bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_2474_orf3 Length=135 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_050810 ribosomal protein L35, putative ; K02918 lar... 166 2e-41 mmu:66489 Rpl35, 2410039E09Rik; ribosomal protein L35; K02918 ... 112 4e-25 mmu:100038991 Gm2000; predicted gene 2000; K02918 large subuni... 112 4e-25 ath:AT3G09500 60S ribosomal protein L35 (RPL35A); K02918 large... 110 2e-24 hsa:11224 RPL35; ribosomal protein L35; K02918 large subunit r... 109 2e-24 dre:192299 rpl35, CHUNP6863; ribosomal protein L35; K02918 lar... 109 3e-24 ath:AT5G02610 60S ribosomal protein L35 (RPL35D); K02918 large... 107 9e-24 mmu:100040823 Gm10269; ribosomal protein L35 pseudogene 106 2e-23 ath:AT2G39390 60S ribosomal protein L35 (RPL35B); K02918 large... 105 3e-23 xla:734664 rpl35, MGC116425; ribosomal protein L35; K02918 lar... 105 4e-23 bbo:BBOV_IV008090 23.m06046; ribosomal protein L35; K02918 lar... 103 1e-22 ath:AT3G55170 60S ribosomal protein L35 (RPL35C); K02918 large... 103 1e-22 sce:YDL136W RPL35B, SOS2; L35B; K02918 large subunit ribosomal... 96.3 3e-20 sce:YDL191W RPL35A, SOS1; L35A; K02918 large subunit ribosomal... 96.3 3e-20 cel:ZK652.4 rpl-35; Ribosomal Protein, Large subunit family me... 95.9 3e-20 tpv:TP01_0964 60S ribosomal protein L35; K02918 large subunit ... 95.5 4e-20 cpv:cgd3_830 60S ribosomal protein L35 ; K02918 large subunit ... 93.2 2e-19 pfa:PF11_0260 60S ribosomal protein L35, putative; K02918 larg... 82.8 3e-16 mmu:383538 Gm5258, EG383538; predicted gene 5258 57.4 ath:AT5G65220 ribosomal protein L29 family protein 33.1 0.26 ath:AT3G06000 leucine-rich repeat family protein 31.2 0.86 sce:YGR245C SDA1; Highly conserved nuclear protein required fo... 30.8 1.2 ath:AT5G62650 hypothetical protein 30.8 1.3 hsa:83706 FERMT3, KIND3, MGC10966, MIG-2, MIG2B, UNC112C, URP2... 29.6 2.9 dre:436806 rab11fip4a, rab11fip4, zgc:92911; RAB11 family inte... 29.6 3.0 dre:566084 hypothetical LOC566084 29.3 3.4 eco:b1939 fliG, ECK1937, flaAII.2, flaBII, JW1923; flagellar m... 29.3 3.7 xla:398304 ncor1; nuclear receptor corepressor 1; K04650 nucle... 29.3 3.8 ath:AT3G57300 INO80; INO80 (INO80 ORTHOLOG); ATP binding / DNA... 28.9 4.3 mmu:20185 Ncor1, 5730405M06Rik, A230020K14Rik, N-CoR, RIP13, R... 28.9 5.0 cpv:cgd2_3850 possible FH2 formin homology domain 28.5 5.6 mmu:99100 Cep152, AI851464, mKIAA0912; centrosomal protein 152 28.1 > tgo:TGME49_050810 ribosomal protein L35, putative ; K02918 large subunit ribosomal protein L35e Length=178 Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 90/132 (68%), Positives = 108/132 (81%), Gaps = 2/132 (1%) Query 6 GSSPHI--KMVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVR 63 +SP + KMV I A+ELR K+ K+L KQLEDLKKEL+ LRVAKVTG+ +KL+K+T+VR Sbjct 47 ATSPLLCSKMVKIRAYELRGKSQKELVKQLEDLKKELAQLRVAKVTGSAASKLSKVTEVR 106 Query 64 KGIARVLTVYNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRV 123 KGIARVLTVY QK+REEA+ FKG K P DLR KKTRAIR+RLT SQ RKMTVR+ KR Sbjct 107 KGIARVLTVYTQKQREEARAAFKGKKFIPNDLRAKKTRAIRRRLTASQTRKMTVRKMKRT 166 Query 124 QNVPRRKYALLA 135 QNVP+RK+AL+A Sbjct 167 QNVPKRKFALIA 178 > mmu:66489 Rpl35, 2410039E09Rik; ribosomal protein L35; K02918 large subunit ribosomal protein L35e Length=123 Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 0/123 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+KI VRK IARVLTV Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 NQ ++E +KF+KG K+KP DLR KKTRA+R+RLT + + T ++ ++ + P RKYA Sbjct 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYA 120 Query 133 LLA 135 + A Sbjct 121 VKA 123 > mmu:100038991 Gm2000; predicted gene 2000; K02918 large subunit ribosomal protein L35e Length=123 Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 0/123 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+KI VRK IARVLTV Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 NQ ++E +KF+KG K+KP DLR KKTRA+R+RLT + + T ++ ++ + P RKYA Sbjct 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYA 120 Query 133 LLA 135 + A Sbjct 121 VKA 123 > ath:AT3G09500 60S ribosomal protein L35 (RPL35A); K02918 large subunit ribosomal protein L35e Length=123 Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 0/121 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I HELR+K+ DLQ QL++LK EL+LLRVAKVTG P KL+KI VRK IA+VLTV Sbjct 1 MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 +QK++ ++ +K K P DLR KKTRAIR+RLT Q T R K+ P RKYA Sbjct 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120 Query 133 L 133 + Sbjct 121 I 121 > hsa:11224 RPL35; ribosomal protein L35; K02918 large subunit ribosomal protein L35e Length=123 Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/123 (53%), Positives = 86/123 (69%), Gaps = 0/123 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+KI VRK IARVLTV Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 NQ ++E +KF+KG K+KP DLR KKTRA+R+RL + T ++ ++ + P RKYA Sbjct 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120 Query 133 LLA 135 + A Sbjct 121 VKA 123 > dre:192299 rpl35, CHUNP6863; ribosomal protein L35; K02918 large subunit ribosomal protein L35e Length=123 Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/125 (54%), Positives = 89/125 (71%), Gaps = 4/125 (3%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+KI VRK IARVLTV Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMT--VRRTKRVQNVPRRK 130 NQ ++E +KF+KG K+KP DLR KKTRAIR++LT + MT ++R R+ ++ RK Sbjct 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAIRRQLTKHEENLMTKKMQRKSRLYSI--RK 118 Query 131 YALLA 135 +A+ A Sbjct 119 FAVKA 123 > ath:AT5G02610 60S ribosomal protein L35 (RPL35D); K02918 large subunit ribosomal protein L35e Length=123 Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 65/121 (53%), Positives = 80/121 (66%), Gaps = 0/121 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I HELR K+ DLQ QL++ K EL+LLRVAKVTG P KL+KI VRK IA+VLTV Sbjct 1 MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 +QK++ ++ +K K P DLR KKTRAIR+RLT Q T R K+ P RKYA Sbjct 61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYA 120 Query 133 L 133 + Sbjct 121 I 121 > mmu:100040823 Gm10269; ribosomal protein L35 pseudogene Length=123 Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/123 (52%), Positives = 86/123 (69%), Gaps = 0/123 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+K VRK IARVLTV Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKKRVVRKSIARVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 N ++E +KF+KG K+KP DLR KKTRA+R+RLT + + T ++ ++ + P RKYA Sbjct 61 INHTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQHRKERLYPLRKYA 120 Query 133 LLA 135 + A Sbjct 121 VKA 123 > ath:AT2G39390 60S ribosomal protein L35 (RPL35B); K02918 large subunit ribosomal protein L35e Length=123 Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 0/121 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I HELR+K+ DL QL++ K EL+LLRVAKVTG P KL+KI VRK IA+VLTV Sbjct 1 MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 +QK++ ++ +K K P DLR KKTRAIR+RLT Q T R K+ P RKYA Sbjct 61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120 Query 133 L 133 + Sbjct 121 I 121 > xla:734664 rpl35, MGC116425; ribosomal protein L35; K02918 large subunit ribosomal protein L35e Length=123 Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/96 (61%), Positives = 72/96 (75%), Gaps = 0/96 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I A +LR K ++L KQL+DLK ELS LRVAKVTG +KL+KI VRK IARVLTV Sbjct 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLT 108 NQ ++E +KF+KG K+KP DLR KKTRA+R+RL Sbjct 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLN 96 > bbo:BBOV_IV008090 23.m06046; ribosomal protein L35; K02918 large subunit ribosomal protein L35e Length=123 Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/123 (47%), Positives = 83/123 (67%), Gaps = 0/123 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I +ELR K +L KQLEDLK+E + +RV KVT + +KL++I +RK IA+VLTV Sbjct 1 MEKIKVYELRNKTDAELLKQLEDLKQEYASMRVQKVTVTSTSKLSQIGVIRKAIAKVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 YNQ++REEA+K + P ++R K TRA R+ LT Q T+++ K+ +N P+RKYA Sbjct 61 YNQRKREEARKQYTKISEMPLNMRPKLTRAKRRALTPKQLHLKTIKQRKKCENFPKRKYA 120 Query 133 LLA 135 LL Sbjct 121 LLV 123 > ath:AT3G55170 60S ribosomal protein L35 (RPL35C); K02918 large subunit ribosomal protein L35e Length=123 Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/121 (52%), Positives = 79/121 (65%), Gaps = 0/121 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I HELR K+ DL QL++LK EL+ LRVAKVTG P KL+KI VRK IA+VLTV Sbjct 1 MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 +QK++ ++ +K K P DLR KKTRAIR+RLT Q T R K+ P RKYA Sbjct 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120 Query 133 L 133 + Sbjct 121 I 121 > sce:YDL136W RPL35B, SOS2; L35B; K02918 large subunit ribosomal protein L35e Length=120 Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/123 (47%), Positives = 85/123 (69%), Gaps = 3/123 (2%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M G+ A+ELR K+ + L QL DLKKEL+ L+V K++ + L KI VRK IA VLTV Sbjct 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPS---LPKIKTVRKSIACVLTV 57 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 N+++RE ++ +KG K++PKDLR KKTRA+R+ LT + ++T ++ K+ P+RKYA Sbjct 58 INEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYA 117 Query 133 LLA 135 + A Sbjct 118 IKA 120 > sce:YDL191W RPL35A, SOS1; L35A; K02918 large subunit ribosomal protein L35e Length=120 Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/123 (47%), Positives = 85/123 (69%), Gaps = 3/123 (2%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M G+ A+ELR K+ + L QL DLKKEL+ L+V K++ + L KI VRK IA VLTV Sbjct 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPS---LPKIKTVRKSIACVLTV 57 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 N+++RE ++ +KG K++PKDLR KKTRA+R+ LT + ++T ++ K+ P+RKYA Sbjct 58 INEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYA 117 Query 133 LLA 135 + A Sbjct 118 IKA 120 > cel:ZK652.4 rpl-35; Ribosomal Protein, Large subunit family member (rpl-35); K02918 large subunit ribosomal protein L35e Length=123 Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 0/123 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M + LR + LQK+L++ K EL+ LRV+KVTG +KL+KI VRK IAR+LTV Sbjct 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 NQ +++E +KF+ K+KP DLRLKKTRAIR+RLT + + ++ + +N RK+A Sbjct 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFA 120 Query 133 LLA 135 + A Sbjct 121 VKA 123 > tpv:TP01_0964 60S ribosomal protein L35; K02918 large subunit ribosomal protein L35e Length=123 Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/122 (50%), Positives = 85/122 (69%), Gaps = 0/122 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M + ELR+K+ +L K L+DLK+EL+ RV+KVT +KL+KIT VRK +A+VLTV Sbjct 1 MEKLRVFELREKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTV 60 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 YNQ+++EEA+K +K P +LR K TRA R+ LT Q T++ KR +N+P+RKYA Sbjct 61 YNQRKKEEARKKYKKLSKTPLNLRPKLTRAKRKALTTKQLTMKTIKERKRAENLPKRKYA 120 Query 133 LL 134 LL Sbjct 121 LL 122 > cpv:cgd3_830 60S ribosomal