bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_2474_orf3
Length=135
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_050810 ribosomal protein L35, putative ; K02918 lar... 166 2e-41
mmu:66489 Rpl35, 2410039E09Rik; ribosomal protein L35; K02918 ... 112 4e-25
mmu:100038991 Gm2000; predicted gene 2000; K02918 large subuni... 112 4e-25
ath:AT3G09500 60S ribosomal protein L35 (RPL35A); K02918 large... 110 2e-24
hsa:11224 RPL35; ribosomal protein L35; K02918 large subunit r... 109 2e-24
dre:192299 rpl35, CHUNP6863; ribosomal protein L35; K02918 lar... 109 3e-24
ath:AT5G02610 60S ribosomal protein L35 (RPL35D); K02918 large... 107 9e-24
mmu:100040823 Gm10269; ribosomal protein L35 pseudogene 106 2e-23
ath:AT2G39390 60S ribosomal protein L35 (RPL35B); K02918 large... 105 3e-23
xla:734664 rpl35, MGC116425; ribosomal protein L35; K02918 lar... 105 4e-23
bbo:BBOV_IV008090 23.m06046; ribosomal protein L35; K02918 lar... 103 1e-22
ath:AT3G55170 60S ribosomal protein L35 (RPL35C); K02918 large... 103 1e-22
sce:YDL136W RPL35B, SOS2; L35B; K02918 large subunit ribosomal... 96.3 3e-20
sce:YDL191W RPL35A, SOS1; L35A; K02918 large subunit ribosomal... 96.3 3e-20
cel:ZK652.4 rpl-35; Ribosomal Protein, Large subunit family me... 95.9 3e-20
tpv:TP01_0964 60S ribosomal protein L35; K02918 large subunit ... 95.5 4e-20
cpv:cgd3_830 60S ribosomal protein L35 ; K02918 large subunit ... 93.2 2e-19
pfa:PF11_0260 60S ribosomal protein L35, putative; K02918 larg... 82.8 3e-16
mmu:383538 Gm5258, EG383538; predicted gene 5258 57.4
ath:AT5G65220 ribosomal protein L29 family protein 33.1 0.26
ath:AT3G06000 leucine-rich repeat family protein 31.2 0.86
sce:YGR245C SDA1; Highly conserved nuclear protein required fo... 30.8 1.2
ath:AT5G62650 hypothetical protein 30.8 1.3
hsa:83706 FERMT3, KIND3, MGC10966, MIG-2, MIG2B, UNC112C, URP2... 29.6 2.9
dre:436806 rab11fip4a, rab11fip4, zgc:92911; RAB11 family inte... 29.6 3.0
dre:566084 hypothetical LOC566084 29.3 3.4
eco:b1939 fliG, ECK1937, flaAII.2, flaBII, JW1923; flagellar m... 29.3 3.7
xla:398304 ncor1; nuclear receptor corepressor 1; K04650 nucle... 29.3 3.8
ath:AT3G57300 INO80; INO80 (INO80 ORTHOLOG); ATP binding / DNA... 28.9 4.3
mmu:20185 Ncor1, 5730405M06Rik, A230020K14Rik, N-CoR, RIP13, R... 28.9 5.0
cpv:cgd2_3850 possible FH2 formin homology domain 28.5 5.6
mmu:99100 Cep152, AI851464, mKIAA0912; centrosomal protein 152 28.1
> tgo:TGME49_050810 ribosomal protein L35, putative ; K02918 large
subunit ribosomal protein L35e
Length=178
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/132 (68%), Positives = 108/132 (81%), Gaps = 2/132 (1%)
Query 6 GSSPHI--KMVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVR 63
+SP + KMV I A+ELR K+ K+L KQLEDLKKEL+ LRVAKVTG+ +KL+K+T+VR
Sbjct 47 ATSPLLCSKMVKIRAYELRGKSQKELVKQLEDLKKELAQLRVAKVTGSAASKLSKVTEVR 106
Query 64 KGIARVLTVYNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRV 123
KGIARVLTVY QK+REEA+ FKG K P DLR KKTRAIR+RLT SQ RKMTVR+ KR
Sbjct 107 KGIARVLTVYTQKQREEARAAFKGKKFIPNDLRAKKTRAIRRRLTASQTRKMTVRKMKRT 166
Query 124 QNVPRRKYALLA 135
QNVP+RK+AL+A
Sbjct 167 QNVPKRKFALIA 178
> mmu:66489 Rpl35, 2410039E09Rik; ribosomal protein L35; K02918
large subunit ribosomal protein L35e
Length=123
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 0/123 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+KI VRK IARVLTV
Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
NQ ++E +KF+KG K+KP DLR KKTRA+R+RLT + + T ++ ++ + P RKYA
Sbjct 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYA 120
