bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_3253_orf1
Length=281
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_066880 dihydrouridine synthase domain-containing pr... 264 3e-70
pfa:PFI0920c dihydrouridine synthase, putative; K05539 tRNA-di... 249 9e-66
tpv:TP01_0028 tRNA-dihydrouridine synthase A; K05539 tRNA-dihy... 218 2e-56
bbo:BBOV_I002610 19.m02130; dihydrouridine synthase (Dus) doma... 198 2e-50
eco:b4049 dusA, ECK4041, JW5950, yjbN; tRNA-dihydrouridine syn... 176 9e-44
ath:AT3G63510 FAD binding / catalytic/ tRNA dihydrouridine syn... 163 8e-40
cpv:cgd2_3570 YjbN-like Dus1p tRNA dihydouriding synthase Tim ... 153 8e-37
ath:AT5G47970 nitrogen regulation family protein; K05539 tRNA-... 149 1e-35
tgo:TGME49_072570 hypothetical protein 65.1 3e-10
ath:AT3G49640 FAD binding / catalytic/ tRNA dihydrouridine syn... 57.4 6e-08
bbo:BBOV_IV004780 23.m05837; dihydrouridine synthase; K05542 t... 55.5 2e-07
eco:b2140 dusC, ECK2133, JW2128, yohI; tRNA-dihydrouridine syn... 55.5 2e-07
sce:YNR015W SMM1, DUS2; Dihydrouridine synthase, member of a f... 54.3 4e-07
tgo:TGME49_080780 dihydrouridine synthase domain-containing pr... 54.3 5e-07
ath:AT5G67220 nitrogen regulation family protein; K05545 tRNA-... 53.9 6e-07
eco:b3260 dusB, ECK3247, JW3228, yhdG; tRNA-dihydrouridine syn... 53.1 1e-06
cel:Y54E5A.6 hypothetical protein; K05543 tRNA-dihydrouridine ... 52.4 2e-06
hsa:54920 DUS2L, DUS2, FLJ20399, SMM1, URLC8; dihydrouridine s... 49.3 2e-05
sce:YML080W DUS1; Dihydrouridine synthase, member of a widespr... 49.3 2e-05
hsa:56931 DUS3L, DUS3, FLJ13896; dihydrouridine synthase 3-lik... 48.1 3e-05
tgo:TGME49_028080 hypothetical protein ; K05544 tRNA-dihydrour... 48.1 4e-05
dre:100003049 dus2l; dihydrouridine synthase 2-like, SMM1 homo... 47.4 5e-05
mmu:66369 Dus2l, 2310016K04Rik; dihydrouridine synthase 2-like... 47.0 7e-05
xla:446385 dus1l, MGC83715; dihydrouridine synthase 1-like; K0... 45.8 2e-04
pfa:PF14_0086 tRNA-dihydrouridine synthase, putative; K05545 t... 45.8 2e-04
tpv:TP01_0269 hypothetical protein; K05545 tRNA-dihydrouridine... 45.1 3e-04
cel:C45G9.2 hypothetical protein; K05545 tRNA-dihydrouridine s... 45.1 3e-04
mmu:68730 Dus1l, 1110032N12Rik; dihydrouridine synthase 1-like... 45.1 3e-04
ath:AT4G38890 dihydrouridine synthase family protein; K05544 t... 44.3 5e-04
dre:445096 dus4l, zgc:92033; dihydrouridine synthase 4-like (S... 44.3 5e-04
tgo:TGME49_002790 dihydrouridine synthase domain-containing pr... 43.5 8e-04
xla:432319 MGC132093; hypothetical protein MGC78973; K05542 tR... 43.1 0.001
hsa:64118 DUS1L, DUS1, PP3111; dihydrouridine synthase 1-like ... 43.1 0.001
xla:379349 dus3l, MGC53781; dihydrouridine synthase 3-like; K0... 42.7 0.001
dre:393647 MGC63779; zgc:63779; K05544 tRNA-dihydrouridine syn... 42.0 0.003
mmu:224907 Dus3l, AI662135, AW557805, MGC56820; dihydrouridine... 42.0 0.003
cel:F36A2.2 hypothetical protein; K05542 tRNA-dihydrouridine s... 42.0 0.003
dre:322715 dus1l, wu:fb71f06, zgc:63748; dihydrouridine syntha... 40.4 0.007
dre:100330185 dihydrouridine synthase 1-like (S. cerevisiae)-l... 40.4 0.007
hsa:11062 DUS4L, DUS4, MGC133233, PP35; dihydrouridine synthas... 38.1 0.033
mmu:71916 Dus4l, 2310069P03Rik, 2700089B10Rik, AI482040, MGC13... 38.1 0.038
cel:Y37E11B.5 hypothetical protein; K05544 tRNA-dihydrouridine... 37.4 0.060
xla:734320 dus4l; dihydrouridine synthase 4-like; K05545 tRNA-... 37.0 0.092
sce:YLR401C DUS3; Dihydrouridine synthase, member of a widespr... 35.8 0.18
hsa:1806 DPYD, DHP, DHPDHASE, DPD, MGC132008, MGC70799; dihydr... 34.7 0.40
mmu:99586 Dpyd, AI315208, DPD, E330028L06Rik, MGC37940; dihydr... 33.1 1.3
cel:C25F6.3 dpyd-1; DihydroPYrimidine Dehydrogenase family mem... 32.0 2.5
mmu:229687 Chi3l7, Bclp, Bclp1, Bclp2, MGC156874; chitinase 3-... 31.6 3.0
xla:447312 dpyd, MGC81821, dhp, dhpdhase, dpd; dihydropyrimidi... 31.2 4.5
dre:556707 hypothetical LOC556707 30.8 6.0
> tgo:TGME49_066880 dihydrouridine synthase domain-containing
protein (EC:1.3.1.2); K05539 tRNA-dihydrouridine synthase A
[EC:1.-.-.-]
Length=394
Score = 264 bits (675), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/260 (53%), Positives = 177/260 (68%), Gaps = 15/260 (5%)
Query 25 VCRFFLSGGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRD 84
VC+ GGS+P+ +AEA E G+DE+NLNVGCPS RVV +G FGAALM++P VRD
Sbjct 72 VCQL---GGSDPKTLAEAGKLIEKLGFDEINLNVGCPSNRVVSQGCFGAALMKTPETVRD 128
Query 85 IVYEMKRRVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPK 144
IV+E++R VQIPVTVK R+G D+ DS + + FV+TVS GGC+HFIVHARKAWL+GVDPK
Sbjct 129 IVHEIRRHVQIPVTVKTRIGYDHCDSRDVLRNFVQTVSAGGCRHFIVHARKAWLKGVDPK 188
Query 145 KNRSVPPLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKGEWKAGDTAEAKDPQIPD 204
KNRSVPPLLY RV++L + FP L FSLNGGV +++ A L G+W G TAE D
Sbjct 189 KNRSVPPLLYGRVYDLCDQFPHLDFSLNGGVRSIQQAIDLAAGKWTDG-TAEM------D 241
Query 205 A---DVTNGSQYSGLYGVMIGRAAMNDPCCLAQADKLIYGSRENPESAQCRRSLLLAYID 261
A +T L GVM+GRAA DPC LA D YG+ NP ++ RR++L AY +
Sbjct 242 ALLRRITRDKTVKPLRGVMLGRAASADPCILANVDTDFYGADANPPTSHSRRTVLEAYRN 301
