bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_2940_orf1 Length=330 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_094670 eukaryotic translation initiation factor 3, ... 301 3e-81 bbo:BBOV_IV004370 23.m06488; translation initiation factor 3 s... 193 9e-49 tpv:TP01_0314 eukaryotic translation initiation factor 3 subun... 185 3e-46 pfa:MAL8P1.83 eukaryotictranslation initiation factor, putativ... 157 4e-38 ath:AT3G11400 EIF3G1; eukaryotic translation initiation factor... 120 1e-26 dre:393974 eif3g, MGC56553, eif3s4, zgc:56553; eukaryotic tran... 116 1e-25 xla:446311 eif3s4, MGC83369, eIF3g-A, eif3s4-A; eukaryotic tra... 112 2e-24 xla:447749 eIF3g-B, eif3s4-B; MGC83338 protein; K03248 transla... 110 1e-23 cpv:cgd4_1030 eukaryotic translation initiation factor ; K0324... 108 2e-23 ath:AT5G06000 EIF3G2; EIF3G2; RNA binding / translation initia... 105 2e-22 hsa:8666 EIF3G, EIF3-P42, EIF3S4, eIF3-delta, eIF3-p44; eukary... 105 2e-22 mmu:53356 Eif3g, 44kDa, D0Jmb4, Eif3s4, TU-189B2, eIF3-p44, p4... 105 3e-22 cel:F22B5.2 eif-3.G; Eukaryotic Initiation Factor family membe... 87.8 4e-17 sce:YDR429C TIF35; Tif35p; K03248 translation initiation facto... 87.4 6e-17 cel:F26A3.2 ncbp-2; Nuclear Cap-Binding Protein family member ... 56.2 1e-07 xla:100380998 ncbp2; nuclear cap binding protein subunit 2, 20... 55.1 3e-07 ath:AT2G44710 RNA recognition motif (RRM)-containing protein 53.5 1e-06 ath:AT4G34110 PAB2; PAB2 (POLY(A) BINDING 2); RNA binding / tr... 53.5 1e-06 ath:AT2G21440 RNA recognition motif (RRM)-containing protein; ... 53.1 2e-06 mmu:68092 Ncbp2, 20kDa, 5930413E18Rik, AA536802, AI843301, C79... 50.8 7e-06 ath:AT4G24770 RBP31; RBP31 (31-KDA RNA BINDING PROTEIN); RNA b... 50.8 7e-06 dre:192325 ncbp2, CHUNP6917, zgc:92592; nuclear cap binding pr... 50.8 7e-06 ath:AT3G10400 RNA recognition motif (RRM)-containing protein; ... 50.1 1e-05 ath:AT3G52660 RNA recognition motif (RRM)-containing protein 49.3 2e-05 hsa:1994 ELAVL1, ELAV1, HUR, Hua, MelG; ELAV (embryonic lethal... 49.3 2e-05 mmu:19652 Rbm3, 2600016C11Rik, MGC118410; RNA binding motif pr... 48.5 3e-05 mmu:100043257 Gm15453, OTTMUSG00000022091; predicted gene 15453 48.5 mmu:15572 Elavl4, Elav, Hud, PNEM; ELAV (embryonic lethal, abn... 48.5 3e-05 mmu:15568 Elavl1, 2410055N02Rik, HUR, Hua, W91709; ELAV (embry... 48.5 3e-05 ath:AT4G19610 RNA binding / nucleic acid binding / nucleotide ... 48.5 4e-05 dre:30737 elavl4, elrd, wu:fc24h01, zHuD; ELAV (embryonic leth... 48.1 4e-05 dre:30065 hug, fb72d01, fk65g02, wu:fb72d01, wu:fk65g02, zHuG;... 48.1 4e-05 xla:386602 elavl4, HuD, elrD, elrD1, elrD2; ELAV (embryonic le... 48.1 4e-05 hsa:1996 ELAVL4, HUD, PNEM; ELAV (embryonic lethal, abnormal v... 48.1 4e-05 xla:446310 zcrb1, MGC82154; zinc finger CCHC-type and RNA bind... 48.1 5e-05 hsa:5935 RBM3, IS1-RNPL, RNPL; RNA binding motif (RNP1, RRM) p... 47.8 6e-05 hsa:1153 CIRBP, CIRP; cold inducible RNA binding protein; K131... 47.8 6e-05 ath:AT1G49600 ATRBP47A (Arabidopsis thaliana RNA-binding prote... 47.8 7e-05 dre:321860 rbmx, fc66e11, wu:fb37c07, wu:fc66e11; RNA binding ... 47.4 7e-05 hsa:1993 ELAVL2, HEL-N1, HELN1, HUB; ELAV (embryonic lethal, a... 47.4 7e-05 mmu:15569 Elavl2, Hub, mel-N1; ELAV (embryonic lethal, abnorma... 47.4 8e-05 ath:AT2G35410 33 kDa ribonucleoprotein, chloroplast, putative ... 47.4 9e-05 xla:397952 elavl2-b, elavl2, elrB, hel-n1, heln1, hub, xel-1; ... 47.0 9e-05 xla:394342 elavl2-a, Xel-1, el-1, elavl2, elrB, hel-n1, heln1,... 47.0 9e-05 hsa:9904 RBM19, DKFZp586F1023, KIAA0682; RNA binding motif pro... 47.0 9e-05 sce:YPL178W CBC2, CBP20, MUD13, SAE1; Cbc2p; K12883 nuclear ca... 47.0 9e-05 ath:AT4G20030 RNA recognition motif (RRM)-containing protein 47.0 9e-05 xla:379484 cirbp-b, MGC64461, Xcirp, cirbp, cirp, cirp2, xcirp... 47.0 1e-04 dre:431719 elavl2, zgc:91918; ELAV (embryonic lethal, abnormal... 47.0 1e-04 xla:399292 elavl1-a, Elavl1, MGC132161, Xel-1, elav1, elrA, hu... 47.0 1e-04 > tgo:TGME49_094670 eukaryotic translation initiation factor 3, putative ; K03248 translation initiation factor 3 subunit G Length=277 Score = 301 bits (770), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 163/278 (58%), Positives = 203/278 (73%), Gaps = 3/278 (1%) Query 55 MTTDRKWADFELEDDGDLGDLAPTPGGFETRPDSDGIKTVTNYLQNAKGETLKIVKRIKV 114 M +RKWADFEL+DD +LGDL T GFET+PD +G+KTVT Y Q +GETLK+ KRIKV Sbjct 1 MAAERKWADFELDDDYELGDLVNTATGFETKPDEEGVKTVTTYTQTLRGETLKVTKRIKV 60 Query 115 TRVVHRINKAVHERRNLPLFGIEAAEGSTG-KAFTVRSVEEIPLEISKETLLRAKFKEDE 173 R RINK V+ R+N+ FG++AA+G A TVRS EEI +E+ + + R +E+E Sbjct 61 IRKCQRINKDVYARKNIVPFGLDAADGDPSLSATTVRSHEEIIIEVPRSSKQRKFKEEEE 120 Query 174 DDEDIQFADLNPAKTSRDLRQKFLSLQNDYEPVDAG-EGDPLGSRLGVPGAKGLSRLRGG 232 +D+ DLNP+KTSRDLRQKF +L+ D E AG +GD K + R R Sbjct 121 EDDFY-MGDLNPSKTSRDLRQKFRALREDDEAGAAGGDGDEETGLRSAGAGKYIPRARRE 179 Query 233 GDALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAF 292 G+ LKD+E RRREE TIRVTNLSED K+EDL ELFG IGK++R++LAKHK+KK SKGFAF Sbjct 180 GETLKDVENRRREECTIRVTNLSEDVKDEDLTELFGKIGKIDRIYLAKHKEKKCSKGFAF 239 Query 293 ITYANRELAAQAIRKLNRHGYDNLLLNVEWARPNNRER 330 ITY RE A +AIR+LNRHGYDNLLLNVEWA+P+NR+R Sbjct 240 ITYQRREDAVRAIRQLNRHGYDNLLLNVEWAKPSNRDR 277 > bbo:BBOV_IV004370 23.m06488; translation initiation factor 3 subunit; K03248 translation initiation factor 3 subunit G Length=268 Score = 193 bits (490), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 120/279 (43%), Positives = 173/279 (62%), Gaps = 21/279 (7%) Query 55 MTTDRKWADFELEDDGDLGDL-APTPGGFETRPDSDGIKTVTNYLQNAKGETLKIVKRIK 113 M ++ KWAD E ++D D+ + + FET PDS GIK VT+Y +N +G+T+KI KRIK Sbjct 6 