Query 133 LLA 135
+ A
Sbjct 121 VKA 123
> mmu:100038991 Gm2000; predicted gene 2000; K02918 large subunit
ribosomal protein L35e
Length=123
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 0/123 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+KI VRK IARVLTV
Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
NQ ++E +KF+KG K+KP DLR KKTRA+R+RLT + + T ++ ++ + P RKYA
Sbjct 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYA 120
Query 133 LLA 135
+ A
Sbjct 121 VKA 123
> ath:AT3G09500 60S ribosomal protein L35 (RPL35A); K02918 large
subunit ribosomal protein L35e
Length=123
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 0/121 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I HELR+K+ DLQ QL++LK EL+LLRVAKVTG P KL+KI VRK IA+VLTV
Sbjct 1 MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
+QK++ ++ +K K P DLR KKTRAIR+RLT Q T R K+ P RKYA
Sbjct 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120
Query 133 L 133
+
Sbjct 121 I 121
> hsa:11224 RPL35; ribosomal protein L35; K02918 large subunit
ribosomal protein L35e
Length=123
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 86/123 (69%), Gaps = 0/123 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+KI VRK IARVLTV
Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
NQ ++E +KF+KG K+KP DLR KKTRA+R+RL + T ++ ++ + P RKYA
Sbjct 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query 133 LLA 135
+ A
Sbjct 121 VKA 123
> dre:192299 rpl35, CHUNP6863; ribosomal protein L35; K02918 large
subunit ribosomal protein L35e
Length=123
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 89/125 (71%), Gaps = 4/125 (3%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+KI VRK IARVLTV
Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMT--VRRTKRVQNVPRRK 130
NQ ++E +KF+KG K+KP DLR KKTRAIR++LT + MT ++R R+ ++ RK
Sbjct 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAIRRQLTKHEENLMTKKMQRKSRLYSI--RK 118
Query 131 YALLA 135
+A+ A
Sbjct 119 FAVKA 123
> ath:AT5G02610 60S ribosomal protein L35 (RPL35D); K02918 large
subunit ribosomal protein L35e
Length=123
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 80/121 (66%), Gaps = 0/121 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I HELR K+ DLQ QL++ K EL+LLRVAKVTG P KL+KI VRK IA+VLTV
Sbjct 1 MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
+QK++ ++ +K K P DLR KKTRAIR+RLT Q T R K+ P RKYA
Sbjct 61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYA 120
Query 133 L 133
+
Sbjct 121 I 121
> mmu:100040823 Gm10269; ribosomal protein L35 pseudogene
Length=123
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 86/123 (69%), Gaps = 0/123 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+K VRK IARVLTV
Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKKRVVRKSIARVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
N ++E +KF+KG K+KP DLR KKTRA+R+RLT + + T ++ ++ + P RKYA
Sbjct 61 INHTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQHRKERLYPLRKYA 120
Query 133 LLA 135
+ A
Sbjct 121 VKA 123
> ath:AT2G39390 60S ribosomal protein L35 (RPL35B); K02918 large
subunit ribosomal protein L35e
Length=123
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 0/121 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I HELR+K+ DL QL++ K EL+LLRVAKVTG P KL+KI VRK IA+VLTV
Sbjct 1 MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
+QK++ ++ +K K P DLR KKTRAIR+RLT Q T R K+ P RKYA
Sbjct 61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120
Query 133 L 133
+
Sbjct 121 I 121
> xla:734664 rpl35, MGC116425; ribosomal protein L35; K02918 large