Query 262 YLERYEARHRKQKSPFVLLK 281
Y++ + + S F LLK
Sbjct 302 YIKPFA--EDGEYSHFALLK 319
> pfa:PFI0920c dihydrouridine synthase, putative; K05539 tRNA-dihydrouridine
synthase A [EC:1.-.-.-]
Length=577
Score = 249 bits (636), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 179/264 (67%), Gaps = 18/264 (6%)
Query 25 VCRFFLSGGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRD 84
VC+ GG + +++EAA E AGYDE+N+NVGCPS +V +KG+FGA+LM++P +VR+
Sbjct 257 VCQL---GGCDMNSMSEAAILVEQAGYDEININVGCPSTKVANKGAFGASLMKNPEQVRN 313
Query 85 IVYEMKRRVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPK 144
IVYE+K++VQIPVTVK R GVDN DS +F K F+ETVS GC HFIVHARKAWL+G+DPK
Sbjct 314 IVYEIKKKVQIPVTVKIRTGVDNYDSFDFLKTFIETVSSVGCNHFIVHARKAWLKGLDPK 373
Query 145 KNRSVPPLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKG---EWKAGDTAEAKDP- 200
+NR +PPL Y++V++L + +P L F+LNGG+ T++ A LL G E + D
Sbjct 374 QNRKIPPLEYYKVYDLCKLYPHLKFTLNGGIQTIQEAIALLNGYMPENYNNNNNNNNDTS 433
Query 201 ---QIPDADVTNGSQYSGLYGVMIGRAAMNDPCCLAQADKLIYGSRENPESAQCRRSLLL 257
QI + ++ + L G+MIGRA M + L+Q DKL+Y +++ P +A RR++L
Sbjct 434 NFIQIDNYNI------NPLNGIMIGRACMENITVLSQTDKLVY-NQDIPSTAYSRRTILE 486
Query 258 AYIDYLERYEARHRKQKSPFVLLK 281
AY YLE+ + S F LLK
Sbjct 487 AYKKYLEK-NSLFYNLSSSFELLK 509
> tpv:TP01_0028 tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine
synthase A [EC:1.-.-.-]
Length=471
Score = 218 bits (555), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 147/245 (60%), Gaps = 30/245 (12%)
Query 32 GGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKG------------SFGAALMRSP 79
GG+ P+ + EA + GYDE+NLN GCPS RV KG FGA+LM+
Sbjct 168 GGNCPETLVEAGRILKKFGYDEINLNAGCPSPRVSGKGIYKFMLKLFNLGCFGASLMKEK 227
Query 80 TKVRDIVYEMKRRVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQ 139
VRDI + M R +++PVTVK RLGVD DS EF + FV TVS+ GC HFI+H+RKAWL+
Sbjct 228 ELVRDIAHHMLRELEMPVTVKTRLGVDEFDSYEFVRDFVSTVSESGCDHFIIHSRKAWLK 287
Query 140 GVDPKKNRSVPPLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKGEWKAGDTAEAKD 199
G++PK+NR++PPL Y +V+ LQ FP L F++NGG T+E + L E
Sbjct 288 GINPKQNRTIPPLQYEKVYRLQRDFPHLKFTINGGFKTMESILEALNSE----------- 336
Query 200 PQIPDADVTNGSQYSGLYGVMIGRAAMNDPCCLAQADKLIYGSRENPESAQCRRSLLLAY 259
+ D N L GVMIGR A +PC L+ DKLIYG ENP++ RR LL Y
Sbjct 337 ----NLDSNNNPH--KLNGVMIGRLAYENPCLLSNVDKLIYGV-ENPDTCYTRRILLENY 389
Query 260 IDYLE 264
+Y++
Sbjct 390 ANYID 394
> bbo:BBOV_I002610 19.m02130; dihydrouridine synthase (Dus) domain
containing protein; K05539 tRNA-dihydrouridine synthase
A [EC:1.-.-.-]
Length=362
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 138/238 (57%), Gaps = 27/238 (11%)
Query 32 GGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKR 91
GG+N ++++A A GY E NLNVGCPS RV KG FGAALM V IV ++
Sbjct 80 GGNNLDSLSKAGNIALGYGYTEFNLNVGCPSTRVSGKGCFGAALMNDAPLVGRIVKHLRS 139
Query 92 RVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPKKNRSVPP 151
+ PVTVK RLGVD+ DS EF + F+ TV+ GC FIVHARKAWL G++P+KNRS+PP
Sbjct 140 ELGTPVTVKHRLGVDHNDSYEFVRDFISTVADQGCTDFIVHARKAWLNGINPRKNRSIPP 199
Query 152 LLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKGEWKAGDTAEAKDPQIPDADVTNGS 211
L + RV+ L + FP L+ S+NGG+ +LE + L
Sbjct 200 LDHERVYRLCQEFPNLNISINGGIKSLEEIKYALS------------------------- 234
Query 212 QYSGLYGVMIGRAAMNDPCCLAQADKLIYGSRENPESAQCRRSLLLAYIDYLERYEAR 269
G+YGVM+GR A +PC L + D IYG NP + + RR LL Y ++++ +R
Sbjct 235 --RGVYGVMVGRMAYENPCGLVRVDTDIYGEATNPATCKTRRILLETYANFIDSQASR 290
> eco:b4049 dusA, ECK4041, JW5950, yjbN; tRNA-dihydrouridine synthase
A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Length=330
Score = 176 bits (446), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 127/215 (59%), Gaps = 30/215 (13%)
Query 32 GGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKR 91
GGS+P +A+ A AE GYDE+NLNVGCPS RV G FGA LM + V D V M+
Sbjct 71 GGSDPAALAQCAKLAEARGYDEINLNVGCPSDRV-QNGMFGACLMGNAQLVADCVKAMRD 129
Query 92 RVQIPVTVKCRLGVDNLDSPEFTKQFVETVS-QGGCKHFIVHARKAWLQGVDPKKNRSVP 150
V IPVTVK R+G+D+ DS EF F+ TVS +G C+ FI+HARKAWL G+ PK+NR +P
Sbjct 130 VVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIP 189
Query 151 PLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKGEWKAGDTAEAKDPQIPDADVTNG 210
PL Y RV++L+ FP L S+NGG+ +LE A+ L+
Sbjct 190 PLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQ------------------------ 225
Query 211 SQYSGLYGVMIGRAAMNDPCCLAQADKLIYGSREN 245
+ GVM+GR A +P LA D+ I+GS +
Sbjct 226 ----HMDGVMVGREAYQNPGILAAVDREIFGSSDT 256
> ath:AT3G63510 FAD binding / catalytic/ tRNA dihydrouridine synthase
Length=386
Score = 163 bits (412), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 126/241 (52%), Gaps = 32/241 (13%)
Query 32 GGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKR 91
GGSN +N+A+AA ++ GYDE+NLN GCPS +V G FG +LM P V + + +
Sbjct 82 GGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEAMSAIAA 141
Query 92 RVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQ-GGCKHFIVHARKAWLQGVDPKKNRSVP 150
+PVTVKCR+GVDN DS + F+ VS +HFIVH+RKA L G+ P NR +P
Sbjct 142 NTNVPVTVKCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSRKALLGGISPADNRRIP 201
Query 151 PLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKGEWKAGDTAEAKDPQIPDADVTNG 210
PL Y + L FP+L F++NGG+T++ LK
Sbjct 202 PLKYEYYYALVRDFPDLRFTINGGITSVSKVNAALK------------------------ 237
Query 211 SQYSGLYGVMIGRAAMNDPC-CLAQADKLIYGSRENPESAQCRRSLLLAYIDYLERYEAR 269
G +GVM+GRAA N+P L Q D +YG P S RR +L Y Y +
Sbjct 238 ---EGAHGVMVGRAAYNNPWQTLGQVDTAVYGV---PSSGLTRRQVLEQYQVYGDSVLGT 291
Query 270 H 270
H
Sbjct 292 H 292
> cpv:cgd2_3570 YjbN-like Dus1p tRNA dihydouriding synthase Tim
barrel ; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Length=519
Score = 153 bits (386), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 151/354 (42%), Gaps = 106/354 (29%)
Query 32 GGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKR 91
GG+NPQ + +A A G+ NLNVGCPSC+V KGSFGA+L ++P +V IV +
Sbjct 96 GGNNPQKMEKAIEIAYKYGFQNFNLNVGCPSCKVASKGSFGASLFKNPLRVAKIVDTCNK 155
Query 92 R------VQIPVTVKCRLGVDNLDSPEFTKQFVETVSQG--------------------- 124
+ V ++VK R+GVD D+ + F+ VS
Sbjct 156 KLIHLGLVNKRISVKTRIGVDQYDTYQHLYNFISLVSGCNINNQNKKDYSCIFPQSDDDS 215
Query 125 ----------------GCKHFIVHARKAWLQGVDPKKNRSVPPLLYHRVFELQEAFPELH 168
G FI+HARKAWL G++P KNR++P L Y+ V+ L FP L
Sbjct 216 DSNILESIDYTENNFIGANVFIIHARKAWLNGINPSKNRTIPKLKYYWVYMLTLDFPNLT 275
Query 169 FSLNGGVTTLELAQQLLKGEW--------------------------KAGDTAEAKDPQI 202
F LNGGVT+++ +L G+W K T KD
Sbjct 276 FILNGGVTSIQECISILTGDWYIQWYLNNYKDDIKDNELEINNYTKIKKIRTDHLKDDHH 335
Query 203 PDADVTNG-----SQYSGLY-------------GVMIGRAAMNDPCCLAQADKLIYGSRE 244
+ +N +Y LY GVMIGR MN+P L++ D +IYG
Sbjct 336 IETLSSNSYLTLTQEYQNLYQIIQSGKWINKIKGVMIGREVMNNPFILSKVDSMIYGINY 395
Query 245 NPESAQ-------------------CRRSLLLAYIDYLERYEARHRKQKSPFVL 279
N + RR +L Y++YL +++ R+ K + F +
Sbjct 396 NQVNNNNNNNNNCINTNGNNSSIHLTRRIVLERYVEYLSKFKPRNIKDQGQFTI 449
> ath:AT5G47970 nitrogen regulation family protein; K05539 tRNA-dihydrouridine
synthase A [EC:1.-.-.-]
Length=387
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 122/245 (49%), Gaps = 32/245 (13%)
Query 32 GGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKR 91
GG N +N+A+A A YDE+N N GCPS +V +G FGA LM P V + + +
Sbjct 73 GGRNLENLAKATRLANAYAYDEINFNCGCPSPKVSGRGCFGALLMLDPKFVGEAMSVIAA 132
Query 92 RVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQ-GGCKHFIVHARKAWLQGVDPKKNRSVP 150
VTVKCR+GVD+ DS F+ VS KHFI+H+RKA L G+ P NR +P
Sbjct 133 NTNAAVTVKCRIGVDDHDSYNELCDFIHIVSSLSPTKHFIIHSRKALLSGLSPSDNRRIP 192
Query 151 PLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKGEWKAGDTAEAKDPQIPDADVTNG 210
PL Y F L FP+L F++NGG+ ++ A L+
Sbjct 193 PLKYEFFFALLRDFPDLKFTINGGINSVVEADAALR------------------------ 228
Query 211 SQYSGLYGVMIGRAAMNDPC-CLAQADKLIYGSRENPESAQCRRSLLLAYIDYLERYEAR 269
SG +GVM+GRA +P L D ++YGS P S RR +L Y Y E +
Sbjct 229 ---SGAHGVMLGRAVYYNPWHILGHVDTVVYGS---PSSGITRRQVLEKYKLYGESVLGK 282
Query 270 HRKQK 274
+ K +
Sbjct 283 YGKGR 287
> tgo:TGME49_072570 hypothetical protein
Length=668
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 80/195 (41%), Gaps = 67/195 (34%)
Query 54 VNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVY---------EMKRRVQ---------- 94
VNLN GCPS RV KGSFG LM P +V ++ E ++R
Sbjct 213 VNLNCGCPSPRVA-KGSFGLILMEDPKRVAEMCQILVDGANNREGQKRCSLDVMGKSARG 271
Query 95 -----------------IPVTVKCRLGVD-------NLDSP------------------- 111
+ V+VKCR+G++ + SP
Sbjct 272 DTKDRTVHTNDSPETDSVAVSVKCRVGIEEDKQFLRSGSSPISSATTPYSSSSCTYDKLA 331
Query 112 EFTKQFVETVSQGGCKHFIVHARKAWLQG-VDPKKNRSVPPLLYHRVFELQEAFPELHFS 170
EF VET +HFI+HAR L G + PK+N +P V+ L FP + F+
Sbjct 332 EFVGTVVET---SPVRHFIIHARPGILVGKLSPKQNLQIPQRRPEWVYRLCSDFPTVSFT 388
Query 171 LNGGVTTLELAQQLL 185
NGGV + + A++ L
Sbjct 389 FNGGVKSFQNAEEHL 403
> ath:AT3G49640 FAD binding / catalytic/ tRNA dihydrouridine synthase;
K05543 tRNA-dihydrouridine synthase 2 [EC:1.-.-.-]
Length=290
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query 54 VNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQIPVTVKCRLGVDNLDSPEF 113
+++N+GCP + +G GAAL+ P + DI+ +KR + +PVT K RL L SP
Sbjct 65 IDINMGCPKAFSI-QGGMGAALLSKPELIHDILATLKRNLDVPVTCKIRL----LKSPAD 119
Query 114 TKQFVETVSQGGCKHFIVHARKAWLQGVDPKK 145
T + + + G VH RK + DP K
Sbjct 120 TVELARRIEKLGVPALAVHGRKIADRPRDPAK 151
> bbo:BBOV_IV004780 23.m05837; dihydrouridine synthase; K05542
tRNA-dihydrouridine synthase 1 [EC:1.-.-.-]
Length=355
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 21/215 (9%)
Query 33 GSNPQNVAEAATWAELAGY-DEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKR 91
G + + +AA L G+ V+LN+GCP + G +G+ L+ P V IV + R
Sbjct 75 GDDAGTITQAARL--LKGHVSAVDLNLGCPQA-IAKDGHYGSFLLDEPDLVTGIVSRVTR 131
Query 92 RVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPKKNRSVPP 151
V I VT K R VD DS + T ++ Q GCK VH R +G N
Sbjct 132 EVGIAVTCKIR-KVDK-DSLQSTLNLCYSLEQSGCKALTVHGRHRSEKGT----NVGAAD 185
Query 152 LLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKGEWKAGDTAEAKDPQIPDADVTNGS 211
R+ + + P + NGG+ T ++ L + D + + + + +G
Sbjct 186 WDAIRIIKSRLRIPVI---ANGGIETFADVERCLS--YTGADAVMSSESLLERPYLFSGI 240
Query 212 QYSGL-----YGVMIGRAAMNDPCCL-AQADKLIY 240
Y L Y ++ R PCC+ A K+++
Sbjct 241 TYDHLDIMDEYLGIVRRYPDQSPCCIRGHAFKILF 275
