bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_2816_orf1
Length=109
Score E
Sequences producing significant alignments: (Bits) Value
tpv:TP04_0766 hypothetical protein 63.2 2e-10
bbo:BBOV_III008620 17.m07753; RNA recognition motif domain con... 62.4 4e-10
ath:AT5G55550 RNA recognition motif (RRM)-containing protein; ... 55.1 5e-08
ath:AT1G58470 ATRBP1; ATRBP1 (ARABIDOPSIS THALIANA RNA-BINDING... 54.3 1e-07
tgo:TGME49_065530 RNA binding motif-containing protein 54.3 1e-07
ath:AT3G13224 RNA recognition motif (RRM)-containing protein 53.5 2e-07
ath:AT4G26650 RNA recognition motif (RRM)-containing protein; ... 52.0 4e-07
ath:AT3G07810 heterogeneous nuclear ribonucleoprotein, putativ... 51.6 7e-07
dre:323529 fc01g05, wu:fc01g05; zgc:77366 50.1 2e-06
ath:AT5G40490 RNA recognition motif (RRM)-containing protein; ... 48.9 4e-06
ath:AT5G47620 heterogeneous nuclear ribonucleoprotein, putativ... 48.9 4e-06
pfa:PFD0700c RNA binding protein, putative 48.5 5e-06
xla:397751 hnrnpa1, hnrpa1; ribonucleoprotein A1a; K12741 hete... 48.5 6e-06
dre:334222 hnrnpa0, fi36h08, hnrpa0, wu:fa16d06, wu:fi36h08, z... 47.8 8e-06
xla:380381 hnrnpa1, MGC52620, hnrpa1; heterogeneous nuclear ri... 47.8 8e-06
ath:AT4G14300 heterogeneous nuclear ribonucleoprotein, putativ... 47.8 1e-05
ath:AT2G33410 heterogeneous nuclear ribonucleoprotein, putativ... 47.4 1e-05
hsa:3178 HNRNPA1, HNRPA1, HNRPA1L3, MGC102835, hnRNP_A1, hnRNP... 47.0 2e-05
mmu:15382 Hnrnpa1, D15Ertd119e, Hdp, Hnrpa1, MGC102127, MGC102... 45.8 3e-05
tgo:TGME49_064610 heterogeneous nuclear ribonucleoprotein A3, ... 45.8 3e-05
mmu:21841 Tia1, 2310050N03Rik, AI256674, TIA-1, mTIA-1; cytoto... 45.8 3e-05
xla:447602 MGC84815 protein 45.8 4e-05
ath:AT1G60000 29 kDa ribonucleoprotein, chloroplast, putative ... 45.4 4e-05
xla:414562 hnrpdl-b, MGC81335, hnRNP, jktbp, jktbp2, laauf1; h... 45.4 5e-05
cel:Y73B6BL.6 sqd-1; homologous to Drosophila SQD (squid) prot... 45.4 5e-05
hsa:10949 HNRNPA0, HNRPA0; heterogeneous nuclear ribonucleopro... 45.1 5e-05
mmu:545091 Gm5803, EG545091, MGC189927; predicted gene 5803; K... 45.1 6e-05
mmu:77134 Hnrnpa0, 1110055B05Rik, 3010025E17Rik, Hnrpa0; heter... 45.1 6e-05
bbo:BBOV_IV008980 23.m05983; ribonucleoprotein; K14411 RNA-bin... 44.7 7e-05
cel:R10E9.1 msi-1; MuSashI (fly neural) family member (msi-1);... 44.7 7e-05
mmu:100504930 heterogeneous nuclear ribonucleoprotein A3-like 43.9 1e-04
hsa:124540 MSI2, FLJ36569, MGC3245, MSI2H; musashi homolog 2 (... 43.9 1e-04
hsa:7072 TIA1, TIA-1; TIA1 cytotoxic granule-associated RNA bi... 43.9 1e-04
xla:447385 tia1, MGC84540, tia-1; TIA1 cytotoxic granule-assoc... 43.9 1e-04
mmu:76626 Msi2, 1700105C15Rik, AI451722, AI563628, AW489193, M... 43.9 1e-04
xla:379158 hnrnpa2, MGC132139, MGC52881; heterogeneous nuclear... 43.9 1e-04
dre:751729 hnrnpa3, MGC153703, zgc:153703; heterogeneous nucle... 43.9 1e-04
dre:793165 tia1, MGC55520, fb73d10, wu:fb73d10, wu:fc02b04, zg... 43.5 1e-04
dre:321466 hnrnpab, hm:zeh1271, hnrpab, wu:fa18g02, wu:fb07b06... 43.5 2e-04
hsa:144983 HNRNPA1L2, MGC102957; heterogeneous nuclear ribonuc... 43.5 2e-04
mmu:70248 Dazap1, 2410042M16Rik, mPrrp; DAZ associated protein... 43.5 2e-04
xla:379296 hnrpdl-a, MGC53310, hnRNP, hnrpdl, jktbp, jktbp2, l... 43.1 2e-04
mmu:21843 Tial1, 5330433G13Rik, AL033329, TIAR, mTIAR; Tia1 cy... 43.1 2e-04
mmu:100505318 heterogeneous nuclear ribonucleoprotein A3-like 42.7 2e-04
xla:399260 msi2, Msi2h, musashi-2, musashi2, xrp1; musashi hom... 42.7 3e-04
ath:AT4G36960 RNA recognition motif (RRM)-containing protein 42.7 3e-04
hsa:7073 TIAL1, MGC33401, TCBP, TIAR; TIA1 cytotoxic granule-a... 42.7 3e-04
dre:393467 MGC66127; zgc:66127; K12741 heterogeneous nuclear r... 42.7 3e-04
cpv:cgd7_4480 T8M16_190 RRM protein of possible plant origin 42.7 3e-04
mmu:229279 Hnrnpa3, 2410013L13Rik, 2610209F03Rik, 2610510D13Ri... 42.7 3e-04
> tpv:TP04_0766 hypothetical protein
Length=481
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 58/99 (58%), Gaps = 16/99 (16%)
Query 9 MLAGKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSC 68
M G++RG+ F++++ +T + H++ K+VD+R + + A
Sbjct 151 MATGRHRGFGFVTLKVQPNTMSVFKDTHVVSGKRVDVRAMQTDVA--------------- 195
Query 69 SSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIR 107
++ R KIF+GG++ ++ EE+LQ++F +FG ++K TI+R
Sbjct 196 -ASLRKKIFVGGLSKALNEEMLQEYFSKFGEVDKVTIMR 233
Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query 59 ERPPERRLSCSSA--NRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
E+PP + ++ + K F+GG+ + E L HF ++G I + ++RD
Sbjct 99 EKPPSAVATVNTLIDSTLKFFVGGLHPNTDEGELSAHFAKYGQILASQVMRD 150
> bbo:BBOV_III008620 17.m07753; RNA recognition motif domain containing
protein; K14411 RNA-binding protein Musashi
Length=362
Score = 62.4 bits (150), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 16/97 (16%)
Query 11 AGKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSS 70
+G++RG+ F+++ +TE + EH + K VD+R + + A S
Sbjct 118 SGRSRGFGFVTLYVQENTENLFSDEHNVNGKHVDVRRMQNDAA----------------S 161
