bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_2405_orf1
Length=108
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_042330 40S ribosomal protein S5, putative ; K02989 ... 131 5e-31
bbo:BBOV_I000230 16.m00772; 40S ribosomal protein S5; K02989 s... 127 6e-30
pfa:PF07_0088 40S ribosomal protein S5, putative; K02989 small... 127 1e-29
tpv:TP03_0860 40S ribosomal protein S5; K02989 small subunit r... 126 2e-29
cpv:cgd6_4320 40S ribosomal protein S5 ; K02989 small subunit ... 125 4e-29
ath:AT3G11940 ATRPS5A (RIBOSOMAL PROTEIN 5A); structural const... 120 1e-27
ath:AT2G37270 ATRPS5B (RIBOSOMAL PROTEIN 5B); structural const... 118 4e-27
mmu:20103 Rps5, AA617411; ribosomal protein S5; K02989 small s... 117 1e-26
hsa:6193 RPS5; ribosomal protein S5; K02989 small subunit ribo... 117 1e-26
dre:100332601 ribosomal protein S5-like 117 1e-26
dre:751723 MGC153322; zgc:153322; K02989 small subunit ribosom... 116 2e-26
cel:T05E11.1 rps-5; Ribosomal Protein, Small subunit family me... 115 3e-26
xla:379490 rps5, MGC64490; ribosomal protein S5; K02989 small ... 115 4e-26
dre:192297 rps5, chunp6933, fc74e05, fj57h03, wu:fc74e05, wu:f... 115 5e-26
sce:YJR123W RPS5; Rps5p; K02989 small subunit ribosomal protei... 99.4 3e-21
ath:AT1G19290 hypothetical protein 29.6 2.1
tgo:TGME49_090680 hypothetical protein 29.6 2.4
mmu:100503803 uncharacterized protein C2orf16-like 29.6 2.4
> tgo:TGME49_042330 40S ribosomal protein S5, putative ; K02989
small subunit ribosomal protein S5e
Length=192
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/70 (88%), Positives = 68/70 (97%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+GSAGVVRRQAVDVSPLRRVNQAIYLICTGAR AAFRN ++++ECLADEIMNCAKESSN+
Sbjct 116 IGSAGVVRRQAVDVSPLRRVNQAIYLICTGARLAAFRNIKTIAECLADEIMNCAKESSNA 175
Query 99 YAIKKKDEIE 108
YAIKKKDEIE
Sbjct 176 YAIKKKDEIE 185
> bbo:BBOV_I000230 16.m00772; 40S ribosomal protein S5; K02989
small subunit ribosomal protein S5e
Length=192
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/70 (87%), Positives = 67/70 (95%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+GSAGVVRRQAVDVSPLRRVNQAIYLICTGAR AAFRN ++++ECLADEIMNCAKES +S
Sbjct 116 IGSAGVVRRQAVDVSPLRRVNQAIYLICTGARNAAFRNIKTIAECLADEIMNCAKESPSS 175
Query 99 YAIKKKDEIE 108
YAIKKKDEIE
Sbjct 176 YAIKKKDEIE 185
> pfa:PF07_0088 40S ribosomal protein S5, putative; K02989 small
subunit ribosomal protein S5e
Length=195
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/70 (87%), Positives = 67/70 (95%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+GSAGVVRRQAVDVSPLRRVNQAIYLICTGAR AAFRN +S+SECLA+EI+NCA ESS+S
Sbjct 119 IGSAGVVRRQAVDVSPLRRVNQAIYLICTGARNAAFRNIKSISECLAEEIINCANESSSS 178
Query 99 YAIKKKDEIE 108
YAIKKKDEIE
Sbjct 179 YAIKKKDEIE 188
> tpv:TP03_0860 40S ribosomal protein S5; K02989 small subunit
ribosomal protein S5e
Length=193
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/70 (85%), Positives = 67/70 (95%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+GSAGVVRRQAVDVSPLRRVNQAIYLICTGAR AAFRN ++++ECLADEI+NCAKES +S
Sbjct 117 IGSAGVVRRQAVDVSPLRRVNQAIYLICTGARNAAFRNIKTIAECLADEIINCAKESPSS 176
Query 99 YAIKKKDEIE 108
YAIKKKDEIE
Sbjct 177 YAIKKKDEIE 186
> cpv:cgd6_4320 40S ribosomal protein S5 ; K02989 small subunit
ribosomal protein S5e
Length=207
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/71 (81%), Positives = 67/71 (94%), Gaps = 0/71 (0%)
Query 38 AVGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSN 97
++GSAG VRRQAVDVSPLRRVNQAIYLICTGART AFRN ++++ECLADEIMNCAKE+ N
Sbjct 130 SIGSAGAVRRQAVDVSPLRRVNQAIYLICTGARTQAFRNIKTIAECLADEIMNCAKENPN 189
Query 98 SYAIKKKDEIE 108
SYAIK+KDE+E
Sbjct 190 SYAIKRKDEVE 200
> ath:AT3G11940 ATRPS5A (RIBOSOMAL PROTEIN 5A); structural constituent
of ribosome
Length=207
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 65/70 (92%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+GSAGVVRRQAVD+SPLRRVNQAI+LI TGAR AAFRN ++++ECLADE++N AK SSNS
Sbjct 131 IGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAKGSSNS 190
Query 99 YAIKKKDEIE 108
YAIKKKDEIE
Sbjct 191 YAIKKKDEIE 200
> ath:AT2G37270 ATRPS5B (RIBOSOMAL PROTEIN 5B); structural constituent
of ribosome; K02989 small subunit ribosomal protein
S5e
Length=207
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 65/70 (92%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+GSAGVVRRQAVD+SPLRRVNQAI+L+ TGAR AAFRN ++++ECLADE++N AK SSNS
Sbjct 131 IGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNS 190