MISETKWADIEADEDYDVDGIDSHRLTAFETAPDSQGIKVVTSYTKNRQGQTVKITKRIK 65 Query 114 VTRVVHRINKAVHERRNLPLFGIEAAEGSTGKAFTVRSVEEIPLEISKETLLRAKFKEDE 173 +R+ RI+K R + +F ++ + T+ S EEI +E + + R E Sbjct 66 ESRIPRRIHKEAKARADGSIFKVDK---NMEAGITMASQEEILIE---QPVGRRSKVNVE 119 Query 174 DDEDIQFA--DLNPAKTSRDLRQKFLSLQNDYEPVDAGEGDPLGSRLGVPGAKGLSRLRG 231 D+ D+ +A D+N + +R+L+ KF SL++D + VD + + ++ P SR G Sbjct 120 DNLDLVYAPADINLTRATRELKMKFKSLRDDSDVVDMMDSKDMPAKYVPP-----SRKEG 174 Query 232 GGDALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFA 291 G + R +E T+RVTNLSED +E+DL ELF +G++ R +LAKHK+ + SKGFA Sbjct 175 G-------DRRNFDENTVRVTNLSEDVREKDLVELFSRVGRIHRAYLAKHKETQYSKGFA 227 Query 292 FITYANRELAAQAIRKLNRHGYDNLLLNVEWARPNNRER 330 FITYA R+ A AI KLNR GYDNLLLNVEWA+P NR+R Sbjct 228 FITYATRQDALNAINKLNRQGYDNLLLNVEWAKPPNRDR 266 > tpv:TP01_0314 eukaryotic translation initiation factor 3 subunit 4; K03248 translation initiation factor 3 subunit G Length=266 Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 119/274 (43%), Positives = 168/274 (61%), Gaps = 23/274 (8%) Query 55 MTTDRKWADFELEDDGDLGDL-APTPGGFETRPDSDGIKTVTNYLQNAKGETLKIVKRIK 113 ++++ KWAD E +DD D +L FE DS GIK++ +Y +N++G ++KI KR+K Sbjct 9 LSSETKWADIEADDDYDNENLNVQHLKEFEIATDSQGIKSLVSYSRNSRGHSVKITKRVK 68 Query 114 VTRVVHRINKAVHERRNLPLFGIEAAEGSTGKAFTVRSVEEIPLEISKETLLRAKFKEDE 173 RV RI+K+V ER+NL F + E TG +F S EEI +E+S+ + +D Sbjct 69 EIRVSKRIHKSVFERKNLVPFNL-TDENDTGSSFV--SNEEIIIELSRN---ERRLNQD- 121 Query 174 DDEDIQFA--DLNPAKTSRDLRQKFLSLQNDYEPVDAGEGDPLGSRLGVPGAKGLSRLRG 231 DD D+ ++ D N K SRDL+ KF SL+ + + E + VP SR G Sbjct 122 DDSDLIYSPVDANFLKLSRDLKLKFKSLKEEDNVPEEVEEEAPAKY--VPP----SRKEG 175 Query 232 GGDALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFA 291 G E R ++ TIR+TNLSED +E+DL ELFG +G++ R +LAK+K+ + KGFA Sbjct 176 G-------ERRSFDDNTIRITNLSEDIREKDLTELFGRVGRIHRAYLAKYKETQNPKGFA 228 Query 292 FITYANRELAAQAIRKLNRHGYDNLLLNVEWARP 325 F+TY N+E A +AI K NR GY+NLLLNVEWARP Sbjct 229 FVTYVNKEDAREAINKFNRWGYNNLLLNVEWARP 262 > pfa:MAL8P1.83 eukaryotictranslation initiation factor, putative; K03248 translation initiation factor 3 subunit G Length=266 Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 156/292 (53%), Gaps = 45/292 (15%) Query 55 MTTDRKWADFELEDDGDLGDLAPTPGGFETRPDSD---------------GIKTVTNYLQ 99 + T++KWAD +++DD + D + D D GIK VT Y + Sbjct 2 IQTEKKWADIDVDDDESINDNEIKKKWEDIDADDDLEANKKLSYFTNYENGIKVVTKYSE 61 Query 100 NAKGETLKIVKRIKVTRVVHRINKAVHERRNLPLFGIEAAEGSTGKAFTVRSVE---EIP 156 N K +T + K+I+ + ++NK ++ R NL F I+ T + V ++E P Sbjct 62 NLKKQT--VTKKIQEVVIKKKLNKEINNRLNLKNFNIDIHSSVTVEPTDVVNIEVPKNNP 119 Query 157 LEISKETLLRAKFKEDEDDEDIQFADLNPAKTSRDLRQKFLSLQNDYEPVDAGEGDPLGS 216 L+ K+T + D FA+ KT++DL+ +F L+ D E D DP Sbjct 120 LDFLKDT-----------EYDYLFAE-QTNKTAKDLKNRFKILK-DEETEDVKAEDP--- 163 Query 217 RLGVPGAKGLSRLRGGGDALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERV 276 +K R G D + + E T+RVTNLSED E +L+ LFG +G + R+ Sbjct 164 ------SKAAGRREGLYYRPHDTQNK---ECTVRVTNLSEDVNENELSNLFGKVGNIVRM 214 Query 277 FLAKHKDKKASKGFAFITYANRELAAQAIRKLNRHGYDNLLLNVEWARPNNR 328 FLAKHK+ + SKGFAFITY+ RE A +AI KLNRHG++NLLL+VEWA+P+NR Sbjct 215 FLAKHKETQNSKGFAFITYSKREEAKRAIEKLNRHGFENLLLSVEWAKPSNR 266 > ath:AT3G11400 EIF3G1; eukaryotic translation initiation factor 3G / eIF3g; K03248 translation initiation factor 3 subunit G Length=321 Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 144/315 (45%), Gaps = 50/315 (15%) Query 56 TTDRKWADFELEDDGDLGDLAPTPGGFETRPDSDGIKTVTNYLQNAKGETLKIVKRIKVT 115 T+ +W E+++D DL L P PD +G+KT Y N + +KI R +V Sbjct 9 TSKFRWG--EMDEDEDLDFLLPPKQVIG--PDENGLKTTIEYKFNDEENKVKITTRTRVR 64 Query 116 RVVH-RINKAVHERRNLPLFGIEAAEGSTGKAFTVRSVEEIPLEISKE------TLLRAK 168 ++ R+NK ERRN P FG +AA G T+ S EEI LE + + A Sbjct 65 KLASARLNKRAMERRNWPKFG-DAANEEAGSHLTMVSTEEILLERPRAPGDQLANHMLAS 123 Query 169 FKEDEDDEDIQFADLNPAK------TSRDLRQ-----------KFLSLQNDY-------- 203 E E + F N K T L Q + + D+ Sbjct 124 IPEYELKCALTFVAANCTKADESKATGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYK 183 Query 204 ---EPVDAG-EGDPLGSRLGVPGAKGLSR-------LRGGGD--ALKDLEARRREEATIR 250 P D + P G + A G + +R G D A+ RR +E ++R Sbjct 184 DLAAPTDVFIDKPPTGESSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVR 243 Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 VTNLSED +E DL ELF G + RV++A + S+GF F+ + +RE A +AI KLN Sbjct 244 VTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNG 303 Query 311 HGYDNLLLNVEWARP 325 +GYDNL+L VEWA P Sbjct 304 YGYDNLILRVEWATP 318 > dre:393974 eif3g, MGC56553, eif3s4, zgc:56553; eukaryotic translation initiation factor 3, subunit G; K03248 translation initiation factor 3 subunit G Length=293 Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 147/291 (50%), Gaps = 35/291 (12%) Query 61 WADFELEDDGDLGDLAPTPGGFETRPDSDGIKTVTNYLQNAKGETLKIVKRIKVTRVVHR 120 WAD ++E++GD G L P+P ET IKTVT Y + G+ KI++ K+ + Sbjct 13 WAD-QVEEEGDEGSL-PSPK--ETV--KGNIKTVTEYKIDDDGQKFKIIRTFKIE--TRK 64 Query 121 INKAVHERRNLPLFGIEAAEGSTGKAFTVRSVEEIPLE-ISKETLLRAKFKEDEDDEDI- 178 +KAV R+N FG + T +++ + IS + L A +D+D++ + Sbjct 65 ASKAVARRKNWKKFGNSEYDAPGPNVATTTVSDDVFMTFISSKEDLNA---QDQDEDPMN 121 Query 179 ----------------QFADLNPAKTSRDLRQKFLSLQ---NDYEPVDAGEGDPLGSRLG 219 + P K + QK L+ Q + E A E +P Sbjct 122 KLEGQKIVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKAAEPEPAQPVQN 181 Query 220 VPGAKGLSRLRGGGDAL-KDLEARRR--EEATIRVTNLSEDAKEEDLAELFGNIGKLERV 276 G LR GG + ++ RR + ATIRVTNLSED +E DL ELF G + R+ Sbjct 182 KTGKYVPPSLRDGGTRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRI 241 Query 277 FLAKHKDKKASKGFAFITYANRELAAQAIRKLNRHGYDNLLLNVEWARPNN 327 +LAK K+ SKGFA I++ RE AA+AI ++ GYD+L+LNVEWA+P+N Sbjct 242 YLAKDKNTGQSKGFALISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSN 292 > xla:446311 eif3s4, MGC83369, eIF3g-A, eif3s4-A; eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa; K03248 translation initiation factor 3 subunit G Length=308 Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 87/258 (33%), Positives = 130/258 (50%), Gaps = 24/258 (9%) Query 91 IKTVTNYLQNAKGETLKIVKRIKVTRVVHRINKAVHERRNLPLFGIEAAEGSTGKAFTVR 150 IKT+T Y N +T+KIV+ K+ V + +K V +R+N FG + T Sbjct 51 IKTITEYKLNDDDKTVKIVRTFKIETV--KASKVVAQRKNWKKFGNSEYDPPGPNVATTT 108 Query 151 SVEEIPLE-ISKETLLRAKFKEDEDDE-------------DIQFADLNPAKTSRDLRQKF 196 +++ + I+ + L + +ED ++ + P K + QK Sbjct 109 VSDDVLMTFITNKEDLNNQEEEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTLGPMQKE 168 Query 197 LSLQ-----NDYEPVDAGEGDPLGSRLGVPGAKGLSRLRGGGDAL-KDLEARRR--EEAT 248 L+ Q D E E +P + + G LR GG + ++ RR + AT Sbjct 169 LAEQLGLSTGDKEKAPGAEPEPAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNAT 228 Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 IRVTNLSED +E DL ELF G + R++LAK K SKGFAFI++ RE AA+AI + Sbjct 229 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGV 288 Query 309 NRHGYDNLLLNVEWARPN 326 + GYD+L+LNVEWA+P+ Sbjct 289 SGFGYDHLILNVEWAKPS 306 > xla:447749 eIF3g-B, eif3s4-B; MGC83338 protein; K03248 translation initiation factor 3 subunit G Length=308 Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 33/297 (11%) Query 61 WADFELEDDGDLGDLAPT-----PGGF---ETRPDSDG-IKTVTNYLQNAKGETLKIVKR 111 WAD E+ D+ L+P P F R +G IKT+T Y N K + +KIV+ Sbjct 12 WADQVEEEGIDVEPLSPQIKKQDPASFVLDTPREVINGNIKTITEYKLNDKDKKIKIVRT 71 Query 112 IKVTRVVHRINKAVHERRNLPLFGIEAAEGSTGKAFTVRSVEEIPLE-ISKETLLRAKFK 170 K+ + + +K V R+N FG + T +++ + I+ + L + + Sbjct 72 FKIETL--KASKVVAHRKNWKKFGNSEYDPPGPNVATTTVSDDVLMTFITNKEDLNNQEE 129 Query 171 EDEDDE-------------DIQFADLNPAKTSRDLRQKFLSLQ-----NDYEPVDAGEGD 212 ED ++ + P K + QK L+ Q D E E + Sbjct 130 EDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTADKEKAPGAEPE 189 Query 213 PLGSRLGVPGAKGLSRLRGGGDAL-KDLEARRR--EEATIRVTNLSEDAKEEDLAELFGN 269 P + + G LR GG + ++ RR + ATIRVTNLSED +E DL ELF Sbjct 190 PAQAPVSKTGKYVPPSLRDGGSRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRP 249 Query 270 IGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNRHGYDNLLLNVEWARPN 326 G + R++LAK K SKGFAFI++ RE AA+AI ++ GYD+L+LNVEWA+P+ Sbjct 250 FGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPS 306 > cpv:cgd4_1030 eukaryotic translation initiation factor ; K03248 translation initiation factor 3 subunit G Length=352 Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 1/88 (1%) Query 238 DLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASK-GFAFITYA 296 +L++ R++ T+RV NLSEDA EEDL ELF G++ +VFLAK+K+ + GFAFITY+ Sbjct 261 NLQSSHRDDCTVRVANLSEDATEEDLQELFKTAGRVVKVFLAKNKNNSKNTKGFAFITYS 320 Query 297 NRELAAQAIRKLNRHGYDNLLLNVEWAR 324 RE A AIRKLNRHGYDNLLLNVEWA+ Sbjct 321 KREEAQNAIRKLNRHGYDNLLLNVEWAK 348 Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 13/127 (10%) Query 61 WADFELEDDGDLGDLAPT----PGGFETRPDSDGIKTVTNYLQNAKGETLKIVKRIKVTR 116 WAD D+ D P+ GFE++PD DGIK V +Y++++KG T+KI K+IK R Sbjct 13 WAD------EDIDDFEPSFDEPLKGFESKPDKDGIKHVISYIKDSKGSTIKITKKIKEVR 66 Query 117 VVHRINKAVHERRNLPLFGIEAAEGSTGKAFTVRSVEEIPLEISKETLLRAKFKEDEDDE 176 + +INK V RR + A+ + +EI ++I K T F++ ++D+ Sbjct 67 NIIKINKNVVNRR--LIMERNLADRFNSDTDVPKLGDEISIDIPKNT-DSMNFQDKDNDD 123 Query 177 DIQFADL 183 D F DL Sbjct 124 DYYFMDL 130 > ath:AT5G06000 EIF3G2; EIF3G2; RNA binding / translation initiation factor; K03248 translation initiation factor 3 subunit G Length=308 Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 139/289 (48%), Gaps = 34/289 (11%) Query 60 KWADFELEDDGDLGDLAPTPGGFETRPDSDGIKTVTNYLQNAKGETLKIVKRIKVTRVVH 119 +W + + E++GD L P PD +G+K V Y N + + +KI TRV Sbjct 13 RWGEID-EEEGDYDFLLPPKQMIS--PDQNGVKKVIEYKFNEEDKKVKITT---TTRVQK 66 Query 120 R-INKAVHERRNLPLFGIEAAEGSTGKAFTVRSVEEIPLEISKETLLRAKFKEDEDDEDI 178 R + K ERR+ FG +AA + T+RS E+I LE + A+ D Sbjct 67 RALTKQAVERRSWNKFG-DAAHEESSSYLTMRSTEDIILERIRAPGSNAEQSTVSGDSMS 125 Query 179 QF----ADLNPAK---------TSRDLRQKFLSLQNDYEPVDAGEGDPLGSRLG----VP 221 Q A L + TSR ++ LSL + EP+ A + G VP Sbjct 126 QLGKPGAVLMVCRLCQKKGDHWTSRCPQKDLLSLMD--EPLTAETSTSTITGTGRAAYVP 183 Query 222 GA--KGLSRLRGGGDALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLA 279 + +G R GG D R +E ++RVTNLSED + DL ELF G + R +A Sbjct 184 PSMREGADRKAGGSDMRS-----RHDENSVRVTNLSEDTRGPDLMELFRPFGAVTRCHVA 238 Query 280 KHKDKKASKGFAFITYANRELAAQAIRKLNRHGYDNLLLNVEWARPNNR 328 + S+GF F+++ +RE A +AI KLN +GYDNL+L VEW+ P + Sbjct 239 IDQKTSMSRGFGFVSFVSREDAQRAINKLNGYGYDNLILRVEWSTPKTQ 287 > hsa:8666 EIF3G, EIF3-P42, EIF3S4, eIF3-delta, eIF3-p44; eukaryotic translation initiation factor 3, subunit G; K03248 translation initiation factor 3 subunit G Length=320 Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 126/260 (48%), Gaps = 29/260 (11%) Query 91 IKTVTNYLQNAKGETLKIVKRIKVTRVVHRINKAVHERRNLPLFGIEAAE--GSTGKAFT 148 IKTVT Y + G+ KIV+ ++ + +KAV R+N FG + G T Sbjct 64 IKTVTEYKIDEDGKKFKIVRTFRIE--TRKASKAVARRKNWKKFGNSEFDPPGPNVATTT 121 Query 149 VRSVEEIPLEISKETLLRAKFKEDEDDEDI---------------QFADLNPAKTSRDLR 193 V + SKE L +E+ED + + P K + Sbjct 122 VSDDVSMTFITSKEDL---NCQEEEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTLGPM 178 Query 194 QKFLSLQNDYEPVD----AGEGDPLGSRLGVPGAKGLSRLRGGGDAL-KDLEARRR--EE 246 QK L+ Q + GE +P+ + G LR G + ++ RR + Sbjct 179 QKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRADDN 238 Query 247 ATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIR 306 ATIRVTNLSED +E DL ELF G + R++LAK K SKGFAFI++ RE AA+AI Sbjct 239 ATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIA 298 Query 307 KLNRHGYDNLLLNVEWARPN 326 ++ GYD+L+LNVEWA+P+ Sbjct 299 GVSGFGYDHLILNVEWAKPS 318 > mmu:53356 Eif3g, 44kDa, D0Jmb4, Eif3s4, TU-189B2, eIF3-p44, p44; eukaryotic translation initiation factor 3, subunit G; K03248 translation initiation factor 3 subunit G Length=320 Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 131/271 (48%), Gaps = 51/271 (18%) Query 91 IKTVTNYLQNAKGETLKIVKRIKVTRVVHRINKAVHERRNLPLFGIEAAE--GSTGKAFT 148 IKTVT Y G+ KIV+ ++ + +KAV R+N FG + G T Sbjct 64 IKTVTEYKIEEDGKKFKIVRTFRIE--TRKASKAVARRKNWKKFGNSEFDPPGPNVATTT 121 Query 149 VRSVEEIPLEISKETLLRAKFKEDEDDEDI---------------QFADLNPAKTSRDLR 193 V + SKE L +E+ED + + P K + Sbjct 122 VSDDVSMTFITSKEDL---NCQEEEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTLGPM 178 Query 194 QKFLS------------LQNDYEPVDAGEGDPLGSRLG--VPGA--KGLSRLRGGGDALK 237 QK L+ L + EPV A + S+ G VP + G SR RG + Sbjct 179 QKELAEQLGLSTGEKEKLPGELEPVQAAQ-----SKTGKYVPPSLRDGASR-RG-----E 227 Query 238 DLEARRR--EEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITY 295 ++ RR + ATIRVTNLSED +E DL ELF G + R++LAK K SKGFAFI++ Sbjct 228 SMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287 Query 296 ANRELAAQAIRKLNRHGYDNLLLNVEWARPN 326 RE AA+AI ++ GYD+L+LNVEWA+P+ Sbjct 288 HRREDAARAIAGVSGFGYDHLILNVEWAKPS 318 > cel:F22B5.2 eif-3.G; Eukaryotic Initiation Factor family member (eif-3.G); K03248 translation initiation factor 3 subunit G Length=256 Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 25/248 (10%) Query 88 SDGIKTVTNYLQNAKGETLKIVKRIKVTRVVHRINKAVHERRNLPLFGIEAAEGSTGKAF 147 +DG +T T + + G K+V + KV + R+ K V +R+ FG E + + Sbjct 26 ADGTRTETAFTE-VDGVRWKVVTQFKV--INKRVPKVVADRKKWVKFGSCKGEPAGPQVA 82 Query 148 TVRSVEEIPLEISKETLLRAKFKEDEDDEDIQFADLNPAKTSRDLR-QKFLSLQNDY--- 203 T EE+ ++ ++ RA + + ED Q A + R + S Y Sbjct 83 TTYVAEEVDMQFTRN---RAGEQILDVQEDKQTAKTTSREHCRHCKGNDHWSTHCPYKVM 139 Query 204 ----EPVDAGEGDPLGSRLGVPGAKGLSRLRGGGDALKDLEARRREEATIRVTNLSEDAK 259 E DA + D R+ + +R G + ++ R +E T RVTNL ++ Sbjct 140 YQLDEEADA-DKDTEKDRMAMG-------MRPDG---RQIDRNRSDENTCRVTNLPQEMN 188 Query 260 EEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNRHGYDNLLLN 319 E++L +LFG IG++ R+F+A+ K KGFAF+T+ +R+ AA+AI +LN +++L Sbjct 189 EDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELNDIRMYHMVLK 248 Query 320 VEWARPNN 327 VEW RP+N Sbjct 249 VEWTRPSN 256 > sce:YDR429C TIF35; Tif35p; K03248 translation initiation factor 3 subunit G Length=274 Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 44/288 (15%) Query 72 LGDLAPTPGGFETRPDSDGIKTVTNYLQNAKGETLKIVKRIKVTRVVHRINKAVHERRNL 131 + ++AP E ++DG +++ Y + G KI +++K +V+ +++K+V ER+N Sbjct 1 MSEVAPE----EIIENADGSRSIITY-KIEDGVKYKITQKVKEVKVLEKVHKSVAERKNW 55 Query 132 PLFGIEAAEGSTGKAFTVRSVEEIPLEISKETLLRAKFKEDEDDEDIQFADLNPAKTSRD 191 +G E + A T R EE+ L +S+ +K+ E+ E IQ + KT Sbjct 56 HKYGSEKGSPAGPSAVTARLGEEVELRLSR------NWKQAEE-ERIQKEKASLTKTGLQ 108 Query 192 LR-------------QKFLSLQNDYEPVDAGEGD----------PLGSRLGVPGAKGLSR 228 R + LS + E EG +G +PG Sbjct 109 CRLCGNDHMTMNCPFKTILSELSALEDPATNEGGVEAASEEKAGQVGGAGSIPGQYVPPS 168 Query 229 LRGGG-----DALKDLEARRREE-ATIRVTNLSEDAKEEDL-AELFGNIGKLERVFLAKH 281 R G DA +D +R R++ T+++ ++E+A E L EL + RV + ++ Sbjct 169 RRAGARDPSSDAYRD--SRERDDMCTLKIMQVNENADENSLREELLFPFAPIPRVSVVRN 226 Query 282 KDKKASKGFAFITYANRELAAQAIRKLNRHGYDNLLLNVEWARPNNRE 329 K+ S+G AF+T+++ E+A QA+R L+ GY NL+L VEW++P +E Sbjct 227 KETGKSRGLAFVTFSSEEVAEQALRFLDGRGYMNLILRVEWSKPKVKE 274 > cel:F26A3.2 ncbp-2; Nuclear Cap-Binding Protein family member (ncbp-2); K12883 nuclear cap-binding protein subunit 2 Length=154 Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 0/88 (0%) Query 235 ALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFIT 294 ++D E R T+ V NLS KE+ + ELFG G + RV + + KK GF F+ Sbjct 25 TVRDQETALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVE 84 Query 295 YANRELAAQAIRKLNRHGYDNLLLNVEW 322 Y RE A A++ ++ D+ ++ +W Sbjct 85 YYTREDAELALQNISNTRMDDRVIRADW 112 > xla:100380998 ncbp2; nuclear cap binding protein subunit 2, 20kDa; K12883 nuclear cap-binding protein subunit 2 Length=153 Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 0/85 (0%) Query 238 DLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYAN 297 D E+ ++ T+ V NLS EE + ELF G ++R+ + K KK + GF F+ Y Sbjct 28 DQESLLKQSCTLYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKVKKTACGFCFVEYYT 87 Query 298 RELAAQAIRKLNRHGYDNLLLNVEW 322 R A QA+R +N D+ ++ +W Sbjct 88 RADAEQAMRFINGTRLDDRIVRTDW 112 > ath:AT2G44710 RNA recognition motif (RRM)-containing protein Length=809 Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 0/69 (0%) Query 240 EARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRE 299 E R+R+E I V +L + A EEDL ++FG++G++ V + K+ K SKG AF+ +A E Sbjct 207 ERRKRKEFEIFVGSLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATVE 266 Query 300 LAAQAIRKL 308 A +A+++L Sbjct 267 QAKRAVKEL 275 Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Query 248 TIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRK 307 TI + L EE + +L GKLE+V LA++ K F F+T+ E A + Sbjct 392 TIFIDGLLPSWNEERVRDLLKPYGKLEKVELARNMPSARRKDFGFVTFDTHEAAVSCAKF 451 Query 308 LNR----HGYDNLLLNVEWARP 325 +N G D + +RP Sbjct 452 INNSELGEGEDKAKVRARLSRP 473 > ath:AT4G34110 PAB2; PAB2 (POLY(A) BINDING 2); RNA binding / translation initiation factor; K13126 polyadenylate-binding protein Length=629 Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 1/79 (1%) Query 237 KDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYA 296 +D A + + + V NL+E ++DL FG GK+ + K + K SKGF F+ + Sbjct 205 RDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGK-SKGFGFVNFE 263 Query 