Query 71 ANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIR 107
+ KIF+GG+ S++E++L+ FE+FG++EK TI+R
Sbjct 162 NMKRKIFVGGLPKSLSEQMLKTFFERFGAVEKVTIMR 198
Score = 35.0 bits (79), Expect = 0.062, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 0/40 (0%)
Query 69 SSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
S R K F+GG+ ++ E +L +HF ++G + A ++RD
Sbjct 76 SPQERLKFFVGGLHPTVDEGMLTEHFMKYGRVITAQVMRD 115
> ath:AT5G55550 RNA recognition motif (RRM)-containing protein;
K14411 RNA-binding protein Musashi
Length=460
Score = 55.1 bits (131), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query 12 GKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLS---- 67
G+ RG+ FI P +E + +HII D R + +K A R ++ +R S
Sbjct 44 GRARGFGFIVFADPCVSERVIMDKHII-----DGRTVEAKKAVPRDDQQVLKRHASPIHL 98
Query 68 -----CSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GG+ SSITEE + +F+QFG+I ++ D
Sbjct 99 MSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYD 144
Score = 36.2 bits (82), Expect = 0.026, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGGI+ EE L+ +F +G + +A I+RD
Sbjct 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRD 40
> ath:AT1G58470 ATRBP1; ATRBP1 (ARABIDOPSIS THALIANA RNA-BINDING
PROTEIN 1); RNA binding / single-stranded RNA binding; K14411
RNA-binding protein Musashi
Length=360
Score = 54.3 bits (129), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query 8 QMLAGKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQP------ERP 61
+ + GK RG+ F+ D L H I K VD+R+ K +QP ER
Sbjct 40 EKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERK 99
Query 62 PE------RRLSCS--SANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRDG 109
+ R +S + ++ KIF+GG++S+ TEE + +FE+FG ++ DG
Sbjct 100 VQQMNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDG 155
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 28/37 (75%), Gaps = 0/37 (0%)
Query 72 NRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
+R+K+F+GGI +EE L+Q+F ++G++ +A + ++
Sbjct 4 DRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKE 40
> tgo:TGME49_065530 RNA binding motif-containing protein
Length=492
Score = 54.3 bits (129), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 16/103 (15%)
Query 7 LQMLAGKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRL 66
+ + G+NRG+ F+++ EA A+H I K+V++R L
Sbjct 142 MDKMTGRNRGFCFVTMGSEEAKEAIFNAQHAIGGKKVEVRPLHD---------------- 185
Query 67 SCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRDG 109
+ + + KIF+GG+ S++E +++ F +FG+++K +IIRD
Sbjct 186 DGNVSLKRKIFVGGVNPSLSESDVEKCFSKFGTVDKVSIIRDA 228
Score = 28.1 bits (61), Expect = 7.5, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K F+GGI TE ++ +FE+FG ++ + D
Sbjct 110 KFFVGGIIPQATELQIRSYFERFGKVKAVELKMD 143
> ath:AT3G13224 RNA recognition motif (RRM)-containing protein
Length=358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query 11 AGKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSS 70
G+ RG+ FI+ P + + H+I KQV+I+ K A Q
Sbjct 56 TGQPRGFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQ----------SKD 105
Query 71 ANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI S++TE+ L+ F ++G++ + +IRD
Sbjct 106 IKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRD 143
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 0/42 (0%)
Query 67 SCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
S A+ KIFIGG+ T + +HF ++G I + I+RD
Sbjct 12 SGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRD 53
> ath:AT4G26650 RNA recognition motif (RRM)-containing protein;
K14411 RNA-binding protein Musashi
Length=452
Score = 52.0 bits (123), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query 12 GKNRGYAFISVRPPLDTEAFLTAEHIIRDKQV-DIRELSSKPAPERQPERPPERRLS--- 67
G+ RG+ FI P AE +I DK + D R + +K A R ++ +R S
Sbjct 50 GRARGFGFIVFADPS------VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMH 103
Query 68 ---------CSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
A KIF+GG+ SSITE + +F+QFG+I ++ D
Sbjct 104 LISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYD 153
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 29/40 (72%), Gaps = 0/40 (0%)
Query 69 SSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
S+++ K+FIGGI+ EE LQ++F ++G + +A I+RD
Sbjct 7 SASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRD 46
> ath:AT3G07810 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=494
Score = 51.6 bits (122), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query 12 GKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCS-- 69
G+ RG+ F+ P E +T +H +D R + +K A R + R S S
Sbjct 44 GRARGFGFVVFADPAVAEIVITEKH-----NIDGRLVEAKKAVPRDDQNMVNRSNSSSIQ 98
Query 70 -----SANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GG+ SS+TE + +FEQFG+ ++ D
Sbjct 99 GSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYD 142
Score = 37.7 bits (86), Expect = 0.010, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGGI+ EE L+++F FG + +A I++D
Sbjct 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKD 40
