bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_3138_orf1 Length=170 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_021190 mRNA cleavage factor-like protein, putative ... 132 4e-31 pfa:PFA_0450c mRNA cleavage factor-like protein, putative; K14... 104 1e-22 cpv:cgd6_3810 NUDIX domain protein; mRNA cleavage factor-like ... 100 2e-21 tpv:TP04_0626 mRNA cleavage factor protein; K14397 cleavage an... 86.7 4e-17 bbo:BBOV_III007210 17.m07632; hypothetical protein; K14397 cle... 83.2 4e-16 ath:AT4G25550 protein binding; K14397 cleavage and polyadenyla... 74.7 2e-13 cel:F43G9.5 hypothetical protein; K14397 cleavage and polyaden... 69.7 4e-12 ath:AT4G29820 CFIM-25 64.7 1e-10 xla:444830 nudt21, MGC84447, cpsf5; nudix (nucleoside diphosph... 64.7 2e-10 dre:394092 cpsf5, MGC63966, zgc:63966; cleavage and polyadenyl... 64.3 2e-10 mmu:68219 Nudt21, 25kDa, 3110048P04Rik, 5730530J16Rik, AU01486... 64.3 2e-10 hsa:11051 NUDT21, CFIM25, CPSF5, DKFZp686H1588; nudix (nucleos... 64.3 2e-10 cel:ZC412.2 gcy-14; Guanylyl CYclase family member (gcy-14); K... 32.7 0.63 xla:100037166 nkcc1; Na-K-2Cl cotransporter 1; K10951 solute c... 31.6 1.3 xla:100137628 hypothetical protein LOC100137628 30.8 2.5 tgo:TGME49_047390 ATPase, AAA family domain-containing protein... 30.0 4.2 mmu:20983 Syt4, SytIV; synaptotagmin IV 29.6 5.6 dre:445153 im:7149072; si:ch211-175f11.2 28.9 8.0 mmu:20496 Slc12a2, 9330166H04Rik, Nkcc1, mBSC2, sy-ns; solute ... 28.9 8.8 > tgo:TGME49_021190 mRNA cleavage factor-like protein, putative ; K14397 cleavage and polyadenylation specificity factor subunit 5 Length=414 Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 74/167 (44%), Positives = 103/167 (61%), Gaps = 11/167 (6%) Query 8 TDGPDLEVGEFLGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCL 67 ++G EVGEFLGEWWR EFD++ P+LPPHVTRPKER+R++QVQLP +CSFR+P F L Sbjct 253 SEGVAAEVGEFLGEWWRVEFDEEPQPFLPPHVTRPKERIRLYQVQLPPKCSFRLPPAFSL 312 Query 68 TVVPIFE-LSPQRVGLAIGGLSHLIARFSIRLMVPTLDKYEADTSLEH----KGEAGLDD 122 +P+F+ L P+ G+A+ GL H+++RF RL+ P+LD + + +L + E ++ Sbjct 313 AALPLFDLLRPEIHGVALSGLPHVVSRFRFRLLSPSLDGFVSSANLRRPRGGQQEGDAEE 372 Query 123 LGTSFDIHELEEQPDVAGGHSEAKPALENDGELEMLPPELQHLAELE 169 L + + ELE G G E LPPEL LAE E Sbjct 373 LSGEY-LAELERMNTSQDGELS-----HIHGATEELPPELAALAEEE 413 > pfa:PFA_0450c mRNA cleavage factor-like protein, putative; K14397 cleavage and polyadenylation specificity factor subunit 5 Length=232 Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 44/92 (47%), Positives = 65/92 (70%), Gaps = 2/92 (2%) Query 13 LEVGEFLGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCLTVVPI 72 +E+G+FLGEWWR +F+ +PYLP H++RPKE +R++QV L +C F +P GF L +P+ Sbjct 140 VEIGDFLGEWWRTQFNSVFLPYLPAHISRPKEYIRLYQVILSPKCIFHLPPGFTLKAIPL 199 Query 73 FELSPQRVGLAIGGLSHLIARFSIRLMVPTLD 104 F+L+ GLAI GLS +++RF + MV D Sbjct 200 FDLN--NCGLAISGLSSILSRFKLHCMVQEQD 