297 NRELAAQAIRKLNRHGYDN 315 N + AA+A+ LN H +D+ Sbjct 264 NADDAARAVESLNGHKFDD 282 Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Query 237 KDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYA 296 +D RR I + NL E + L + F + G + +A + SKG+ F+ YA Sbjct 114 RDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQ-SKGYGFVQYA 172 Query 297 NRELAAQAIRKLNRHGYDNLLLN 319 N E A +AI KLN +LLN Sbjct 173 NEESAQKAIEKLN-----GMLLN 190 > ath:AT2G21440 RNA recognition motif (RRM)-containing protein; K14573 nucleolar protein 4 Length=1003 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 0/77 (0%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 + NL AK D+ +F +G + VF+ K+ + KGFAF+ + ++ AA AI+K N Sbjct 335 IRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLPKGFAFVKFTCKKDAANAIKKFNG 394 Query 311 HGYDNLLLNVEWARPNN 327 H + + V+WA P N Sbjct 395 HMFGKRPIAVDWAVPKN 411 Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Query 247 ATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIR 306 AT+ V+ L L E F +G + R FL +K +GFAF+ +A +E +AI Sbjct 20 ATVCVSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKGSDEHRGFAFVKFALQEDVNRAIE 79 Query 307 KLNRHGYDNLLLNVEWA--RPNNRER 330 N + V+ A RP+ +ER Sbjct 80 LKNGSTVGGRRITVKQAAHRPSLQER 105 Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 0/60 (0%) Query 246 EATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAI 305 E T+ + NL D +E++ + F G++E + L HK K +G AF+ + + + AI Sbjct 560 ERTLFIRNLPFDVTKEEVKQRFTVFGEVESLSLVLHKVTKRPEGTAFVKFKTADASVAAI 619 > mmu:68092 Ncbp2, 20kDa, 5930413E18Rik, AA536802, AI843301, C79367; nuclear cap binding protein subunit 2; K12883 nuclear cap-binding protein subunit 2 Length=156 Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 0/79 (0%) Query 244 REEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQ 303 ++ T+ V NLS EE + ELF G ++++ + K KK + GF F+ Y +R A Sbjct 37 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAEN 96 Query 304 AIRKLNRHGYDNLLLNVEW 322 A+R +N D+ ++ +W Sbjct 97 AMRYINGTRLDDRIIRTDW 115 > ath:AT4G24770 RBP31; RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding Length=329 Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 0/81 (0%) Query 245 EEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQA 304 EEA + V NL+ D + LA LF G +E + +++ S+GF F+T ++ + A A Sbjct 148 EEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETA 207 Query 305 IRKLNRHGYDNLLLNVEWARP 325 + K NR+ + LL V A P Sbjct 208 VEKFNRYDLNGRLLTVNKAAP 228 Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 + V NL D L +LF GK+ + ++ S+GF F+T ++ + +AI L Sbjct 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305 Query 309 NRHGYDN--LLLNVEWARPNNR 328 + + + +NV RP R Sbjct 306 DGQNLEGRAIRVNVAEERPPRR 327 > dre:192325 ncbp2, CHUNP6917, zgc:92592; nuclear cap binding protein subunit 2; K12883 nuclear cap-binding protein subunit 2 Length=155 Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 0/79 (0%) Query 244 REEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQ 303 ++ AT+ V NLS EE + LF G ++R+ + K KK + GF F+ Y R A Sbjct 36 KQSATLYVGNLSFYTTEEQVHVLFAKCGDVKRIIIGLDKIKKTACGFCFVEYYTRADAEN 95 Query 304 AIRKLNRHGYDNLLLNVEW 322 A+R +N D+ ++ +W Sbjct 96 AMRFVNGTRLDDRIIRTDW 114 > ath:AT3G10400 RNA recognition motif (RRM)-containing protein; K13154 U11/U12 small nuclear ribonucleoprotein 31 kDa protein Length=261 Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 0/83 (0%) Query 246 EATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAI 305 ++T+ V+NL D+ LF GK+ RV + K + + S+G AF+ Y +RE AA+A Sbjct 56 KSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAA 115 Query 306 RKLNRHGYDNLLLNVEWARPNNR 328 R ++ + L V A N R Sbjct 116 RSMDAKILNGRKLTVSIAADNGR 138 > ath:AT3G52660 RNA recognition motif (RRM)-containing protein Length=471 Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 0/61 (0%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 + + + DA E DL G+IG++ V + + KD KG+AF+T+ +++LAA+AI L Sbjct 94 VYLGGIPTDATEGDLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTL 153 Query 309 N 309 N Sbjct 154 N 154 Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 0/78 (0%) Query 248 TIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRK 307 + + NL D +E L LF + GK+ +V + K K + F+ YA R +A++ Sbjct 269 ALYIKNLPRDITQERLKALFEHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKN 328 Query 308 LNRHGYDNLLLNVEWARP 325 R+ D +L+ A+P Sbjct 329 TERYEIDGHMLDCTLAKP 346 > hsa:1994 ELAVL1, ELAV1, HUR, Hua, MelG; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R); K13088 ELAV-like protein 1 Length=326 Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 8/107 (7%) Query 216 SRLGVPGAKGLSRLRGGGDALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLER 275 S +GV GLS + G+A I + NL +DA E L ++FG G + Sbjct 221 SPMGVDHMSGLSGVNVPGNASSGW--------CIFIYNLGQDADEGILWQMFGPFGAVTN 272 Query 276 VFLAKHKDKKASKGFAFITYANRELAAQAIRKLNRHGYDNLLLNVEW 322 V + + + KGF F+T N E AA AI LN + + +L V + Sbjct 273 VKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 319 Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 0/67 (0%) Query 245 EEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQA 304 ++A + ++ L ++D+ ++F G++ + + S+G AFI + R A +A Sbjct 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163 Query 305 IRKLNRH 311 I N H Sbjct 164 ITSFNGH 170 > mmu:19652 Rbm3, 2600016C11Rik, MGC118410; RNA binding motif protein 3; K13186 RNA-binding protein 3 Length=154 Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 0/79 (0%) Query 245 EEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQA 304 EE + V L+ + E+ L + F + G + V + K ++ + S+GF FIT+ N E A+ A Sbjct 