subunit ribosomal protein L35e
Length=123
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 72/96 (75%), Gaps = 0/96 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+KI VRK IARVLTV
Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLT 108
NQ ++E +KF+KG K+KP DLR KKTRA+R+RL
Sbjct 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLN 96
> bbo:BBOV_IV008090 23.m06046; ribosomal protein L35; K02918 large
subunit ribosomal protein L35e
Length=123
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 83/123 (67%), Gaps = 0/123 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I +ELR K +L KQLEDLK+E + +RV KVT + +KL++I +RK IA+VLTV
Sbjct 1 MEKIKVYELRNKTDAELLKQLEDLKQEYASMRVQKVTVTSTSKLSQIGVIRKAIAKVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
YNQ++REEA+K + P ++R K TRA R+ LT Q T+++ K+ +N P+RKYA
Sbjct 61 YNQRKREEARKQYTKISEMPLNMRPKLTRAKRRALTPKQLHLKTIKQRKKCENFPKRKYA 120
Query 133 LLA 135
LL
Sbjct 121 LLV 123
> ath:AT3G55170 60S ribosomal protein L35 (RPL35C); K02918 large
subunit ribosomal protein L35e
Length=123
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 79/121 (65%), Gaps = 0/121 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I HELR K+ DL QL++LK EL+ LRVAKVTG P KL+KI VRK IA+VLTV
Sbjct 1 MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
+QK++ ++ +K K P DLR KKTRAIR+RLT Q T R K+ P RKYA
Sbjct 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120
Query 133 L 133
+
Sbjct 121 I 121
> sce:YDL136W RPL35B, SOS2; L35B; K02918 large subunit ribosomal
protein L35e
Length=120
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M G+ A+ELR K+ + L QL DLKKEL+ L+V K++ + L KI VRK IA VLTV
Sbjct 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPS---LPKIKTVRKSIACVLTV 57
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
N+++RE ++ +KG K++PKDLR KKTRA+R+ LT + ++T ++ K+ P+RKYA
Sbjct 58 INEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYA 117
Query 133 LLA 135
+ A
Sbjct 118 IKA 120
> sce:YDL191W RPL35A, SOS1; L35A; K02918 large subunit ribosomal
protein L35e
Length=120
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M G+ A+ELR K+ + L QL DLKKEL+ L+V K++ + L KI VRK IA VLTV
Sbjct 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPS---LPKIKTVRKSIACVLTV 57
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
N+++RE ++ +KG K++PKDLR KKTRA+R+ LT + ++T ++ K+ P+RKYA
Sbjct 58 INEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYA 117
Query 133 LLA 135
+ A
Sbjct 118 IKA 120
> cel:ZK652.4 rpl-35; Ribosomal Protein, Large subunit family
member (rpl-35); K02918 large subunit ribosomal protein L35e
Length=123
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 0/123 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M + LR + LQK+L++ K EL+ LRV+KVTG +KL+KI VRK IAR+LTV
Sbjct 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
NQ +++E +KF+ K+KP DLRLKKTRAIR+RLT + + ++ + +N RK+A
Sbjct 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFA 120
Query 133 LLA 135
+ A
Sbjct 121 VKA 123
> tpv:TP01_0964 60S ribosomal protein L35; K02918 large subunit
ribosomal protein L35e
Length=123
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 85/122 (69%), Gaps = 0/122 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M + ELR+K+ +L K L+DLK+EL+ RV+KVT +KL+KIT VRK +A+VLTV
Sbjct 1 MEKLRVFELREKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTV 60
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
YNQ+++EEA+K +K P +LR K TRA R+ LT Q T++ KR +N+P+RKYA
Sbjct 61 YNQRKKEEARKKYKKLSKTPLNLRPKLTRAKRKALTTKQLTMKTIKERKRAENLPKRKYA 120
Query 133 LL 134
LL
