bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_3190_orf3
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_016790 ABC transporter, putative (EC:1.2.7.8 3.6.3.... 243 2e-64
cpv:cgd1_980 RNase L inhibitor-like protein 231 1e-60
pfa:MAL13P1.344 RNAse L inhibitor protein, putative; K06174 AT... 226 2e-59
tpv:TP04_0855 RNAse L inhibitor; K06174 ATP-binding cassette, ... 223 3e-58
ath:AT4G19210 ATRLI2; ATRLI2; transporter; K06174 ATP-binding ... 221 1e-57
bbo:BBOV_III009450 17.m07819; ABC transporter, ATP-binding dom... 220 2e-57
ath:AT3G13640 ATRLI1; ATRLI1; transporter 219 4e-57
sce:YDR091C RLI1; Essential iron-sulfur protein required for r... 212 5e-55
mmu:24015 Abce1, C79080, Oabp, RLI, RNS41, Rnaseli; ATP-bindin... 206 5e-53
hsa:6059 ABCE1, ABC38, OABP, RLI, RNASEL1, RNASELI, RNS4I; ATP... 206 5e-53
dre:406324 abce1, MGC56045, wu:fb34c09, wu:fe47b01, wu:fi09g07... 204 1e-52
xla:380454 abce1, MGC53437; ATP-binding cassette, sub-family E... 203 2e-52
cel:Y39E4B.1 abce-1; ABC transporter, class E family member (a... 182 6e-46
hsa:10351 ABCA8, KIAA0822, MGC163152; ATP-binding cassette, su... 40.8 0.003
eco:b4097 phnK, ECK4090, JW5727; carbon-phosphorus lyase compl... 40.0 0.004
mmu:217258 Abca8a; ATP-binding cassette, sub-family A (ABC1), ... 39.7 0.005
cel:F12B6.1 abt-2; ABC Transporter family member (abt-2) 38.9 0.010
mmu:27404 Abca8b, Abca8; ATP-binding cassette, sub-family A (A... 38.5 0.012
eco:b0820 ybiT, ECK0810, JW0804; fused predicted transporter s... 38.1 0.018
hsa:10349 ABCA10, EST698739; ATP-binding cassette, sub-family ... 37.7 0.021
mmu:268379 Abca13, 9830132L24, A930002G16Rik, AI956815; ATP-bi... 37.7 0.024
bbo:BBOV_IV004910 23.m06536; ABC transporter 37.7 0.024
cpv:cgd6_5350 ABC transporter protein 37.4 0.026
hsa:10350 ABCA9, DKFZp686F2450, EST640918, MGC75415; ATP-bindi... 37.4 0.030
eco:b3352 yheS, ECK3340, JW3315; fused predicted transporter s... 37.0 0.034
ath:AT3G13220 ABC transporter family protein 37.0 0.037
xla:497268 abca4; ATP-binding cassette, sub-family A (ABC1), m... 36.6 0.047
ath:AT1G65410 ATNAP11 (ARABIDOPSIS THALIANA NON-INTRINSIC ABC ... 36.2 0.066
ath:AT4G25750 ABC transporter family protein 36.2 0.070
hsa:23461 ABCA5, ABC13, DKFZp451F117, DKFZp779N2435, EST90625,... 35.8 0.072
hsa:23460 ABCA6, EST155051, FLJ43498; ATP-binding cassette, su... 35.8 0.076
dre:571189 abcb11b; ATP-binding cassette, sub-family B (MDR/TA... 35.8 0.078
eco:b0151 fhuC, ECK0150, JW0147; iron-hydroxamate transporter ... 35.8 0.081
mmu:11304 Abca4, AW050280, Abc10, Abcr, D430003I15Rik, RmP; AT... 35.8 0.085
hsa:24 ABCA4, ABC10, ABCR, ARMD2, CORD3, DKFZp781N1972, FFM, F... 35.8 0.085
eco:b1290 sapF, ECK1285, JW1283; antimicrobial peptide transpo... 35.8 0.087
eco:b1900 araG, ECK1898, JW1888; fused L-arabinose transporter... 35.4 0.096
ath:AT2G13610 ABC transporter family protein 35.4 0.10
eco:b3749 rbsA, ECK3743, JW3728, rbsP, rbsT; fused D-ribose tr... 35.4 0.11
dre:100151075 abca5, MGC163009, zgc:163009; ATP-binding casset... 35.0 0.13
dre:100333927 ABC transporter-related protein-like 35.0 0.13
ath:AT3G21090 ABC transporter family protein 35.0 0.14
sce:YCR011C ADP1; Adp1p 34.7 0.16
hsa:6891 TAP2, ABC18, ABCB3, APT2, D6S217E, PSF2, RING11; tran... 34.7 0.16
mmu:217265 Abca5, ABC13, B930033A02Rik, mKIAA1888; ATP-binding... 34.7 0.16
ath:AT5G09930 ATGCN2; ATGCN2; transporter 34.7 0.19
mmu:11303 Abca1, Abc1; ATP-binding cassette, sub-family A (ABC... 34.7 0.20
hsa:6890 TAP1, ABC17, ABCB2, APT1, D6S114E, FLJ26666, FLJ41500... 34.7 0.20
ath:AT5G52860 ABC transporter family protein 34.3 0.20
cel:Y42G9A.6 wht-7; WHiTe (Drosophila) related ABC transporte ... 34.3 0.22