> eco:b2140 dusC, ECK2133, JW2128, yohI; tRNA-dihydrouridine synthase
C; K05541 tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Length=315
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 16/143 (11%)
Query 33 GSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRR 92
G PQ +AE A A G V+LN GCPS + V+ GA L++ P + M+
Sbjct 71 GQFPQWLAENAARAVELGSWGVDLNCGCPS-KTVNGSGGGATLLKDPELIYQGAKAMREA 129
Query 93 V--QIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKA----------WLQG 140
V +PV+VK RLG DS E + + V Q G +VH R W
Sbjct 130 VPAHLPVSVKVRLG---WDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAI 186
Query 141 VDPKKNRSVPPLLYHRVFELQEA 163
D ++ ++P + +++ Q A
Sbjct 187 GDIRQRLNIPVIANGEIWDWQSA 209
> sce:YNR015W SMM1, DUS2; Dihydrouridine synthase, member of a
family of dihydrouridine synthases including Dus1p, Smm1p,
Dus3p, and Dus4p; modifies uridine residues at position 20 of
cytoplasmic tRNAs (EC:1.-.-.-); K05543 tRNA-dihydrouridine
synthase 2 [EC:1.-.-.-]
Length=384
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 23/210 (10%)
Query 6 SRIRVRARLEESTTWKRYRVCRFFLSGGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRV 65
S+++ R T+ + + GS +A A + +++N GCP
Sbjct 63 SKVQTRPETLVFRTYPKLESSKLIFQIGSASPALATQAALKVINDVSGIDINAGCPKHFS 122
Query 66 VDKGSFGAALMRSPTKVRDIVYEMKRRV----QIPVTVKCRLGVDNLDSPEFTKQFVETV 121
+ G G+AL+R+P + I+ E+ + V P++VK RL LD+ + T Q V+ +
Sbjct 123 IHSG-MGSALLRTPDTLCLILKELVKNVGNPHSKPISVKIRL----LDTKQDTLQLVKRL 177
Query 122 SQGGCKHFIVHARKAWLQGVDPKKNRSVPPLLY-HRVFELQEAFPELHFSLNGGVTTLEL 180
G + VH RK + +NR P Y ++E+ +A + +NG +
Sbjct 178 CATGITNLTVHCRKTEM------RNREQPITDYIAEIYEICQA-NNVSLIVNGAIRDRSH 230
Query 181 AQQLLKGEWK----AGDTAEA--KDPQIPD 204
L WK G AE +DP + D
Sbjct 231 FHDLQANHWKNTNIGGMIAECAERDPTVFD 260
> tgo:TGME49_080780 dihydrouridine synthase domain-containing
protein ; K05543 tRNA-dihydrouridine synthase 2 [EC:1.-.-.-]
Length=653
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query 54 VNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQIPVTVKCRLGVDNLDSPEF 113
V++N+GCP ++ G GAAL+++P DI+ ++R + IPVT K RL LD+
Sbjct 353 VDVNMGCPKSFSIN-GGMGAALLKTPLIATDILKTLRRNLDIPVTCKIRL----LDTIHK 407
Query 114 TKQFVETVSQGGCKHFIVHARK 135
T F G + +HAR+
Sbjct 408 TIDFARLCENCGIEAIAIHARE 429
> ath:AT5G67220 nitrogen regulation family protein; K05545 tRNA-dihydrouridine
synthase 4 [EC:1.-.-.-]
Length=423
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query 11 RARLEESTTWKRYRVCRFFLSGGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGS 70
+ R +E TT K R F ++P + EAA E D V++N+GCP R+ +G+
Sbjct 130 KYRNQEFTTCKEDRPL-FVQFCANDPDTLLEAAKRVE-PYCDYVDINLGCPQ-RIARRGN 186
Query 71 FGAALMRSPTKVRDIVYEMKRRVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFI 130
+GA LM + V+ +V ++ + + +PV+ K R+ NL E T ++ + + GC
Sbjct 187 YGAFLMDNLPLVKSLVEKLAQNLNVPVSCKIRI-FPNL---EDTLKYAKMLEDAGCSLLA 242
Query 131 VHAR 134
VH R
Sbjct 243 VHGR 246
> eco:b3260 dusB, ECK3247, JW3228, yhdG; tRNA-dihydrouridine synthase
B; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Length=321
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query 32 GGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKR 91
GS+P+ +A+AA +G +++N+GCP+ + V++ G+AL++ P V+ I+ E+
Sbjct 72 AGSDPKEMADAARINVESGAQIIDINMGCPA-KKVNRKLAGSALLQYPDVVKSILTEVVN 130
Query 92 RVQIPVTVKCRLGVDNLDSPEF--TKQFVETVSQGGCKHFIVHAR 134
V +PVT+K R G +PE ++ + G + +H R
Sbjct 131 AVDVPVTLKIRTGW----APEHRNCEEIAQLAEDCGIQALTIHGR 171
> cel:Y54E5A.6 hypothetical protein; K05543 tRNA-dihydrouridine
synthase 2 [EC:1.-.-.-]
Length=436
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query 27 RFFLSGGSNPQNVAEAATWAELAGYD--EVNLNVGCPSCRVVDKGSFGAALMRSPTKVRD 84
R L G+N +AA A++ G D +++N+GCP + G GAAL+ K+ D
Sbjct 77 RCILQIGTNSGE--KAAKIAQIVGDDVAGIDVNMGCPKPFSIHCG-MGAALLTQTEKIVD 133
Query 85 IVYEMKRRVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARK 135
I+ +K ++PVT K R+ LD PE T + V+ + + VH R+
Sbjct 134 ILTSLKSAAKVPVTCKIRV----LDDPEDTLKLVQEIEKCRVSALGVHGRR 180
> hsa:54920 DUS2L, DUS2, FLJ20399, SMM1, URLC8; dihydrouridine
synthase 2-like, SMM1 homolog (S. cerevisiae); K05543 tRNA-dihydrouridine
synthase 2 [EC:1.-.-.-]
Length=493
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query 23 YRVCR------FFLSGGSNPQNVAEAATWAE--LAGYDEVNLNVGCPSCRVVDKGSFGAA 74
+R C F G S+ + A E +AG D +N+GCP + KG GAA
Sbjct 74 FRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGID---VNMGCPK-QYSTKGGMGAA 129
Query 75 LMRSPTKVRDIVYEMKRRVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHAR 134
L+ P K+ I+ + + + PVT K R+ L S E T V+ + + G VH R
Sbjct 130 LLSDPDKIEKILSTLVKGTRRPVTCKIRI----LPSLEDTLSLVKRIERTGIAAIAVHGR 185
Query 135 K 135
K
Sbjct 186 K 186
> sce:YML080W DUS1; Dihydrouridine synthase, member of a widespread
family of conserved proteins including Smm1p, Dus3p, and
Dus4p; modifies pre-tRNA(Phe) at U17 (EC:1.-.-.-); K05542
tRNA-dihydrouridine synthase 1 [EC:1.-.-.-]
Length=423
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query 33 GSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRR 92
++P+ + AA E D V+LN+GCP + KG +G+ LM + +++ + +
