bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_3291_orf2
Length=393
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_008540 ATP-dependent RNA helicase, putative (EC:5.9... 365 1e-100
ath:AT1G77030 ATP binding / ATP-dependent helicase/ RNA bindin... 310 9e-84
bbo:BBOV_I003430 19.m02227; DEAD/DEAH box helicase and helicas... 300 7e-81
cpv:cgd3_2330 hypothetical protein ; K14808 ATP-dependent RNA ... 297 5e-80
mmu:71990 Ddx54, 2410015A15Rik, AI414901, DP97; DEAD (Asp-Glu-... 283 8e-76
hsa:79039 DDX54, DP97, MGC2835; DEAD (Asp-Glu-Ala-Asp) box pol... 276 1e-73
tpv:TP03_0195 ATP-dependent RNA helicase; K14808 ATP-dependent... 275 2e-73
dre:286777 ddx54, MGC111908, chunp6913, mgc2835, zgc:111908; D... 275 3e-73
xla:495097 ddx54, MGC132273; DEAD (Asp-Glu-Ala-Asp) box polype... 270 8e-72
sce:YDL031W DBP10; Dbp10p (EC:3.6.1.-); K14808 ATP-dependent R... 265 3e-70
cel:Y94H6A.5 hypothetical protein; K14808 ATP-dependent RNA he... 253 1e-66
dre:386632 ddx49, wu:fb82g04, wu:fd12e05; DEAD (Asp-Glu-Ala-As... 213 8e-55
hsa:54555 DDX49, FLJ10432, R27090_2; DEAD (Asp-Glu-Ala-Asp) bo... 209 1e-53
mmu:234374 Ddx49, R27090_2; DEAD (Asp-Glu-Ala-Asp) box polypep... 208 3e-53
ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-depe... 207 6e-53
ath:AT1G16280 DEAD/DEAH box helicase, putative; K14778 ATP-dep... 204 3e-52
bbo:BBOV_I004200 19.m02020; DEAD/DEAH box helicase and helicas... 204 5e-52
eco:b0797 rhlE, ECK0786, JW0781; ATP-dependent RNA helicase; K... 201 4e-51
pfa:MAL8P1.19 RNA helicase, putative 199 1e-50
sce:YLL008W DRS1; Drs1p (EC:3.6.1.-); K13181 ATP-dependent RNA... 198 2e-50
sce:YHR065C RRP3; Protein involved in rRNA processing; require... 198 3e-50
bbo:BBOV_I004220 19.m02359; DEAD/DEAH box helicase and helicas... 197 5e-50
ath:AT3G06480 DEAD box RNA helicase, putative 197 7e-50
bbo:BBOV_IV001840 21.m02846; DEAD/DEAH box helicase (EC:3.6.1.... 195 2e-49
cel:T26G10.1 hypothetical protein; K14777 ATP-dependent RNA he... 195 3e-49
cpv:cgd4_3180 Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+H... 195 3e-49
ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823 A... 194 5e-49
xla:432250 ddx47, MGC81303; DEAD (Asp-Glu-Ala-Asp) box polypep... 192 2e-48
tgo:TGME49_079330 ATP-dependent RNA helicase, putative ; K1477... 192 2e-48
hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-... 191 4e-48
ath:AT4G16630 DEAD/DEAH box helicase, putative (RH28); K13181 ... 191 4e-48
ath:AT3G01540 DRH1; DRH1 (DEAD BOX RNA HELICASE 1); ATP-depend... 191 4e-48
mmu:67755 Ddx47, 4930588A18Rik, C77285; DEAD (Asp-Glu-Ala-Asp)... 190 8e-48
sce:YGL078C DBP3; Dbp3p (EC:3.6.1.-); K14811 ATP-dependent RNA... 190 9e-48
cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA he... 189 1e-47
ath:AT5G60990 DEAD/DEAH box helicase, putative (RH10); K14777 ... 189 2e-47
hsa:51202 DDX47, DKFZp564O176, E4-DBP, FLJ30012, HQ0256, MSTP1... 189 2e-47
cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA h... 189 2e-47
sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA... 188 3e-47
dre:30263 vasa, MGC158535, fi24g05, vas, vlg, wu:fi24g05, zgc:... 188 3e-47
sce:YPL119C DBP1, LPH8; Dbp1p (EC:3.6.1.-); K11594 ATP-depende... 187 9e-47
ath:AT2G42520 DEAD box RNA helicase, putative; K11594 ATP-depe... 187 9e-47