> tgo:TGME49_016790 ABC transporter, putative (EC:1.2.7.8 3.6.3.24
3.6.3.25); K06174 ATP-binding cassette, sub-family E, member
1
Length=613
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/142 (78%), Positives = 125/142 (88%), Gaps = 0/142 (0%)
Query 38 MAPGKKQQEGHEDPSRLRIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVAL 97
MAP +K++ D +RLRIAIVN D+CKPKKCRQECK++CPVVRTGK CIE +++SK+A
Sbjct 1 MAPKQKKETEAVDDARLRIAIVNADRCKPKKCRQECKRNCPVVRTGKLCIEADATSKIAF 60
Query 98 ISEPLCIGCGICVKKCPFSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLV 157
ISEPLCIGCGICVKKCPF AI IINLPRDLG +V HR+G N FKLHRLPVPRPGQVLGLV
Sbjct 61 ISEPLCIGCGICVKKCPFEAIAIINLPRDLGKDVTHRFGANSFKLHRLPVPRPGQVLGLV 120
Query 158 GTNGTGKSTALKILSAKLKPNL 179
GTNG GKSTALKILSAKLKPNL
Sbjct 121 GTNGIGKSTALKILSAKLKPNL 142
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 0/27 (0%)
Query 152 QVLGLVGTNGTGKSTALKILSAKLKPN 178
++L ++G NGTGKST +++L+ LK +
Sbjct 386 EILVMLGQNGTGKSTLIRMLAGLLKAD 412
> cpv:cgd1_980 RNase L inhibitor-like protein
Length=618
Score = 231 bits (588), Expect = 1e-60, Method: Composition-based stats.
Identities = 107/144 (74%), Positives = 119/144 (82%), Gaps = 2/144 (1%)
Query 38 MAPGK--KQQEGHEDPSRLRIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKV 95
M P K K G E+ SRLRIAIV D+CKPK CRQECK CPVVRTGK C+EV+SSSK+
Sbjct 1 MPPKKSTKSGGGDENESRLRIAIVEADRCKPKNCRQECKSFCPVVRTGKLCVEVDSSSKI 60
Query 96 ALISEPLCIGCGICVKKCPFSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLG 155
A ISEPLCIGCGICVKKCP+SAI IINLP+++ + HRYG N FKLHRLPVPRPGQVLG
Sbjct 61 ASISEPLCIGCGICVKKCPYSAITIINLPKNMSKDTTHRYGKNSFKLHRLPVPRPGQVLG 120
Query 156 LVGTNGTGKSTALKILSAKLKPNL 179
LVGTNG GKSTAL+ILS KL+PNL
Sbjct 121 LVGTNGIGKSTALQILSGKLRPNL 144
> pfa:MAL13P1.344 RNAse L inhibitor protein, putative; K06174
ATP-binding cassette, sub-family E, member 1
Length=619
Score = 226 bits (577), Expect = 2e-59, Method: Composition-based stats.
Identities = 99/135 (73%), Positives = 118/135 (87%), Gaps = 0/135 (0%)
Query 45 QEGHEDPSRLRIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVALISEPLCI 104
+E + S+LRIAIV+ DKCKPKKC ECKK+CP+V+TGKFCIEV+ +SK+A ISE LCI
Sbjct 11 KENKLEASKLRIAIVSSDKCKPKKCHLECKKNCPIVKTGKFCIEVDHASKIAYISETLCI 70
Query 105 GCGICVKKCPFSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLVGTNGTGK 164
GCGICVKKCPF++I IINLP+D+ +V HRYGPN FKLHRLP+P+ GQ+LGLVGTNG GK
Sbjct 71 GCGICVKKCPFTSISIINLPKDINKDVVHRYGPNTFKLHRLPIPKLGQILGLVGTNGIGK 130
Query 165 STALKILSAKLKPNL 179
STALKILS+KLKPNL
Sbjct 131 STALKILSSKLKPNL 145
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 20/27 (74%), Gaps = 0/27 (0%)
Query 152 QVLGLVGTNGTGKSTALKILSAKLKPN 178
++ L+G NG+GKST +++ + +KP+
Sbjct 390 EIFVLLGQNGSGKSTFIRLFAGLIKPD 416
> tpv:TP04_0855 RNAse L inhibitor; K06174 ATP-binding cassette,
sub-family E, member 1
Length=636
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 102/128 (79%), Positives = 114/128 (89%), Gaps = 0/128 (0%)
Query 52 SRLRIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVALISEPLCIGCGICVK 111
++LRIAIV+ DKCKPKKCRQECK++CPV +TGK CIEV+ +SK+A ISE LCIGCGICVK
Sbjct 17 NKLRIAIVSTDKCKPKKCRQECKRTCPVTKTGKQCIEVDPTSKIAFISEHLCIGCGICVK 76
Query 112 KCPFSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLVGTNGTGKSTALKIL 171
KCPF AI IINLPRDLG + HR+GPN FKLHRLPVPRPGQVLGLVGTNG GKSTALK+L
Sbjct 77 KCPFEAITIINLPRDLGKDTTHRFGPNSFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVL 136
Query 172 SAKLKPNL 179
S KLKPNL
Sbjct 137 SGKLKPNL 144
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 152 QVLGLVGTNGTGKSTALKILSAKLKPN 178
+++ L+G NGTGK+T +K+L+ KL+P+
Sbjct 386 EIIVLLGENGTGKTTFIKMLAGKLQPD 412
> ath:AT4G19210 ATRLI2; ATRLI2; transporter; K06174 ATP-binding
cassette, sub-family E, member 1
