bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_2567_orf2 Length=132 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_093610 dihydroorotase protein, putative (EC:3.5.2.3... 115 3e-26 bbo:BBOV_III009670 17.m07839; dihydroorotase (EC:3.5.2.3); K01... 91.7 6e-19 pfa:PF14_0697 dihydroorotase, putative; K01465 dihydroorotase ... 82.0 4e-16 ath:AT4G22930 PYR4; PYR4 (PYRIMIDIN 4); dihydroorotase/ hydrol... 81.3 8e-16 sce:YLR420W URA4; Dihydroorotase, catalyzes the third enzymati... 74.3 8e-14 eco:b1062 pyrC, ECK1047, JW1049; dihydro-orotase (EC:3.5.2.3);... 62.0 5e-10 tpv:TP04_0882 dihydroorotase (EC:3.5.2.3); K01465 dihydroorota... 38.5 0.006 mmu:327762 Dna2, Dna2l, E130315B21Rik, KIAA0083; DNA replicati... 30.0 2.1 bbo:BBOV_III006600 17.m07584; hypothetical protein 28.5 6.2 > tgo:TGME49_093610 dihydroorotase protein, putative (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Length=403 Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 0/127 (0%) Query 2 QVVREGHPQFFLGSDSAPHPRHKKDSYPPAAGVFTQPFLLAYLADTFARAGCLDKLQSFA 61 QV+++G FFLGSDSAPHPR K+S PPAAGVFTQP LLAYL FA GC+ KL+ FA Sbjct 270 QVIQDGDTHFFLGSDSAPHPRLAKESSPPAAGVFTQPLLLAYLVSIFAELGCISKLREFA 329 Query 62 CENAAAFFGLPKKELVEGEDCVVLEQTPCRIPNVVCGAEGTSTDVVPFLAGHELGYTLKV 121 +AAAFFG L E +C V++ TP R+P++ + VVPF+A EL YT++V Sbjct 330 DGHAAAFFGFEAATLEENLECAVIQPTPQRVPSIFKFPGQENEGVVPFMASLELPYTVEV 389 Query 122 VPFSRSL 128 FS SL Sbjct 390 RRFSPSL 396 > bbo:BBOV_III009670 17.m07839; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Length=351 Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 50/117 (42%), Positives = 66/117 (56%), Gaps = 14/117 (11%) Query 1 LQVVREGHPQFFLGSDSAPHPRHKKDSYPPAAGVFTQPFLLAYLADTFARAGCLDKLQSF 60 LQ +R P+ FLGSDSAPH K+S P AG+FTQP+++ YLA F R C D L++F Sbjct 235 LQAIRTRSPKIFLGSDSAPHTIAAKNSDKPPAGIFTQPYIMGYLATIFKRLDCEDYLEAF 294 Query 61 ACENAAAFFGLPKK--ELVEGEDCVVLEQTPCRIPNVVCGAEGTSTDVVPFLAGHEL 115 C N A F LP K E +E D ++ +P+ V G + PFLAG E+ Sbjct 295 VCRNGAEFLDLPAKNIEYMEITDETII------VPDTVGGV------LKPFLAGEEI 339 > pfa:PF14_0697 dihydroorotase, putative; K01465 dihydroorotase [EC:3.5.2.3] Length=358 Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 14/124 (11%) Query 2 QVVREGHPQFFLGSDSAPHPR--HKKDSYPPAAGVFTQPFLLAYLADTFARAGCLDKLQS 59 V+++ P+ FLGSDSAPH + +K Y P G++TQPFL+ Y+A + LDK+++ Sbjct 243 DVIKDDFPRVFLGSDSAPHYKVMKRKPYYKP--GIYTQPFLINYVAHILNKFDALDKMEN 300 Query 60 FACENAAAFFGL-PKKELVEGEDCVVLEQTPCRIPNVVCGAEGTSTDVVPFLAGHELGYT 118 F +NA+ F L KK+L + CV E+ P ++P G VVPFLAG L Y Sbjct 301 FTSKNASLFLNLAEKKKLAKYYICV--EKHPFKLPREYNG-------VVPFLAGKTLDYD 351 Query 119 LKVV 122 + V Sbjct 352 IHYV 355 > ath:AT4G22930 PYR4; PYR4 (PYRIMIDIN 4); dihydroorotase/ hydrolase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Length=377 Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 8/117 (6%) Query 1 