> dre:323529 fc01g05, wu:fc01g05; zgc:77366
Length=305
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query 13 KNRGYAFISVRPPLDTEAFLTAE-HIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSA 71
++R + F++ P + ++ ++A HI+ V++ K A R+ PE + A
Sbjct 49 RSRCFGFVTYSSPDEADSAMSARPHILDGNNVEL-----KRAVAREDAGKPE-----ALA 98
Query 72 NRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIFIGG+ I E+ L+ F QFG++EKA +I D
Sbjct 99 KVKKIFIGGLKDDIEEDHLRDCFSQFGAVEKAEVITD 135
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+F+GG+ T++ L+ HFEQ+G + ++++
Sbjct 11 KLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQN 44
> ath:AT5G40490 RNA recognition motif (RRM)-containing protein;
K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=423
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query 11 AGKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSS 70
G+ RG+ F++ + + HII KQV+I+ P +S +
Sbjct 79 TGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTI------------PRGSMSSND 126
Query 71 ANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI SS+ ++ ++ F QFG +++ I+RD
Sbjct 127 FKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRD 164
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GG+ T +HF ++G I + I++D
Sbjct 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKD 76
> ath:AT5G47620 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=431
Score = 48.9 bits (115), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 0/97 (0%)
Query 12 GKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSA 71
G+ RG+ F+ P E + +HII K V+ ++ + + + S +
Sbjct 44 GRARGFGFVVFADPNVAERVVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPS 103
Query 72 NRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
N KIF+GG+ SS+TE +++F QFG I ++ D
Sbjct 104 NSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYD 140
Score = 35.4 bits (80), Expect = 0.051, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGGI+ +E+ L+ +F FG + +A I++D
Sbjct 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKD 40
> pfa:PFD0700c RNA binding protein, putative
Length=358
Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
+NRG+AF+++ ++ E L H + K+VD+RE E + S
Sbjct 153 RNRGFAFVTMASHINKERILRDTHELNGKRVDVRE---------------ENNTTPSDIQ 197
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
R KIF+GG+ T++ L+ +F FG I+ I+ D
Sbjct 198 R-KIFVGGLNYYWTKDTLESYFSTFGEIDVVQIVLD 232
Score = 35.4 bits (80), Expect = 0.049, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K FIGGI IT + + ++FEQ+G+++ I +D
Sbjct 115 KFFIGGIPQYITSKHITEYFEQYGTVQHVVIAQD 148
> xla:397751 hnrnpa1, hnrpa1; ribonucleoprotein A1a; K12741 heterogeneous
nuclear ribonucleoprotein A1/A3
Length=365
Score = 48.5 bits (114), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ + +A +TA R +VD R + K A R+ P L+
Sbjct 53 RSRGFGFVTYLSTDEVDAAMTA----RPHKVDGRVVEPKRAVSREDSSRPGAHLTVK--- 105
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI E+ L+++FEQ+G IE I+ D
Sbjct 106 --KIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTD 139
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 26/34 (76%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++ T+E L++HFEQ+G++ ++RD
Sbjct 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRD 48
> dre:334222 hnrnpa0, fi36h08, hnrpa0, wu:fa16d06, wu:fi36h08,
zgc:77280; heterogeneous nuclear ribonucleoprotein A0; K12894
heterogeneous nuclear ribonucleoprotein A0
Length=314
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query 13 KNRGYAFISVRPPLDTEAFLTAE-HIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSA 71
++R + F++ + +A + A H++ K V++ K A R+ PE + A
Sbjct 47 RSRCFGFVTYSTSEEADAAMAARPHVVDGKNVEV-----KRAVAREDAGRPE-----ALA 96
Query 72 NRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GG+ I E+ L + F QFG IEK+ +I D
Sbjct 97 KVKKIFVGGLKDDIEEKDLTEFFSQFGMIEKSEVITD 133
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+F+GG+ T + L+ +FEQFG++ ++++
Sbjct 9 KLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQN 42
> xla:380381 hnrnpa1, MGC52620, hnrpa1; heterogeneous nuclear
ribonucleoprotein A1; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=399
Score = 47.8 bits (112), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ + +A +TA R +VD R + K A R+ P L+
Sbjct 53 RSRGFGFVTYSSTDEVDAAMTA----RPHKVDGRVVEPKRAVSREDSSRPGAHLTVK--- 105
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI E L+++FEQ+G IE I+ D
Sbjct 106 --KIFVGGIKEDTEEHHLREYFEQYGKIEVIEIMTD 139
Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 26/34 (76%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++ T+E L++HFEQ+G++ ++RD
Sbjct 15 KLFIGGLSFETTDESLREHFEQWGALTDCVVMRD 48
> ath:AT4G14300 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=411
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query 10 LAGKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPE---RQPERPPERRL 66
L G+ RG+ F+ P + L +H I ++VD++ S+ + R R
Sbjct 42 LTGRPRGFGFVIFSDPSVLDRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSS 101