Length=605
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/125 (82%), Positives = 109/125 (87%), Gaps = 0/125 (0%)
Query 55 RIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVALISEPLCIGCGICVKKCP 114
RIAIV+ D+CKPKKCRQECKKSCPVV+TGK CIEV SK+A ISE LCIGCGICVKKCP
Sbjct 7 RIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTVGSKLAFISEELCIGCGICVKKCP 66
Query 115 FSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLVGTNGTGKSTALKILSAK 174
F AIQIINLPRDL + HRYG N FKLHRLPVPRPGQVLGLVGTNG GKSTALKIL+ K
Sbjct 67 FEAIQIINLPRDLEKDTTHRYGANTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGK 126
Query 175 LKPNL 179
LKPNL
Sbjct 127 LKPNL 131
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 22/27 (81%), Gaps = 0/27 (0%)
Query 152 QVLGLVGTNGTGKSTALKILSAKLKPN 178
Q++ ++G NGTGK+T +++L+ LKP+
Sbjct 375 QIIVMLGENGTGKTTFIRMLAGLLKPD 401
> bbo:BBOV_III009450 17.m07819; ABC transporter, ATP-binding domain
containing protein; K06174 ATP-binding cassette, sub-family
E, member 1
Length=616
Score = 220 bits (561), Expect = 2e-57, Method: Composition-based stats.
Identities = 99/128 (77%), Positives = 111/128 (86%), Gaps = 0/128 (0%)
Query 52 SRLRIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVALISEPLCIGCGICVK 111
S+LR+AIV+ DKCKPKKCRQECK++CPV + GK CI + +SK+A ISE LCIGCGICVK
Sbjct 18 SKLRVAIVSTDKCKPKKCRQECKRNCPVAKAGKQCIIADPTSKIAFISETLCIGCGICVK 77
Query 112 KCPFSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLVGTNGTGKSTALKIL 171
KCPF AI IINLPRDLG + HR+GPN FKLHRLPVPRPGQ+LGLVGTNG GKSTALKIL
Sbjct 78 KCPFEAITIINLPRDLGKDTTHRFGPNTFKLHRLPVPRPGQILGLVGTNGIGKSTALKIL 137
Query 172 SAKLKPNL 179
S KLKPNL
Sbjct 138 SGKLKPNL 145
> ath:AT3G13640 ATRLI1; ATRLI1; transporter
Length=603
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/125 (81%), Positives = 110/125 (88%), Gaps = 0/125 (0%)
Query 55 RIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVALISEPLCIGCGICVKKCP 114
RIAIV+ D+CKPKKCRQECKKSCPVV+TGK CIEV S+SK A ISE LCIGCGICVKKCP
Sbjct 7 RIAIVSEDRCKPKKCRQECKKSCPVVKTGKLCIEVGSTSKSAFISEELCIGCGICVKKCP 66
Query 115 FSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLVGTNGTGKSTALKILSAK 174
F AIQIINLP+DL + HRYG N FKLHRLP+PRPGQVLGLVGTNG GKSTALKIL+ K
Sbjct 67 FEAIQIINLPKDLAKDTTHRYGANGFKLHRLPIPRPGQVLGLVGTNGIGKSTALKILAGK 126
Query 175 LKPNL 179
LKPNL
Sbjct 127 LKPNL 131
> sce:YDR091C RLI1; Essential iron-sulfur protein required for
ribosome biogenesis and translation initiation; facilitates
binding of a multifactor complex (MFC) of translation initiation
factors to the small ribosomal subunit; predicted ABC
family ATPase; K06174 ATP-binding cassette, sub-family E, member
1
Length=608
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 100/125 (80%), Positives = 107/125 (85%), Gaps = 0/125 (0%)
Query 55 RIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVALISEPLCIGCGICVKKCP 114
RIAIV+ DKCKPKKCRQECK+SCPVV+TGK CIEV +SK+A ISE LCIGCGICVKKCP
Sbjct 7 RIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCP 66
Query 115 FSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLVGTNGTGKSTALKILSAK 174
F AIQIINLP +L A V HRY N FKLHRLP PRPGQVLGLVGTNG GKSTALKIL+ K
Sbjct 67 FDAIQIINLPTNLEAHVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKILAGK 126
Query 175 LKPNL 179
KPNL
Sbjct 127 QKPNL 131
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 22/27 (81%), Gaps = 0/27 (0%)
Query 152 QVLGLVGTNGTGKSTALKILSAKLKPN 178
++L ++G NGTGK+T +K+L+ LKP+
Sbjct 379 EILVMMGENGTGKTTLIKLLAGALKPD 405
> mmu:24015 Abce1, C79080, Oabp, RLI, RNS41, Rnaseli; ATP-binding
cassette, sub-family E (OABP), member 1; K06174 ATP-binding
cassette, sub-family E, member 1
Length=599
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 104/125 (83%), Gaps = 0/125 (0%)