hsa:54514 DDX4, MGC111074, VASA; DEAD (Asp-Glu-Ala-Asp) box po... 186 1e-46
ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-depe... 186 1e-46
ath:AT5G14610 ATP binding / ATP-dependent helicase/ helicase/ ... 186 1e-46
eco:b2576 srmB, ECK2574, JW2560, rbaB, rhlA; ATP-dependent RNA... 186 1e-46
hsa:1654 DDX3X, DBX, DDX14, DDX3, HLP2; DEAD (Asp-Glu-Ala-Asp)... 186 1e-46
mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C8092... 186 1e-46
xla:397935 an3; ATP dependent RNA helicase (EC:3.6.4.13); K115... 186 2e-46
dre:553715 MGC112350; zgc:112350 (EC:3.6.4.13); K14777 ATP-dep... 186 2e-46
> tgo:TGME49_008540 ATP-dependent RNA helicase, putative (EC:5.99.1.3);
K14808 ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=983
Score = 365 bits (938), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 259/363 (71%), Gaps = 1/363 (0%)
Query 18 LFISTAAAAQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQH 77
L T+ AA + LGF PTP+QR AIPLLL+G+DCI++ RTGSGKTA +LLPLL L +H
Sbjct 31 LSTPTSLAAIKGLGFSQPTPIQRRAIPLLLKGKDCILMSRTGSGKTACFLLPLLDLLGEH 90
Query 78 AAAVGARALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVF 137
++ VG RA+++APTRELV QIH V + LL SS+RVC L+GG +Y++QF AL+RNPD++
Sbjct 91 SSVVGVRAVLIAPTRELVAQIHRVCSKLLHSSSLRVCCLLGGENYSKQFLALSRNPDVLL 150
Query 138 GTPGRLLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASL 197
T GR QL +++L L+A VLDEAD++ E GW QL +L+ AL A +Q V V+A+L
Sbjct 151 TTVGRGSQLIHDKVLSLSAARFLVLDEADRIFELGWKEQLSMLFAALPASKQVVLVSATL 210
Query 198 PSSLLEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQA 257
P L+ F GL++P FV++ K L+ L ++FLF KVP LL+LL+ ++Q
Sbjct 211 PGDLVNFARLGLRDPEFVRLEKECTLSDDLHMQFLFVRAAQKVPTLLFLLKQSIQKKEQV 270
Query 258 LVFVNTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAAR 317
LVF +TRHQA FL+ + L +IYG+M+Q +R LAAF+K + L+VTDVAAR
Sbjct 271 LVFASTRHQATFLQ-CFCERLAFPSAVIYGAMDQTERVQTLAAFKKGKISVLLVTDVAAR 329
Query 318 GIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGR 377
G+DI LP VINFDFP+SA+++VHR GRTARAGR G S+ T +DLP+A ++M+F+GGR
Sbjct 330 GLDIPHLPSVINFDFPSSAKLFVHRVGRTARAGRSGTAFSLVTGDDLPYAVELMSFLGGR 389
Query 378 IVP 380
+VP
Sbjct 390 LVP 392
> ath:AT1G77030 ATP binding / ATP-dependent helicase/ RNA binding
/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding; K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=891
Score = 310 bits (793), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 224/356 (62%), Gaps = 2/356 (0%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA 85
A ++ G++VPTP+QR +PL+L G D + + RTGSGKTAA+L+P+L++L+QH G RA
Sbjct 42 AIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRA 101
Query 86 LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQ 145
L+++PTR+L +Q L + + +RV +LVGG S QFE L + PD++ TPGRL+
Sbjct 102 LILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMH 161
Query 146 LQQE-QLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEF 204
L E + L V V DEAD L G+ QL + L+ +Q + +A+LPS+L EF
Sbjct 162 LLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLLFSATLPSALAEF 221
Query 205 ISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTR 264
GL+ P V++ ++++ L L FL K ALLYL++ + +QQ L+FV+T+
Sbjct 222 AKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKYSALLYLVREHISSDQQTLIFVSTK 281