Sbjct 95 ANDPEYLLAAAKLVE-DKCDAVDLNLGCPQG-IAKKGHYGSFLMEEWDLIHNLINTLHKN 152
Query 93 VQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHAR 134
+++PVT K R+ D E + + + V G + VH R
Sbjct 153 LKVPVTAKIRI----FDDCEKSLNYAKMVLDAGAQFLTVHGR 190
> hsa:56931 DUS3L, DUS3, FLJ13896; dihydrouridine synthase 3-like
(S. cerevisiae); K05544 tRNA-dihydrouridine synthase 3 [EC:1.-.-.-]
Length=408
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
Query 52 DEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQIPVTVKCRLGVD---NL 108
D V++NVGCP V KG G ALM TK + IV M + + +P+TVK R GV NL
Sbjct 146 DFVDINVGCPIDLVYKKGG-GCALMNRSTKFQQIVRGMNQVLDVPLTVKIRTGVQERVNL 204
Query 109 DS---PEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPKKNRSVPPLLYHRVFELQEAFP 165
PE V V+ G + + A Q ++ + P L+ L +F
Sbjct 205 AHRLLPELRDWGVALVTLHGRSREQRYTKLADWQYIEECVQAASPMPLFGNGDIL--SFE 262
Query 166 ELHFSLNGGVTTLELAQQLLKGEWKAGDTAEAKDPQIPDAD 206
+ + ++ GVT + +A+ L W + E + I ++
Sbjct 263 DANRAMQTGVTGIMIARGALLKPWLFTEIKEQRHWDISSSE 303
> tgo:TGME49_028080 hypothetical protein ; K05544 tRNA-dihydrouridine
synthase 3 [EC:1.-.-.-]
Length=1220
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query 4 SISRIRVRARLEESTTWKRYRVCRFF---LSGGSNPQ--NVAEAATWAELAGYDEVNLNV 58
++++ V + E + KR++ FF ++GG+ P+ N +E D ++LN
Sbjct 851 AVAKSIVDGKQSELSLLKRHKSETFFGVQIAGGT-PEVLNACTDILASEDVSCDFIDLNA 909
Query 59 GCPSCRVVDKGSFGAALMRSPTKVRDIVYEM-KRRVQIPVTVKCRLGVDNLDSPEFTKQF 117
CP ++ + GA ++ P ++ +V M R ++PVTVK R N + F
Sbjct 910 ACPLVQLHRRFKAGACMLDHPKRLESLVESMTTRHPEVPVTVKLRTA--NQGKKQVLHSF 967
Query 118 VETVSQGGCKHFIVHARKA---WLQGVD--------PKKNRSVPPLLYHRVFELQEAFPE 166
+ + G IVH R A + + D + S P + +F + PE
Sbjct 968 IRRLGDAGAAALIVHGRTAQQRYTKAADWSYVAQCREALDSSTPLIGCGDIF----SSPE 1023
Query 167 LHFSLNGGVTT-LELAQQLLKGEWKAGDTAEAK 198
F L G + L +A+ L W + +E K
Sbjct 1024 FEFRLASGASDGLMIARAALVKPWVFTEISERK 1056
> dre:100003049 dus2l; dihydrouridine synthase 2-like, SMM1 homolog
(S. cerevisiae); K05543 tRNA-dihydrouridine synthase 2
[EC:1.-.-.-]
Length=504
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query 29 FLSGGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYE 88
F G ++P+ A E V++N+GCP KG G+AL+ P K+ I+
Sbjct 91 FQMGTADPERALAVAKLVE-NDVAAVDVNMGCPK-EYSTKGGMGSALLSDPEKIEAILTT 148
Query 89 MKRRVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHAR 134
+ + + PVT K R+ L + E T V+ + + G VH R
Sbjct 149 LVKGISKPVTCKIRI----LSTIEDTVNLVKRIEKTGVAAIAVHGR 190
> mmu:66369 Dus2l, 2310016K04Rik; dihydrouridine synthase 2-like
(SMM1, S. cerevisiae); K05543 tRNA-dihydrouridine synthase
2 [EC:1.-.-.-]
Length=493
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 16/120 (13%)
Query 23 YRVCR------FFLSGGSNPQNVAEAATWAE--LAGYDEVNLNVGCPSCRVVDKGSFGAA 74
+R C F G S+ + A E +AG D +N+GCP KG GAA
Sbjct 74 FRTCEREQSRVVFQMGTSDAERALAVARLVENDVAGID---VNMGCPK-EYSTKGGMGAA 129
Query 75 LMRSPTKVRDIVYEMKRRVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHAR 134
L+ P K+ I+ + + PVT K R+ L S E T V+ + + G VH R
Sbjct 130 LLSDPDKIEKILSTLVKGTHRPVTCKIRI----LPSLEDTLNLVKRIERTGISAIAVHGR 185
> xla:446385 dus1l, MGC83715; dihydrouridine synthase 1-like;
K05542 tRNA-dihydrouridine synthase 1 [EC:1.-.-.-]
Length=464
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query 33 GSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRR 92
++P+ +AA A+ D ++LN+GCP + +G +GA L + ++ ++
Sbjct 76 ANDPEVFVQAALLAQ-DYCDAIDLNLGCPQ-MIAKRGHYGAFLQDEWDLLEKMIQLAHQK 133
Query 93 VQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHAR 134
+ +PVT K R+ E T Q+ + + + GC+ VH R
Sbjct 134 LSVPVTCKIRV----FPEMEKTVQYAKMLEKAGCQLLTVHGR 171
> pfa:PF14_0086 tRNA-dihydrouridine synthase, putative; K05545
tRNA-dihydrouridine synthase 4 [EC:1.-.-.-]
Length=340
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query 33 GSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRR 92
G++ + + EA + + + V++N+GCP ++ KG++GA L+ +V +++ ++
Sbjct 89 GNDSKILLEAINFIK-DDVNAVDINLGCPQ-QIAKKGNYGAFLLHKHDEVVNLISDITNN 146
Query 93 VQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPKK 145
IP+T K R +DN + T + G K VH R +G++ K+
Sbjct 147 CVIPITCKIR-KIDN--DYQKTLNLCYDLQSRGIKMITVHGRTKEEKGINIKQ 196
> tpv:TP01_0269 hypothetical protein; K05545 tRNA-dihydrouridine
synthase 4 [EC:1.-.-.-]
Length=327
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 88/214 (41%), Gaps = 20/214 (9%)
Query 33 GSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRR 92
G++P A+++ + +++N+GCP + KG +G+ L+ P + +IV +
Sbjct 89 GNDPNAFILASSYIK-NDVSAIDINLGCPQ-GIARKGRYGSFLLEYPQLINEIVRSL--- 143
Query 93 VQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPKKNRSVPPL 152
Q + V C++ D + T ++ GCK VH R + K S
Sbjct 144 TQTGINVTCKIRKVEKDCLQSTLNLCYSLEASGCKALTVHGR----HRSETKTRISECDW 199
Query 153 LYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKGEWKAGDTAEAKDPQIPDADVTNGSQ 212
++ + + P + NGG+ T E ++ L E+ D + + + + + +G
Sbjct 200 DSIKIIKSKVNIPVI---ANGGIETFEDVKRCL--EYTGADAVMSSEAILENPYLFSGKI 254
Query 213 YSGL------YGVMIGRAAMNDPCCLAQADKLIY 240
Y+ + ++ G C A K++Y
Sbjct 255 YNNIDIFEEYLSILKGSPRQKISCIKGHAFKILY 288
> cel:C45G9.2 hypothetical protein; K05545 tRNA-dihydrouridine