Query 55 RIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVALISEPLCIGCGICVKKCP 114
RIAIVN DKCKPKKCRQECKKSCPVVR GK CIEV SK+A ISE LCIGCGIC+KKCP
Sbjct 7 RIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCP 66
Query 115 FSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLVGTNGTGKSTALKILSAK 174
F A+ I+NLP +L E HRY N FKLHRLP+PRPG+VLGLVGTNG GKSTALKIL+ K
Sbjct 67 FGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGK 126
Query 175 LKPNL 179
KPNL
Sbjct 127 QKPNL 131
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 152 QVLGLVGTNGTGKSTALKILSAKLKPN 178
+++ ++G NGTGK+T +++L+ +LKP+
Sbjct 373 EIMVMLGENGTGKTTFIRMLAGRLKPD 399
> hsa:6059 ABCE1, ABC38, OABP, RLI, RNASEL1, RNASELI, RNS4I; ATP-binding
cassette, sub-family E (OABP), member 1; K06174 ATP-binding
cassette, sub-family E, member 1
Length=599
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 104/125 (83%), Gaps = 0/125 (0%)
Query 55 RIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVALISEPLCIGCGICVKKCP 114
RIAIVN DKCKPKKCRQECKKSCPVVR GK CIEV SK+A ISE LCIGCGIC+KKCP
Sbjct 7 RIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCP 66
Query 115 FSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLVGTNGTGKSTALKILSAK 174
F A+ I+NLP +L E HRY N FKLHRLP+PRPG+VLGLVGTNG GKSTALKIL+ K
Sbjct 67 FGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGK 126
Query 175 LKPNL 179
KPNL
Sbjct 127 QKPNL 131
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 152 QVLGLVGTNGTGKSTALKILSAKLKPN 178
+++ ++G NGTGK+T +++L+ +LKP+
Sbjct 373 EIMVMLGENGTGKTTFIRMLAGRLKPD 399
> dre:406324 abce1, MGC56045, wu:fb34c09, wu:fe47b01, wu:fi09g07,
zgc:111906, zgc:56045; ATP-binding cassette, sub-family
E (OABP), member 1; K06174 ATP-binding cassette, sub-family
E, member 1
Length=599
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 103/125 (82%), Gaps = 0/125 (0%)
Query 55 RIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVALISEPLCIGCGICVKKCP 114
RIAIVN DKCKPKKCRQECKKSCPVVR GK CIEV SK+ ISE LCIGCGIC+KKCP
Sbjct 7 RIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVSPQSKIVWISESLCIGCGICIKKCP 66
Query 115 FSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLVGTNGTGKSTALKILSAK 174
F A+ I+NLP +L E HRY N FKLHRLP+PRPG+VLGLVGTNG GKSTALKIL+ K
Sbjct 67 FGALSIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGK 126
Query 175 LKPNL 179
KPNL
Sbjct 127 QKPNL 131
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 22/27 (81%), Gaps = 0/27 (0%)
Query 152 QVLGLVGTNGTGKSTALKILSAKLKPN 178
+++ ++G NGTGK+T +++L+ LKP+
Sbjct 373 EIMVMLGENGTGKTTFIRMLAGGLKPD 399
> xla:380454 abce1, MGC53437; ATP-binding cassette, sub-family
E (OABP), member 1; K06174 ATP-binding cassette, sub-family
E, member 1
Length=599
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 104/125 (83%), Gaps = 0/125 (0%)
Query 55 RIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVALISEPLCIGCGICVKKCP 114
RIAIV+ DKCKPKKCRQECKKSCPVVR GK CIEV SK+A ISE LCIGCGICVKKCP
Sbjct 7 RIAIVSHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICVKKCP 66
Query 115 FSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLVGTNGTGKSTALKILSAK 174
F A+ I+NLP +L E HRY N FKLHRLP+PRPG+VLGLVGTNG GKSTALKIL+ K
Sbjct 67 FVALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGK 126
Query 175 LKPNL 179
KPNL
Sbjct 127 QKPNL 131
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 152 QVLGLVGTNGTGKSTALKILSAKLKPN 178
+++ ++G NGTGK+T +++L+ +LKP+
Sbjct 373 EIMVMLGENGTGKTTFIRMLAGRLKPD 399
> cel:Y39E4B.1 abce-1; ABC transporter, class E family member
(abce-1); K06174 ATP-binding cassette, sub-family E, member
1
Length=610
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 99/126 (78%), Gaps = 0/126 (0%)