LQVVREGHPQFFLGSDSAPHPRHKKDSYPPAAGVFTQPFLLAYLADTFARAGCLDKLQSF 60 ++ V G +FFLG+DSAPH R +K+S AG+++ P L+ A F AG LDKL++F Sbjct 265 VKAVTSGSKKFFLGTDSAPHERSRKESSCGCAGIYSAPIALSLYAKVFDEAGALDKLEAF 324 Query 61 ACENAAAFFGLPKKELVEGEDCVVLEQTPCRIPNVVCGAEGTSTDVVPFLAGHELGY 117 N F+GLP+ + L+++P ++P+V G ++VP AG L + Sbjct 325 TSFNGPDFYGLPR-----NSSKITLKKSPWKVPDVFNFPFG---EIVPMFAGETLQW 373 > sce:YLR420W URA4; Dihydroorotase, catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines, converting carbamoyl-L-aspartate into dihydroorotate (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Length=364 Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 4/118 (3%) Query 7 GHPQFFLGSDSAPHPRHKKDSYPPA-AGVFTQPFLLAYLADTFARAGCLDKLQSFACENA 65 G P FF GSDSAPHP K +Y AGV++Q F + Y+A F L+ L+ F + Sbjct 249 GKPYFFFGSDSAPHPVQNKANYEGVCAGVYSQSFAIPYIAQVFEEQNALENLKGFVSDFG 308 Query 66 AAFFGLPKKELVEGEDCVVLEQTPCRIPNVVCGAEGTSTDVVPFLAGHELGYTLKVVP 123 +F+ + E+ + ++ ++ IP V+ ++G ++PF AG +L ++++ P Sbjct 309 ISFYEVKDSEVASSDKAILFKKEQV-IPQVI--SDGKDISIIPFKAGDKLSWSVRWEP 363 > eco:b1062 pyrC, ECK1047, JW1049; dihydro-orotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Length=348 Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 55/123 (44%), Gaps = 16/123 (13%) Query 2 QVVREGHPQFFLGSDSAPHPRHKKDSYPPAAGVFTQPFLLAYLADTFARAGCLDKLQSFA 61 ++V G + FLG+DSAPH RH+K+S AG F P L A F L ++F Sbjct 237 ELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFC 296 Query 62 CENAAAFFGLPKK----ELVEGEDCVVLEQTPCRIPNVVCGAEGTSTDVVPFLAGHELGY 117 N F+GLP ELV E V T +VPFLAG + + Sbjct 297 SVNGPQFYGLPVNDTFIELVREEQ------------QVAESIALTDDTLVPFLAGETVRW 344 Query 118 TLK 120 ++K Sbjct 345 SVK 347 > tpv:TP04_0882 dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Length=295 Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust. Identities = 14/24 (58%), Positives = 20/24 (83%), Gaps = 0/24 (0%) Query 1 LQVVREGHPQFFLGSDSAPHPRHK 24 L+ ++ GHP+FFLGSDSAPH ++ Sbjct 241 LETLKSGHPRFFLGSDSAPHTQYN 264 > mmu:327762 Dna2, Dna2l, E130315B21Rik, KIAA0083; DNA replication helicase 2 homolog (yeast) (EC:3.6.4.12); K10742 DNA replication ATP-dependent helicase Dna2 [EC:3.6.4.12] Length=1062 Score = 30.0 bits (66), Expect = 2.1, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query 3 VVREGHPQFFLGSDSAPHPRHKKDSYPPAAGVFTQPFLLAYLADTFARAGC 53 V+ +P FL +D P P ++ T+ L+ +L TF +AGC Sbjct 886 VLEPDNPVCFLNTDKVPAPEQVENG---GVSNVTEARLIVFLTSTFIKAGC 933 > bbo:BBOV_III006600 17.m07584; hypothetical protein Length=728 Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust. Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 0/21 (0%) Query 76 LVEGEDCVVLEQTPCRIPNVV 96 ++E DCV + Q P R+PNV+ Sbjct 276 IIEFNDCVEVHQLPPRVPNVI 296 Lambda K H 0.322 0.138 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2099897216 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40