bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_2936_orf2 Length=85 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_009690 U2 small nuclear ribonucleoprotein, putative... 94.0 1e-19 pfa:PFI1695c small nuclear ribonucleoprotein (snRNP), putative 90.1 1e-18 bbo:BBOV_III005750 17.m07512; U2 small nuclear ribonucleoprote... 88.6 4e-18 tpv:TP02_0377 U2 small nuclear ribonucleoprotein B; K11094 U2 ... 84.0 1e-16 ath:AT2G47580 U1A; U1A (SPLICEOSOMAL PROTEIN U1A); RNA binding... 73.9 1e-13 hsa:6629 SNRPB2, MGC24807, MGC45309, Msl1; small nuclear ribon... 72.0 4e-13 mmu:20639 Snrpb2, 2810052G09Rik; U2 small nuclear ribonucleopr... 72.0 5e-13 xla:443886 MGC80122 protein 71.2 7e-13 ath:AT2G30260 U2B''; U2B'' (U2 small nuclear ribonucleoprotein... 68.6 5e-12 xla:495019 snrpb2; small nuclear ribonucleoprotein polypeptide... 67.4 1e-11 xla:379781 snrpa, MGC52976, U1A, snf; small nuclear ribonucleo... 66.6 2e-11 dre:324121 snrpa, fc19d01, wu:fc19d01, zgc:77810; small nuclea... 65.5 4e-11 mmu:53607 Snrpa, C430021M15Rik, Rnu1a-1, Rnu1a1, U1A; small nu... 65.1 6e-11 ath:AT1G06960 small nuclear ribonucleoprotein U2B, putative / ... 65.1 6e-11 hsa:6626 SNRPA, Mud1, U1-A, U1A; small nuclear ribonucleoprote... 64.7 7e-11 mmu:667350 Gm8587, EG667350; predicted pseudogene 8587 63.2 cel:K08D10.4 rnp-2; RNP (RRM RNA binding domain) containing fa... 62.4 3e-10 mmu:382099 Gm5161, EG382099; predicted pseudogene 5161 61.6 pfa:MAL13P1.35 U1 small nuclear ribonucleoprotein A, putative 58.9 4e-09 cel:K08D10.3 rnp-3; RNP (RRM RNA binding domain) containing fa... 52.4 3e-07 ath:AT1G76940 RNA recognition motif (RRM)-containing protein 51.6 6e-07 bbo:BBOV_III004120 17.m07378; U2 small nuclear ribonucleoprote... 51.2 7e-07 tgo:TGME49_109800 small nuclear ribonucleoprotein U1A, putative 48.5 5e-06 cel:F46A9.6 mec-8; MEChanosensory abnormality family member (m... 43.5 2e-04 ath:AT3G13700 RNA-binding protein, putative 43.5 2e-04 ath:AT1G21320 nucleic acid binding / nucleotide binding 43.1 2e-04 sce:YGR250C Putative RNA binding protein; localizes to stress ... 40.4 0.002 sce:YBR212W NGR1, RBP1; Ngr1p 39.7 0.002 mmu:15572 Elavl4, Elav, Hud, PNEM; ELAV (embryonic lethal, abn... 38.1 0.007 tpv:TP03_0036 hypothetical protein 38.1 0.007 hsa:1996 ELAVL4, HUD, PNEM; ELAV (embryonic lethal, abnormal v... 37.7 0.009 xla:386602 elavl4, HuD, elrD, elrD1, elrD2; ELAV (embryonic le... 37.7 0.009 ath:AT3G16380 PAB6; PAB6 (POLY(A) BINDING PROTEIN 6); RNA bind... 37.7 0.010 mmu:15569 Elavl2, Hub, mel-N1; ELAV (embryonic lethal, abnorma... 37.4 0.013 hsa:1993 ELAVL2, HEL-N1, HELN1, HUB; ELAV (embryonic lethal, a... 37.4 0.013 dre:321994 nono, wu:fb40d10, wu:fc11d05; non-POU domain contai... 37.0 0.014 xla:394342 elavl2-a, Xel-1, el-1, elavl2, elrB, hel-n1, heln1,... 37.0 0.017 ath:AT2G42240 nucleic acid binding / nucleotide binding 36.6 0.017 xla:397952 elavl2-b, elavl2, elrB, hel-n1, heln1, hub, xel-1; ... 36.6 0.017 hsa:5935 RBM3, IS1-RNPL, RNPL; RNA binding motif (RNP1, RRM) p... 36.6 0.021 dre:30737 elavl4, elrd, wu:fc24h01, zHuD; ELAV (embryonic leth... 36.6 0.021 cel:T23F6.4 rbd-1; RBD (RNA binding domain) protein family mem... 36.2 0.025 sce:YHR086W NAM8, MRE2, MUD15; Nam8p 36.2 0.025 ath:AT5G47320 RPS19; RPS19 (RIBOSOMAL PROTEIN S19); RNA bindin... 35.8 0.030 cel:C07A4.1 hypothetical protein 35.8 0.031 hsa:1995 ELAVL3, DKFZp547J036, HUC, HUCL, MGC20653, PLE21; ELA... 35.8 0.032 hsa:494115 RBMXL1, DKFZp547N1117, DKFZp667D0223, FLJ32614, RBM... 35.8 0.032 ath:AT5G07290 AML4; AML4 (ARABIDOPSIS MEI2-LIKE 4); RNA bindin... 