Query 54 LRIAIVNGDKCKPKKCRQECKKSCPVVRTGKFCIEVESSSKVALISEPLCIGCGICVKKC 113
LRIAIV D+CKPK C CK++CPV R GK CI VE++S ++ ISE LCIGCGICVKKC
Sbjct 17 LRIAIVEKDRCKPKNCGLACKRACPVNRQGKQCIVVEATSTISQISEILCIGCGICVKKC 76
Query 114 PFSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVPRPGQVLGLVGTNGTGKSTALKILSA 173
P+ AI+IINLP +L E HRY N FKLHRLP PR G+VLGLVGTNG GKSTALKIL+
Sbjct 77 PYDAIKIINLPANLANETTHRYSQNSFKLHRLPTPRCGEVLGLVGTNGIGKSTALKILAG 136
Query 174 KLKPNL 179
K KPNL
Sbjct 137 KQKPNL 142
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 21/26 (80%), Gaps = 0/26 (0%)
Query 152 QVLGLVGTNGTGKSTALKILSAKLKP 177
+++ ++G NGTGK+T +K+++ LKP
Sbjct 382 EIIVMLGENGTGKTTMIKMMAGSLKP 407
> hsa:10351 ABCA8, KIAA0822, MGC163152; ATP-binding cassette,
sub-family A (ABC1), member 8; K05650 ATP-binding cassette,
subfamily A (ABC1), member 8
Length=1581
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 23/29 (79%), Gaps = 0/29 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKP 177
R G+VLGL+G NG GKST++K+++ KP
Sbjct 1274 RKGEVLGLLGHNGAGKSTSIKVITGDTKP 1302
> eco:b4097 phnK, ECK4090, JW5727; carbon-phosphorus lyase complex
subunit; K05781 putative phosphonate transport system ATP-binding
protein
Length=252
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 24/28 (85%), Gaps = 0/28 (0%)
Query 150 PGQVLGLVGTNGTGKSTALKILSAKLKP 177
PG+VLG+VG +G+GK+T LK +SA+L P
Sbjct 30 PGEVLGIVGESGSGKTTLLKSISARLTP 57
> mmu:217258 Abca8a; ATP-binding cassette, sub-family A (ABC1),
member 8a; K05650 ATP-binding cassette, subfamily A (ABC1),
member 8
Length=1619
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 25/30 (83%), Gaps = 0/30 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKPN 178
R G+V+GL+G NG GKST++K+++ + KP+
Sbjct 1312 RKGEVVGLLGHNGAGKSTSIKMITGETKPS 1341
> cel:F12B6.1 abt-2; ABC Transporter family member (abt-2)
Length=2146
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
Query 150 PGQVLGLVGTNGTGKSTALKILSAKLKP 177
PG+ GL+G NG GK+T +L+AK++P
Sbjct 1827 PGECFGLLGLNGAGKTTTFAMLTAKIRP 1854
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 151 GQVLGLVGTNGTGKSTALKILSAKLKPN 178
GQ+ GL+G NG GK+T + IL P+
Sbjct 955 GQITGLLGHNGAGKTTTMSILCGLYAPS 982
> mmu:27404 Abca8b, Abca8; ATP-binding cassette, sub-family A
(ABC1), member 8b; K05650 ATP-binding cassette, subfamily A
(ABC1), member 8
Length=1620
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 0/28 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLK 176
R G++LGL+G NG GKST+LK++S K
Sbjct 1312 RKGEILGLLGHNGAGKSTSLKMISGDTK 1339
> eco:b0820 ybiT, ECK0810, JW0804; fused predicted transporter
subunits of ABC superfamily: ATP-binding components
Length=530
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 0/29 (0%)
Query 151 GQVLGLVGTNGTGKSTALKILSAKLKPNL 179
G GL+G NG+GKST +KIL L+P L
Sbjct 27 GNRYGLIGANGSGKSTFMKILGGDLEPTL 55
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 0/28 (0%)
Query 151 GQVLGLVGTNGTGKSTALKILSAKLKPN 178
G+ L ++GTNG GKST LK L L+P+
Sbjct 345 GEKLAVLGTNGVGKSTLLKTLVGDLQPD 372
> hsa:10349 ABCA10, EST698739; ATP-binding cassette, sub-family
A (ABC1), member 10; K05652 ATP-binding cassette, subfamily
A (ABC1), member 10
Length=1543
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 23/29 (79%), Gaps = 0/29 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKP 177
+ G+VLGL+G NG GKST++K+++ KP
Sbjct 1230 KKGEVLGLLGHNGAGKSTSIKMITGCTKP 1258
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 0/23 (0%)
Query 151 GQVLGLVGTNGTGKSTALKILSA 173
GQ+ ++G NG GKST L ILS
Sbjct 420 GQITAILGHNGAGKSTLLNILSG 442
> mmu:268379 Abca13, 9830132L24, A930002G16Rik, AI956815; ATP-binding
cassette, sub-family A (ABC1), member 13; K05647 ATP