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63 Query 305 IRKLNRHGYDNLLLNVEWA 323 +R +N D + V+ A Sbjct 64 MRAMNGESLDGRQIRVDHA 82 > mmu:100043257 Gm15453, OTTMUSG00000022091; predicted gene 15453 Length=154 Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 0/79 (0%) Query 245 EEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQA 304 EE + V L+ + E+ L + F + G + V + K ++ + S+GF FIT+ N E A+ A Sbjct 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63 Query 305 IRKLNRHGYDNLLLNVEWA 323 +R +N D + V+ A Sbjct 64 MRAMNGESLDGRQIRVDHA 82 > mmu:15572 Elavl4, Elav, Hud, PNEM; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); K13208 ELAV like protein 2/3/4 Length=380 Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 0/74 (0%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 I V NLS D+ E L +LFG G + V + + + KGF F+T N + AA AI L Sbjct 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358 Query 309 NRHGYDNLLLNVEW 322 N + + +L V + Sbjct 359 NGYRLGDRVLQVSF 372 Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 0/77 (0%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 V L ++ +E+ LFG+IG++E L + K S G+ F+ Y + + A +AI LN Sbjct 50 VNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 109 Query 311 HGYDNLLLNVEWARPNN 327 + V +ARP++ Sbjct 110 LRLQTKTIKVSYARPSS 126 > mmu:15568 Elavl1, 2410055N02Rik, HUR, Hua, W91709; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R); K13088 ELAV-like protein 1 Length=326 Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 8/107 (7%) Query 216 SRLGVPGAKGLSRLRGGGDALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLER 275 S +GV G+S + G+A I + NL +DA E L ++FG G + Sbjct 221 SPMGVDHMSGISGVNVPGNASSGW--------CIFIYNLGQDADEGILWQMFGPFGAVTN 272 Query 276 VFLAKHKDKKASKGFAFITYANRELAAQAIRKLNRHGYDNLLLNVEW 322 V + + + KGF F+T N E AA AI LN + + +L V + Sbjct 273 VKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 319 Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 0/77 (0%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 V L ++ +E+L LF +IG++E L + K S G+ F+ Y + A +AI LN Sbjct 24 VNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNG 83 Query 311 HGYDNLLLNVEWARPNN 327 + + V +ARP++ Sbjct 84 LRLQSKTIKVSYARPSS 100 Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 0/67 (0%) Query 245 EEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQA 304 ++A + ++ L ++D+ ++F G++ + + S+G AFI + R A +A Sbjct 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163 Query 305 IRKLNRH 311 I N H Sbjct 164 ITSFNGH 170 > ath:AT4G19610 RNA binding / nucleic acid binding / nucleotide binding; K14787 multiple RNA-binding domain-containing protein 1 Length=816 Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 0/70 (0%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 V NL A EE+L E F GK+ V L K+ K S+G A+I Y E AA+A+ +L+ Sbjct 298 VRNLPYTATEEELMEHFSTFGKISEVHLVLDKETKRSRGIAYILYLIPECAARAMEELDN 357 Query 311 HGYDNLLLNV 320 + LL++ Sbjct 358 SSFQGRLLHI 367 Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 + V N++ +A + +L +LF G+++ + L K K+ G+AF+ + ++ A A + L Sbjct 704 LHVKNIAFEATKRELRQLFSPFGQIKSMRLPK-KNIGQYAGYAFVEFVTKQEALNAKKAL 762 Query 309 NRHGYDNLLLNVEWARPNN 327 + L +EWA +N Sbjct 763 ASTHFYGRHLVLEWANDDN 781 Score = 34.3 bits (77), Expect = 0.73, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 I V NL + KE+ L + F G++ L + D K S+ F FI + + + A QAI+ Sbjct 4 ICVKNLPKHVKEDQLRDHFSQKGEITDAKLMRSNDGK-SRQFGFIGFRSAQEAQQAIKYF 62 Query 309 NRHGYDNLLLNVEWA 323 N L+ VE A Sbjct 63 NNTYLGTSLIIVEIA 77 > dre:30737 elavl4, elrd, wu:fc24h01, zHuD; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); K13208 ELAV like protein 2/3/4 Length=367 Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 0/74 (0%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 I V NLS D+ E L +LFG G + V + + + KGF F+T N + AA AI L Sbjct 286 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 345 Query 309 NRHGYDNLLLNVEW 322 N + + +L V + Sbjct 346 NGYRLGDRVLQVSF 359 Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 0/77 (0%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 V L ++ +E+ LFG+IG++E L + K S G+ F+ Y + + A +AI LN Sbjct 48 VNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 107 Query 311 HGYDNLLLNVEWARPNN 327 + V +ARP++ Sbjct 108 LRLQTKTIKVSYARPSS 124 > dre:30065 hug, fb72d01, fk65g02, wu:fb72d01, wu:fk65g02, zHuG; HuG; K13208 ELAV like protein 2/3/4 Length=322 Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 0/74 (0%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 I V NL +DA E L ++FG G + V + + + KGF F+T N E AA AI L Sbjct 242 IFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAISSL 301 Query 309 NRHGYDNLLLNVEW 322 N + + +L V + Sbjct 302 NGYRLGDKVLQVSF 315 Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 0/77 (0%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 + L ++ +E+L LF +IG++E L + K S G+ F+ Y N A +AI LN Sbjct 22 INYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGHSLGYGFVNYVNPSDAERAINTLNG 81 Query 311 HGYDNLLLNVEWARPNN 327 + + V +ARP++ Sbjct 82 LRLQSKTIKVSYARPSS 98 Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 8/84 (9%) Query 226 LSRLRGGGDALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKK 285 +S R D +KD A + ++ L + ++++ ++F G++ + + Sbjct 91 VSYARPSSDGIKD--------ANLYISGLPKTMTQKNVEDMFTQYGRIINSRILVDQASG 142 Query 286 ASKGFAFITYANRELAAQAIRKLN 309 S+G AFI + R A +AI+ LN Sbjct 143 LSRGVAFIRFDKRSEAEEAIKDLN 166 > xla:386602 elavl4, HuD, elrD, elrD1, elrD2; ELAV (embryonic lethal, abnormal vision)-like 4 (Hu antigen D); K13208 ELAV like protein 2/3/4 Length=400 Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 0/74 (0%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 I V NLS D+ E L +LFG G + V + + + KGF F+T N + AA AI L Sbjct 319 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 378 Query 309 NRHGYDNLLLNVEW 322 N + + +L V + Sbjct 379 NGYRLGDRVLQVSF 392 > hsa:1996 ELAVL4, HUD, PNEM; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); K13208 ELAV like protein 2/3/4 Length=366 Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 0/74 (0%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 I V NLS D+ E L +LFG G + V + + + KGF F+T N + AA AI L Sbjct 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344 Query 309 NRHGYDNLLLNVEW 322 N + + +L V + Sbjct 345 NGYRLGDRVLQVSF 358 Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 0/77 (0%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 V L ++ +E+ LFG+IG++E L + K S G+ F+ Y + + A +AI LN Sbjct 50 VNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 109 Query 311 HGYDNLLLNVEWARPNN 327 + V +ARP++ Sbjct 110 LRLQTKTIKVSYARPSS 126 > xla:446310 zcrb1, MGC82154; zinc finger CCHC-type and RNA binding motif 1; K13154 U11/U12 small nuclear ribonucleoprotein 31 kDa protein Length=218 Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 0/83 (0%) Query 246 EATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAI 305 ++T+ V+NL DL +F GK+ +V + K KD + SKG +F+ + ++E A + Sbjct 9 KSTVYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRKSKGVSFVLFLDKESAQNCV 68 Query 306 RKLNRHGYDNLLLNVEWARPNNR 328 R LN + A+ N R Sbjct 69 RGLNNKQLFGRAIKASIAKDNGR 91 > hsa:5935 RBM3, IS1-RNPL, RNPL; RNA binding motif (RNP1, RRM) protein 3; K13186 RNA-binding protein 3 Length=157 Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 0/79 (0%) Query 245 EEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQA 304 EE + V L+ + E+ L + F + G + V + K ++ + S+GF FIT+ N E A+ A Sbjct 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63 Query 305 IRKLNRHGYDNLLLNVEWA 323 +R +N D + V+ A Sbjct 64 MRAMNGESLDGRQIRVDHA 82 > hsa:1153 CIRBP, CIRP; cold inducible RNA binding protein; K13195 cold-inducible RNA-binding protein Length=172 Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Query 245 EEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQA 304 +E + V LS D E+ L ++F G++ V + K ++ + S+GF F+T+ N + A A Sbjct 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63 Query 305 IRKLNRHGYDNLLLNVEWA--RPNNRER 330 + +N D + V+ A +NR R Sbjct 64 MMAMNGKSVDGRQIRVDQAGKSSDNRSR 91 > ath:AT1G49600 ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a); RNA binding Length=445 Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query 226 LSRLRGGGDALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKK 285 L+ GG ++ D E+ +TI V L D EEDL + F + G++ V + Sbjct 309 LAGGHGGNGSMSDGESNN---STIFVGGLDADVTEEDLMQPFSDFGEVVSVKI------P 359 Query 286 ASKGFAFITYANRELAAQAIRKLNRHGYDNLLLNVEWARPNNRE 329 KG F+ +ANR+ A +AI LN + + W R N++ Sbjct 360 VGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQ 403 > dre:321860 rbmx, fc66e11, wu:fb37c07, wu:fc66e11; RNA binding motif protein, X-linked; K12885 heterogeneous nuclear ribonucleoprotein G Length=379 Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 0/73 (0%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 + L+ + E+ L F G++ V L K ++ S+GFAF+TY N A A R++N Sbjct 12 IGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAAREMNG 71 Query 311 HGYDNLLLNVEWA 323 D + VE A Sbjct 72 KPLDGKPIKVEQA 84 > hsa:1993 ELAVL2, HEL-N1, HELN1, HUB; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B); K13208 ELAV like protein 2/3/4 Length=346 Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 0/77 (0%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 V L ++ +E+L LFG+IG++E L + K S G+ F+ Y + + A +AI LN Sbjct 43 VNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 102 Query 311 HGYDNLLLNVEWARPNN 327 + V +ARP++ Sbjct 103 LRLQTKTIKVSYARPSS 119 Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 0/74 (0%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 I V NL+ DA E L ++FG G + V + + + KGF F+T N + AA AI L Sbjct 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 324 Query 309 NRHGYDNLLLNVEW 322 N + + +L V + Sbjct 325 NGYRLGDRVLQVSF 338 > mmu:15569 Elavl2, Hub, mel-N1; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B); K13208 ELAV like protein 2/3/4 Length=359 Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 0/77 (0%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 V L ++ +E+L LFG+IG++E L + K S G+ F+ Y + + A +AI LN Sbjct 43 VNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 102 Query 311 HGYDNLLLNVEWARPNN 327 + V +ARP++ Sbjct 103 LRLQTKTIKVSYARPSS 119 Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 0/74 (0%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 I V NL+ DA E L ++FG G + V + + + KGF F+T N + AA AI L Sbjct 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query 309 NRHGYDNLLLNVEW 322 N + + +L V + Sbjct 338 NGYRLGDRVLQVSF 351 > ath:AT2G35410 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative Length=308 Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 V NL D++ELFG G + V + + KD K ++GFAF+T A+ E A AI K + Sbjct 99 VFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGK-NRGFAFVTMASGEEAQAAIDKFDT 157 Query 311 HGYDNLLLNVEWAR 324 +++V +AR Sbjct 158 FQVSGRIISVSFAR 171 > xla:397952 elavl2-b, elavl2, elrB, hel-n1, heln1, hub, xel-1; ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B); K13208 ELAV like protein 2/3/4 Length=389 Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 0/74 (0%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 I V NL+ DA E L ++FG G + V + + + KGF F+T N + AA AI L Sbjct 