Query 67 SCSSANR-HKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
+ N+ KIF+GG+ ++T+E +Q+FE +G + I+ D
Sbjct 102 GGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYD 144
Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 27/38 (71%), Gaps = 0/38 (0%)
Query 71 ANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
+++ K+F+GGI+ E+ L++HF +G + +A ++RD
Sbjct 3 SDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRD 40
> ath:AT2G33410 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=404
Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query 12 GKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSA 71
G+ RG+ F++ P + L +H I ++ VD++ S+ E+ P R +A
Sbjct 44 GRPRGFGFVAFSDPAVIDRVLQDKHHIDNRDVDVKRAMSRE------EQSPAGRSGTFNA 97
Query 72 NRH----------KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
+R+ KIF+GG+ ++T + + +FE +G + A I+ D
Sbjct 98 SRNFDSGANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMID 144
Score = 35.8 bits (81), Expect = 0.039, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 27/38 (71%), Gaps = 0/38 (0%)
Query 71 ANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
+++ K+FIGGI+ E +L+++F FG + + T++R+
Sbjct 3 SDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMRE 40
> hsa:3178 HNRNPA1, HNRPA1, HNRPA1L3, MGC102835, hnRNP_A1, hnRNP-A1;
heterogeneous nuclear ribonucleoprotein A1; K12741 heterogeneous
nuclear ribonucleoprotein A1/A3
Length=320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ + +A + A R +VD R + K A R+ + P L+
Sbjct 53 RSRGFGFVTYATVEEVDAAMNA----RPHKVDGRVVEPKRAVSREDSQRPGAHLTVK--- 105
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI E L+ +FEQ+G IE I+ D
Sbjct 106 --KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTD 139
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++ T+E L+ HFEQ+G++ ++RD
Sbjct 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
> mmu:15382 Hnrnpa1, D15Ertd119e, Hdp, Hnrpa1, MGC102127, MGC102128,
MGC103392, hnRNP_A1, hnrnp-A1; heterogeneous nuclear
ribonucleoprotein A1; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=373
Score = 45.8 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ + +A + A R +VD R + K A R+ + P L+
Sbjct 53 RSRGFGFVTYATVEEVDAAMNA----RPHKVDGRVVEPKRAVSREDSQRPGAHLTVK--- 105
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI E L+ +FEQ+G IE I+ D
Sbjct 106 --KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTD 139
Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 9/51 (17%)
Query 58 PERPPERRLSCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
P+ P + R K+FIGG++ T+E L+ HFEQ+G++ ++RD
Sbjct 7 PKEPEQLR---------KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
> tgo:TGME49_064610 heterogeneous nuclear ribonucleoprotein A3,
putative ; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=430
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query 7 LQMLAGKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRL 66
G++RG+ FI+ P H + QV++R R R R
Sbjct 156 FDKFTGRSRGFGFITFTTPDPVARVADMRHTVDGTQVEVR---------RAIPREEARDH 206
Query 67 SCSSANRH--KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
A+R ++F+GGI+ + +E L+ +F +G I+ A ++ D
Sbjct 207 GGPGADRDAGRLFVGGISDDVNDESLRAYFRHYGEIQSANVMVD 250
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query 55 ERQPERPPERRLSCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
+R P + P++ L K+F+GG++ S T + L+ +F+Q+G + + ++ D
Sbjct 109 QRSPPQEPDKELQM-----RKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFD 157
> mmu:21841 Tia1, 2310050N03Rik, AI256674, TIA-1, mTIA-1; cytotoxic
granule-associated RNA binding protein 1; K13201 nucleolysin
TIA-1/TIAR
Length=377
Score = 45.8 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query 9 MLAGKNRGYAFISVRPPLDTEAFLT--AEHIIRDKQVDIRELSSKPAPERQPERPPERRL 66
M GK++GY F+S D E + + +Q+ + KP + ++L
Sbjct 132 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL 191
Query 67 SC------SSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
S SS N ++ GG+TS +TE++++Q F FG I + + D
Sbjct 192 SYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 239
Score = 32.0 bits (71), Expect = 0.50, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 0/39 (0%)
Query 70 SANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
++N +F+G ++ IT E ++ F FG I A +++D
Sbjct 93 TSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKD 131
> xla:447602 MGC84815 protein
Length=291
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
K+RG+ F++ + + + R +VD +++ SK A R+ E PE +
Sbjct 52 KSRGFGFVTFK----EASSVDKAQADRPHKVDGKDVDSKRAMPRE-ETSPEVHAAVK--- 103
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATII 106
KIF+GG+ +T E L ++F +FG++ A+I+
Sbjct 104 --KIFVGGLKKDVTNEDLAEYFGKFGNVTDASIV 135
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+F+GG+ E+ L+ ++ Q+G I +++D
Sbjct 14 KLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKD 47
> ath:AT1G60000 29 kDa ribonucleoprotein, chloroplast, putative
/ RNA-binding protein cp29, putative
Length=258
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query 12 GKNRGYAFISVRPPLDTEAFLT----AEHIIRDKQVDIRELSSKPAPERQPERPPERRLS 67