229 > cpv:cgd6_3810 NUDIX domain protein; mRNA cleavage factor-like protein Im like, plant+animal group ; K14397 cleavage and polyadenylation specificity factor subunit 5 Length=277 Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 61/88 (69%), Gaps = 0/88 (0%) Query 13 LEVGEFLGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCLTVVPI 72 +EVGE+LG WWR EF+ +PYLPPH TRPKE +R++QV LP + F++P L +P+ Sbjct 186 VEVGEYLGTWWRTEFNYSPLPYLPPHSTRPKETIRIYQVILPPKLLFKLPKHHVLKSLPL 245 Query 73 FELSPQRVGLAIGGLSHLIARFSIRLMV 100 F+L P G+A G + LI+RF I+ MV Sbjct 246 FDLDPNIFGIACGSIPQLISRFQIQSMV 273 > tpv:TP04_0626 mRNA cleavage factor protein; K14397 cleavage and polyadenylation specificity factor subunit 5 Length=226 Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 2/100 (2%) Query 2 HKKQLSTDGP--DLEVGEFLGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSF 59 HK QL+ ++VGE L ++WR +F+ + +PYLP H RPKE++ ++QV L C Sbjct 124 HKHQLNIKETIETIQVGELLADFWRCDFNTEPLPYLPLHTNRPKEKISLYQVVLQESCKI 183 Query 60 RIPVGFCLTVVPIFELSPQRVGLAIGGLSHLIARFSIRLM 99 +P G+ L VP+++ GL++G L HL++RF I + Sbjct 184 SVPKGYSLKFVPLYDFYNPEFGLSLGSLPHLLSRFKISYL 223 > bbo:BBOV_III007210 17.m07632; hypothetical protein; K14397 cleavage and polyadenylation specificity factor subunit 5 Length=357 Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 0/98 (0%) Query 2 HKKQLSTDGPDLEVGEFLGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRI 61 H+ + + + VGEF+GE+WR E+D D++PYLP H+ RP+E++ ++QV L +CSF Sbjct 121 HQLNVRANVDTIIVGEFMGEFWRAEYDSDVLPYLPLHINRPREKILIYQVTLREQCSFIA 180 Query 62 PVGFCLTVVPIFELSPQRVGLAIGGLSHLIARFSIRLM 99 P + + + E +AI L HL+ RF++ M Sbjct 181 PGDMHIEPMALHEFYCAEQSVAISALPHLLTRFNLSFM 218 > ath:AT4G25550 protein binding; K14397 cleavage and polyadenylation specificity factor subunit 5 Length=200 Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 2/91 (2%) Query 11 PDLEVGEFLGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCLTVV 70 PD VGE + WWR F+ + PY PPH+T+PKE R++ V L + F +P L V Sbjct 108 PDWTVGECVATWWRPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAV 167 Query 71 PIFEL--SPQRVGLAIGGLSHLIARFSIRLM 99 P+FEL + QR G I + ++RF ++ Sbjct 168 PLFELYDNVQRYGPVISTIPQQLSRFHFNMI 198 > cel:F43G9.5 hypothetical protein; K14397 cleavage and polyadenylation specificity factor subunit 5 Length=227 Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query 19 LGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCLTVVPIFEL--S 76 +G WWR FD PY+P HVT+PKE ++ VQLP + +F +P F L P+FEL + Sbjct 142 IGNWWRPNFDPPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPLFELYDN 201 Query 77 PQRVGLAIGGLSHLIARFSI 96 G I L ++RF+ Sbjct 202 AAAYGPLISSLPTTLSRFNF 221 > ath:AT4G29820 CFIM-25 Length=222 Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 2/88 (2%) Query 14 EVGEFLGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCLTVVPIF 73 EVGE +G WWR