synthase 4 [EC:1.-.-.-]
Length=284
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query 54 VNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQIP---VTVKCRLGVDNLDS 110
V+LN GCP V KG FG+AL+ P + D+V + + R+ P V++K R+ D
Sbjct 77 VDLNCGCPKHDVRSKG-FGSALLSKPELLADMVRQTRARIPDPDFSVSLKIRINHD---- 131
Query 111 PEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPKKNRSVPPLLYHRVFELQEAFPELHFS 170
E T G H VH R Q +P +++ R+ + + P +
Sbjct 132 IEKTVDLCRKAEAAGVTHLTVHGRTPS-QRAEPIDIQAL------RIVKDSVSVPII--- 181
Query 171 LNGGVTTLELAQQLLKGEWKAGDTAEAKDPQIPDADVTNGSQYS 214
NGG+TT E + L E D A + + + + G +++
Sbjct 182 ANGGITTRE--EALFLAEQTGVDGIMAANGLLDNPALFAGHEHT 223
> mmu:68730 Dus1l, 1110032N12Rik; dihydrouridine synthase 1-like
(S. cerevisiae); K05542 tRNA-dihydrouridine synthase 1 [EC:1.-.-.-]
Length=475
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query 33 GSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRR 92
++P+ +AA A+ D ++LN+GCP + +G +GA L ++ ++ R
Sbjct 82 ANDPEVFVQAALLAQ-DYCDAIDLNLGCPQ-MIAKRGHYGAFLQEEWDLLQRMILLAHER 139
Query 93 VQIPVTVKCRLGVDNLDSPEFTK--QFVETVSQGGCKHFIVHAR 134
+ +PVT K R+ PE K ++ + + + GC+ VH R
Sbjct 140 LSVPVTCKIRV------FPEIDKTVRYAQMLEKAGCQLLTVHGR 177
> ath:AT4G38890 dihydrouridine synthase family protein; K05544
tRNA-dihydrouridine synthase 3 [EC:1.-.-.-]
Length=700
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query 52 DEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQIPVTVKCRL----GVDN 107
D +++N+GCP VV+K S G+AL+ P ++++IV V+ P+T+K R G +
Sbjct 430 DFIDINMGCPIDMVVNK-SAGSALLNKPLRMKNIVEVSSSIVETPITIKVRTAFFEGKNR 488
Query 108 LDSPEFTKQFVETVSQGGCKHFIVHAR 134
+DS + + G +H R
Sbjct 489 IDS------LIADIGNWGATAVTIHGR 509
> dre:445096 dus4l, zgc:92033; dihydrouridine synthase 4-like
(S. cerevisiae); K05545 tRNA-dihydrouridine synthase 4 [EC:1.-.-.-]
Length=285
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query 11 RARLEESTTWKRYR--VCRFFLSGGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDK 68
+AR E TT K R + +F + Q +A+AA D V+LN GCP + +
Sbjct 36 KARDSEFTTNKNDRPLIVQF---AAKDAQTLADAACVVSPFS-DGVDLNCGCPQRWAMSE 91
Query 69 GSFGAALMRSPTKVRDIVYEMKRRVQIP---VTVKCRLGVDNLDSPEFTKQFVETVSQGG 125
G +GA L+ P V+D+V ++ ++ P V++K R+ D T + V G
Sbjct 92 G-YGACLINKPELVKDMVRHVRNQIDNPNYAVSIKIRIHKD----VRQTVDLCQKVEAAG 146
Query 126 CKHFIVHARKA 136
+ VH R A
Sbjct 147 VSYITVHGRTA 157
> tgo:TGME49_002790 dihydrouridine synthase domain-containing
protein (EC:5.1.3.9); K05542 tRNA-dihydrouridine synthase 1
[EC:1.-.-.-]
Length=540
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 67/175 (38%), Gaps = 30/175 (17%)
Query 33 GSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRR 92
G +P + AA E + V++N GCP + +G +GA L+ P + DIV + +
Sbjct 149 GDSPATLLAAAQLVE-DEVEAVDVNFGCPQ-GIARRGHYGAFLLNEPELLVDIVSTLHKH 206
Query 93 VQIPVTVKCR-----------------LGVDNLDSPEFTKQFVETVSQGGCKHFIVHARK 135
++ PVT K R L +D + T + + GC +H R
Sbjct 207 LKTPVTCKMRKVSPRNPRDALPRSEAALVLDEERRLQDTLRLCDAFEAAGCACLCIHGRT 266
Query 136 A-----------WLQGVDPKKNRSVPPLLYHRVFELQEAFPELHFSLNGGVTTLE 179
WL K+ S+P + V ++A L F+ V + E
Sbjct 267 KEEKAAFVGPCDWLAIRHVKQRLSIPVIANGAVETYEDALRCLEFTGADAVMSAE 321
> xla:432319 MGC132093; hypothetical protein MGC78973; K05542
tRNA-dihydrouridine synthase 1 [EC:1.-.-.-]
Length=465
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query 33 GSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRR 92
++P+ +AA A+ D ++LN+GCP + +G +G+ L + ++ ++
Sbjct 76 ANDPEVFVQAALLAQ-DYCDAIDLNLGCPQ-MIAKRGHYGSFLQDEWDLLEKMIQLAHQK 133
Query 93 VQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQG 140
+ +PVT K R+ E T ++ + + + GC+ VH R +G
Sbjct 134 LSVPVTCKIRV----FPEIEKTVEYAKMLEKAGCQLLTVHGRTKEQKG 177
> hsa:64118 DUS1L, DUS1, PP3111; dihydrouridine synthase 1-like
(S. cerevisiae); K05542 tRNA-dihydrouridine synthase 1 [EC:1.-.-.-]
Length=473
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query 33 GSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRR 92
++P+ +AA A+ D ++LN+GCP + +G +GA L ++ ++ +
Sbjct 82 ANDPEVFVQAALLAQ-DYCDAIDLNLGCPQ-MIAKRGHYGAFLQDEWDLLQRMILLAHEK 139
Query 93 VQIPVTVKCRLGVDNLDSPEFTK--QFVETVSQGGCKHFIVHAR 134
+ +PVT K R+ PE K ++ + + + GC+ VH R
Sbjct 140 LSVPVTCKIRV------FPEIDKTVRYAQMLEKAGCQLLTVHGR 177
> xla:379349 dus3l, MGC53781; dihydrouridine synthase 3-like;
K05544 tRNA-dihydrouridine synthase 3 [EC:1.-.-.-]
Length=640
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query 52 DEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQIPVTVKCRLGVDNLDSP 111
D V++NVGCP V KG G LM K IV M + +P+TVK R GV +
Sbjct 378 DFVDINVGCPIDLVYKKGG-GCGLMNRTNKFEQIVKGMNSVLDVPLTVKIRTGVQ--EKV 434
Query 112 EFTKQFVETVSQGGCKHFIVHAR 134
+ + + G +H R
Sbjct 435 NIAHKLIPNLRDWGVSLVTLHGR 457
> dre:393647 MGC63779; zgc:63779; K05544 tRNA-dihydrouridine synthase
3 [EC:1.-.-.-]
Length=660
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query 52 DEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQIPVTVKCRLGVDNLDSP 111
D V++N GCP V KG G LM +K IV M + +P+TVK R GV +
Sbjct 398 DFVDINSGCPIDLVYKKGG-GCGLMTRTSKFEQIVRGMNSVLDVPLTVKIRTGVQQ--NS 454