G++RG+AF+++ D + E++ R +V+ + KP P ++P P
Sbjct 123 GQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVN---FADKPKPNKEPLYPE----- 174
Query 68 CSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRDG 109
HK+F+G ++ ++T E L F + G + A ++ DG
Sbjct 175 ----TEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDG 212
> xla:414562 hnrpdl-b, MGC81335, hnRNP, jktbp, jktbp2, laauf1;
heterogeneous nuclear ribonucleoprotein D-like
Length=291
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query 10 LAGKNRGYAFISVRPPLDTEAFL-TAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSC 68
+ G++RG+ F+ + + + L T EH + K +D K A Q + PP+
Sbjct 70 VTGRSRGFGFVLFKDAVSVDKVLETKEHKLDGKLID-----PKRAKALQGKEPPK----- 119
Query 69 SSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+F+GG++ TEE ++Q+F FG IE + D
Sbjct 120 ------KVFVGGLSPETTEEQIKQYFGGFGEIENIELPMD 153
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 0/36 (0%)
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
R K+FIGG++ +++ L ++ +FG + TI D
Sbjct 33 RSKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTD 68
> cel:Y73B6BL.6 sqd-1; homologous to Drosophila SQD (squid) protein
family member (sqd-1); K03102 squid
Length=308
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 21/91 (23%)
Query 12 GKNRGYAFISVRPPLDTEAFLTA-EHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSS 70
G++RG+AF+ + L A E I+ K V++ KPA R+ +
Sbjct 67 GRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEV-----KPAKSRENK----------- 110
Query 71 ANRHKIFIGGITSSITEEILQQHFEQFGSIE 101
K+F+GG+ S +E+ L+ HFEQFG ++
Sbjct 111 ----KVFVGGLPSDYSEQDLRSHFEQFGKVD 137
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI+ + E L HF Q+G + +A + D
Sbjct 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYD 63
> hsa:10949 HNRNPA0, HNRPA0; heterogeneous nuclear ribonucleoprotein
A0; K12894 heterogeneous nuclear ribonucleoprotein A0
Length=305
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query 13 KNRGYAFISVRPPLDTEAFLTAE-HIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSA 71
++R + F++ + +A + A H + V+++ S+ RP + A
Sbjct 46 RSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSR----EDSARPG------AHA 95
Query 72 NRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+F+GG+ + E L +HF QFG++EKA II D
Sbjct 96 KVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIAD 132
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 0/32 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATII 106
K+FIGG+ +E L+ HFE FG++ ++
Sbjct 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVV 39
> mmu:545091 Gm5803, EG545091, MGC189927; predicted gene 5803;
K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=320
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ + +A + A R +VD + + K A RQ + P L
Sbjct 53 RSRGFGFVTYATVEEVDAAMNA----RPHKVDGKVVEPKRAISRQDSQRPGAHLIVK--- 105
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI E L+ +FEQ+G IE I+ D
Sbjct 106 --KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTD 139
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++ T++ L+ HFEQ+G++ ++RD
Sbjct 15 KLFIGGLSFQTTDKSLRSHFEQWGTLTDCVVMRD 48
> mmu:77134 Hnrnpa0, 1110055B05Rik, 3010025E17Rik, Hnrpa0; heterogeneous
nuclear ribonucleoprotein A0; K12894 heterogeneous
nuclear ribonucleoprotein A0
Length=305
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query 13 KNRGYAFISVRPPLDTEAFLTAE-HIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSA 71
++R + F++ + +A + A H + V+++ S+ RP + A
Sbjct 46 RSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSR----EDSARPG------AHA 95
Query 72 NRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+F+GG+ + E L +HF QFG++EKA II D
Sbjct 96 KVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIAD 132
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 0/32 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATII 106
K+FIGG+ +E L+ HFE FG++ ++
Sbjct 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVV 39
> bbo:BBOV_IV008980 23.m05983; ribonucleoprotein; K14411 RNA-binding
protein Musashi
Length=306
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query 12 GKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSA 71
G++RG+ F++ +A L H I + D+++ K ER + P R
Sbjct 70 GRSRGFGFVTFSNDAALKAVLAVSHKIDNVLADVKQAIKK---ERARDLLPTRE----EV 122
Query 72 NRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
NR IF+GGI +I+E+ + +F ++GS+ I D
Sbjct 123 NR--IFVGGIADNISEDEFKDYFGKYGSVLNYNFIVD 157
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 0/47 (0%)
Query 62 PERRLSCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
P + + S +KIF GG+ S T E L+ +F ++G++ + I+ D
Sbjct 20 PSKLFNESDYEAYKIFAGGLNRSTTAETLRNYFSKYGTVVHSEIVAD 66
> cel:R10E9.1 msi-1; MuSashI (fly neural) family member (msi-1);
K14411 RNA-binding protein Musashi
Length=320
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query 15 RGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSANRH 74
RG+ FI+ P + L R+ ++D +++ K A P+R +