Sbjct 121 LL 122
> cpv:cgd3_830 60S ribosomal protein L35 ; K02918 large subunit
ribosomal protein L35e
Length=126
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 81/121 (66%), Gaps = 0/121 (0%)
Query 15 GITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTVYN 74
G+ +L + ++L ++++LKKEL+ LRV + TG P KL++I VRKGIAR+LT+ +
Sbjct 6 GLQIKQLISLSEEELTVKIDELKKELASLRVIQSTGTAPNKLSRINVVRKGIARILTILS 65
Query 75 QKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYALL 134
Q+ + ++ G K P DLR K TRA R+ LT Q +KMTV+ +K+ N P+RK+A++
Sbjct 66 QRNIKSLREKHAGSKFMPLDLRKKLTRAKRRALTPQQAKKMTVKASKKALNFPKRKFAII 125
Query 135 A 135
A
Sbjct 126 A 126
> pfa:PF11_0260 60S ribosomal protein L35, putative; K02918 large
subunit ribosomal protein L35e
Length=124
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M + A+ELR K+L +L++LKKELS LR++K G + AK +KI VRK +ARVLTV
Sbjct 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNS-AKNSKIHGVRKNVARVLTV 59
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
YNQKR+ E ++ +K K KP +LR K T+ R +L+ Q+ MT+R+ K+VQN P+RKY
Sbjct 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYL 119
Query 133 LL 134
++
Sbjct 120 VV 121
> mmu:383538 Gm5258, EG383538; predicted gene 5258
Length=160
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 69/123 (56%), Gaps = 14/123 (11%)
Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72
M I A + R K ++L L++LK ELS L VA TG T +KL++I R I LTV
Sbjct 1 MAKIKARDPRGKKKEEL---LDNLKVELSQLPVANETGGTASKLSEI---RVTIVPALTV 54
Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132
NQ ++E KF+KG K++P KKT A+ ++LT + K R+ + P RKYA
Sbjct 55 LNQTQKENLGKFYKGKKYRP-----KKTGAMCRQLTKHEETKQQQRKERL---YPLRKYA 106
Query 133 LLA 135
+ A
Sbjct 107 VKA 109
> ath:AT5G65220 ribosomal protein L29 family protein
Length=173
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query 20 ELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTVYNQKRRE 79
E+R K + LQ+++ DLK EL +LR+ K + K + +++K +AR+LTV KR
Sbjct 69 EIRSKTTEQLQEEVVDLKGELFMLRLQK-SARNEFKSSDFRRMKKQVARMLTV---KRER 124
Query 80 EAKKFFK 86
E K+ K
Sbjct 125 EIKEGIK 131
> ath:AT3G06000 leucine-rich repeat family protein
Length=211
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query 1 ISACLGSSPHIKMVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKIT 60
I+ CL + H+K + ++ ++L+ + ++ K +ED + E + + +LA++
Sbjct 86 IAVCLAAKRHLKKLNLSENDLKDEGCVEIVKSMEDWELEYVDMSYNDLRREGALRLARVV 145
Query 61 QVRKGIARVLTVYNQ----KRREEAKKFFKGC 88
V+KG ++L + K EE K F C
Sbjct 146 -VKKGSFKMLNIDGNMISLKGIEEIKVIFTNC 176
> sce:YGR245C SDA1; Highly conserved nuclear protein required
for actin cytoskeleton organization and passage through Start,
plays a critical role in G1 events, binds Nap1p, also involved
in 60S ribosome biogenesis; K14856 protein SDA1
Length=767
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query 35 DLKKELSLLRVAKVTGATPAKLAKITQVR--KGIARVLTVYNQKRREE 80
D+ E + +A TPA AK+ ++R + +A+++ ++ Q +REE
Sbjct 626 DIDPEAAFREIASTRILTPADFAKLQELRNEESVAKIMGIHKQDKREE 673
> ath:AT5G62650 hypothetical protein
Length=529
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 0/32 (0%)
Query 9 PHIKMVGITAHELRQKAPKDLQKQLEDLKKEL 40
P I MVGI+ E Q + +L+K +EDL ++L
Sbjct 446 PKITMVGISTGEAAQMSKANLKKTMEDLTEDL 477
> hsa:83706 FERMT3, KIND3, MGC10966, MIG-2, MIG2B, UNC112C, URP2,
URP2SF; fermitin family member 3
Length=663
Score = 29.6 bits (65), Expect = 2.9, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query 80 EAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQ 111
+A+ FF G +H+P LRL RA+R R + SQ
Sbjct 88 DARLFF-GPQHRPVILRLPNRRALRLRASFSQ 118
