bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_2815_orf1 Length=185 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_063050 60S ribosomal protein L13, putative ; K02873... 133 4e-31 cpv:cgd2_2990 60S ribosomal protein L13 ; K02873 large subunit... 103 4e-22 ath:AT5G23900 60S ribosomal protein L13 (RPL13D); K02873 large... 99.0 7e-21 ath:AT3G49010 ATBBC1; ATBBC1 (ARABIDOPSIS THALIANA BREAST BASI... 98.6 1e-20 cel:C32E8.2 rpl-13; Ribosomal Protein, Large subunit family me... 94.0 3e-19 ath:AT3G48960 60S ribosomal protein L13 (RPL13C); K02873 large... 86.3 5e-17 tpv:TP01_0199 60S ribosomal protein L13e; K02873 large subunit... 84.7 2e-16 dre:378961 rpl13, zgc:92272; ribosomal protein L13; K02873 lar... 82.8 6e-16 hsa:6137 RPL13, BBC1, D16S444E, FLJ27453, FLJ27454, MGC117342,... 75.9 8e-14 xla:446306 rpl13, MGC81947; ribosomal protein L13 (EC:3.6.5.3)... 75.1 1e-13 xla:100049095 hypothetical protein LOC100049095; K02873 large ... 74.7 2e-13 mmu:270106 Rpl13, L13; ribosomal protein L13 (EC:3.6.5.3); K02... 74.7 2e-13 mmu:100040605 Gm15710, OTTMUSG00000025606; predicted gene 15710 74.7 mmu:100039656 Gm12918, OTTMUSG00000009186; predicted gene 1291... 74.7 2e-13 mmu:100040416 Gm10071; predicted gene 10071 73.9 sce:YDL082W RPL13A; L13A; K02873 large subunit ribosomal prote... 72.8 6e-13 bbo:BBOV_IV005370 23.m06407; ribosomal protein L13; K02873 lar... 71.2 2e-12 pfa:PF08_0075 60S ribosomal protein L13-2, putative; K02873 la... 69.3 7e-12 sce:YMR142C RPL13B; L13B; K02873 large subunit ribosomal prote... 67.4 3e-11 > tgo:TGME49_063050 60S ribosomal protein L13, putative ; K02873 large subunit ribosomal protein L13e Length=319 Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 64/109 (58%), Positives = 76/109 (69%), Gaps = 3/109 (2%) Query 1 ACCCFPQAKMVSRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPLG 60 + CF KMVS++ LPNVHL K WQR+V+TWF+QP RKQ RRL+RQ+KAAKLGV P G Sbjct 99 SVVCFSSVKMVSKNNVLPNVHLHKWWQRYVKTWFNQPGRKQSRRLRRQEKAAKLGVVPSG 158 Query 61 LLRPAVRCPTQKYNIKLREGRGFTLEELK---VSPDCCCCCCCCCCCTR 106 LLRP V PTQ+YN+K+R GRGFTLEELK +SP R Sbjct 159 LLRPIVHPPTQRYNLKVRAGRGFTLEELKSVGLSPRVALSIGVAVDHRR 207 > cpv:cgd2_2990 60S ribosomal protein L13 ; K02873 large subunit ribosomal protein L13e Length=207 Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 10/99 (10%) Query 17 LPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPLGLLRPAVRCPTQKYNIK 76 +PNVH K ++R+++TW++QP RKQ RR+ RQK A+ G RP+G+LRP V PTQ+YN+K Sbjct 7 IPNVHYHKNYKRWIKTWYNQPGRKQSRRIARQKAVAEAGFRPVGMLRPIVHPPTQRYNMK 66 Query 77 LREGRGFTLEELKVSPDCCCCCCCCCCCTRPASLLGLCC 115 R GRGFTLEEL C + A +G+ Sbjct 67 TRLGRGFTLEEL----------SACGINKKAAMSIGIAV 95 > ath:AT5G23900 60S ribosomal protein L13 (RPL13D); K02873 large subunit ribosomal protein L13e Length=206 Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 53/102 (51%), Positives = 64/102 (62%), Gaps = 5/102 (4%) Query 17 LPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVRCPTQKYNI 75 +P+ H RK WQ +V+TWF+QPARK RRR+ RQKKA K+ RP G LRP V T KYN+ Sbjct 7 IPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNM 66 Query 76 KLREGRGFTLEELKVS--PDCCCCCCCCCCCTRPA--SLLGL 113 K+R G+GFTLEELKV+ P R SL GL Sbjct 67 KVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGL 108 > ath:AT3G49010 ATBBC1; ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome Length=206 Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/102 (50%), Positives = 63/102 (61%), Gaps = 5/102 (4%) Query 17 LPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVRCPTQKYNI 75 +PN H +K WQ +V+TWF+QPARK RRR+ RQKKA K+ RP G LRP V T KYN+ Sbjct 7 IPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNM 66 Query 76 KLREGRGFTLEELKVS--PDCCCCCCCCCCCTRPA--SLLGL 113 K+R G+GFTLEELK + P R SL GL Sbjct 67 KVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGL 108 > cel:C32E8.2 rpl-13; Ribosomal Protein, Large subunit family member (rpl-13); K02873 large subunit ribosomal protein L13e Length=207 Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 47/84 (55%), Positives = 58/84 (69%), Gaps = 2/84 (2%) Query 10 MVSRSAQ-LPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVR 67 M R Q L N H RK W + ++TWFDQPARK RRR RQ KA ++ RP+ GLLR VR Sbjct 1 MAPRGNQMLGNAHFRKHWHKRIKTWFDQPARKLRRRQNRQAKAVEIAPRPVAGLLRSVVR 60 Query 68 CPTQKYNIKLREGRGFTLEELKVS 91 CP ++YN K R GRGF+L+ELK + Sbjct 61 CPQKRYNTKTRLGRGFSLQELKAA 84 > ath:AT3G48960 60S ribosomal protein L13 (RPL13C); K02873 large subunit ribosomal protein L13e Length=206 Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 1/76 (1%) Query 17 LPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVRCPTQKYNI 75 +PN H +K+W+ +V+T F+QPA K RRR+ RQ KA K+ RP G +RP V T YN+ Sbjct 7 IPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNM 66 Query 76 KLREGRGFTLEELKVS 91 K+R G+GFTLEELK + Sbjct 67 KVRAGKGFTLEELKAA 82 > tpv:TP01_0199 60S ribosomal protein L13e; K02873 large subunit ribosomal protein L13e Length=205 Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 0/82 (0%) Query 10 MVSRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPLGLLRPAVRCP 69 MV + L +VH K RFV+ +Q +K+RRRL RQ+KAA G+ P G LRP V P Sbjct 1 MVKHNNMLSDVHRVKCSHRFVKPVLNQAGKKKRRRLARQRKAAASGLTPTGYLRPLVHMP 60 Query 70 TQKYNIKLREGRGFTLEELKVS 91 +++YN KLR GRGFTL+ELKV+ Sbjct 61 SRRYNYKLRFGRGFTLQELKVA 82 > dre:378961 rpl13, zgc:92272; ribosomal protein L13; K02873 large subunit ribosomal protein L13e Length=211 Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 1/81 (1%) Query 12 SRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVRCPT 70 SR+ + N H K+WQ+ VRTWF+QPARK RRR RQ KA ++ RP+ G LRP VRCPT Sbjct 4 SRNGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPT 63 Query 71 QKYNIKLREGRGFTLEELKVS 91 +Y+ K+R GRGFTLEELK + Sbjct 64 IRYHTKVRAGRGFTLEELKAA 84 > hsa:6137 RPL13, BBC1, D16S444E, FLJ27453, FLJ27454, MGC117342, MGC71373; ribosomal protein L13; K02873 large subunit ribosomal protein L13e Length=211 Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query 12 SRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVRCPT 70 SR+ + H K+WQR V TWF+QPARK RRR RQ KA ++ RP G +RP VRCPT Sbjct 4 SRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPT 63 Query 71 QKYNIKLREGRGFTLEELKVSPDCCCCCCCCCCCTRP 107 +Y+ K+R GRGF+LEEL+V+ P Sbjct 64 VRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDP 100 > xla:446306 rpl13, MGC81947; ribosomal protein L13 (EC:3.6.5.3); K02873 large subunit ribosomal protein L13e Length=211 Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query 12 SRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVRCPT 70 SR+ + H K+WQR V TWF+QPARK RRR RQ KA + RP+ G +RP VRCPT Sbjct 4 SRNGMILKPHFHKDWQRRVTTWFNQPARKIRRRKARQVKARLVAPRPVSGPVRPVVRCPT 63 Query 71 QKYNIKLREGRGFTLEELKVSPDCCCCCCCCCCCTRP 107 +Y+ K+R GRGF+LEELK + P Sbjct 64 NRYHTKVRAGRGFSLEELKAAGINKKVARTIGISVDP 100 > xla:100049095 hypothetical protein LOC100049095; K02873 large subunit ribosomal protein L13e Length=211 Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query 12 SRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVRCPT 70 SR+ + H K+WQ+ V TWF+QPARK RRR RQ KA ++ RP G +RP VRCPT Sbjct 4 SRNGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPT 63 Query 71 QKYNIKLREGRGFTLEELKVSPDCCCCCCCCCCCTRP 107 +Y+ K+R GRGF+LEEL+V+ P Sbjct 64 VRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDP 100 > mmu:270106 Rpl13, L13; ribosomal protein L13 (EC:3.6.5.3); K02873 large subunit ribosomal protein L13e Length=211 Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query 12 SRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVRCPT 70 SR+ + H K+WQ+ V TWF+QPARK RRR