 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 6/93 (6%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 +E + L++G L+ E E+ L FGKHG I+ V ++ RT ++R F++FE Sbjct 2 VEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTS----KSRGFAFITFEN 57 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKALRPAF 165 A++A ++GKS +G I++ +A +P+F Sbjct 58 PADAKNAAKDMNGKSLHGKAIKV--EQAKKPSF 88 > hsa:378948 RBMY1B; RNA binding motif protein, Y-linked, family 1, member B Length=496 Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 6/93 (6%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 +E + L++G L+ E E+ L FGKHG I+ V ++ RT ++R F++FE Sbjct 2 VEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTS----KSRGFAFITFEN 57 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKALRPAF 165 A++A ++GKS +G I++ +A +P+F Sbjct 58 PADAKNAAKDMNGKSLHGKAIKV--EQAKKPSF 88 > hsa:378949 RBMY1D; RNA binding motif protein, Y-linked, family 1, member D Length=496 Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 6/93 (6%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 +E + L++G L+ E E+ L FGKHG I+ V ++ RT ++R F++FE Sbjct 2 VEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTS----KSRGFAFITFEN 57 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKALRPAF 165 A++A ++GKS +G I++ +A +P+F Sbjct 58 PADAKNAAKDMNGKSLHGKAIKV--EQAKKPSF 88 > cpv:cgd6_4490 U2 snRNP. Hsh49p, RRM domain containing protein ; K12831 splicing factor 3B subunit 4 Length=216 Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%) Query 70 PIDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVS 129 P+D+ NLY+GNLSPEI E+FL F G I S+KI+ ++ + +N F++ Sbjct 105 PLDI----GANLYVGNLSPEIDEKFLFYLFSNFGKILSLKIV--GNDQSSQSPKNSAFIN 158 Query 130 FETRPQAESAKNSLDGKSFYGMVIRIGWG 158 F + +++SA +L+G+ F I + + Sbjct 159 FSSFQESDSAIQALNGQFFCNQQISVSYA 187 Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Query 74 EKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETR 133 E+ LY GNL ++ EE L + F + G + SV I PR ++ + GF+ FE Sbjct 18 ERNQEATLYCGNLENKVDEEMLAELFSQCGPVKSVHI--PR-DKVTGHHSGFGFIEFEFV 74 Query 134 PQAESAKNSLDGKSFYGMVIR 154 E A+ ++ + IR Sbjct 75 SDVEYAQKVMNSIKLFTKQIR 95 > hsa:5940 RBMY1A1, MGC181956, RBM1, RBM2, RBMY, RBMY1C, YRRM1, YRRM2; RNA binding motif protein, Y-linked, family 1, member A1 Length=496 Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 6/93 (6%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 +E + L++G L+ E E+ L FGKHG I+ V ++ RT ++R F++FE Sbjct 2 VEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTS----KSRGFAFITFEN 57 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKALRPAF 165 A++A ++GKS +G I++ +A +P+F Sbjct 58 PADAKNAAKDMNGKSLHGKAIKV--EQAKKPSF 88 > hsa:27288 RBMXL2, HNRNPG-T, HNRNPGT, HNRPGT; RNA binding motif protein, X-linked-like 2 Length=392 Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 5/93 (5%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 +E + L++G L+ E E+ L +FGK+G I V +M + E ++R FV+FE+ Sbjct 2 VEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLM---KDRETNKSRGFAFVTFES 58 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKALRPAF 165 A++A ++GKS G I++ +A +PAF Sbjct 59 PADAKAAARDMNGKSLDGKAIKV--AQATKPAF 89 > ath:AT3G14100 oligouridylate-binding protein, putative Length=427 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%) Query 74 EKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETR 133 + S N+++G+LSPE+T+ L Q F + ++M+ +++ R+R GFVSF + Sbjct 139 DTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMW---DQKTGRSRGFGFVSFRNQ 195 Query 134 PQAESAKNSLDGKSFYGMVIRIGW 157 A++A N ++GK IR W Sbjct 196 QDAQTAINEMNGKWLSSRQIRCNW 219 Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 7/96 (7%) Query 65 PRGAPPIDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRN 124 P G P + + ++Y+GN+ ++TE L + F G + S K++ ++ + Sbjct 45 PSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLI-------RKDKSS 97 Query 125 