Sbjct 86 RGFGFITFVDPSSVDKVLNN----REHELDGKKIDPKVAF-------PKRTQAKLVTKTK 134
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++++ T E ++Q+FE +G +E A ++ D
Sbjct 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFD 168
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 0/42 (0%)
Query 67 SCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
S S + K+FIGG++ T E L+ +F +FG + + ++RD
Sbjct 38 SHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
> mmu:100504930 heterogeneous nuclear ribonucleoprotein A3-like
Length=209
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ + +A + A R +VD R + K A R+ P L+
Sbjct 52 RSRGFGFVTYSCVEEVDAAMCA----RPHKVDGRVVEPKRAVSREDSVKPGAHLTVK--- 104
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI E L+ +FE++G IE ++ D
Sbjct 105 --KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMED 138
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 26/34 (76%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++ T++ L++HFE++G++ ++RD
Sbjct 14 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRD 47
> hsa:124540 MSI2, FLJ36569, MGC3245, MSI2H; musashi homolog 2
(Drosophila); K14411 RNA-binding protein Musashi
Length=328
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ P + L H EL SK P+ RR
Sbjct 60 RSRGFGFVTFADPASVDKVLGQPH---------HELDSKTI---DPKVAFPRRAQPKMVT 107
Query 73 R-HKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
R KIF+GG++++ E ++Q+FEQFG +E A ++ D
Sbjct 108 RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFD 144
Score = 32.0 bits (71), Expect = 0.47, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++ + + L+ +F +FG I + ++RD
Sbjct 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRD 55
> hsa:7072 TIA1, TIA-1; TIA1 cytotoxic granule-associated RNA
binding protein; K13201 nucleolysin TIA-1/TIAR
Length=375
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query 9 MLAGKNRGYAFISVRPPLDTEAFLT--AEHIIRDKQVDIRELSSKPAPERQPERPPERRL 66
M GK++GY F+S D E + + +Q+ + KP + ++L
Sbjct 130 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL 189
Query 67 SC------SSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
S SS + ++ GG+TS +TE++++Q F FG I + + D
Sbjct 190 SYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD 237
Score = 32.0 bits (71), Expect = 0.46, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 0/39 (0%)
Query 70 SANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
++N +F+G ++ IT E ++ F FG I A +++D
Sbjct 91 TSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKD 129
> xla:447385 tia1, MGC84540, tia-1; TIA1 cytotoxic granule-associated
RNA binding protein; K13201 nucleolysin TIA-1/TIAR
Length=389
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query 9 MLAGKNRGYAFISVRPPLDTEAFLT--AEHIIRDKQVDIRELSSKP-APERQPERPP--- 62
M GK++GY F+S D E + + +Q+ + KP AP+ E
Sbjct 141 MTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNAKQL 200
Query 63 --ERRLSCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
E ++ SS + ++ GG+TS +TE++++Q F FG I + + D
Sbjct 201 TYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEVRVFPD 248
Score = 30.0 bits (66), Expect = 2.1, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query 38 IRDKQVDIRELSSKPAPERQPERPPERRLSCSSANRHKIFIGGITSSITEEILQQHFEQF 97
I K+V + ++ P+ +++ + S + +F+G ++ IT + ++ F F
Sbjct 71 IMGKEVKV-NWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAFAPF 129
Query 98 GSIEKATIIRD 108
G I A +++D
Sbjct 130 GRISDARVVKD 140
> mmu:76626 Msi2, 1700105C15Rik, AI451722, AI563628, AW489193,
MGC118040, MGC130496, Msi2h; Musashi homolog 2 (Drosophila);
K14411 RNA-binding protein Musashi
Length=346
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ P + L H EL SK P+ RR
Sbjct 60 RSRGFGFVTFADPASVDKVLGQPH---------HELDSKTI---DPKVAFPRRAQPKMVT 107
Query 73 R-HKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
R KIF+GG++++ E ++Q+FEQFG +E A ++ D
Sbjct 108 RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFD 144
Score = 32.0 bits (71), Expect = 0.50, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++ + + L+ +F +FG I + ++RD
Sbjct 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRD 55
> xla:379158 hnrnpa2, MGC132139, MGC52881; heterogeneous nuclear
ribonucleoprotein A2 homolog 2
Length=358
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ + +A ++A R +D R + K A R+ P ++
Sbjct 48 RSRGFGFVTFSCMNEVDAAMSA----RPHTIDGRVVEPKRAVAREESAKPGAHVTVK--- 100
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+F+GGI E L+++FE++G IE II D
Sbjct 101 --KLFVGGIKEDTEEHHLREYFEEYGKIESTEIITD 134
Score = 35.0 bits (79), Expect = 0.061, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++ TEE L+ +EQ+G + ++RD
Sbjct 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRD 43
> dre:751729 hnrnpa3, MGC153703, zgc:153703; heterogeneous nuclear
ribonucleoprotein A3; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=234
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ + +A +TA R +VD R + K A R+ P L+
Sbjct 52 RSRGFGFVTYSSVSEVDAAMTA----RPHKVDGRVVEPKRAVSREDSNKPGAHLTVK--- 104
