bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_2540_orf1 Length=162 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_015280 iron-sulfur subunit of succinate dehydrogena... 121 1e-27 ath:AT3G27380 SDH2-1; SDH2-1; electron carrier/ succinate dehy... 116 3e-26 ath:AT5G40650 SDH2-2; SDH2-2; electron carrier/ succinate dehy... 115 5e-26 bbo:BBOV_IV005280 23.m06368; succinate dehydrogenase iron-sulf... 110 2e-24 xla:379939 sdhb, Ip, MGC130803, MGC53699; succinate dehydrogen... 107 2e-23 hsa:6390 SDHB, FLJ92337, IP, PGL4, SDH, SDH1, SDH2, SDHIP; suc... 105 5e-23 tpv:TP01_0210 succinate dehydrogenase iron-sulfur subunit; K00... 104 1e-22 sce:YLL041C SDH2, ACN17; Iron-sulfur protein subunit of succin... 104 1e-22 dre:562149 sdhb, Ip, MGC165456, fj46d06, wu:fj46d06; succinate... 103 3e-22 mmu:67680 Sdhb, 0710008N11Rik; succinate dehydrogenase complex... 101 9e-22 pfa:PFL0630w iron-sulfur subunit of succinate dehydrogenase (E... 99.0 6e-21 cel:F42A8.2 sdhb-1; Succinate DeHydrogenase complex subunit B ... 98.6 7e-21 ath:AT5G65165 SDH2-3; SDH2-3; electron carrier/ succinate dehy... 91.3 1e-18 eco:b0724 sdhB, ECK0713, JW0714; succinate dehydrogenase, FeS ... 73.9 2e-13 eco:b4153 frdB, ECK4149, JW4114; fumarate reductase (anaerobic... 55.8 6e-08 tgo:TGME49_064660 SRS domain-containing, N-acetylglucosamine-p... 34.7 0.14 tgo:TGME49_047000 TPR domain-containing protein (EC:3.4.21.72) 31.2 1.7 > tgo:TGME49_015280 iron-sulfur subunit of succinate dehydrogenase, putative (EC:1.3.5.1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=342 Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 52/68 (76%), Positives = 60/68 (88%), Gaps = 0/68 (0%) Query 95 TFRIHRYDPEKGGRPHMQEYTLDTSTCGPMVLDALIAIKDRQDPTLTFRRSCREGICGSC 154 TF I+RY+PE RP+MQ++ LD STCGPM+LDALIAIKDRQDP+L FRRSCREGICGSC Sbjct 44 TFAIYRYNPETDKRPYMQKFELDVSTCGPMILDALIAIKDRQDPSLVFRRSCREGICGSC 103 Query 155 AMNIDGIN 162 AMN+DG N Sbjct 104 AMNVDGKN 111 > ath:AT3G27380 SDH2-1; SDH2-1; electron carrier/ succinate dehydrogenase (EC:1.3.5.1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=279 Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 55/107 (51%), Positives = 74/107 (69%), Gaps = 2/107 (1%) Query 56 PAGVSAACRLLFPRASPVLSGLVSQQRASFSSNAGGTNLTFRIHRYDPEKGGRPHMQEYT 115 P+ ++ A RL+ R + +G ++ +AS G TF+I+R++P+ G+P +Q Y Sbjct 14 PSKLATAARLIPARWTS--TGAEAETKASSGGGRGSNLKTFQIYRWNPDNPGKPELQNYQ 71 Query 116 LDTSTCGPMVLDALIAIKDRQDPTLTFRRSCREGICGSCAMNIDGIN 162 +D CGPMVLDALI IK+ DP+LTFRRSCREGICGSCAMNIDG N Sbjct 72 IDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCN 118 > ath:AT5G40650 SDH2-2; SDH2-2; electron carrier/ succinate dehydrogenase (EC:1.3.5.1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=280 Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/105 (55%), Positives = 77/105 (73%), Gaps = 5/105 (4%) Query 59 VSAACRLLFPRASPVLSGLVSQQRASFSSNAGGTNL-TFRIHRYDPEKGGRPHMQEYTLD 117 +S A RL+ R + +G +Q +AS + GG +L TF+I+R++P+ G+P +Q+Y +D Sbjct 17 LSTAARLIPARWTS--TGSEAQSKAS--TGGGGASLKTFQIYRWNPDNPGKPELQDYKID 72 Query 118 TSTCGPMVLDALIAIKDRQDPTLTFRRSCREGICGSCAMNIDGIN 162 CGPMVLDALI IK+ DP+LTFRRSCREGICGSCAMNIDG N Sbjct 73 LKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCN 117 > bbo:BBOV_IV005280 23.m06368; succinate dehydrogenase iron-sulfur subunit (EC:1.3.5.1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=281 Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 51/87 (58%), Positives = 63/87 (72%), Gaps = 4/87 (4%) Query 76 GLVSQQRASFSSNAGGTNLTFRIHRYDPEKGGRPHMQEYTLDTSTCGPMVLDALIAIKDR 