RQ KA ++ RP G +RP VRCPT Sbjct 4 SRNGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPT 63 Query 71 QKYNIKLREGRGFTLEELKVSPDCCCCCCCCCCCTRP 107 +Y+ K+R GRGF+LEEL+V+ P Sbjct 64 VRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDP 100 > mmu:100040605 Gm15710, OTTMUSG00000025606; predicted gene 15710 Length=211 Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query 12 SRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVRCPT 70 SR+ + H K+WQ+ V TWF+QPARK RRR RQ KA ++ RP G +RP VRCPT Sbjct 4 SRNGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPT 63 Query 71 QKYNIKLREGRGFTLEELKVSPDCCCCCCCCCCCTRP 107 +Y+ K+R GRGF+LEEL+V+ P Sbjct 64 VRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDP 100 > mmu:100039656 Gm12918, OTTMUSG00000009186; predicted gene 12918; K02873 large subunit ribosomal protein L13e Length=211 Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query 12 SRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVRCPT 70 SR+ + H K+WQ+ V TWF+QPARK RRR RQ KA ++ RP G +RP VRCPT Sbjct 4 SRNGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPT 63 Query 71 QKYNIKLREGRGFTLEELKVSPDCCCCCCCCCCCTRP 107 +Y+ K+R GRGF+LEEL+V+ P Sbjct 64 VRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDP 100 > mmu:100040416 Gm10071; predicted gene 10071 Length=211 Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query 12 SRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPL-GLLRPAVRCPT 70 SR+ + H K+WQ+ V TWF+QPARK RRR RQ KA + RP G +RP VRCPT Sbjct 4 SRNGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARSIAPRPASGPIRPIVRCPT 63 Query 71 QKYNIKLREGRGFTLEELKVSPDCCCCCCCCCCCTRP 107 +Y+ K+R GRGF+LEEL+V+ P Sbjct 64 VRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDP 100 > sce:YDL082W RPL13A; L13A; K02873 large subunit ribosomal protein L13e Length=199 Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 0/81 (0%) Query 11 VSRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPLGLLRPAVRCPT 70 +S++ + H RK WQ V+ FDQ +K RR R +AAK+ RPL LLRP VR PT Sbjct 3 ISKNLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARATRAAKIAPRPLDLLRPVVRAPT 62 Query 71 QKYNIKLREGRGFTLEELKVS 91 KYN K+R GRGFTL E+K + Sbjct 63 VKYNRKVRAGRGFTLAEVKAA 83 > bbo:BBOV_IV005370 23.m06407; ribosomal protein L13; K02873 large subunit ribosomal protein L13e Length=202 Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 0/75 (0%) Query 17 LPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPLGLLRPAVRCPTQKYNIK 76 LPN H K +F+R DQ RK+RR L R++KAAK GV P+G LRP V P+++YN K Sbjct 7 LPNAHRVKCSGKFIRAELDQAGRKKRRLLARRQKAAKAGVTPVGYLRPVVHMPSRRYNYK 66 Query 77 LREGRGFTLEELKVS 91 +R GRGFT++ELK + Sbjct 67 VRLGRGFTIQELKAA 81 > pfa:PF08_0075 60S ribosomal protein L13-2, putative; K02873 large subunit ribosomal protein L13e Length=215 Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 10/105 (9%) Query 10 MVSRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPLGLLRPAVRCP 69 MV+ + LPNVHL K WQR VR F + +K++RRL R+K+ G P+ L P V CP Sbjct 1 MVAHNNVLPNVHLHKWWQRHVRVNFSKNIKKKKRRLLREKRRKANGGTPIEKLHPIVHCP 60 Query 70 TQKYNIKLREGRGFTLEELKVSPDCCCCCCCCCCCTRPASLLGLC 114 TQ+YN + R G+GFT EELK R A +G+C Sbjct 61 TQRYNFRTRLGKGFTFEELK----------GAGLTPRAAQTIGIC 95 > sce:YMR142C RPL13B; L13B; K02873 large subunit ribosomal protein L13e Length=199 Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 0/81 (0%) Query 11 VSRSAQLPNVHLRKEWQRFVRTWFDQPARKQRRRLQRQKKAAKLGVRPLGLLRPAVRCPT 70 +S++ + H RK WQ V+ FDQ +K RR R +AAK+ RPL LLRP VR PT Sbjct 3 ISKNLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARAARAAKIAPRPLDLLRPVVRAPT 62 Query 71 QKYNIKLREGRGFTLEELKVS 91 KYN K+R GRGFTL E+K + Sbjct 63 VKYNRKVRAGRGFTLAEVKAA 83 Lambda K H 0.328 0.135 0.482 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5106150148 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40