binding cassette, subfamily A (ABC1), member 13
Length=5034
Score = 37.7 bits (86), Expect = 0.024, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query 145 LPVPRPGQVLGLVGTNGTGKSTALKILSAKLKPN 178
L +PR G+ GL+G NG GKST KIL+ + P+
Sbjct 4717 LGIPR-GECFGLLGVNGAGKSTTFKILNGETPPS 4749
> bbo:BBOV_IV004910 23.m06536; ABC transporter
Length=628
Score = 37.7 bits (86), Expect = 0.024, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
Query 150 PGQVLGLVGTNGTGKSTALKILSAKLKP 177
PG+VL +VG NG GKST ++L+A +P
Sbjct 414 PGRVLAIVGANGMGKSTTARLLTALYRP 441
> cpv:cgd6_5350 ABC transporter protein
Length=782
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 22/27 (81%), Gaps = 0/27 (0%)
Query 150 PGQVLGLVGTNGTGKSTALKILSAKLK 176
PGQ++G++G +G+GKST L LS +LK
Sbjct 135 PGQLIGIMGPSGSGKSTLLNALSGRLK 161
> hsa:10350 ABCA9, DKFZp686F2450, EST640918, MGC75415; ATP-binding
cassette, sub-family A (ABC1), member 9; K05651 ATP-binding
cassette, subfamily A (ABC1), member 9
Length=1624
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 22/29 (75%), Gaps = 0/29 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKP 177
+ G+V+GL+G NG GKST +K+++ KP
Sbjct 1317 KKGEVIGLLGHNGAGKSTTIKMITGDTKP 1345
> eco:b3352 yheS, ECK3340, JW3315; fused predicted transporter
subunits of ABC superfamily: ATP-binding components; K06158
ATP-binding cassette, sub-family F, member 3
Length=637
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
Query 150 PGQVLGLVGTNGTGKSTALKILSAKLKP 177
PG +GL+G NG GKST +K+L+ +L P
Sbjct 337 PGSRIGLLGRNGAGKSTLIKLLAGELAP 364
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 0/29 (0%)
Query 150 PGQVLGLVGTNGTGKSTALKILSAKLKPN 178
PGQ +GLVG NG GKST L +L ++ +
Sbjct 26 PGQKVGLVGKNGCGKSTLLALLKNEISAD 54
> ath:AT3G13220 ABC transporter family protein
Length=685
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 23/30 (76%), Gaps = 0/30 (0%)
Query 150 PGQVLGLVGTNGTGKSTALKILSAKLKPNL 179
PG++L L+G +G+GK+T LKI+ +L N+
Sbjct 116 PGEILALMGPSGSGKTTLLKIMGGRLTDNV 145
> xla:497268 abca4; ATP-binding cassette, sub-family A (ABC1),
member 4; K05644 ATP-binding cassette, subfamily A (ABC1),
member 4
Length=2363
Score = 36.6 bits (83), Expect = 0.047, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 0/28 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLK 176
RPG+ GL+G NG GK+T K+L+ ++
Sbjct 2042 RPGECFGLLGVNGAGKTTTFKMLTGDIQ 2069
> ath:AT1G65410 ATNAP11 (ARABIDOPSIS THALIANA NON-INTRINSIC ABC
PROTEIN 11); transporter; K02065 putative ABC transport system
ATP-binding protein
Length=345
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%), Gaps = 0/30 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKPN 178
R G+ +G++G +GTGKST LKI++ L P+
Sbjct 108 RHGEAVGVIGPSGTGKSTILKIMAGLLAPD 137
> ath:AT4G25750 ABC transporter family protein
Length=577
Score = 36.2 bits (82), Expect = 0.070, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 0/28 (0%)
Query 150 PGQVLGLVGTNGTGKSTALKILSAKLKP 177
P Q+L ++G +G GKST L IL+A+ P
Sbjct 40 PSQILAIIGPSGAGKSTLLDILAARTSP 67
> hsa:23461 ABCA5, ABC13, DKFZp451F117, DKFZp779N2435, EST90625,
FLJ16381; ATP-binding cassette, sub-family A (ABC1), member
5; K05648 ATP-binding cassette, subfamily A (ABC1), member
5
Length=1642
Score = 35.8 bits (81), Expect = 0.072, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 0/29 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKP 177
+ G++LGL+G NG GKST + IL ++P
Sbjct 1324 KKGEILGLLGPNGAGKSTIINILVGDIEP 1352
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 151 GQVLGLVGTNGTGKSTALKILSAKLKPN 178
GQ+ L+G +GTGKST + IL P+
Sbjct 507 GQITALLGHSGTGKSTLMNILCGLCPPS 534
> hsa:23460 ABCA6, EST155051, FLJ43498; ATP-binding cassette,
sub-family A (ABC1), member 6; K05649 ATP-binding cassette,