135 GL+ + S+N +TF + RY PE G RP MQ Y +DT+ CGPM+LDALI IK+ Sbjct 7 GLIRRCARRLSANG----VTFSVFRYSPESGKRPRMQSYKVDTAACGPMILDALIKIKNE 62 Query 136 QDPTLTFRRSCREGICGSCAMNIDGIN 162 QD TL+FRRSCREGICGSCAMN++G N Sbjct 63 QDSTLSFRRSCREGICGSCAMNVNGEN 89 > xla:379939 sdhb, Ip, MGC130803, MGC53699; succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (EC:1.3.5.1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=282 Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 49/68 (72%), Positives = 57/68 (83%), Gaps = 1/68 (1%) Query 96 FRIHRYDPEK-GGRPHMQEYTLDTSTCGPMVLDALIAIKDRQDPTLTFRRSCREGICGSC 154 F I+R+DP+K G +P MQ Y +D +TCGPMVLDALI IK+ DPTLTFRRSCREGICGSC Sbjct 44 FAIYRWDPDKPGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVDPTLTFRRSCREGICGSC 103 Query 155 AMNIDGIN 162 AMNI+G N Sbjct 104 AMNINGGN 111 > hsa:6390 SDHB, FLJ92337, IP, PGL4, SDH, SDH1, SDH2, SDHIP; succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (EC:1.3.5.1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=280 Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 48/68 (70%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Query 96 FRIHRYDPEKGG-RPHMQEYTLDTSTCGPMVLDALIAIKDRQDPTLTFRRSCREGICGSC 154 F I+R+DP+K G +PHMQ Y +D + CGPMVLDALI IK+ D TLTFRRSCREGICGSC Sbjct 42 FAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSC 101 Query 155 AMNIDGIN 162 AMNI+G N Sbjct 102 AMNINGGN 109 > tpv:TP01_0210 succinate dehydrogenase iron-sulfur subunit; K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=263 Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 0/70 (0%) Query 93 NLTFRIHRYDPEKGGRPHMQEYTLDTSTCGPMVLDALIAIKDRQDPTLTFRRSCREGICG 152 N+ F + RY P +P MQ YT+DT+ CGPM+LDALI IK+ D TLTFRRSCREGICG Sbjct 20 NVNFSVFRYTPNSKEKPRMQTYTVDTNECGPMILDALIKIKNEMDSTLTFRRSCREGICG 79 Query 153 SCAMNIDGIN 162 SCAMNI+G N Sbjct 80 SCAMNINGEN 89 > sce:YLL041C SDH2, ACN17; Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain (EC:1.3.5.1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=266 Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 46/69 (66%), Positives = 56/69 (81%), Gaps = 1/69 (1%) Query 95 TFRIHRYDP-EKGGRPHMQEYTLDTSTCGPMVLDALIAIKDRQDPTLTFRRSCREGICGS 153 TF+++R++P E +PH+Q Y +D + CGPMVLDAL+ IKD QD TLTFRRSCREGICGS Sbjct 35 TFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGICGS 94 Query 154 CAMNIDGIN 162 CAMNI G N Sbjct 95 CAMNIGGRN 103 > dre:562149 sdhb, Ip, MGC165456, fj46d06, wu:fj46d06; succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (EC:1.3.5.1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=280 Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 47/68 (69%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Query 96 FRIHRYDPEK-GGRPHMQEYTLDTSTCGPMVLDALIAIKDRQDPTLTFRRSCREGICGSC 154 F+I+R+DP+ G +P MQ Y +D +TCGPMVLDALI IK+ D TLTFRRSCREGICGSC Sbjct 41 FQIYRWDPDTVGDKPRMQTYEIDLNTCGPMVLDALIKIKNEMDSTLTFRRSCREGICGSC 100 Query 155 AMNIDGIN 162 AMNI+G N Sbjct 101 AMNINGGN 108 > mmu:67680 Sdhb, 0710008N11Rik; succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (EC:1.3.5.1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=282 Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 47/68 (69%), Positives = 55/68 (80%), Gaps = 1/68 (1%) Query 96 FRIHRYDPEK-GGRPHMQEYTLDTSTCGPMVLDALIAIKDRQDPTLTFRRSCREGICGSC 154 F I+R+DP+K G +P MQ Y +D + CGPMVLDALI IK+ D TLTFRRSCREGICGSC Sbjct 44 FAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSC 103 Query 155 AMNIDGIN 162 AMNI+G N Sbjct 104 AMNINGGN 111 > pfa:PFL0630w iron-sulfur subunit of succinate dehydrogenase (EC:1.3.5.1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=321 Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 43/67 (64%), Positives = 49/67 (73%), Gaps = 0/67 (0%) Query 96 FRIHRYDPEKGGRPHMQEYTLDTSTCGPMVLDALIAIKDRQDPTLTFRRSCREGICGSCA 155 F I RY+P RP M+ + +D CGPMVLD LI IKD D TL+FRRSCREGICGSCA Sbjct 70 FSIFRYNPTNKKRPQMETFEVDIDNCGPMVLDVLIKIKDEIDSTLSFRRSCREGICGSCA 129 Query 156 MNIDGIN 162 MNI+G N Sbjct 130 MNINGKN 136 > cel:F42A8.2 sdhb-1; Succinate DeHydrogenase complex subunit B family member (sdhb-1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=298 Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 46/81 (56%), Positives = 58/81 (71%), Gaps = 1/81 (1%) Query 83 ASFSSNAGGTNLTFRIHRYDPEK-GGRPHMQEYTLDTSTCGPMVLDALIAIKDRQDPTLT 141 A+ + G TF I+R++PE G +P +Q++ +D CG M+LDALI IK+ DPTLT Sbjct 43 AAKTKKTGNRIKTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLT 102 Query 142 FRRSCREGICGSCAMNIDGIN 162 FRRSCREGICGSCAMNI G N Sbjct 103 FRRSCREGICGSCAMNIGGQN 123 > ath:AT5G65165 SDH2-3; SDH2-3; electron carrier/ succinate dehydrogenase (EC:1.3.5.1); K00235 succinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1] Length=309 Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 39/68 (57%), Positives = 53/68 (77%), Gaps = 1/68 (1%) Query 96 FRIHRYDPEK-GGRPHMQEYTLDTSTCGPMVLDALIAIKDRQDPTLTFRRSCREGICGSC 154 F+I+R++P+K +P +Q + +D S+CGPMVLD L IK D +L++RRSCREGICGSC Sbjct 69 FKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSC 128 Query 155 AMNIDGIN 162 +MNIDG N Sbjct 129 SMNIDGTN 136 > eco:b0724 sdhB, ECK0713, JW0714; succinate dehydrogenase, FeS subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur protein [EC:1.3.99.1] Length=238 Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/70 (51%), Positives = 51/70 (72%), Gaps = 2/70 (2%) Query 94 LTFRIHRYDPEKGGRPHMQEYTLDTSTC-GPMVLDALIAIKDRQDPTLTFRRSCREGICG 152 L F I+RY+P+ P MQ+YTL+ M+LDALI +K++ DP+L+FRRSCREG+CG Sbjct 3 LEFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKEK-DPSLSFRRSCREGVCG 61 Query 153 SCAMNIDGIN 162 S +N++G N Sbjct 62 SDGLNMNGKN 71 > eco:b4153 frdB, ECK4149, JW4114; fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1); K00245 fumarate reductase iron-sulfur protein [EC:1.3.99.1] Length=244 Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 5/71 (7%) Query 93 NLTFRIHRYDPEKGGRPH--MQEYTLDTSTCGPMVLDALIAIKDRQDPTLTFRRSCREGI 150 NL + RY+PE PH E D +T +LDAL IKD P L++R SCR I Sbjct 6 NLKIEVVRYNPEVDTAPHSAFYEVPYDATTS---LLDALGYIKDNLAPDLSYRWSCRMAI 62 Query 151 CGSCAMNIDGI 161 CGSC M ++ + Sbjct 63 CGSCGMMVNNV 73 > tgo:TGME49_064660 SRS domain-containing, N-acetylglucosamine-phosphate mutase, putative Length=2344 Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Query 14 CFRQMHAGDSGAVCTLSEAQPSEW--PVNSLIFMEMRRLTSSL-SPAGVSAACRLLFPRA 70 CF + GD C + P W PV + +++ LT ++ SP V+ C L FP+ Sbjct 1866 CFACVDRGDITNSCGVLVTVPPFWAPPVQETVCNDVKTLTMTVHSPGSVTLRCGLEFPKV 1925 Query 71 SPVLSGLVSQQRASFSSNAG 90 P + SQ + + + G Sbjct 1926 DPPIDDPASQGQVYYGKSCG 1945 > tgo:TGME49_047000 TPR domain-containing protein (EC:3.4.21.72) Length=888 Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 6/72 (8%) Query 8 DRKVLSCFRQMHAGDSGAVCTLSEAQPSEWPVNSLIFMEMRRLTSSLSPAGVSAACRLLF 67 DR++ CF+ HA + + S + P+ S R SSL P+G + + Sbjct 244 DRRIRGCFKYDHAESRPSSSSTSSSFRVSSPLQS------RSDPSSLLPSGSAHVTKSEC 297 Query 68 PRASPVLSGLVS 79 PRA PVL+ S Sbjct 298 PRAPPVLAAPTS 309 Lambda K H 0.320 0.132 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 3767900632 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40