Query 112 EFTKQFVETVSQGGCKHFIVHAR 134
+ + + + G +H R
Sbjct 455 NIAHKLIPEMKKWGVSLITLHGR 477
> mmu:224907 Dus3l, AI662135, AW557805, MGC56820; dihydrouridine
synthase 3-like (S. cerevisiae); K05544 tRNA-dihydrouridine
synthase 3 [EC:1.-.-.-]
Length=637
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query 52 DEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQIPVTVKCRLGV 105
D V++NVGCP V KG G ALM K + IV + + +P+TVK R GV
Sbjct 375 DFVDINVGCPIDLVYKKGG-GCALMNRSAKFQQIVRGVNEVLDVPLTVKMRTGV 427
> cel:F36A2.2 hypothetical protein; K05542 tRNA-dihydrouridine
synthase 1 [EC:1.-.-.-]
Length=527
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query 52 DEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQIPVTVKCRLGVDNLDSP 111
D V+LN+GCP V +G +G+ L + ++V ++ ++P++ K R+ D +
Sbjct 154 DGVDLNLGCPQM-VAKRGRYGSWLQDEVDLICEMVSAVRDYCRLPISCKIRVRDDRQQTV 212
Query 112 EFTKQFVETVSQGGCKHFIVHARKAWLQGVD 142
E+ K+ V+ G VH R ++G +
Sbjct 213 EYAKRLVD----AGATMLTVHGRTRDMKGAE 239
> dre:322715 dus1l, wu:fb71f06, zgc:63748; dihydrouridine synthase
1-like (S. cerevisiae); K05542 tRNA-dihydrouridine synthase
1 [EC:1.-.-.-]
Length=479
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query 33 GSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRR 92
++P+ +AA A+ D ++LN+GCP + +G +G L + ++ +
Sbjct 82 ANDPEVFIQAALLAQ-DYCDAIDLNLGCPQ-MIAKRGHYGVFLQDEWDLLEKMIKLANEK 139
Query 93 VQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHAR 134
+ +P+T K R+ E T ++ + + + GC+ VH R
Sbjct 140 LSVPITCKIRV----FPEIEKTVKYAKMLEKAGCQLLTVHGR 177
> dre:100330185 dihydrouridine synthase 1-like (S. cerevisiae)-like;
K05542 tRNA-dihydrouridine synthase 1 [EC:1.-.-.-]
Length=496
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query 33 GSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRR 92
++P+ +AA A+ D ++LN+GCP + +G +G L + ++ +
Sbjct 99 ANDPEVFIQAALLAQ-DYCDAIDLNLGCPQ-MIAKRGHYGVFLQDEWDLLEKMIKLANEK 156
Query 93 VQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHAR 134
+ +P+T K R+ E T ++ + + + GC+ VH R
Sbjct 157 LSVPITCKIRV----FPEIEKTVKYAKMLEKAGCQLLTVHGR 194
> hsa:11062 DUS4L, DUS4, MGC133233, PP35; dihydrouridine synthase
4-like (S. cerevisiae); K05545 tRNA-dihydrouridine synthase
4 [EC:1.-.-.-]
Length=317
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query 54 VNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQIP---VTVKCRLGVDNLDS 110
+++N GCP + +G +GA L+ P V+D+V +++ +V+ P V++K R+ D
Sbjct 110 IDINCGCPQRWAMAEG-YGACLINKPELVQDMVKQVRNQVETPGFSVSIKIRIH----DD 164
Query 111 PEFTKQFVETVSQGGCKHFIVHARKA--------WLQGVDPKKNRSVPPLLYHRVFELQE 162
+ T + G VH R A + K+N S+P + + L+E
Sbjct 165 LKRTVDLCQKAEATGVSWITVHGRTAEERHQPVHYDSIKIIKENMSIPVIANGDIRSLKE 224
Query 163 A 163
A
Sbjct 225 A 225
> mmu:71916 Dus4l, 2310069P03Rik, 2700089B10Rik, AI482040, MGC130363,
Pp35; dihydrouridine synthase 4-like (S. cerevisiae);
K05545 tRNA-dihydrouridine synthase 4 [EC:1.-.-.-]
Length=324
Score = 38.1 bits (87), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 46/227 (20%)
Query 10 VRARLEESTTWKRYRVCRFFLSGGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKG 69
++AR E TT C + +N + A + +++N GCP R
Sbjct 68 IKARDSEFTT--NQGDCPLIVQFAANDARLLSDAALLVCPYANGIDINCGCPQ-RWAMAD 124
Query 70 SFGAALMRSPTKVRDIVYEMKRRVQIP---VTVKCRLGVDNLDSPEFTKQFVETVSQGGC 126
+GA L+ P V D+V +++ RV+ P V++K R+ D + + ++ T G
Sbjct 125 GYGACLINKPELVHDMVRQVRNRVESPRFSVSIKIRIHDDLARTIDLCRKAEAT----GV 180
Query 127 KHFIVHARKAWLQGVDPKKNRSVPPLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLK 186
VH R V+ + P+ Y + ++E + NG + +L+ A+ +
Sbjct 181 SWITVHGRT-----VEERHQ----PVHYDAIKMIKENV-SIPIVANGDIRSLKEAENV-- 228
Query 187 GEWKAGDTAEAKDPQIPDADVTNGSQYSGLYGVMIGRAAMNDPCCLA 233
W Q +G GVM+ R + +P A
Sbjct 229 --W----------------------QMTGTDGVMVARGLLTNPAMFA 251
> cel:Y37E11B.5 hypothetical protein; K05544 tRNA-dihydrouridine
synthase 3 [EC:1.-.-.-]
Length=554
Score = 37.4 bits (85), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 99/254 (38%), Gaps = 47/254 (18%)
Query 16 ESTTWKRYRVCRFF---LSGGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFG 72
E + KR+ + F L+GG + E D +++N+GCP VV++ G
Sbjct 248 EYSLLKRHPCEKIFGVQLAGGFADTMAKASQIVVENFDVDFIDINMGCP-IDVVNQKGGG 306
Query 73 AALMRSPTKVRDIVYEMKRRVQ--IPVTVKCRLGVDN--LDSPEFTKQFVETVSQGGCKH 128
AL P K+ +++ K + P+TVK R G+ L +PE+ + ++ S
Sbjct 307 CALPSRPQKLFEVLAATKSVLGGCCPLTVKIRTGMKEGVLKAPEYVEH-MKKHSWHTPDL 365
Query 129 FIVHARKAWLQGVDPKKNRSVPPLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKGE 188
H R K+ R + F +QEA + + G + + E + L+
Sbjct 366 ITFHPRS--------KEQRYTRLANWDFTFPVQEATKPVPLWVCGDILSWEDYYERLE-- 415
Query 189 WKAGDTAEAKDPQIPDADVTNGSQYSGLYGVMIGRAAMNDPCCLAQADKLIYGSRENPES 248
QY + G+MIGR A+ P + D+ R S
Sbjct 416 -----------------------QYP-VNGIMIGRGALIKPWIFTEIDE----RRTWDIS 447
Query 249 AQCRRSLLLAYIDY 262
+ R LL ++DY
Sbjct 448 STERFDLLKKFVDY 461
> xla:734320 dus4l; dihydrouridine synthase 4-like; K05545 tRNA-dihydrouridine
synthase 4 [EC:1.-.-.-]
Length=308
Score = 37.0 bits (84), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 44/183 (24%)