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 367 Query 309 NRHGYDNLLLNVEW 322 N + + +L V + Sbjct 368 NGYRLGDRVLQVSF 381 Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKA-SKGFAFITYANRELAAQAIRKLN 309 V L ++ +E+L LFG+IG++E L + K + S G+ F+ Y + + A +AI +N Sbjct 70 VNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTVN 129 Query 310 RHGYDNLLLNVEWARPNN 327 + V +ARP++ Sbjct 130 GLRLQTKTIKVSYARPSS 147 > xla:394342 elavl2-a, Xel-1, el-1, elavl2, elrB, hel-n1, heln1, hub, p45; ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B); K13208 ELAV like protein 2/3/4 Length=389 Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 0/74 (0%) Query 249 IRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKL 308 I V NL+ DA E L ++FG G + V + + + KGF F+T N + AA AI L Sbjct 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 367 Query 309 NRHGYDNLLLNVEW 322 N + + +L V + Sbjct 368 NGYRLGDRVLQVSF 381 Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKA-SKGFAFITYANRELAAQAIRKLN 309 V L ++ +E+L LFG+IG++E L + K + S G+ F+ Y + + A +AI LN Sbjct 70 VNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTLN 129 Query 310 RHGYDNLLLNVEWARPNN 327 + V +ARP++ Sbjct 130 GLRLQTKTIKVSYARPSS 147 > hsa:9904 RBM19, DKFZp586F1023, KIAA0682; RNA binding motif protein 19; K14787 multiple RNA-binding domain-containing protein 1 Length=960 Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Query 247 ATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKA---SKGFAFITYANRELAAQ 303 T+ + NL+ D EE L E+F +G ++ ++K K+K S GF F+ Y E A + Sbjct 730 CTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQK 789 Query 304 AIRKLNRHGYDNLLLNV 320 A+++L H D L V Sbjct 790 ALKQLQGHVVDGHKLEV 806 Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 0/76 (0%) Query 245 EEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQA 304 E + V NL + EEDL +LF G L + K KGFAFIT+ E A +A Sbjct 400 ESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKA 459 Query 305 IRKLNRHGYDNLLLNV 320 +++ + +L+V Sbjct 460 YSEVDGQVFQGRMLHV 475 Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 V NL KEE +LF G L L KD K K F FI + + E A +A + N+ Sbjct 6 VKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRK-FGFIGFKSEEEAQKAQKHFNK 64 Query 311 HGYDNLLLNVEWAR 324 D + VE+ + Sbjct 65 SFIDTSRITVEFCK 78 Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query 242 RRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKAS-KGFAFITYANREL 300 R++ + I V N+ A ++ ELF G+L+ V L K + +GF F+ + ++ Sbjct 827 RKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQD 886 Query 301 AAQAIRKL--NRHGYDNLLLNVEWA 323 A +A L + H Y L+ +EWA Sbjct 887 AKRAFNALCHSTHLYGRRLV-LEWA 910 > sce:YPL178W CBC2, CBP20, MUD13, SAE1; Cbc2p; K12883 nuclear cap-binding protein subunit 2 Length=208 Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 1/105 (0%) Query 217 RLGVPGAKGLSRLRGGGDALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERV 276 RL P L + R + L++L + +TI V NLS EE + ELF G ++R+ Sbjct 17 RLDTPSRYLLRKARRNPNGLQELRESMKS-STIYVGNLSFYTSEEQIYELFSKCGTIKRI 75 Query 277 FLAKHKDKKASKGFAFITYANRELAAQAIRKLNRHGYDNLLLNVE 321 + + K GF FI Y+ + A A++ L+ D + ++ Sbjct 76 IMGLDRFKFTPCGFCFIIYSCPDEALNALKYLSDTKLDEKTITID 120 > ath:AT4G20030 RNA recognition motif (RRM)-containing protein Length=152 Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 0/83 (0%) Query 247 ATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIR 306 + I V NL E+ L F G++ V L K + K SKG+AFI + +++ A AI Sbjct 40 SKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIE 99 Query 307 KLNRHGYDNLLLNVEWARPNNRE 329 ++R Y+ ++ ++ A+P R+ Sbjct 100 TMDRRMYNGRMIYIDIAKPGKRD 122 > xla:379484 cirbp-b, MGC64461, Xcirp, cirbp, cirp, cirp2, xcirp2; cold inducible RNA binding protein; K13195 cold-inducible RNA-binding protein Length=166 Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 0/79 (0%) Query 245 EEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQA 304 +E + + L+ D EE L ++F G++ V + K ++ K S+GF F+T+ N + A A Sbjct 3 DEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDA 62 Query 305 IRKLNRHGYDNLLLNVEWA 323 + +N D + V+ A Sbjct 63 MMAMNGKAVDGRQIRVDQA 81 > dre:431719 elavl2, zgc:91918; ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B); K13208 ELAV like protein 2/3/4 Length=360 Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 0/77 (0%) Query 251 VTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRKLNR 310 V L ++ +E+L LFG+IG++E L + K S G+ F+ Y + A +AI LN Sbjct 43 VNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAEKAINTLNG 102 Query 311 HGYDNLLLNVEWARPNN 327 + V +ARP++ Sbjct 103 LRLQTKTIKVSYARPSS 119 Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 0/85 (0%) Query 238 DLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYAN 297 +L A I V NL+ DA E L ++FG G + V + + + KGF F+T N Sbjct 268 NLPAHAGTGWCIFVYNLAPDADENVLWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 327 Query 298 RELAAQAIRKLNRHGYDNLLLNVEW 322 + AA AI LN + + +L V + Sbjct 328 YDEAAVAIASLNGYRLGDRVLQVSF 352 > xla:399292 elavl1-a, Elavl1, MGC132161, Xel-1, elav1, elrA, hua, hur, melg, p36; ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R); K13208 ELAV like protein 2/3/4 Length=337 Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 0/75 (0%) Query 248 TIRVTNLSEDAKEEDLAELFGNIGKLERVFLAKHKDKKASKGFAFITYANRELAAQAIRK 307 I V NL +DA E L ++FG G + V + + + KGF F+T N E AA AI Sbjct 256 CIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIAS 315 Query 308 LNRHGYDNLLLNVEW 322 LN + + L V + Sbjct 316 LNGYRLGDKTLQVSF 330 Lambda K H 0.317 0.136 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 13775884780 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40