protein L35 ; K02918 large subunit ribosomal protein L35e Length=126 Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/121 (42%), Positives = 81/121 (66%), Gaps = 0/121 (0%) Query 15 GITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTVYN 74 G+ +L + ++L ++++LKKEL+ LRV + TG P KL++I VRKGIAR+LT+ + Sbjct 6 GLQIKQLISLSEEELTVKIDELKKELASLRVIQSTGTAPNKLSRINVVRKGIARILTILS 65 Query 75 QKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYALL 134 Q+ + ++ G K P DLR K TRA R+ LT Q +KMTV+ +K+ N P+RK+A++ Sbjct 66 QRNIKSLREKHAGSKFMPLDLRKKLTRAKRRALTPQQAKKMTVKASKKALNFPKRKFAII 125 Query 135 A 135 A Sbjct 126 A 126 > pfa:PF11_0260 60S ribosomal protein L35, putative; K02918 large subunit ribosomal protein L35e Length=124 Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/122 (48%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M + A+ELR K+L +L++LKKELS LR++K G + AK +KI VRK +ARVLTV Sbjct 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNS-AKNSKIHGVRKNVARVLTV 59 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 YNQKR+ E ++ +K K KP +LR K T+ R +L+ Q+ MT+R+ K+VQN P+RKY Sbjct 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYL 119 Query 133 LL 134 ++ Sbjct 120 VV 121 > mmu:383538 Gm5258, EG383538; predicted gene 5258 Length=160 Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/123 (39%), Positives = 69/123 (56%), Gaps = 14/123 (11%) Query 13 MVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTV 72 M I A + R K ++L L++LK ELS L VA TG T +KL++I R I LTV Sbjct 1 MAKIKARDPRGKKKEEL---LDNLKVELSQLPVANETGGTASKLSEI---RVTIVPALTV 54 Query 73 YNQKRREEAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYA 132 NQ ++E KF+KG K++P KKT A+ ++LT + K R+ + P RKYA Sbjct 55 LNQTQKENLGKFYKGKKYRP-----KKTGAMCRQLTKHEETKQQQRKERL---YPLRKYA 106 Query 133 LLA 135 + A Sbjct 107 VKA 109 > ath:AT5G65220 ribosomal protein L29 family protein Length=173 Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 4/67 (5%) Query 20 ELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTVYNQKRRE 79 E+R K + LQ+++ DLK EL +LR+ K + K + +++K +AR+LTV KR Sbjct 69 EIRSKTTEQLQEEVVDLKGELFMLRLQK-SARNEFKSSDFRRMKKQVARMLTV---KRER 124 Query 80 EAKKFFK 86 E K+ K Sbjct 125 EIKEGIK 131 > ath:AT3G06000 leucine-rich repeat family protein Length=211 Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust. Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 5/92 (5%) Query 1 ISACLGSSPHIKMVGITAHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKIT 60 I+ CL + H+K + ++ ++L+ + ++ K +ED + E + + +LA++ Sbjct 86 IAVCLAAKRHLKKLNLSENDLKDEGCVEIVKSMEDWELEYVDMSYNDLRREGALRLARVV 145 Query 61 QVRKGIARVLTVYNQ----KRREEAKKFFKGC 88 V+KG ++L + K EE K F C Sbjct 146 -VKKGSFKMLNIDGNMISLKGIEEIKVIFTNC 176 > sce:YGR245C SDA1; Highly conserved nuclear protein required for actin cytoskeleton organization and passage through Start, plays a critical role in G1 events, binds Nap1p, also involved in 60S ribosome biogenesis; K14856 protein SDA1 Length=767 Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust. Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query 35 DLKKELSLLRVAKVTGATPAKLAKITQVR--KGIARVLTVYNQKRREE 80 D+ E + +A TPA AK+ ++R + +A+++ ++ Q +REE Sbjct 626 DIDPEAAFREIASTRILTPADFAKLQELRNEESVAKIMGIHKQDKREE 673 > ath:AT5G62650 hypothetical protein Length=529 Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 0/32 (0%) Query 9 PHIKMVGITAHELRQKAPKDLQKQLEDLKKEL 40 P I MVGI+ E Q + +L+K +EDL ++L Sbjct 446 PKITMVGISTGEAAQMSKANLKKTMEDLTEDL 477 > hsa:83706 FERMT3, KIND3, MGC10966, MIG-2, MIG2B, UNC112C, URP2, URP2SF; fermitin family member 3 Length=663 Score = 29.6 bits (65), Expect = 2.9, Method: Composition-based stats. Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Query 80 EAKKFFKGCKHKPKDLRLKKTRAIRQRLTLSQ 111 +A+ FF G +H+P LRL RA+R R + SQ Sbjct 88 DARLFF-GPQHRPVILRLPNRRALRLRASFSQ 118 > dre:436806 rab11fip4a, rab11fip4, zgc:92911; RAB11 family interacting protein 4 (class II) a; K12485 Rab11 family-interacting protein 3/4 Length=621 Score = 29.6 bits (65), Expect = 3.0, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 10/93 (10%) Query 19 HELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPAKLAKITQVRKGIARVLTVYNQKRR 78 HE QK + +Q+ +EDL++EL L++ K+ P R A L+ YN K R Sbjct 472 HEF-QKEREAMQELIEDLRRELEHLQLFKLETEKPG--------RGRTAAGLSEYNAKTR 522 Query 79 E-EAKKFFKGCKHKPKDLRLKKTRAIRQRLTLS 110 E E + K K + LR + Q L+LS Sbjct 523 EIELEHEVKRLKQENHKLRDQNDDLNGQILSLS 555 > dre:566084 hypothetical LOC566084 Length=921 Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 7/68 (10%) Query 27 KDLQKQLEDLKKELSLLRV-------AKVTGATPAKLAKITQVRKGIARVLTVYNQKRRE 79 K++Q ++++L +E+S L+V K G+T KLA + + + ++N Sbjct 289 KEIQTKVDELDEEVSTLKVRMDQLEKEKQDGSTKKKLADQQAAKVALQHLSGIFNCAPIS 348 Query 80 EAKKFFKG 87 E +K FKG Sbjct 349 ETEKNFKG 356 > eco:b1939 fliG, ECK1937, flaAII.2, flaBII, JW1923; flagellar motor switching and energizing component; K02410 flagellar motor switch protein FliG Length=331 Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust. Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 0/25 (0%) Query 42 LLRVAKVTGATPAKLAKITQVRKGI 66 +LR+A G PA LA++T+V G+ Sbjct 158 MLRIATFGGVQPAALAELTEVLNGL 182 > xla:398304 ncor1; nuclear receptor corepressor 1; K04650 nuclear receptor co-repressor 1 Length=2498 Score = 29.3 bits (64), Expect = 3.8, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 14/95 (14%) Query 53 PAKLAKITQVRKGIARVLTVYNQKRREEAKKFFKGCKHK--------PKDLR-----LKK 99 P + Q + + +++ N+K+ EEA KF +G K P D + +K Sbjct 214 PVSPPPVEQKHRSVVQIIYDENRKKAEEAHKFLEGLGPKVELPLYNQPSDTKVYHENIKT 273 Query 100 TRAIRQRLTLSQRRKMTVRRTKRVQNVPRRKYALL 134 + +R++L L +R+ R+ R QN+ +R L+ Sbjct 274 NQVMRKKLILFFKRRNHARKL-REQNICQRYDQLM 307 > ath:AT3G57300 INO80; INO80 (INO80 ORTHOLOG); ATP binding / DNA binding / helicase/ nucleic acid binding; K11665 DNA helicase INO80 [EC:3.6.4.12] Length=1507 Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 6/51 (11%) Query 57 AKITQVRKGIA---RVLTVYNQKRREEAKKFFKGCKHKPKDLRLKKTRAIR 104 A I VR+ IA R+ T +++K +AK+F GC+ +++R+K R+ + Sbjct 350 AWINIVRRDIAKHHRIFTTFHRKLSIDAKRFADGCQ---REVRMKVGRSYK 397 > mmu:20185 Ncor1, 5730405M06Rik, A230020K14Rik, N-CoR, RIP13, Rxrip13, mKIAA1047; nuclear receptor co-repressor 1; K04650 nuclear receptor co-repressor 1 Length=2443 Score = 28.9 bits (63), Expect = 5.0, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 33/111 (29%) Query 53 PAKLAKITQVRKGIARVLTVYNQKRREEAKKFFKGCKHK--------PKDLR-----LKK 99 P + Q + I +++ N+K+ EEA K F+G K P D + +K Sbjct 223 PVSPPPVEQKHRSIVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKT 282 Query 100 TRAIRQRLTLSQRRKMTVRRTK--------------------RVQNVPRRK 130 + +R++L L +R+ R+ + R++N PRRK Sbjct 283 NQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRK 333 > cpv:cgd2_3850 possible FH2 formin homology domain Length=1189 Score = 28.5 bits (62), Expect = 5.6, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 0/38 (0%) Query 3 ACLGSSPHIKMVGITAHELRQKAPKDLQKQLEDLKKEL 40 AC+ S +M+ IT + ++K PK+ QK L+ KK + Sbjct 393 ACIFGSKTSRMLQITINYFKKKLPKNQQKNLDFFKKSI 430 > mmu:99100 Cep152, AI851464, mKIAA0912; centrosomal protein 152 Length=1736 Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 0/37 (0%) Query 18 AHELRQKAPKDLQKQLEDLKKELSLLRVAKVTGATPA 54 AH L + K LQ++L +LK E+SL A G P Sbjct 449 AHVLSESMNKALQEELTELKDEISLYESAAELGVLPG 485 Lambda K H 0.321 0.132 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2296762580 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40