subfamily A (ABC1), member 6
Length=1617
Score = 35.8 bits (81), Expect = 0.076, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 22/27 (81%), Gaps = 0/27 (0%)
Query 151 GQVLGLVGTNGTGKSTALKILSAKLKP 177
G++LGL+G NG GKS++++++S KP
Sbjct 1313 GEILGLLGPNGAGKSSSIRMISGITKP 1339
> dre:571189 abcb11b; ATP-binding cassette, sub-family B (MDR/TAP),
member 11b; K05664 ATP-binding cassette, subfamily B (MDR/TAP),
member 11
Length=1297
Score = 35.8 bits (81), Expect = 0.078, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 0/30 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKPN 178
+PGQ L VG++G GKST++++L PN
Sbjct 1080 KPGQTLAFVGSSGCGKSTSVQLLERFYDPN 1109
> eco:b0151 fhuC, ECK0150, JW0147; iron-hydroxamate transporter
subunit; K02013 iron complex transport system ATP-binding
protein [EC:3.6.3.34]
Length=265
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query 137 PNQFKLHRLPVPRP-GQVLGLVGTNGTGKSTALKIL 171
P + LH L + P G+V GL+G NG+GKST LK+L
Sbjct 22 PGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKML 57
> mmu:11304 Abca4, AW050280, Abc10, Abcr, D430003I15Rik, RmP;
ATP-binding cassette, sub-family A (ABC1), member 4; K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Length=2310
Score = 35.8 bits (81), Expect = 0.085, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 0/25 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSA 173
RPG+ GL+G NG GK+T K+L+
Sbjct 1962 RPGECFGLLGVNGAGKTTTFKMLTG 1986
> hsa:24 ABCA4, ABC10, ABCR, ARMD2, CORD3, DKFZp781N1972, FFM,
FLJ17534, RMP, RP19, STGD, STGD1; ATP-binding cassette, sub-family
A (ABC1), member 4; K05644 ATP-binding cassette, subfamily
A (ABC1), member 4
Length=2273
Score = 35.8 bits (81), Expect = 0.085, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 0/25 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSA 173
RPG+ GL+G NG GK+T K+L+
Sbjct 1963 RPGECFGLLGVNGAGKTTTFKMLTG 1987
> eco:b1290 sapF, ECK1285, JW1283; antimicrobial peptide transport
ABC system ATP-binding protein; K02032 peptide/nickel transport
system ATP-binding protein
Length=268
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 0/30 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKPN 178
R GQ L ++G NG+GKST K+L+ ++P
Sbjct 38 REGQTLAIIGENGSGKSTLAKMLAGMIEPT 67
> eco:b1900 araG, ECK1898, JW1888; fused L-arabinose transporter
subunits of ABC superfamily: ATP-binding components; K10539
L-arabinose transport system ATP-binding protein [EC:3.6.3.17]
Length=504
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 151 GQVLGLVGTNGTGKSTALKILSAKLKPN 178
GQV L+G NG GKST LKILS P
Sbjct 33 GQVHALMGENGAGKSTLLKILSGNYAPT 60
> ath:AT2G13610 ABC transporter family protein
Length=649
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 23/29 (79%), Gaps = 0/29 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKP 177
+P ++L +VG +G GKS+ L+IL+A+L P
Sbjct 71 KPWEILAIVGPSGAGKSSLLEILAARLIP 99
> eco:b3749 rbsA, ECK3743, JW3728, rbsP, rbsT; fused D-ribose
transporter subunits of ABC superfamily: ATP-binding components;
K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
Length=501
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 0/24 (0%)
Query 150 PGQVLGLVGTNGTGKSTALKILSA 173
PG+V+ LVG NG GKST +K+L+
Sbjct 29 PGRVMALVGENGAGKSTMMKVLTG 52
> dre:100151075 abca5, MGC163009, zgc:163009; ATP-binding cassette,
sub-family A (ABC1), member 5; K05648 ATP-binding cassette,
subfamily A (ABC1), member 5
Length=1654
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 0/25 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSA 173
R G+VLGL+G NG GKST + +LS
Sbjct 1324 RKGEVLGLLGPNGAGKSTIMHMLSG 1348
> dre:100333927 ABC transporter-related protein-like
Length=541