CGFVSFETRPQAESAKNSLDGKSFYGMVIRIGWGKA 160 GFV + R A A SL+G+ +G I++ W A Sbjct 98 YGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYA 133 Score = 38.9 bits (89), Expect = 0.041, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Query 79 TNLYLGNLSPEITEEFLCQQFGK--HGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQA 136 T +Y+GNL+PE+T+ L + F GVI V++ +R++ GFV + T P+A Sbjct 265 TTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRV---------QRDKGFGFVRYNTHPEA 315 Query 137 ESAKNSLDGKSF-YGMVIRIGWGKALRP 163 A + + + + I+ WG P Sbjct 316 ALAIQMGNTQPYLFNRQIKCSWGNKPTP 343 > xla:432140 pabpc1-b, MGC130736, MGC79060, pab1, pabp, pabp1, pabpc2; poly(A) binding protein, cytoplasmic 1; K13126 polyadenylate-binding protein Length=633 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 4/78 (5%) Query 79 TNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAES 138 TN+Y+ N ++ +E L + FG++G SVK+M ++ ++R GFVSFE A+ Sbjct 191 TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVM----TDDHGKSRGFGFVSFERHEDAQK 246 Query 139 AKNSLDGKSFYGMVIRIG 156 A + ++GK G I +G Sbjct 247 AVDDMNGKDLNGKAIFVG 264 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Query 80 NLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESA 139 +LY+G+L P++TE L ++F G I S+++ + RR+ +V+F+ AE A Sbjct 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVC---RDMITRRSLGYAYVNFQQPADAERA 68 Query 140 KNSLDGKSFYGMVIRIGWGK 159 ++++ G +RI W + Sbjct 69 LDTMNFDVIKGKPVRIMWSQ 88 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 8/132 (6%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 + + NLY+ NL I +E L ++F G ITS K+M E R++ GFV F + Sbjct 288 ITRYQGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMM-----EGGRSKGFGFVCFSS 342 Query 133 RPQAESAKNSLDGKSFYG--MVIRIGWGKALRPAFGATPTGLSGGFSDSPFPSSG-FSPP 189 +A A ++G+ + + + K R A P P + PP Sbjct 343 PEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRVPNPVINPYQPP 402 Query 190 PPSAFSAEVPTA 201 P S F A +P A Sbjct 403 PSSYFMAAIPPA 414 Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 5/88 (5%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 L K N+++ NL I + L F G I S K++ ++ ++ GFV FET Sbjct 93 LRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-----DENGSKGYGFVHFET 147 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKA 160 + AE A + ++G + +G K+ Sbjct 148 QEAAERAIDKMNGMLLNDRKVFVGRFKS 175 > ath:AT1G47490 ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C); RNA binding Length=432 Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 16/97 (16%) Query 63 TRPRGAPPIDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRN 122 TRP G D+ +T +++G L +T+E L Q F + G I SVKI Sbjct 295 TRPEG----DI---MNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPV---------G 338 Query 123 RNCGFVSFETRPQAESAKNSLDGKSFYGMVIRIGWGK 159 + CGFV F RP AE A L+G +R+ WG+ Sbjct 339 KGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGR 375 Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query 81 LYLGNLSPEITEEFLCQQFG-KHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESA 139 +++G+LSP++++ L + F K+ + + K++ + R++ GFV F + A Sbjct 199 IFVGDLSPDVSDNLLHETFSEKYPSVKAAKVV---LDANTGRSKGYGFVRFGDENERTKA 255 Query 140 KNSLDGKSFYGMVIRIG 156 ++G +RIG Sbjct 256 MTEMNGVKCSSRAMRIG 272 > dre:100330844 mCG19533-like; K13190 RNA-binding protein 15 Length=815 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 10/109 (9%) Query 58 ALENATRPRG--APPIDLEKE----SSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIM 111 ALE TR P DL+ E ++ NL++GNL ITE L Q F K+G+I V I Sbjct 242 ALEERTRAYAYQLPEEDLKPEDDQRATRNLFIGNLDHNITEVELRQGFDKYGIIEEVVIK 301 Query 112 YPRTEEEKRRNRNCGFVSFETRPQAESAKNSLDGKSFYGMVIRIGWGKA 160 P + + F+ F+ A AK ++ G+ G I+IG+GKA Sbjct 302 RP----ARGQGGAYAFLKFQNLDMAHRAKVAMQGRMINGNPIKIGYGKA 346 > dre:100136872 rbm15b, zgc:175165; RNA binding motif protein 15B Length=402 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%) Query 74 EKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETR 133 ++ ++ NL++GNL ITE L Q F K+G+I V I P + + F+ F+ Sbjct 36 DQRATRNLFIGNLDHNITEVELRQGFDKYGIIEEVVIKRP----ARGQGGAYAFLKFQNL 91 Query 134 PQAESAKNSLDGKSFYGMVIRIGWGKA 160 A AK ++ G+ G I+IG+GKA Sbjct 92 DMAHRAKVAMQGRMINGNPIKIGYGKA 118 > ath:AT1G47500 ATRBP47C' (RNA-binding protein 47C'); RNA binding Length=434 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 9/82 (10%) Query 78 STNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAE 137 +T +++G L +T+E L Q F + G I SVKI + CGFV F RP AE Sbjct 305 NTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPV---------GKGCGFVQFVNRPNAE 355 Query 138 SAKNSLDGKSFYGMVIRIGWGK 159 A L+G +R+ WG+ Sbjct 356 EALEKLNGTVIGKQTVRLSWGR 377 > ath:AT1G49600 ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a); RNA binding Length=445 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 10/89 (11%) Query 72 DLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFE 131 D E +ST +++G L ++TEE L Q F G + SVKI + CGFV F Sbjct 321 DGESNNST-IFVGGLDADVTEEDLMQPFSDFGEVVSVKIPV---------GKGCGFVQFA 370 Query 132 TRPQAESAKNSLDGKSFYGMVIRIGWGKA 160 R AE A +L+G +R+ WG++ Sbjct 371 NRQSAEEAIGNLNGTVIGKNTVRLSWGRS 399 Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 22/227 (9%) Query 18 SFLEEIKKRQELQGQKRRLYERLNLSRTEEERCALRFQIAALENATRP---RGAPPIDLE 74 S ++ I+ +Q Q + E L SR+ E F + NA +P A E Sbjct 146 SSVKVIRNKQTCQSEGYGFVEFL--SRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGE 203 Query 75 KESSTN-----LYLGNLSPEITEEFLCQQF-GKHGVITSVKIMYPRTEEEKRRNRNCGFV 128 K +S N +++G+L+P++++ L + F G++ + K++ + R++ GFV Sbjct 204 KRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVV---IDSNTGRSKGYGFV 260 Query 129 SFETRPQAESAKNSLDGKSFYGMVIRIGWGKALRPAF-----GATPTGLSGGFSDSPFPS 183 F + A ++G +R+G R A G+ L+GG + S Sbjct 261 RFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMS 320 Query 184 SGFSPPPP---SAFSAEVPTATPTPPPPPEAELVEVQVPKDRKVKMV 227 G S A+V P E+V V++P + V Sbjct 321 DGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFV 367 > hsa:378951 RBMY1J; RNA binding motif protein, Y-linked, family 1, member J Length=496 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 6/93 (6%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 +E + L++G L+ E E+ L FGKHG I+ V ++ RT ++R F++FE Sbjct 2 VEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTS----KSRGFAFITFEN 57 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKALRPAF 165 A++A ++G S +G I++ +A +P+F Sbjct 58 PADAKNAAKDMNGTSLHGKAIKV--EQAKKPSF 88 > hsa:159163 RBMY1F, MGC33094, YRRM2; RNA binding motif protein, Y-linked, family 1, member F Length=496 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 6/93 (6%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 +E + L++G L+ E E+ L FGKHG I+ V ++ RT ++R F++FE Sbjct 2 VEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTS----KSRGFAFITFEN 57 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKALRPAF 165 A++A ++G S +G I++ +A +P+F Sbjct 58 PADAKNAAKDMNGTSLHGKAIKV--EQAKKPSF 88 > ath:AT1G54080 UBP1A; oligouridylate-binding protein, putative; K13201 nucleolysin TIA-1/TIAR Length=426 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Query 74 EKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETR 133 + S N+++G+LSPE+T+ L F + ++M+ +++ R+R GFVSF + Sbjct 143 DTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMW---DQKTGRSRGFGFVSFRNQ 199 Query 134 PQAESAKNSLDGKSFYGMVIRIGW 157 A++A N ++GK IR W Sbjct 200 QDAQTAINEMNGKWVSSRQIRCNW 223 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 7/96 (7%) Query 65 PRGAPPIDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRN 124 P G P + + ++Y GN+ ++TE L + F G I S K++ ++ + Sbjct 49 PSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLI-------RKDKSS 101 Query 125 CGFVSFETRPQAESAKNSLDGKSFYGMVIRIGWGKA 160 GFV + R A A +L+G+ +G +++ W A Sbjct 102 YGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYA 137 Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 