Query 54 VNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRV---QIPVTVKCRLGVDNLDS 110
++LN GCP + +G +GA L+ +P V D+V +++ +V + +++K R+ D +
Sbjct 100 IDLNCGCPQRWAMAEG-YGACLINNPELVSDMVRQVRNQVGSSEFTISIKIRIHADISRT 158
Query 111 PEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPKKNRSVPPLLYHRVFELQEAFPELHFS 170
+ ++ G VH R + P+ Y+ + ++E+ +
Sbjct 159 VDLCRK----AEAAGVSWITVHGR---------THDERHQPVHYNAIKNIKESL-SIPIV 204
Query 171 LNGGVTTLELAQQLLKGEWKAGDTAEAKDPQIPDADVTNGSQYSGLYGVMIGRAAMNDPC 230
NG + +L+ A+ N Q +G GVM R + +P
Sbjct 205 ANGDIKSLKEAE--------------------------NIHQITGADGVMAARGLLANPA 238
Query 231 CLA 233
A
Sbjct 239 MFA 241
> sce:YLR401C DUS3; Dihydrouridine synthase, member of a widespread
family of conserved proteins including Smm1p, Dus1p, and
Dus4p; contains a consensus oleate response element (ORE)
in its promoter region (EC:1.-.-.-); K05544 tRNA-dihydrouridine
synthase 3 [EC:1.-.-.-]
Length=668
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query 53 EVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQ-IPVTVKCRLGV 105
E+NLN GCP + +GS G+AL+ +P ++ + M + IP+TVK R G
Sbjct 379 EINLNSGCPIDLLYRQGS-GSALLDNPARMIRCLNAMNYVSKDIPITVKIRTGT 431
> hsa:1806 DPYD, DHP, DHPDHASE, DPD, MGC132008, MGC70799; dihydropyrimidine
dehydrogenase (EC:1.3.1.2); K00207 dihydropyrimidine
dehydrogenase (NADP+) [EC:1.3.1.2]
Length=1025
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 59/169 (34%), Gaps = 26/169 (15%)
Query 35 NPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQ 94
N + E A +E +G D + LN+ CP + + G A + P VR+I +++ VQ
Sbjct 646 NKNDWTELAKKSEDSGADALELNLSCP--HGMGERGMGLACGQDPELVRNICRWVRQAVQ 703
Query 95 IPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPK---------- 144
IP K V ++ S +GG + L G+
Sbjct 704 IPFFAKLTPNVTDIVS------IARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAVGIA 757
Query 145 --------KNRSVPPLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLL 185
++ P+ V + A P GG+ + E Q L
Sbjct 758 KRTTYGGVSGTAIRPIALRAVTSIARALPGFPILATGGIDSAESGLQFL 806
> mmu:99586 Dpyd, AI315208, DPD, E330028L06Rik, MGC37940; dihydropyrimidine
dehydrogenase (EC:1.3.1.2); K00207 dihydropyrimidine
dehydrogenase (NADP+) [EC:1.3.1.2]
Length=1025
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 26/169 (15%)
Query 35 NPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQ 94
N + E + AE +G D + LN+ CP + + G A + P VR+I +++ V+
Sbjct 646 NKSDWMELSKMAEASGADALELNLSCP--HGMGERGMGLACGQDPELVRNICRWVRQAVR 703
Query 95 IPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPK---------- 144
+P K V ++ S +GG + L G+
Sbjct 704 VPFFAKLTPNVTDIVS------IARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIG 757
Query 145 --------KNRSVPPLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLL 185
++ P+ V + A P GG+ + E Q L
Sbjct 758 RRTTYGGVSGTAIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFL 806
> cel:C25F6.3 dpyd-1; DihydroPYrimidine Dehydrogenase family member
(dpyd-1); K00207 dihydropyrimidine dehydrogenase (NADP+)
[EC:1.3.1.2]
Length=1059
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query 35 NPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQ 94
N + E AT +E AG D + LN+ CP + +KG G A +SP V++I ++ V+
Sbjct 660 NKADWIELATKSEEAGADILELNLSCPH-GMGEKG-MGLACGQSPEIVKEICRWVRACVK 717
Query 95 IP 96
IP
Sbjct 718 IP 719
> mmu:229687 Chi3l7, Bclp, Bclp1, Bclp2, MGC156874; chitinase
3-like 7
Length=431
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query 3 PSISRIRVRARLEESTTWKRYRVCRFFLSGGSNPQNVAEAATWA----ELAGYDEVNLNV 58
P+ S + EES TW Y +C F G + + A+ +A + GYD V
Sbjct 284 PTASAGTLGPYTEESGTWAYYEICSFLNDGATEAWDSAQEVPYAYQGNKWVGYDNVK--- 340
Query 59 GCPSCRV----VDKGSFGAALMRSPTKVRDIVYEMKRRVQIPVTVKCR 102
S R+ + + + G A++ + + D + Q P+T +
Sbjct 341 ---SFRIKAEWLKQNNLGGAMLWT-LDMDDFTGSFCNQGQFPLTSTLK 384
> xla:447312 dpyd, MGC81821, dhp, dhpdhase, dpd; dihydropyrimidine
dehydrogenase (EC:1.3.1.2); K00207 dihydropyrimidine dehydrogenase
(NADP+) [EC:1.3.1.2]
Length=940
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 26/169 (15%)
Query 35 NPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQ 94
N + E + AE +G + + LN+ CP + + G A + P VR+I +++ V+
Sbjct 646 NKDDWTELSLMAEASGANALELNLSCP--HGMGERGMGLACGQDPELVRNICRWVRQAVK 703
Query 95 IPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPK---------- 144
IP K V ++ Q +GG + L G+
Sbjct 704 IPFFAKLTPNVTDVVKIAMAAQ------EGGADGVTATNTVSGLMGLKADATPWPAVGSG 757
Query 145 --------KNRSVPPLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLL 185
++ P+ V + A P GG+ + E Q L
Sbjct 758 SRTTYGGVSGNAIRPIALRAVSAIARALPGFPILATGGIDSAESGLQFL 806
> dre:556707 hypothetical LOC556707
Length=499
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 0/78 (0%)
Query 44 TWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRDIVYEMKRRVQIPVTVKCRL 103
+W L +DE +N C ++D + SPT V D YE V + K +
Sbjct 154 SWLSLRLFDEGTINKWKDCCTMIDHANGATNYFFSPTLVADWFYESISMVLAEIQKKPQR 213
Query 104 GVDNLDSPEFTKQFVETV 121
GV ++ E + +
Sbjct 214 GVPRVEKVERNATVISII 231
Lambda K H
0.320 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 10848096440
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40