35.8 0.032 pfa:PFI1025w RNA binding protein, putative 35.8 0.032 dre:30732 elavl3, HuC, elrc, id:ibd1248, wu:fb77b03, zHuC; ELA... 35.8 0.033 > tgo:TGME49_009690 U2 small nuclear ribonucleoprotein, putative ; K11094 U2 small nuclear ribonucleoprotein B'' Length=233 Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 0/73 (0%) Query 13 SLFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAAAEVALSGLQGFKI 72 SLF+ENL +K +L+ILF QY+G E RL+EGRGVAFVDF+ A A VA+ G+QGFK+ Sbjct 161 SLFIENLPPKATKTSLDILFGQYRGHTESRLIEGRGVAFVDFSTQAQAAVAMQGMQGFKV 220 Query 73 SSSHQLRISHVER 85 SH ++IS VE+ Sbjct 221 DPSHPIKISMVEK 233 > pfa:PFI1695c small nuclear ribonucleoprotein (snRNP), putative Length=193 Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 58/84 (69%), Gaps = 4/84 (4%) Query 4 SKGALEARA----SLFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAA 59 SK +E ++ +L V+NL + +K ALEILF+QY GF EVR + G+ +AFVDF A Sbjct 109 SKHNIEHKSNLIYTLLVQNLPDEINKNALEILFNQYPGFYEVRYIPGKNIAFVDFTAQEH 168 Query 60 AEVALSGLQGFKISSSHQLRISHV 83 AE++++GLQ FKI+ H ++IS V Sbjct 169 AEISMTGLQNFKITPHHPMKISWV 192 > bbo:BBOV_III005750 17.m07512; U2 small nuclear ribonucleoprotein B' Length=213 Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 2/81 (2%) Query 1 DGTSKGALEARASLFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAAA 60 D S+G R +LFVENL +K ++E+LF QY G+++ R VEG+ VAFVDFA Sbjct 128 DANSEGG--ERHTLFVENLHPDMNKMSVELLFQQYPGYKDTRFVEGKCVAFVDFATAYQG 185 Query 61 EVALSGLQGFKISSSHQLRIS 81 EVAL GLQGF +S SH LRIS Sbjct 186 EVALQGLQGFSVSHSHALRIS 206 > tpv:TP02_0377 U2 small nuclear ribonucleoprotein B; K11094 U2 small nuclear ribonucleoprotein B'' Length=206 Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 0/69 (0%) Query 13 SLFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAAAEVALSGLQGFKI 72 +LFV+N+ SK +LE+LF QY GFR R +EGR VAFVD++ + AE+AL GL GF++ Sbjct 135 ALFVQNIPHDMSKESLELLFKQYPGFRGCRFIEGRFVAFVDYSMASQAEIALEGLNGFRV 194 Query 73 SSSHQLRIS 81 S +H L+IS Sbjct 195 SHTHALQIS 203 > ath:AT2G47580 U1A; U1A (SPLICEOSOMAL PROTEIN U1A); RNA binding / nucleic acid binding / nucleotide binding Length=250 Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 6/89 (6%) Query 2 GTSKGALEARAS----LFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAA 56 G EA A LFV+NL T+ L++LF QY+GF+EVR++E + G+AFV+FA Sbjct 163 GMKPNMPEAPAPPNNILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAKPGIAFVEFAD 222 Query 57 PAAAEVALSGLQGFKISSSHQLRISHVER 85 + VA+ GLQGFKI + Q+ I++ ++ Sbjct 223 EMQSTVAMQGLQGFKIQQN-QMLITYAKK 250 > hsa:6629 SNRPB2, MGC24807, MGC45309, Msl1; small nuclear ribonucleoprotein polypeptide B; K11094 U2 small nuclear ribonucleoprotein B'' Length=225 Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVALSGLQGFKI 72 LF+ NL E T++ L +LF+Q+ GF+EVRLV GR +AFV+F A A LQGFKI Sbjct 153 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENDGQAGAARDALQGFKI 212 Query 73 SSSHQLRISHVER 85 + SH ++I++ ++ Sbjct 213 TPSHAMKITYAKK 225 > mmu:20639 Snrpb2, 2810052G09Rik; U2 small nuclear ribonucleoprotein B; K11094 U2 small nuclear ribonucleoprotein B'' Length=225 Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVALSGLQGFKI 72 LF+ NL E T++ L +LF+Q+ GF+EVRLV GR +AFV+F A A LQGFKI Sbjct 153 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENDGQAGAARDALQGFKI 212 Query 73 SSSHQLRISHVER 85 + SH ++I++ ++ Sbjct 213 TPSHAMKITYAKK 225 > xla:443886 MGC80122 protein Length=223 Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVALSGLQGFKI 72 LF+ NL E T++ L +LF+Q+ GF+EVRLV GR +AFV+F A A LQGFKI Sbjct 151 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENETEAGSARDALQGFKI 210 Query 73 SSSHQLRISHVER 85 + SH ++I++ ++ Sbjct 211 TPSHAMKITYAKK 223 Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 8/82 (9%) Query 8 LEARASLFVENLAEGTSKGALE----ILFSQYKGFREV---RLVEGRGVAFVDFAAPAAA 60 + ++++ NL + K L+ LFSQ+ ++ + ++ RG AFV F ++A Sbjct 3 IRPNHTVYINNLCDKVKKPELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELSSA 62 Query 61 EVALSGLQGFKISSSHQLRISH 82 AL LQGF S +RI + Sbjct 63 TNALRQLQGFPFYSK-PMRIQY 83 > ath:AT2G30260 U2B''; U2B'' (U2 small nuclear ribonucleoprotein B); RNA binding / nucleic acid binding / nucleotide binding; K11094 U2 small nuclear ribonucleoprotein B'' Length=232 Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVALSGLQGFKI 72 LF++NL T+ L++LF QY GF+E+R+++ + G+AFV++ A +A+ LQGFKI Sbjct 160 LFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKPGIAFVEYEDDVQASIAMQPLQGFKI 219 Query 73 SSSHQLRISHVER 85 + + + IS ++ Sbjct 220 TPQNPMVISFAKK 232 > xla:495019 snrpb2; small nuclear ribonucleoprotein polypeptide B; K11094 U2 small nuclear ribonucleoprotein B'' Length=223 Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVALSGLQGFKI 72 LF+ NL E T++ L +LF+Q+ GF+EVRLV GR +AFV+F A A LQGFKI Sbjct 151 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNETEAGSARDALQGFKI 210 Query 73 SSSHQLRISHVER 85 + S+ ++I+ ++ Sbjct 211 TPSNAMKITFAKK 223 > xla:379781 snrpa, MGC52976, U1A, snf; small nuclear ribonucleoprotein polypeptide A; K11091 U1 small nuclear ribonucleoprotein A Length=282 Score = 66.6 bits (161), Expect = 2e-11, Method: Composition-based stats. Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVALSGLQGFKI 72 LF+ NL E T++ L +LF+Q+ GF+EVRLV GR +AFV+F A A LQGFKI Sbjct 210 LFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARESLQGFKI 269 Query 73 SSSHQLRISHVER 85 + S+ ++IS ++ Sbjct 270 TQSNSMKISFAKK 282 Score = 32.7 bits (73), Expect = 0.26, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 7/65 (10%) Query 13 SLFVENLAEGTSKGALE----ILFSQYKGFREV---RLVEGRGVAFVDFAAPAAAEVALS 65 ++++ NL E K L+ +FSQ+ ++ R ++ RG AFV F ++A AL Sbjct 11 TIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRNLKMRGQAFVIFKETSSATNALR 70 Query 66 GLQGF 70 +QGF Sbjct 71 SMQGF 75 > dre:324121 snrpa, fc19d01, wu:fc19d01, zgc:77810; small nuclear ribonucleoprotein polypeptide A; K11091 U1 small nuclear ribonucleoprotein A Length=281 Score = 65.5 bits (158), Expect = 4e-11, Method: Composition-based stats. Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVALSGLQGFKI 72 LF+ NL E T++ L +LF+Q+ GF+EVRLV GR +AFV+F A A LQGFKI Sbjct 209 LFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAAREALQGFKI 268 Query 73 SSSHQLRISHVER 85 + S+ ++IS ++ Sbjct 269 TQSNAMKISFAKK 281 Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 7/65 (10%) Query 13 SLFVENLAEGTSKGALE----ILFSQYKGFREV---RLVEGRGVAFVDFAAPAAAEVALS 65 ++++ NL E K L+ +FSQ+ ++ R ++ +G AFV F +A AL Sbjct 11 TIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRTLKMKGQAFVIFKEINSASNALR 70 Query 66 GLQGF 70 +QGF Sbjct 71 SMQGF 75 > mmu:53607 Snrpa, C430021M15Rik, Rnu1a-1, Rnu1a1, U1A; small nuclear ribonucleoprotein polypeptide A; K11091 U1 small nuclear ribonucleoprotein A Length=287 Score = 65.1 bits (157), Expect = 6e-11, Method: Composition-based stats. Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVALSGLQGFKI 72 LF+ NL E T++ L +LF+Q+ GF+EVRLV GR +AFV+F A A LQGFKI Sbjct 215 LFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKI 274 Query 73 SSSHQLRISHVER 85 + ++ ++IS ++ Sbjct 275 TQNNAMKISFAKK 287 Score = 34.7 bits (78), Expect = 0.073, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 9/71 (12%) Query 9 EARA--SLFVENLAEGTSKGALE----ILFSQYKGFREV---RLVEGRGVAFVDFAAPAA 59 E RA ++++ NL E K L+ +FSQ+ ++ R+++ RG AFV F + Sbjct 11 ETRANHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRIMKMRGQAFVIFKEVTS 70 Query 60 AEVALSGLQGF 70 A AL +QGF Sbjct 71 ATNALRSMQGF 81 > ath:AT1G06960 small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative Length=200 Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%) Query 5 KGALEARASLFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVA 63 + + LF+ NL T+ L++LF QY GF+E+R++E + G+AFV++ + +A Sbjct 119 QDTMPPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPGIAFVEYEDDVQSSMA 178 Query 64 LSGLQGFKISSSHQLRISHVER 85 + LQGFKI+ + + +S ++ Sbjct 179 MQALQGFKITPQNPMVVSFAKK 200 > hsa:6626 SNRPA, Mud1, U1-A, U1A; small nuclear ribonucleoprotein polypeptide A; K11091 U1 small nuclear ribonucleoprotein A Length=282 Score = 64.7 bits (156), Expect = 7e-11, Method: Composition-based stats. Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVALSGLQGFKI 72 LF+ NL E T++ L +LF+Q+ GF+EVRLV GR +AFV+F A A LQGFKI Sbjct 210 LFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKI 269 Query 73 SSSHQLRISHVER 85 + ++ ++IS ++ Sbjct 270 TQNNAMKISFAKK 282 Score = 32.3 bits (72), Expect = 0.34, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 7/65 (10%) Query 13 SLFVENLAEGTSKGALE----ILFSQYKGFREV---RLVEGRGVAFVDFAAPAAAEVALS 65 ++++ NL E K L+ +FSQ+ ++ R ++ RG AFV F ++A AL Sbjct 11 TIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALR 70 Query 66 GLQGF 70 +QGF Sbjct 71 SMQGF 75 > mmu:667350 Gm8587, EG667350; predicted pseudogene 8587 Length=309 Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEG-RGVAFVDFAAPAAAEVALSGLQGFKI 72 LF+ NL E T++ L +LF+Q+ GF+E LV G +AFV+F A AL LQGFKI Sbjct 212 LFLTNLPEETNELMLSMLFTQFPGFKEAHLVPGCHDIAFVEFDNEVQAGAALDALQGFKI 271 Query 73 SSSHQLRISHVER 85 + ++ ++IS V++ Sbjct 272 TQNNAMKISFVKK 284 > cel:K08D10.4 rnp-2; RNP (RRM RNA binding domain) containing family member (rnp-2) Length=206 Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%) Query 6 GALEARASLFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVAL 64 G LF NL + + LEI+F+Q+ G +++R+V R G+AFV+F + A A Sbjct 126 GPAPPNKILFCTNLPDSATAEMLEIMFNQFAGLKDIRMVPNRPGIAFVEFDTDSLAIPAR 185 Query 65 SGLQGFKISSSHQLRISHVER 85 + L FKIS+ H +R+ + ++ Sbjct 186 TTLNNFKISAEHTMRVDYAKK 206 > mmu:382099 Gm5161, EG382099; predicted pseudogene 5161 Length=282 Score = 61.6 bits (148), Expect = 6e-10, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGR-GVAFVDFAAPAAAEVALSGLQGFKI 72 LF+ NL E T++ L +LF+Q+ GF+EVRLV GR + FV+F A A LQGFKI Sbjct 210 LFLTNLPEETNELMLSMLFTQFPGFKEVRLVPGRHDIDFVEFDNEVQAGAARDVLQGFKI 269 Query 73 SSSHQLRISHVER 85 + ++ ++IS ++ Sbjct 270 TQNNAMKISFAKK 282 > pfa:MAL13P1.35 U1 small nuclear ribonucleoprotein A, putative Length=449 Score = 58.9 bits (141), Expect = 4e-09, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAAAEVALSGLQGFKIS 73 LFVEN+ E A LF Y GF E R++ R VAFVDF A A+ +Q +++ Sbjct 379 LFVENVVENVDTQAFNDLFKNYAGFVEARIIPQRNVAFVDFTDETTATFAMKAVQNYELQ 438 Query 74 SSHQLRISHVER 85 S +L+IS+ +R Sbjct 439 GS-KLKISYAKR 449 > cel:K08D10.3 rnp-3; RNP (RRM RNA binding domain) containing family member (rnp-3) Length=217 Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEG-RGVAFVDFAAPAAAEVALSGLQGFKI 72 LF N+ EGT ++ +FSQ+ G REVR + + AF+++ + +E A L F+I Sbjct 145 LFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAFIEYESEDLSEPARQALDNFRI 204 Query 73 SSSHQLRI 80 + + Q+ + Sbjct 205 TPTQQITV 212 > ath:AT1G76940 RNA recognition motif (RRM)-containing protein Length=233 Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 9/76 (11%) Query 9 EARASLFVENLAEGTSKGALEILFSQYKGFREVRLVEGRG---------VAFVDFAAPAA 59 +A +L+VE L S+ + +F + G+REVRLV + FVDF PA Sbjct 133 DASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPAC 192 Query 60 AEVALSGLQGFKISSS 75 A ALS LQG+++ + Sbjct 193 AATALSALQGYRMDEN 208 > bbo:BBOV_III004120 17.m07378; U2 small nuclear ribonucleoprotein B' Length=285 Score = 51.2 bits (121), Expect = 7e-07, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Query 13 SLFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAAAEVALSGLQGFKI 72 +LFVE L EG S + +F++ GF+E R++ R VAF+DF A A+ LQ + Sbjct 214 TLFVEGLPEGVSLADVNAVFARSVGFQEARVIAARKVAFIDFDNEFNAGCAMQALQEHPM 273 Query 73 SSSHQLRISHVER 85 S LRIS+ +R Sbjct 274 GDS-TLRISYAKR 285 > tgo:TGME49_109800 small nuclear ribonucleoprotein U1A, putative Length=385 Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAAAEVALSGLQGFKIS 73 LF+ENL E + L LFS++ G EVR V R VAFV++ A A++ LQG+ ++ Sbjct 315 LFLENLPEDATMEGLVSLFSKHAGMIEVRPVLWRRVAFVEYDNEMLAANAMNALQGYNMN 374 Query 74 SSHQLRISHVER 85 S ++I++ R Sbjct 375 GS-SIKITYARR 385 Score = 32.7 bits (73), Expect = 0.27, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 8/87 (9%) Query 3 TSKGALEARASLFVENLAEGTSKGAL-EILFSQYKGFREVRLVEG------RGVAFVDFA 55 T ++ ++++ N+ + L E L S +K F E+R + RG A++ FA Sbjct 105 TQDMSIPPNQTIYINNINDKVKLPELKENLRSMFKQFGEIRQIVAMSSFWRRGQAWIVFA 164 Query 56 APAAAEVALSGLQGFKISSSHQLRISH 82 + +A A+ G+QGF + LRI++ Sbjct 165 SVESATKAIQGMQGF-VYHDQPLRINY 190 > cel:F46A9.6 mec-8; MEChanosensory abnormality family member (mec-8) Length=312 Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 4/83 (4%) Query 4 SKGALEARASLFVENLAEGTSKGALEILFSQYKGFREVRL--VEGRGVAFVDFAAPAAAE 61 S+ + A ++LFV NL+ ++ L +F + GF +RL G VAFV+++ A Sbjct 220 SQASTSACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKAT 279 Query 62 VALSGLQGFKISSSHQ--LRISH 82 A+ LQGF+I+++ + LRI + Sbjct 280 QAMISLQGFQITANDRGGLRIEY 302 > ath:AT3G13700 RNA-binding protein, putative Length=287 Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Query 4 SKGALEARA--SLFVENLAEGTSKGALEILFSQYKGFR--EVRLVEGRGVAFVDFAAPAA 59 S+G ARA +LF+ NL ++ L+ L S+Y GF ++R G VAF DF Sbjct 195 SEGGSGARACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRARGGMPVAFADFEEIEQ 254 Query 60 AEVALSGLQGFKISSS 75 A A++ LQG +SSS Sbjct 255 ATDAMNHLQGNLLSSS 270 > ath:AT1G21320 nucleic acid binding / nucleotide binding Length=253 Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 9/70 (12%) Query 13 SLFVENLAEGTSKGALEILFSQYKGFREVRLV---------EGRGVAFVDFAAPAAAEVA 63 +L+VE L S+ + +F + G+REVRLV + + FVDF A A A Sbjct 156 TLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATA 215 Query 64 LSGLQGFKIS 73 LS LQ +++ Sbjct 216 LSALQDYRMD 225 > sce:YGR250C Putative RNA binding protein; localizes to stress granules induced by glucose deprivation; interacts with Rbg1p in a two-hybrid Length=781 Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query 2 GTSKGALEARASLFVENLAEGTSKGALEILFSQYKGFREVRLV------EGRGVAFVDFA 55 G +K AL ++FV +A+ S G L LFS+Y ++L+ E G F+ + Sbjct 185 GVNKHALTYPGNIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYP 244 Query 56 APAAAEVALSGLQGFKISSSHQLRISHVER 85 + A + + L G ++ S HVER Sbjct 245 LGSQASLCIKELNGRTVNGSTLFINYHVER 274 > sce:YBR212W NGR1, RBP1; Ngr1p Length=672 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Query 13 SLFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAAAEVALSGLQGFKI 72 ++FV L T++ L LF + VR+ G+ FV F AE ++ GLQGF + Sbjct 361 TVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGFIV 420 Query 73 SSSHQLRIS 81 S +R+S Sbjct 421 