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATII 106
KIF+GGI E ++++FE +G IE I+
Sbjct 105 --KIFVGGIKEDTEEYHIREYFECYGKIETIDIM 136
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++ TE+ L+ HFEQ+G + ++RD
Sbjct 14 KLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRD 47
> dre:793165 tia1, MGC55520, fb73d10, wu:fb73d10, wu:fc02b04,
zgc:55520; cytotoxic granule-associated RNA binding protein
1; K13201 nucleolysin TIA-1/TIAR
Length=386
Score = 43.5 bits (101), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query 9 MLAGKNRGYAFISVRPPLDTEAFL--TAEHIIRDKQVDIRELSSKPAPERQPERPPERRL 66
M GK++GY F+S D E + + +Q+ + KP + + L
Sbjct 131 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKATYETNTKHL 190
Query 67 SC------SSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
S SS + ++ GG+T+ +TE++++Q F FG I + + D
Sbjct 191 SFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPD 238
Score = 31.2 bits (69), Expect = 0.88, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 0/39 (0%)
Query 70 SANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
++N +F+G ++ IT + ++ F FG I A +++D
Sbjct 92 TSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKD 130
> dre:321466 hnrnpab, hm:zeh1271, hnrpab, wu:fa18g02, wu:fb07b06,
wu:fb16c05, zeh1271; heterogeneous nuclear ribonucleoprotein
A/B; K13044 heterogeneous nuclear ribonucleoprotein A/B/D
Length=340
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 18/98 (18%)
Query 12 GKNRGYAFISVRPPLDTEAFLT-AEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSS 70
G++RG+ FI + P + L EH + +Q+D P++ ++
Sbjct 107 GRSRGFGFILFKEPSGVDKVLAQKEHRLDGRQID-----------------PKKAMAMKK 149
Query 71 ANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GG+ TEE ++++F FG IE + D
Sbjct 150 EPVKKIFVGGLNPETTEERIREYFGAFGEIETIELPMD 187
Score = 29.3 bits (64), Expect = 3.6, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+F+GG++ +++ L+ +F +FG + TI D
Sbjct 70 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMD 103
> hsa:144983 HNRNPA1L2, MGC102957; heterogeneous nuclear ribonucleoprotein
A1-like 2; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=320
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query 13 KNRGYAFISVRPPLDTEAFL-TAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSA 71
++RG+ F++ + +A + T H +VD R + K A R+ + P L+
Sbjct 53 RSRGFGFVTYATVEEVDAAMNTTPH-----KVDGRVVEPKRAVSREDSQRPGAHLTVK-- 105
Query 72 NRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI E L+ +FEQ+G IE I+ D
Sbjct 106 ---KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTD 139
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++ T+E L+ HFEQ+G++ ++RD
Sbjct 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
> mmu:70248 Dazap1, 2410042M16Rik, mPrrp; DAZ associated protein
1; K14411 RNA-binding protein Musashi
Length=406
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPER--QPER--PPE---RR 65
++RG+ F+ + P L + R +D R + KP R QPER P E +
Sbjct 49 QSRGFGFVKFKDPNCVGTVLAS----RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKG 104
Query 66 LSCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRDG 109
S+ +KIF+GGI + E L+++F++FG + + +I D
Sbjct 105 PRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDA 148
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+F+GG+ S T+E L+ +F Q+G + I++D
Sbjct 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKD 44
> xla:379296 hnrpdl-a, MGC53310, hnRNP, hnrpdl, jktbp, jktbp2,
laauf1; heterogeneous nuclear ribonucleoprotein D-like; K13044
heterogeneous nuclear ribonucleoprotein A/B/D
Length=293
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 17/93 (18%)
Query 10 LAGKNRGYAFISVRPPLDTEAFL-TAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSC 68
+ G++RG+ F+ + + + L T EH + K +D K A + + PP+
Sbjct 62 VTGRSRGFGFVLFKDAVSVDKVLETNEHKLDGKLID-----PKRAKALKGKEPPK----- 111
Query 69 SSANRHKIFIGGITSSITEEILQQHFEQFGSIE 101
K+F+GG++ TEE ++Q+F FG IE
Sbjct 112 ------KVFVGGLSPETTEEQIKQYFGGFGEIE 138
> mmu:21843 Tial1, 5330433G13Rik, AL033329, TIAR, mTIAR; Tia1
cytotoxic granule-associated RNA binding protein-like 1; K13201
nucleolysin TIA-1/TIAR
Length=392
Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query 9 MLAGKNRGYAFISVRPPLDTEAFLT--AEHIIRDKQVDIRELSSKPAPERQPERPPERRL 66
M GK++GY F+S LD E + + +Q+ + KP + + ++L
Sbjct 149 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQL 208
Query 67 ------SCSSANRHKIFIGGITSSITEEILQQHFEQFGSI 100
+ SS ++ GGI S +T+++++Q F FG I
Sbjct 209 RFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQI 248
Score = 32.7 bits (73), Expect = 0.32, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 0/39 (0%)
Query 70 SANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
++N +F+G ++ IT E ++ F FG I A +++D
Sbjct 110 TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 148
> mmu:100505318 heterogeneous nuclear ribonucleoprotein A3-like
Length=357
Score = 42.7 bits (99), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ + +A + A R +VD R + K A R+ P L+
Sbjct 52 RSRGFGFVTYSCVEEVDAAMCA----RPHRVDGRVVEPKRAVSREDSVKPGAHLTVK--- 104