12/89 (13%) Query 79 TNLYLGNLSPEITEEFLCQQFGK--HGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQA 136 T +Y+GNLSPE+T+ L + F GVI V++ +R++ GFV + T +A Sbjct 269 TTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRV---------QRDKGFGFVRYNTHDEA 319 Query 137 ESAKNSLDGKSF-YGMVIRIGWGKALRPA 164 A + + F + IR WG P+ Sbjct 320 ALAIQMGNAQPFLFSRQIRCSWGNKPTPS 348 > mmu:19655 Rbmx; RNA binding motif protein, X chromosome; K12885 heterogeneous nuclear ribonucleoprotein G Length=391 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 5/100 (5%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 +E + L++G L+ E E+ L FGK+G I V +M + E ++R FV+FE+ Sbjct 2 VEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLM---KDRETNKSRGFAFVTFES 58 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKALRPAFGATPTGL 172 A+ A ++GKS G I++ +A +P+F + GL Sbjct 59 PADAKDAARDMNGKSLDGKAIKV--EQATKPSFESGRRGL 96 > mmu:18458 Pabpc1, PABP, Pabp1, PabpI, Pabpl1, ePAB; poly(A) binding protein, cytoplasmic 1; K13126 polyadenylate-binding protein Length=636 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%) Query 79 TNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAES 138 TN+Y+ N ++ +E L + FGK G SVK+M +E +++ GFVSFE A+ Sbjct 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVM----TDESGKSKGFGFVSFERHEDAQK 246 Query 139 AKNSLDGKSFYGMVIRIG 156 A + ++GK G I +G Sbjct 247 AVDEMNGKELNGKQIYVG 264 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Query 80 NLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESA 139 +LY+G+L P++TE L ++F G I S+++ + RR+ +V+F+ AE A Sbjct 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVC---RDMITRRSLGYAYVNFQQPADAERA 68 Query 140 KNSLDGKSFYGMVIRIGWGK 159 ++++ G +RI W + Sbjct 69 LDTMNFDVIKGKPVRIMWSQ 88 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%) Query 79 TNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAES 138 NLY+ NL I +E L ++F G ITS K+M E R++ GFV F + +A Sbjct 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM-----EGGRSKGFGFVCFSSPEEATK 348 Query 139 AKNSLDGK 146 A ++G+ Sbjct 349 AVTEMNGR 356 Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 5/88 (5%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 L K N+++ NL I + L F G I S K++ ++ ++ GFV FET Sbjct 93 LRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-----DENGSKGYGFVHFET 147 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKA 160 + AE A ++G + +G K+ Sbjct 148 QEAAERAIEKMNGMLLNDRKVFVGRFKS 175 > sce:YNL016W PUB1, RNP1; Poly (A)+ RNA-binding protein, abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; K13201 nucleolysin TIA-1/TIAR Length=453 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%) Query 81 LYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESAK 140 LY+GNL ITE+ L Q F G I ++KIM ++ +N N FV + A A Sbjct 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMI----DKNNKNVNYAFVEYHQSHDANIAL 132 Query 141 NSLDGKSFYGMVIRIGW 157 +L+GK +++I W Sbjct 133 QTLNGKQIENNIVKINW 149 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Query 76 ESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQ 135 + + NL++G+L+ + +E L F S +M+ + + +R GFVSF ++ Sbjct 159 DDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMW---DMQTGSSRGYGFVSFTSQDD 215 Query 136 AESAKNSLDGKSFYGMVIRIGW 157 A++A +S+ G+ G +RI W Sbjct 216 AQNAMDSMQGQDLNGRPLRINW 237 Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 15/94 (15%) Query 66 RGAPPIDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNC 125 R APP T Y+GN+ TE L F G I K YP + C Sbjct 334 RSAPP------RVTTAYIGNIPHFATEADLIPLFQNFGFILDFK-HYPE--------KGC 378 Query 126 GFVSFETRPQAESAKNSLDGKSFYGMVIRIGWGK 159 F+ ++T QA +L F G +R GWGK Sbjct 379 CFIKYDTHEQAAVCIVALANFPFQGRNLRTGWGK 412 > hsa:64783 RBM15, FLJ12479, FLJ21943, MGC119584, OTT, OTT1, SPEN; RNA binding motif protein 15; K13190 RNA-binding protein 15 Length=969 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query 74 EKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETR 133 ++ ++ L+LGNL +TE L + F + GVIT V I P + + GF+ FE Sbjct 369 DQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRP----SRGQTSTYGFLKFENL 424 Query 134 PQAESAKNSLDGKSFYGMVIRIGWGKA 160 + AK ++ GK I+IG+GKA Sbjct 425 DMSHRAKLAMSGKIIIRNPIKIGYGKA 451 > ath:AT4G13860 glycine-rich RNA-binding protein, putative Length=87 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Query 78 STNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAE 137 +T +Y+GNLSP T++ L + F +G + +M R + R+R GFV++ + +AE Sbjct 2 ATRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTD---RSRGFGFVTYSSHSEAE 58 Query 138 SAKNSLDGKSFYGMVIRI 155 +A + +DGK G + + Sbjct 59 AAVSGMDGKELNGRRVSV 76 > mmu:229700 Rbm15, C230088J01Rik, KIAA1438, mKIAA1438; RNA binding motif protein 15; K13190 RNA-binding protein 15 Length=962 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query 74 EKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETR 133 ++ ++ L+LGNL +TE L + F + GVIT V I P + + GF+ FE Sbjct 368 DQRANRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRP----SRGQTSTYGFLKFENL 423 Query 134 PQAESAKNSLDGKSFYGMVIRIGWGKA 160 + AK ++ GK I+IG+GKA Sbjct 424 DMSHRAKLAMSGKIIIRNPIKIGYGKA 450 > ath:AT1G49760 PAB8; PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor; K13126 polyadenylate-binding protein Length=671 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query 74 EKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETR 133 EK TN+Y+ NLS +++E L + FG+ GV TS IM + + +++ GFV+FE Sbjct 219 EKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIM----RDGEGKSKGFGFVNFENS 274 Query 134 PQAESAKNSLDGKSF 148 A A ++L+GK+F Sbjct 275 DDAARAVDALNGKTF 289 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query 74 EKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETR 133 +K +NLY+ NL +T++ L + F G ITS K+M + +R GFV+F T Sbjct 322 DKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVM----RDPSGVSRGSGFVAFSTP 377 Query 134 PQAESAKNSLDGK 146 +A A ++GK Sbjct 378 EEATRAITEMNGK 390 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%) Query 75 KESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRP 134 ++ +T+LY+G+L +T+ L + F + G + SV++ T RR+ G+V++ T Sbjct 41 QQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMT---TRRSLGYGYVNYATPQ 97 Query 135 QAESAKNSLDGKSFYGMVIRIGW 157 A A N L+ + G IR+ + Sbjct 98 DASRALNELNFMALNGRAIRVMY 120 Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 L K N+++ NL I + L + F G I S K+ + +++ GFV ++T Sbjct 127 LRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCKVAV----DPSGQSKGYGFVQYDT 182 Query 133 RPQAESAKNSLDGKSFYGMVIRIG 156 A+ A + L+G + +G Sbjct 183 DEAAQGAIDKLNGMLLNDKQVYVG 206 > ath:AT5G61030 GR-RBP3 (glycine-rich RNA-binding protein 3); ATP binding / RNA binding Length=309 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 3/81 (3%) Query 77 SSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQA 136 SS+ L++G ++ + E+ L + F K+G + +++ R E R+R GFV+F + A Sbjct 38 SSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDR---ETGRSRGFGFVTFTSSEAA 94 Query 137 ESAKNSLDGKSFYGMVIRIGW 157 SA +LDG+ +G V+++ + Sbjct 95 SSAIQALDGRDLHGRVVKVNY 115 > hsa:26986 PABPC1, PAB1, PABP, PABP1, PABPC2, PABPL1; poly(A) binding protein, cytoplasmic 1; K13126 polyadenylate-binding protein Length=636 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%) Query 79 TNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAES 138 TN+Y+ N ++ +E L FGK G SVK+M +E +++ GFVSFE A+ Sbjct 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM----TDESGKSKGFGFVSFERHEDAQK 246 Query 139 AKNSLDGKSFYGMVIRIG 156 A + ++GK G I +G Sbjct 247 AVDEMNGKELNGKQIYVG 264 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Query 80 NLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESA 139 +LY+G+L P++TE L ++F G I S+++ + RR+ +V+F+ AE A Sbjct 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVC---RDMITRRSLGYAYVNFQQPADAERA 68 Query 140 