Query 99 YAIKKKDEIE 108
YAIKKKDEIE
Sbjct 191 YAIKKKDEIE 200
> mmu:20103 Rps5, AA617411; ribosomal protein S5; K02989 small
subunit ribosomal protein S5e
Length=204
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 64/70 (91%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+G AG VRRQAVDVSPLRRVNQAI+L+CTGAR AAFRN ++++ECLADE++N AK SSNS
Sbjct 128 IGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNS 187
Query 99 YAIKKKDEIE 108
YAIKKKDE+E
Sbjct 188 YAIKKKDELE 197
> hsa:6193 RPS5; ribosomal protein S5; K02989 small subunit ribosomal
protein S5e
Length=204
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 64/70 (91%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+G AG VRRQAVDVSPLRRVNQAI+L+CTGAR AAFRN ++++ECLADE++N AK SSNS
Sbjct 128 IGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNS 187
Query 99 YAIKKKDEIE 108
YAIKKKDE+E
Sbjct 188 YAIKKKDELE 197
> dre:100332601 ribosomal protein S5-like
Length=204
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 64/70 (91%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+G AG VRRQAVDVSPLRRVNQAI+L+CTGAR AAFRN ++++ECLADE++N AK SSNS
Sbjct 128 IGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNS 187
Query 99 YAIKKKDEIE 108
YAIKKKDE+E
Sbjct 188 YAIKKKDELE 197
> dre:751723 MGC153322; zgc:153322; K02989 small subunit ribosomal
protein S5e
Length=201
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 64/70 (91%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+G AG VRRQAVDVSPLRRVNQAI+L+CTGAR AAFRN ++++ECLADE++N AK SSNS
Sbjct 125 IGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNS 184
Query 99 YAIKKKDEIE 108
YAIKKKDE+E
Sbjct 185 YAIKKKDELE 194
> cel:T05E11.1 rps-5; Ribosomal Protein, Small subunit family
member (rps-5); K02989 small subunit ribosomal protein S5e
Length=210
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 64/70 (91%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+G AG VRRQAVDV+PLRRVNQAI+L+CTGAR AAFRN ++++ECLADE++N AK SSNS
Sbjct 134 IGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNS 193
Query 99 YAIKKKDEIE 108
YAIKKKDE+E
Sbjct 194 YAIKKKDELE 203
> xla:379490 rps5, MGC64490; ribosomal protein S5; K02989 small
subunit ribosomal protein S5e
Length=203
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 64/70 (91%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+G AG VRRQAVDVSPLRRVNQAI+L+CTGAR AAFRN ++++EC+ADE++N AK SSNS
Sbjct 127 IGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 186
Query 99 YAIKKKDEIE 108
YAIKKKDE+E
Sbjct 187 YAIKKKDELE 196
> dre:192297 rps5, chunp6933, fc74e05, fj57h03, wu:fc74e05, wu:fj57h03;
ribosomal protein S5; K02989 small subunit ribosomal
protein S5e
Length=204
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 63/70 (90%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
+G AG VRRQAVDVSPLRRVNQAI+L+CTGAR AAFRN ++++ECLADE++N AK S NS
Sbjct 128 IGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSYNS 187
Query 99 YAIKKKDEIE 108
YAIKKKDE+E
Sbjct 188 YAIKKKDELE 197
> sce:YJR123W RPS5; Rps5p; K02989 small subunit ribosomal protein
S5e
Length=225
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 57/70 (81%), Gaps = 0/70 (0%)
Query 39 VGSAGVVRRQAVDVSPLRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESSNS 98
VG G RRQAVDVSPLRRVNQAI L+ GAR AAFRN ++++E LA+E++N AK SS S
Sbjct 149 VGGGGAARRQAVDVSPLRRVNQAIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTS 208
Query 99 YAIKKKDEIE 108
YAIKKKDE+E
Sbjct 209 YAIKKKDELE 218
> ath:AT1G19290 hypothetical protein
Length=904
Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query 15 QGQGRGPDAPHRRQVPEKAL--PEGAVGSAGVVRRQAVDVSPLRRVNQAI 62
+G RG D +P++ + PE +GS GV+ + ++ +RRV++A+
Sbjct 854 KGLVRGSDKQGDVDIPKEVVLDPEVKLGSTGVIEMNSNELYDVRRVSEAV 903
> tgo:TGME49_090680 hypothetical protein
Length=2830
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query 25 HRRQVPEKALPEGAVGSAGVVRRQAVDVSPLR 56
H ++VPE+ LP A SA VRR V V PLR
Sbjct 84 HLQEVPERLLPSSA--SAHAVRRSLVHVPPLR 113
> mmu:100503803 uncharacterized protein C2orf16-like
Length=1758
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query 40 GSAGVVRRQAVDVSP-LRRVNQAIYLICTGARTAAFRNPESMSECLADEIMNCAKESS 96
GS V++ + ++S L+ V + + + CTGAR A R ES SE L + ++E S
Sbjct 890 GSRLGVKKTSSNLSNILQDVTEHVSVSCTGARFPALRKSESNSEILYTREGSLSREQS 947
Lambda K H
0.319 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2003209916
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40