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI E L+ +FE++G+IE ++ D
Sbjct 105 --KIFVGGIKEDTEEYNLRDYFEKYGNIETIEVMED 138
Score = 37.0 bits (84), Expect = 0.015, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 9/51 (17%)
Query 58 PERPPERRLSCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
P+ P + R K+FIGG++ T++ L++HFE++G++ ++RD
Sbjct 6 PKEPEQLR---------KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRD 47
> xla:399260 msi2, Msi2h, musashi-2, musashi2, xrp1; musashi homolog
2; K14411 RNA-binding protein Musashi
Length=406
Score = 42.7 bits (99), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ P + L H ++D + + K A R+ + R
Sbjct 60 RSRGFGFVTFADPASVDKVLAQPH----HELDSKTIDPKVAFPRRAQPKMVTRTK----- 110
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GG++++ E ++Q+FEQ+G +E A ++ D
Sbjct 111 --KIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFD 144
Score = 31.6 bits (70), Expect = 0.60, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 75 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+FIGG++ + + L+ +F +FG I + ++RD
Sbjct 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRD 55
> ath:AT4G36960 RNA recognition motif (RRM)-containing protein
Length=379
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query 12 GKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSA 71
G++RG+ +++ D + L EH + ++ +++ K A ++ R P ++++
Sbjct 41 GRSRGFGYVTFASAEDAKNALKGEHFLGNRILEV-----KVATPKEEMRQPAKKVT---- 91
Query 72 NRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
+IF+ I SS++E + HFE++G I + +D
Sbjct 92 ---RIFVARIPSSVSESDFRSHFERYGEITDLYMPKD 125
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 0/35 (0%)
Query 74 HKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
+KIF+G + + + L+ +F +FG I+ A I +D
Sbjct 240 NKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKD 274
> hsa:7073 TIAL1, MGC33401, TCBP, TIAR; TIA1 cytotoxic granule-associated
RNA binding protein-like 1; K13201 nucleolysin TIA-1/TIAR
Length=392
Score = 42.7 bits (99), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query 9 MLAGKNRGYAFISVRPPLDTEAFLT--AEHIIRDKQVDIRELSSKP-APERQPERPP--- 62
M GK++GY F+S LD E + + +Q+ + KP AP+ E
Sbjct 149 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL 208
Query 63 --ERRLSCSSANRHKIFIGGITSSITEEILQQHFEQFGSI 100
E ++ SS ++ GGI S +T+++++Q F FG I
Sbjct 209 RFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQI 248
Score = 32.7 bits (73), Expect = 0.30, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 0/39 (0%)
Query 70 SANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
++N +F+G ++ IT E ++ F FG I A +++D
Sbjct 110 TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 148
> dre:393467 MGC66127; zgc:66127; K12741 heterogeneous nuclear
ribonucleoprotein A1/A3
Length=388
Score = 42.7 bits (99), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ + +A + A R +VD R + K A R+ P + +
Sbjct 54 RSRGFGFVTYSSVGEVDAAMDA----RPHKVDGRAVEPKRAVSREDSSKPG-----AHST 104
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
K+F+GGI EE L+++F QFG I++ I+ +
Sbjct 105 VKKMFVGGIKEDTDEEHLREYFGQFGKIDEVNIMTE 140
Score = 40.4 bits (93), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 8/56 (14%)
Query 53 APERQPERPPERRLSCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
+ E+Q R PE+ K+FIGG++ T+E L+ HFEQ+G++ ++RD
Sbjct 2 SKEQQTPREPEQL--------RKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRD 49
> cpv:cgd7_4480 T8M16_190 RRM protein of possible plant origin
Length=383
Score = 42.7 bits (99), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query 12 GKNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIR-------ELSSKPAPERQPERPPER 64
G++RGY F++ + + I+ +Q+ ++ E + P + +
Sbjct 125 GRSRGYGFVTYKSSESIKKLFNENLILNGRQLLVKLAADPFSEFTCGPIDCNKQVMESNQ 184
Query 65 RLSCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
RL+ S+ + K+FI ++ S T E L+Q F +F IE+ ++RD
Sbjct 185 RLT-STIFKKKLFIRNLSESTTNESLRQAFSEFEDIEECFVMRD 227
Score = 29.3 bits (64), Expect = 2.9, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 9/50 (18%)
Query 59 ERPPERRLSCSSANRHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
ER P R ++ + I+ ++++ FE+FG IE +TIIR+
Sbjct 82 ERSPVSR---------RVMVRNISFQTSDKVFLNLFEKFGEIEDSTIIRE 122
> mmu:229279 Hnrnpa3, 2410013L13Rik, 2610209F03Rik, 2610510D13Rik,
Hnrpa3, MGC101940, MGC37309; heterogeneous nuclear ribonucleoprotein
A3; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=357
Score = 42.7 bits (99), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query 13 KNRGYAFISVRPPLDTEAFLTAEHIIRDKQVDIRELSSKPAPERQPERPPERRLSCSSAN 72
++RG+ F++ + +A + A R +VD R + K A R+ P L+
Sbjct 52 RSRGFGFVTYSCVEEVDAAMCA----RPHKVDGRVVEPKRAVSREDSVKPGAHLTVK--- 104
Query 73 RHKIFIGGITSSITEEILQQHFEQFGSIEKATIIRD 108
KIF+GGI E L+ +FE++G IE ++ D
Sbjct 105 --KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMED 138
Lambda K H
0.320 0.137 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2072286120
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40