KNSLDGKSFYGMVIRIGWGK 159 ++++ G +RI W + Sbjct 69 LDTMNFDVIKGKPVRIMWSQ 88 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%) Query 79 TNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAES 138 NLY+ NL I +E L ++F G ITS K+M E R++ GFV F + +A Sbjct 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM-----EGGRSKGFGFVCFSSPEEATK 348 Query 139 AKNSLDGK 146 A ++G+ Sbjct 349 AVTEMNGR 356 Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 5/88 (5%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 L K N+++ NL I + L F G I S K++ ++ ++ GFV FET Sbjct 93 LRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-----DENGSKGYGFVHFET 147 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKA 160 + AE A ++G + +G K+ Sbjct 148 QEAAERAIEKMNGMLLNDRKVFVGRFKS 175 > mmu:18459 Pabpc2, PABP, PABP+, Pabp2; poly(A) binding protein, cytoplasmic 2; K13126 polyadenylate-binding protein Length=628 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%) Query 79 TNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAES 138 TN+Y+ N + +E L FG+ G I SVK+M +E +++ GFVSFE A+ Sbjct 191 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVM----TDEGGKSKGFGFVSFERHEDAQK 246 Query 139 AKNSLDGKSFYGMVIRIG 156 A + ++GK G I +G Sbjct 247 AVDEMNGKELNGKHIYVG 264 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%) Query 80 NLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESA 139 +LY+G+L P++TE L ++F G I S+++ + RR+ V+FE AE A Sbjct 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVY---RDVITRRSLGYASVNFEQPADAERA 68 Query 140 KNSLDGKSFYGMVIRIGWGK 159 ++++ G +RI W + Sbjct 69 LDTMNFDVIKGKPVRIMWSQ 88 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Query 80 NLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESA 139 NLY+ NL I +E L ++F G ITS K+M E R++ GFV F + +A A Sbjct 295 NLYVKNLDDGIDDERLQKEFSPFGTITSTKVM-----TEGGRSKGFGFVCFSSPEEATKA 349 Query 140 KNSLDGK 146 + ++G+ Sbjct 350 VSEMNGR 356 Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 L + N+++ NL+ I + L F G I S K++ ++ ++ GFV FET Sbjct 93 LRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVV-----SDENGSKGHGFVHFET 147 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKA 160 AE A ++G + +G K+ Sbjct 148 EEAAERAIEKMNGMLLNDRKVFVGRFKS 175 > dre:798517 rbm15, im:7139999; RNA binding motif protein 15; K13190 RNA-binding protein 15 Length=853 Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query 74 EKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETR 133 ++ ++ L+LGNL +TE L + F + G IT V I P + ++ GF+ FE Sbjct 299 DQRANRTLFLGNLDITVTENDLRRAFERFGTITEVDIKRP----TRGQSSTYGFLKFENL 354 Query 134 PQAESAKNSLDGKSFYGMVIRIGWGKA 160 A AK S+ GK I+IG+GKA Sbjct 355 DMAHRAKISMSGKVVGRNPIKIGYGKA 381 > xla:379761 cirbp-a, MGC52663, XCIRP, XCIRP-1, cirbp, cirp, cirp-1; cold inducible RNA binding protein Length=166 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Query 81 LYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESAK 140 L++G L+ E E+ L Q F K+G I+ V ++ R E +R+R GFV+FE A+ A Sbjct 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDR---ETKRSRGFGFVTFENVDDAKDAM 63 Query 141 NSLDGKSFYGMVIRI 155 +++GKS G IR+ Sbjct 64 MAMNGKSVDGRQIRV 78 > mmu:19656 Rbmxrt, Hnrpg, MGC102184, Rbmx, Rbmxl1; RNA binding motif protein, X chromosome retrogene; K12885 heterogeneous nuclear ribonucleoprotein G Length=388 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 5/93 (5%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 +E + L++G L+ E E+ L FGK+G I + +M + E ++R FV+FE+ Sbjct 2 VEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLM---KDRETNKSRGFAFVTFES 58 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKALRPAF 165 A+ A ++GKS G I++ +A +P+F Sbjct 59 PADAKDAARDMNGKSLDGKAIKV--EQATKPSF 89 > ath:AT5G54900 ATRBP45A (RNA-binding protein 45A); RNA binding Length=387 Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 19/157 (12%) Query 48 ERCALRFQIAALENATRPRGAPPIDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITS 107 + AL Q A +N +GA D + ++T +++G L +T++ L FG+ G + Sbjct 233 NKNALPMQPAMYQNT---QGANAGDNDPNNTT-IFVGGLDANVTDDELKSIFGQFGELLH 288 Query 108 VKIMYPRTEEEKRRNRNCGFVSFETRPQAESAKNSLDGKSFYGMVIRIGWGKALRPAFGA 167 VKI + CGFV + + AE A + L+G G IR+ WG++ Sbjct 289 VKI---------PPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQ 339 Query 168 TPTGLSGGFSDSPFPSSGFSPPPPSAFSAEVPTATPT 204 G + P P G+ ++A+ PT P Sbjct 340 AQWNGGGYYGYPPQPQGGY------GYAAQPPTQDPN 370 Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query 81 LYLGNLSPEITEEFLCQQFGK-HGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESA 139 +++G+L+PE+T+ L F +G + K++ RT R++ GFV F + A Sbjct 156 IFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRT---TGRSKGYGFVRFADENEQMRA 212 Query 140 KNSLDGKSFYGMVIRIG 156 ++G+ +RIG Sbjct 213 MTEMNGQYCSTRPMRIG 229 > mmu:76572 Rbmxl2, 1700012H05Rik, HNRNPG-T; RNA binding motif protein, X-linked-like 2 Length=385 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 5/93 (5%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 +E + L++G L+ E E+ L FGK+G I V +M + E ++R FV+FE Sbjct 2 VEADRPGKLFIGGLNLETDEKGLETAFGKYGRIIEVLLM---KDRETSKSRGFAFVTFEN 58 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKALRPAF 165 A++A ++GKS G I++ +A +P F Sbjct 59 PADAKAAARDMNGKSLDGKAIKV--AQATKPVF 89 > mmu:12696 Cirbp, Cirp, R74941; cold inducible RNA binding protein; K13195 cold-inducible RNA-binding protein Length=172 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Query 81 LYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESAK 140 L++G LS + E+ L Q F K+G I+ V ++ R E +R+R GFV+FE A+ A Sbjct 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDR---ETQRSRGFGFVTFENIDDAKDAM 64 Query 141 NSLDGKSFYGMVIRI 155 +++GKS G IR+ Sbjct 65 MAMNGKSVDGRQIRV 79 > hsa:1153 CIRBP, CIRP; cold inducible RNA binding protein; K13195 cold-inducible RNA-binding protein Length=172 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Query 81 LYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESAK 140 L++G LS + E+ L Q F K+G I+ V ++ R E +R+R GFV+FE A+ A Sbjct 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR---ETQRSRGFGFVTFENIDDAKDAM 64 Query 141 NSLDGKSFYGMVIRI 155 +++GKS G IR+ Sbjct 65 MAMNGKSVDGRQIRV 79 > xla:379896 pabpc1-a, MGC53109, pab1, pabp, pabp1, pabpc1, pabpc2; poly(A) binding protein, cytoplasmic 1; K13126 polyadenylate-binding protein Length=633 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 4/78 (5%) Query 79 TNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAES 138 TN+Y+ N ++ +E L + FGK+G SVK+M ++ +++ GFVSFE A+ Sbjct 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVM----TDDNGKSKGFGFVSFERHEDAQK 246 Query 139 AKNSLDGKSFYGMVIRIG 156 A + + GK G + +G Sbjct 247 AVDEMYGKDMNGKSMFVG 264 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 36/186 (19%) Query 19 FLEEIKKRQELQGQKRRLYERLNLSRTEEERCALRFQIAALENATRPRGAPPIDLEKESS 78 F+ +K+ E Q + +R +E++N R TR +G Sbjct 262 FVGRAQKKVERQTELKRKFEQMNQDRI-----------------TRYQG----------- 293 Query 79 TNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAES 138 NLY+ NL I +E L ++F G ITS K+M E R++ GFV F + +A Sbjct 294 VNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMM-----EGGRSKGFGFVCFSSPEEATK 348 Query 139 AKNSLDGKSFYG--MVIRIGWGKALRPAFGATPTGLSGGFSDSPFPSSG-FSPPPPSAFS 195 A ++G+ + + + K R A P P + PPP S F Sbjct 349 AVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRVPNPVINPYQPPPSSYFM 408 Query 196 AEVPTA 201 A +P A Sbjct 409 AAIPPA 414 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%) Query 80 NLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESA 139 +LY+G+L ++TE L ++F G I S+++ + RR+ +V+F+ AE A Sbjct 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVC---RDMITRRSLGYAYVNFQQPADAERA 68 Query 140 KNSLDGKSFYGMVIRIGWGK 159 ++++ G +RI W + Sbjct 69 LDTMNFDVIKGRPVRIMWSQ 88 Score = 38.5 bits (88), Expect = 0.058, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 5/88 (5%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 L K N+++ NL I + L F G I S K++ ++ ++ GFV FET Sbjct 93 LRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-----DENGSKGYGFVHFET 147 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKA 160 + AE A + ++G + +G K+ Sbjct 148 QEAAERAIDKMNGMLLNDRKVFVGRFKS 175 > ath:AT5G19960 RNA recognition motif (RRM)-containing protein Length=337 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%) Query 76 ESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQ 135 + ++Y+G L +ITEE + + F +G + +VKI+ R+ R + GFV+F R Sbjct 4 DDGNSVYVGGLPYDITEEAVRRVFSIYGSVLTVKIVNDRSV----RGKCYGFVTFSNRRS 59 Query 136 AESAKNSLDGKSFYGMVIRI 155 A+ A +DGKS G +R+ Sbjct 60 ADDAIEDMDGKSIGGRAVRV 79 > ath:AT3G19130 ATRBP47B (RNA-binding protein 47B); RNA binding Length=435 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%) Query 78 STN--LYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQ 135 STN +++G + P++ +E L Q F + G + SVKI + CGFV F R Sbjct 318 STNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPV---------GKGCGFVQFADRKS 368 Query 136 AESAKNSLDGKSFYGMVIRIGWGKALRPAF-GATPTGLSGGFS 177 AE A SL+G +R+ WG++ + G + +GG+S Sbjct 369 AEDAIESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGYS 411 Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust. Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 4/85 (4%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFG-KHGVITSVKIMYPRTEEEKRRNRNCGFVSFE 131 +E ++++G+LSP++T+ L + F ++ + S K++ + R++ GFV F Sbjct 196 VENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVV---IDSNTGRSKGYGFVRFG 252 Query 132 TRPQAESAKNSLDGKSFYGMVIRIG 156 + A ++G +R+G Sbjct 253 DENERSRALTEMNGAYCSNRQMRVG 277 > dre:393856 pabpc1b, MGC77608, pabpc1, zgc:77608; poly A binding protein, cytoplasmic 1 b; K13126 polyadenylate-binding protein Length=634 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%) Query 79 TNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAES 138 TN+Y+ N ++ ++ L F K+G S+++M +E ++R GFVSFE A+ Sbjct 191 TNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVM----TDENGKSRGFGFVSFERHEDAQR 246 Query 139 AKNSLDGKSFYGMVIRIG 156 A + ++GK G +I +G Sbjct 247 AVDEMNGKEMNGKLIYVG 264 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%) Query 80 NLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFETRPQAESA 139 +LY+G+L ++TE L ++F G I S+++ + RR+ +V+F+ AE A Sbjct 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVC---RDMITRRSLGYAYVNFQQPADAERA 68 Query 140 KNSLDGKSFYGMVIRIGWGK 159 ++++ G +RI W + Sbjct 69 LDTMNFDVIKGRPVRIMWSQ 88 Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 + + NLY+ NL I +E L ++F G ITS K+M + R++ GFV F + Sbjct 288 MTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM-----DGGRSKGFGFVCFSS 342 Query 133 RPQAESAKNSLDGK 146 +A A ++G+ Sbjct 343 PEEATKAVTEMNGR 356 Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 5/88 (5%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 L K N+++ NL I + L F G I S K++ ++ ++ GFV FET Sbjct 93 LRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC-----DENGSKGYGFVHFET 147 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKA 160 + AE A ++G + +G K+ Sbjct 148 QEAAERAIEKMNGMLLNDRKVFVGRFKS 175 > hsa:494115 RBMXL1, DKFZp547N1117, DKFZp667D0223, FLJ32614, RBM1; RNA binding motif protein, X-linked-like 1; K12885 heterogeneous nuclear ribonucleoprotein G Length=390 Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 5/93 (5%) Query 73 LEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRRNRNCGFVSFET 132 +E + L++G L+ E E+ L FGK+G I V ++ + E ++R FV+FE+ Sbjct 2 VEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLI---KDRETNKSRGFAFVTFES 58 Query 133 RPQAESAKNSLDGKSFYGMVIRIGWGKALRPAF 165 A+ A ++GKS G I++ +A +P+F Sbjct 59 PADAKDAARDMNGKSLDGKAIKV--EQATKPSF 89 Lambda K H 0.316 0.133 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22613356868 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40