GGS-PIRLS 428 > mmu:15572 Elavl4, Elav, Hud, PNEM; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); K13208 ELAV like protein 2/3/4 Length=380 Score = 38.1 bits (87), Expect = 0.007, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Query 12 ASLFVENLAEGTSKGALEILFSQYKGFREVRL----VEG--RGVAFVDFAAPAAAEVALS 65 A+L+V L + ++ LE LFSQY R+ V G RGV F+ F AE A+ Sbjct 132 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 191 Query 66 GLQGFKISSSHQ 77 GL G K S + + Sbjct 192 GLNGQKPSGATE 203 > tpv:TP03_0036 hypothetical protein Length=288 Score = 38.1 bits (87), Expect = 0.007, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 0/41 (0%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDF 54 LFVE+L +G + + LF GF E +L+ + VAF+DF Sbjct 205 LFVEDLPDGIAHEDVNNLFHHMPGFVETKLINSKHVAFIDF 245 > hsa:1996 ELAVL4, HUD, PNEM; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); K13208 ELAV like protein 2/3/4 Length=366 Score = 37.7 bits (86), Expect = 0.009, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Query 12 ASLFVENLAEGTSKGALEILFSQYKGFREVRL----VEG--RGVAFVDFAAPAAAEVALS 65 A+L+V L + ++ LE LFSQY R+ V G RGV F+ F AE A+ Sbjct 132 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 191 Query 66 GLQGFKISSSHQ 77 GL G K S + + Sbjct 192 GLNGQKPSGATE 203 > xla:386602 elavl4, HuD, elrD, elrD1, elrD2; ELAV (embryonic lethal, abnormal vision)-like 4 (Hu antigen D); K13208 ELAV like protein 2/3/4 Length=400 Score = 37.7 bits (86), Expect = 0.009, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Query 12 ASLFVENLAEGTSKGALEILFSQYKGFREVRL----VEG--RGVAFVDFAAPAAAEVALS 65 A+L+V L + ++ LE LFSQY R+ V G RGV F+ F AE A+ Sbjct 166 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 225 Query 66 GLQGFKISSSHQ 77 GL G K S + + Sbjct 226 GLNGQKPSGAAE 237 > ath:AT3G16380 PAB6; PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor Length=537 Score = 37.7 bits (86), Expect = 0.010, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query 13 SLFVENLAEGTSKGALEILFSQYKGFREVRLVE-----GRGVAFVDFAAPAAAEVALSGL 67 +++V+NL E + L LFSQY V ++ RG FV+F P A+ A+ L Sbjct 203 NVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCNPENAKKAMESL 262 Query 68 QGFKISS 74 G ++ S Sbjct 263 CGLQLGS 269 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query 12 ASLFVENLAEGTSKGALEILFSQYKGFREVRLVE----GRGVAFVDFAAPAAAEVALSGL 67 A+L+V+NL + LE +F + ++VE +G FV F +A A S L Sbjct 112 ANLYVKNLDSSITSSCLERMFCPFGSILSCKVVEENGQSKGFGFVQFDTEQSAVSARSAL 171 Query 68 QG 69 G Sbjct 172 HG 173 > mmu:15569 Elavl2, Hub, mel-N1; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B); K13208 ELAV like protein 2/3/4 Length=359 Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query 12 ASLFVENLAEGTSKGALEILFSQYKGFREVRL----VEG--RGVAFVDFAAPAAAEVALS 65 A+L+V L + ++ LE LFSQY R+ V G RGV F+ F AE A+ Sbjct 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query 66 GLQGFK 71 GL G K Sbjct 185 GLNGQK 190 > hsa:1993 ELAVL2, HEL-N1, HELN1, HUB; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B); K13208 ELAV like protein 2/3/4 Length=346 Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query 12 ASLFVENLAEGTSKGALEILFSQYKGFREVRL----VEG--RGVAFVDFAAPAAAEVALS 65 A+L+V L + ++ LE LFSQY R+ V G RGV F+ F AE A+ Sbjct 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query 66 GLQGFK 71 GL G K Sbjct 185 GLNGQK 190 > dre:321994 nono, wu:fb40d10, wu:fc11d05; non-POU domain containing, octamer-binding; K13214 non-POU domain-containing octamer-binding protein Length=441 Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query 11 RASLFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAAAEVALSGLQGF 70 R+ LFV NL GT++ +E LFS+Y E+ + + RG F+ A++A + L Sbjct 71 RSRLFVGNLPAGTTEEDVEKLFSKYGKASEIFINKDRGFGFIRLETKTLADIAKAELDD- 129 Query 71 KISSSHQLRI 80 I Q+R+ Sbjct 130 TIFRGRQIRV 139 > xla:394342 elavl2-a, Xel-1, el-1, elavl2, elrB, hel-n1, heln1, hub, p45; ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B); K13208 ELAV like protein 2/3/4 Length=389 Score = 37.0 bits (84), Expect = 0.017, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query 12 ASLFVENLAEGTSKGALEILFSQYKGFREVRL----VEG--RGVAFVDFAAPAAAEVALS 65 A+L+V L + ++ LE LFSQY R+ V G RGV F+ F AE A+ Sbjct 153 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 212 Query 66 GLQGFK 71 GL G K Sbjct 213 GLNGQK 218 > ath:AT2G42240 nucleic acid binding / nucleotide binding Length=302 Score = 36.6 bits (83), Expect = 0.017, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Query 13 SLFVENLAEGTSKGALEILFSQYKGFREVRL--VEGRGVAFVDFAAPAAAEVALSGLQGF 70 +LF+ N+ ++ L +FS+ +GF ++++ G VAFVDF + + AL LQG Sbjct 206 TLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGT 265 Query 71 KISSS 75 + SS Sbjct 266 VLYSS 270 > xla:397952 elavl2-b, elavl2, elrB, hel-n1, heln1, hub, xel-1; ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B); K13208 ELAV like protein 2/3/4 Length=389 Score = 36.6 bits (83), Expect = 0.017, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query 12 ASLFVENLAEGTSKGALEILFSQYKGFREVRL----VEG--RGVAFVDFAAPAAAEVALS 65 A+L+V L + ++ LE LFSQY R+ V G RGV F+ F AE A+ Sbjct 153 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 212 Query 66 GLQGFK 71 GL G K Sbjct 213 GLNGQK 218 > hsa:5935 RBM3, IS1-RNPL, RNPL; RNA binding motif (RNP1, RRM) protein 3; K13186 RNA-binding protein 3 Length=157 Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 7/75 (9%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVE------GRGVAFVDFAAPAAAEVALSGL 67 LFV L T + ALE FS + EV +V+ RG F+ F P A VA+ + Sbjct 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67 Query 68 QGFKISSSHQLRISH 82 G + Q+R+ H Sbjct 68 NGESL-DGRQIRVDH 81 > dre:30737 elavl4, elrd, wu:fc24h01, zHuD; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); K13208 ELAV like protein 2/3/4 Length=367 Score = 36.6 bits (83), Expect = 0.021, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 9/75 (12%) Query 12 ASLFVENLAEGTSKGALEILFSQYKGFREVRLV---------EGRGVAFVDFAAPAAAEV 62 A+L+V L + ++ LE LFSQY R++ RGV F+ F AE Sbjct 130 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEE 189 Query 63 ALSGLQGFKISSSHQ 77 A+ GL G K S + + Sbjct 190 AIKGLNGQKPSGAAE 204 > cel:T23F6.4 rbd-1; RBD (RNA binding domain) protein family member (rbd-1); K14787 multiple RNA-binding domain-containing protein 1 Length=872 Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 14/91 (15%) Query 8 LEARASLFVENLAEGTSKGALEILFSQYKG--------FREVRLVE-----GRGVAFVDF 54 +E+ ++LFV+NLA T+ G+LE LF + G +++ E G FV F Sbjct 637 IESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQF 696 Query 55 AAPAAAEVALSGLQGFKIS-SSHQLRISHVE 84 A+ AL +QG + S +L+ISH E Sbjct 697 YTAFDAKTALKDMQGELLDGHSLELKISHRE 727 > sce:YHR086W NAM8, MRE2, MUD15; Nam8p Length=523 Score = 36.2 bits (82), Expect = 0.025, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query 13 SLFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAAAEVALSGLQGFKI 72 ++F+ L+ ++ L F + V++ G+ FV + +AE A++G+QGF I Sbjct 314 TVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPI 373 Query 73 SSSHQLRIS 81 ++S ++R+S Sbjct 374 ANS-RVRLS 381 > ath:AT5G47320 RPS19; RPS19 (RIBOSOMAL PROTEIN S19); RNA binding; K02965 small subunit ribosomal protein S19 Length=212 Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 11/71 (15%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLVEG------RGVAFVDFAAPAAAEVALSG- 66 L++ L+ GT + +L+ FS + G E R++ RG FV+F + +A A+S Sbjct 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAM 92 Query 67 ----LQGFKIS 73 L GF IS Sbjct 93 NGQELNGFNIS 103 > cel:C07A4.1 hypothetical protein Length=360 Score = 35.8 bits (81), Expect = 0.031, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query 13 SLFVENLAEGTSKGALEILFSQYKGFREVRLVEGRGVAFVDFAAPAAAEVALSGLQGFKI 72 S++V N+++ T+ L LFS Y EVR+ + + AFV + A A+ + G K Sbjct 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNG-KE 296 Query 73 SSSHQLRIS 81 + +Q+R S Sbjct 297 MAGNQVRCS 305 > hsa:1995 ELAVL3, DKFZp547J036, HUC, HUCL, MGC20653, PLE21; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C); K13208 ELAV like protein 2/3/4 Length=367 Score = 35.8 bits (81), Expect = 0.032, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 6/66 (9%) Query 12 ASLFVENLAEGTSKGALEILFSQYKGFREVRLV------EGRGVAFVDFAAPAAAEVALS 65 A+L+V L + S+ +E LFSQY R++ RGV F+ F AE A+ Sbjct 125 ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 184 Query 66 GLQGFK 71 GL G K Sbjct 185 GLNGQK 190 Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Query 2 GTSKGALEARASLFVENLAEGTSKGALEILFSQYKGFREVRLVEGR------GVAFVDFA 55 GT+ +++ +L V L + ++ + LF +LV + G FV+++ Sbjct 29 GTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYS 88 Query 56 APAAAEVALSGLQGFKISS 74 P A+ A++ L G K+ + Sbjct 89 DPNDADKAINTLNGLKLQT 107 > hsa:494115 RBMXL1, DKFZp547N1117, DKFZp667D0223, FLJ32614, RBM1; RNA binding motif protein, X-linked-like 1; K12885 heterogeneous nuclear ribonucleoprotein G Length=390 Score = 35.8 bits (81), Expect = 0.032, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (9%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLV------EGRGVAFVDFAAPAAAEVALSGL 67 LF+ L T++ ALE +F +Y EV L+ + RG AFV F +PA A+ A + Sbjct 10 LFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDM 69 Query 68 QG 69 G Sbjct 70 NG 71 > ath:AT5G07290 AML4; AML4 (ARABIDOPSIS MEI2-LIKE 4); RNA binding / nucleic acid binding / nucleotide binding Length=907 Score = 35.8 bits (81), Expect = 0.032, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%) Query 10 ARASLFVENLAEGTSKGALEILFSQYKGFREV-RLVEGRGVAFVDFAAPAAAEVALSGLQ 68 + +L+V NL S L +FS Y REV R + +++F A+VAL GL Sbjct 293 SEGALWVNNLDSSISNEELHGIFSSYGEIREVRRTMHENSQVYIEFFDVRKAKVALQGLN 352 Query 69 GFKISSSHQLRIS 81 G ++ + QL+++ Sbjct 353 GLEV-AGRQLKLA 364 > pfa:PFI1025w RNA binding protein, putative Length=480 Score = 35.8 bits (81), Expect = 0.032, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query 14 LFVENLAEGTSKGALEILFSQYKGFREVRLV-----EGRGVAFVDFAAPAAAEVALSGLQ 68 L+V+N+ E +K E FS+ G+ E R V R A++DF A L LQ Sbjct 114 LYVKNINEHITKENFESYFSKIDGYIETRFVVDTSRTSRKFAYIDFENKTKALAFLHTLQ 173 Query 69 GFKISSSHQLRISHVE 84 I + L +++V+ Sbjct 174 NSNIENFKTLTLNNVD 189 > dre:30732 elavl3, HuC, elrc, id:ibd1248, wu:fb77b03, zHuC; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C); K13208 ELAV like protein 2/3/4 Length=345 Score = 35.8 bits (81), Expect = 0.033, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query 12 ASLFVENLAEGTSKGALEILFSQYKGFREVRL----VEG--RGVAFVDFAAPAAAEVALS 65 A+L+V L + S+ +E LFSQY R+ V G RGV F+ F AE A+ Sbjct 124 ANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVNQVTGISRGVGFIRFDKRNEAEEAIK 183 Query 66 GLQGFK 71 GL G K Sbjct 184 GLNGQK 189 Lambda K H 0.317 0.133 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2035463248 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40