F+ + P+LPP++ PKE ++ V+LP F +P F L VP+ Sbjct 133 EVGECIGMWWRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLC 192 Query 74 EL--SPQRVGLAIGGLSHLIARFSIRLM 99 +L + + G + + L+++FS +M Sbjct 193 QLHENEKTYGPIMSQIPKLLSKFSFNMM 220 > xla:444830 nudt21, MGC84447, cpsf5; nudix (nucleoside diphosphate linked moiety X)-type motif 21; K14397 cleavage and polyadenylation specificity factor subunit 5 Length=227 Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%) Query 12 DLEVGEFLGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCLTVVP 71 D + + +G WWR F+ PY+P H+T+PKE ++ VQL + F +P + L P Sbjct 138 DWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAP 197 Query 72 IFELSPQRVGLA--IGGLSHLIARFSI 96 +FEL G I L L++RF+ Sbjct 198 LFELYDNAPGYGPIISSLPQLLSRFNF 224 > dre:394092 cpsf5, MGC63966, zgc:63966; cleavage and polyadenylation specific factor 5; K14397 cleavage and polyadenylation specificity factor subunit 5 Length=228 Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%) Query 12 DLEVGEFLGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCLTVVP 71 D + + +G WWR F+ PY+P H+T+PKE ++ VQL + F +P + L P Sbjct 139 DWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAP 198 Query 72 IFELSPQRVGLA--IGGLSHLIARFSI 96 +FEL G I L L++RF+ Sbjct 199 LFELYDNAPGYGPIISSLPQLLSRFNF 225 > mmu:68219 Nudt21, 25kDa, 3110048P04Rik, 5730530J16Rik, AU014860, AW549947, Cpsf5; nudix (nucleoside diphosphate linked moiety X)-type motif 21; K14397 cleavage and polyadenylation specificity factor subunit 5 Length=227 Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%) Query 12 DLEVGEFLGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCLTVVP 71 D + + +G WWR F+ PY+P H+T+PKE ++ VQL + F +P + L P Sbjct 138 DWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAP 197 Query 72 IFELSPQRVGLA--IGGLSHLIARFSI 96 +FEL G I L L++RF+ Sbjct 198 LFELYDNAPGYGPIISSLPQLLSRFNF 224 > hsa:11051 NUDT21, CFIM25, CPSF5, DKFZp686H1588; nudix (nucleoside diphosphate linked moiety X)-type motif 21; K14397 cleavage and polyadenylation specificity factor subunit 5 Length=227 Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%) Query 12 DLEVGEFLGEWWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCLTVVP 71 D + + +G WWR F+ PY+P H+T+PKE ++ VQL + F +P + L P Sbjct 138 DWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAP 197 Query 72 IFELSPQRVGLA--IGGLSHLIARFSI 96 +FEL G I L L++RF+ Sbjct 198 LFELYDNAPGYGPIISSLPQLLSRFNF 224 > cel:ZC412.2 gcy-14; Guanylyl CYclase family member (gcy-14); K01769 guanylate cyclase, other [EC:4.6.1.2] Length=1170 Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 7/47 (14%) Query 125 TSFDIHELEEQPDV------AGGHSEAKPALENDGELEMLPPELQHL 165 ++FD+ +E+PDV GGH+ +P+L+ GE + P L HL Sbjct 792 SAFDLENRKEKPDVIIYQVKKGGHNPMRPSLDT-GETVEINPALLHL 837 > xla:100037166 nkcc1; Na-K-2Cl cotransporter 1; K10951 