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query 144 RLPVPRPGQVLGLVGTNGTGKSTALKILSAKLKPN 178
+LP PG ++G++G NG GKST +I++ + P+
Sbjct 331 KLP---PGGIVGVIGPNGAGKSTLFRIITGQETPD 362
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 0/24 (0%)
Query 150 PGQVLGLVGTNGTGKSTALKILSA 173
P +G++G NG GKST LKI++
Sbjct 23 PDAKIGILGPNGAGKSTVLKIMAG 46
> ath:AT3G21090 ABC transporter family protein
Length=691
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query 136 GPNQFKLHRLP-VPRPGQVLGLVGTNGTGKSTALKILSAKLKPNL 179
GP + L RL PG+++ ++G +G+GKST L L+ +L N+
Sbjct 40 GPTRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNV 84
> sce:YCR011C ADP1; Adp1p
Length=1049
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 0/30 (0%)
Query 147 VPRPGQVLGLVGTNGTGKSTALKILSAKLK 176
+ +PGQ+L ++G +G GK+T L IL+ K K
Sbjct 412 IVKPGQILAIMGGSGAGKTTLLDILAMKRK 441
> hsa:6891 TAP2, ABC18, ABCB3, APT2, D6S217E, PSF2, RING11; transporter
2, ATP-binding cassette, sub-family B (MDR/TAP); K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3
Length=703
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKP 177
RPG+V LVG NG+GKST +L +P
Sbjct 494 RPGEVTALVGPNGSGKSTVAALLQNLYQP 522
> mmu:217265 Abca5, ABC13, B930033A02Rik, mKIAA1888; ATP-binding
cassette, sub-family A (ABC1), member 5; K05648 ATP-binding
cassette, subfamily A (ABC1), member 5
Length=1642
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query 104 IGCGICVKKCPFSAIQIINLPRDLGAEVAHRYGPNQFKLHRLPVP---RPGQVLGLVGTN 160
+GC C +K AI + NL ++ + + K+ + + G++LGL+G N
Sbjct 1279 MGCQCCEEK---PAIMVCNLHKEYDDKKDFLHSRKTTKVATKYISFCVKKGEILGLLGPN 1335
Query 161 GTGKSTALKILSAKLKP 177
G GKST + L ++P
Sbjct 1336 GAGKSTVINTLVGDVEP 1352
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 151 GQVLGLVGTNGTGKSTALKILSAKLKPN 178
GQ+ L+G +GTGKST + IL P+
Sbjct 507 GQITALLGHSGTGKSTLMNILCGLCPPS 534
> ath:AT5G09930 ATGCN2; ATGCN2; transporter
Length=678
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 23/30 (76%), Gaps = 0/30 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKPN 178
+ G+ +GL+G NG GK+T L+I++ + +P+
Sbjct 107 KKGEKVGLIGVNGAGKTTQLRIITGQEEPD 136
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query 140 FKLHRLPVPRPGQVLGLVGTNGTGKSTALKILSAKLKP 177
F L + R G+ + ++G NG GKST LK++ KP
Sbjct 426 FNKANLAIER-GEKVAIIGPNGCGKSTLLKLIMGLEKP 462
> mmu:11303 Abca1, Abc1; ATP-binding cassette, sub-family A (ABC1),
member 1; K05641 ATP-binding cassette, subfamily A (ABC1),
member 1
Length=2261
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 0/24 (0%)
Query 150 PGQVLGLVGTNGTGKSTALKILSA 173
PG+ GL+G NG GKST K+L+
Sbjct 1938 PGECFGLLGVNGAGKSTTFKMLTG 1961
> hsa:6890 TAP1, ABC17, ABCB2, APT1, D6S114E, FLJ26666, FLJ41500,
PSF1, RING4, TAP1*0102N, TAP1N; transporter 1, ATP-binding
cassette, sub-family B (MDR/TAP); K05653 ATP-binding cassette,
subfamily B (MDR/TAP), member 2
Length=808
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 149 RPGQVLGLVGTNGTGKSTALKILSAKLKP 177
RPG+V LVG NG+GKST +L +P
Sbjct 589 RPGEVTALVGPNGSGKSTVAALLQNLYQP 617
> ath:AT5G52860 ABC transporter family protein
Length=589
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query 137 PNQFKLHRLPV-PRPGQVLGLVGTNGTGKSTALKILSAKLKP 177
P F L + + P ++L +VG +G GKST L IL++K P
Sbjct 40 PPSFILRNITLTAHPTEILAVVGPSGAGKSTLLDILASKTSP 81
> cel:Y42G9A.6 wht-7; WHiTe (Drosophila) related ABC transporte
family member (wht-7)
Length=684
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 0/33 (0%)
Query 147 VPRPGQVLGLVGTNGTGKSTALKILSAKLKPNL 179
V RPG+V ++G +G GK+T L +L+ + NL
Sbjct 88 VARPGEVTAIIGPSGAGKTTLLNVLTKRNLSNL 120
Lambda K H
0.319 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 4795148792
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40