> dre:436806 rab11fip4a, rab11fip4, zgc:92911; RAB11 family interacting
protein 4 (class II) a; K12485 Rab11 family-interacting
protein 3/4
Length=621
Score = 29.6 bits (65), Expect = 3.0, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query 19 HELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTVYNQKRR 78
HE QK + +Q+ +EDL++EL L++ K+ P R A L+ YN K R
Sbjct 472 HEF-QKEREAMQELIEDLRRELEHLQLFKLETEKPG--------RGRTAAGLSEYNAKTR 522
Query 79 E-EAKKFFKGCKHKPKDLRLKKTRAIRQRLTLS 110
E E + K K + LR + Q L+LS
Sbjct 523 EIELEHEVKRLKQENHKLRDQNDDLNGQILSLS 555
> dre:566084 hypothetical LOC566084
Length=921
Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query 27 KDLQKQLEDLKKELSLLRV-------AKVTGATPAKLAKITQVRKGIARVLTVYNQKRRE 79
K++Q ++++L +E+S L+V K G+T KLA + + + ++N
Sbjct 289 KEIQTKVDELDEEVSTLKVRMDQLEKEKQDGSTKKKLADQQAAKVALQHLSGIFNCAPIS 348
Query 80 EAKKFFKG 87
E +K FKG
Sbjct 349 ETEKNFKG 356
> eco:b1939 fliG, ECK1937, flaAII.2, flaBII, JW1923; flagellar
motor switching and energizing component; K02410 flagellar
motor switch protein FliG
Length=331
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 0/25 (0%)
Query 42 LLRVAKVTGATPAKLAKITQVRKGI 66
+LR+A G PA LA++T+V G+
Sbjct 158 MLRIATFGGVQPAALAELTEVLNGL 182
> xla:398304 ncor1; nuclear receptor corepressor 1; K04650 nuclear
receptor co-repressor 1
Length=2498
Score = 29.3 bits (64), Expect = 3.8, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query 53 PAKLAKITQVRKGIARVLTVYNQKRREEAKKFFKGCKHK--------PKDLR-----LKK 99
P + Q + + +++ N+K+ EEA KF +G K P D + +K
Sbjct 214 PVSPPPVEQKHRSVVQIIYDENRKKAEEAHKFLEGLGPKVELPLYNQPSDTKVYHENIKT 273
Query 100 TRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYALL 134
+ +R++L L +R+ R+ R QN+ +R L+
Sbjct 274 NQVMRKKLILFFKRRNHARKL-REQNICQRYDQLM 307
> ath:AT3G57300 INO80; INO80 (INO80 ORTHOLOG); ATP binding / DNA
binding / helicase/ nucleic acid binding; K11665 DNA helicase
INO80 [EC:3.6.4.12]
Length=1507
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query 57 AKITQVRKGIA---RVLTVYNQKRREEAKKFFKGCKHKPKDLRLKKTRAIR 104
A I VR+ IA R+ T +++K +AK+F GC+ +++R+K R+ +
Sbjct 350 AWINIVRRDIAKHHRIFTTFHRKLSIDAKRFADGCQ---REVRMKVGRSYK 397
> mmu:20185 Ncor1, 5730405M06Rik, A230020K14Rik, N-CoR, RIP13,
Rxrip13, mKIAA1047; nuclear receptor co-repressor 1; K04650
nuclear receptor co-repressor 1
Length=2443
Score = 28.9 bits (63), Expect = 5.0, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 33/111 (29%)
Query 53 PAKLAKITQVRKGIARVLTVYNQKRREEAKKFFKGCKHK--------PKDLR-----LKK 99
P + Q + I +++ N+K+ EEA K F+G K P D + +K
Sbjct 223 PVSPPPVEQKHRSIVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKT 282
Query 100 TRAIRQRLTLSQRRKMTVRRTK--------------------RVQNVPRRK 130
+ +R++L L +R+ R+ + R++N PRRK
Sbjct 283 NQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRK 333
> cpv:cgd2_3850 possible FH2 formin homology domain
Length=1189
Score = 28.5 bits (62), Expect = 5.6, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 0/38 (0%)
Query 3 ACLGSSPHIKMVGITAHELRQKAPKDLQKQLEDLKKEL 40
AC+ S +M+ IT + ++K PK+ QK L+ KK +
Sbjct 393 ACIFGSKTSRMLQITINYFKKKLPKNQQKNLDFFKKSI 430
> mmu:99100 Cep152, AI851464, mKIAA0912; centrosomal protein 152
Length=1736
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 0/37 (0%)
Query 18 AHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPA 54
AH L + K LQ++L +LK E+SL A G P
Sbjct 449 AHVLSESMNKALQEELTELKDEISLYESAAELGVLPG 485
Lambda K H
0.321 0.132 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2296762580
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40