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 Length=1158 Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 27/152 (17%) Query 22 WWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCLTVVPIFELSPQRVG 81 WW FDD + L P++ K++ R C R+ +G + R+ Sbjct 973 WWL--FDDGGLTLLIPYLITTKKKWR--------DCKIRVFIGGKI----------NRID 1012 Query 82 LAIGGLSHLIARFSIR---LMVPTLDKYEADTSLEHKGEAGLDDLGTSFDIHELEEQPDV 138 ++ L+++F I +MV + +T + + A +++ F +HE E++ +V Sbjct 1013 HDRRAMATLLSKFRIDFSDIMVLG----DINTKPKKENVAAFEEMIEPFRLHEDEKEQEV 1068 Query 139 AGGHSEAKPALENDGELEMLPPELQHLAELEE 170 A E +P D ELE+ + L E Sbjct 1069 ADKMKEEEPWRITDNELELYKTKTHRQIRLNE 1100 > xla:100137628 hypothetical protein LOC100137628 Length=544 Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 29/119 (24%) Query 73 FELSPQRVGLAIGGLSHLIARFSIRLMVPTLDKY-----EADTSLEHKGEAGLDDLGTSF 127 ++ P+ + L+HL + ++ + Y E+D+S EA ++L F Sbjct 184 YQKQPEVKSTSYSRLNHLSSPYAYSTPLFKKASYRNLRKESDSS----NEASFEELSPCF 239 Query 128 DIHELEEQPDVAGGHSEAK-----------------PALENDGELEMLPP---ELQHLA 166 +L E+P AGG + K P LE+D E LPP E++HLA Sbjct 240 SKEDLHEEPSHAGGMLKEKIHSLGQFIPTTRVLPLNPELESDEEFLSLPPHLKEIEHLA 298 > tgo:TGME49_047390 ATPase, AAA family domain-containing protein (EC:2.7.11.1 4.1.1.70 3.4.21.72) Length=3668 Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 0/42 (0%) Query 96 IRLMVPTLDKYEADTSLEHKGEAGLDDLGTSFDIHELEEQPD 137 RL D EA+ S+E +GEA DD G S +EQ D Sbjct 2689 ARLERQDADAREAEASMEERGEADRDDEGGSTSTCSGKEQED 2730 > mmu:20983 Syt4, SytIV; synaptotagmin IV Length=425 Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query 105 KYEADTSLEHKGEAGLDDLGTSFDIHELEEQPDVAGGHSEAKPALENDGELEMLPPEL 162 K+ D E KG+A L +L D+ E+ D+ G +A P + +LE + P+L Sbjct 72 KFGGDDKSEVKGKAALPNLSLHLDL----EKRDLNGNFPKANPKAGSSSDLENVTPKL 125 > dre:445153 im:7149072; si:ch211-175f11.2 Length=1741 Score = 28.9 bits (63), Expect = 8.0, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Query 9 DGPDLEVGEFLGEWWRGEFDDDLVPYLPPHVTRPKE 44 +G + V E GEWWRG D P + +PKE Sbjct 1049 EGDTILVSEREGEWWRGSIGDR-AGLFPSNYVKPKE 1083 > mmu:20496 Slc12a2, 9330166H04Rik, Nkcc1, mBSC2, sy-ns; solute carrier family 12, member 2; K10951 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 Length=1206 Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 27/139 (19%) Query 22 WWRGEFDDDLVPYLPPHVTRPKERVRVHQVQLPHRCSFRIPVGFCLTVVPIFELSPQRVG 81 WW FDD + L P++ K++ + C R+ +G + R+ Sbjct 1021 WWL--FDDGGLTLLIPYLLTTKKKWK--------DCKIRVFIGGKI----------NRID 1060 Query 82 LAIGGLSHLIARFSIR---LMVPTLDKYEADTSLEHKGEAGLDDLGTSFDIHELEEQPDV 138 ++ L+++F I +MV + +T + + DD+ + +HE +++ D+ Sbjct 1061 HDRRAMATLLSKFRIDFSDIMVLG----DINTKPKKENIIAFDDMIEPYRLHEDDKEQDI 1116 Query 139 AGGHSEAKPALENDGELEM 157 A E +P D ELE+ Sbjct 1117 ADKMKEDEPWRITDNELEL 1135 Lambda K H 0.318 0.140 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 4287611064 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40