Query 265 HQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISEL 324
H EF+ +FK I P + YG M+Q R +++ FR R+++ LIVTD+AARGIDI L
Sbjct 282 HHVEFVN-SLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPLL 340
Query 325 PFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRIVP 380
VIN+DFP +++VHR GR ARAGR GC S TPED+P+ D+ F+ + P
Sbjct 341 DNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPEDMPYMLDLHLFLSKPVRP 396
> bbo:BBOV_I003430 19.m02227; DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; K14808 ATP-dependent
RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=783
Score = 300 bits (768), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 227/359 (63%), Gaps = 6/359 (1%)
Query 25 AAQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGAR 84
A + +L ++ P+ +QR IP +LQGRD + + RTGSGKTAAYL P++Q L+ H+ VG R
Sbjct 36 ALEHKLRYKQPSTIQRRTIPAVLQGRDVVCIARTGSGKTAAYLAPVVQLLEGHSRTVGVR 95
Query 85 ALVVAPTRELVQQIHGVAAALL----RCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTP 140
L++ PTREL Q+ V + R ++R L+GG S QF AL NPDLV TP
Sbjct 96 CLILLPTRELALQVSSVLKKFIAFTKRDDALRSATLIGGESVEGQFGALTFNPDLVVATP 155
Query 141 GRLLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSS 200
GRL Q E+ + L V V+DEADKL E G+ P + + L K+Q + V+A+LPS
Sbjct 156 GRLSQHIAEKSIDLTLVTHFVIDEADKLFEMGFMPDVYRILSRLPEKRQTMLVSATLPSE 215
Query 201 LLEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVF 260
L EF++FGL+NP+ QV K Q+N+ L LRF+++ KV L LL+ E + +VF
Sbjct 216 LTEFVNFGLRNPVIAQVDKDMQINEQLELRFIYSRTEDKVATLCRLLRNSNDTE-RTIVF 274
Query 261 VNTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGID 320
V+T+H EF + ++ T I +YGSM+ R+ + F+ ++ L+VTD+AARG+D
Sbjct 275 VSTKHHVEFFRALLAAT-GITVSAVYGSMDMTARSHQMGLFKSLKTRVLVVTDLAARGLD 333
Query 321 ISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRIV 379
+ + VIN+DFP S+++++HR GRTARAGR+G ISI T D +AF+I+ +G ++V
Sbjct 334 LPLVDCVINYDFPHSSKLFIHRVGRTARAGRQGLAISIVTMYDFAYAFEILTAIGRKMV 392
> cpv:cgd3_2330 hypothetical protein ; K14808 ATP-dependent RNA
helicase DDX54/DBP10 [EC:3.6.4.13]
Length=862
Score = 297 bits (760), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 224/357 (62%), Gaps = 8/357 (2%)
Query 30 LGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQ-QHAAAVGARALVV 88
+G+ +PTP+QR P +L GRD + + RTGSGKTA ++LP++++L H+ VG R +++
Sbjct 22 IGYSLPTPIQRKCFPSILAGRDVVAMARTGSGKTAGFVLPMIERLGCSHSQIVGIRGVIL 81
Query 89 APTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQ 148
+PTREL Q + V L +++ VC L GG S +QFE+L+ NPD+V TPGRL
Sbjct 82 SPTRELALQTYRVVRKLACKTNLVVCALTGGSSLDRQFESLSGNPDIVVATPGRLFHHII 141
Query 149 EQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFG 208
E L L AV VLDEAD+L E G Q++ + ++ +Q V V+A++P++L F
Sbjct 142 EAGLSLIAVKIIVLDEADRLFEMGLASQIEKILESIPKNRQCVLVSATMPTALASFSKVM 201
Query 209 LQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTRHQAE 268
L P +Q+ L++TL L FLF + K+ +LLYLL+ ++A++F T+H +
Sbjct 202 LNEPEVIQIDSDYILSETLKLTFLFVREDEKLASLLYLLRNTIPSHERAIIFCATKHHVD 261
Query 269 FLKLVIFKTLKINPLI---IYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELP 325
+ I K L+ N +I IYG+M+Q RT +L FRK +S LIVTD+AARG+DI +
Sbjct 262 Y----IVKILESNNIIVSYIYGNMDQEARTMHLNTFRKNKSRALIVTDIAARGVDIPMIK 317
Query 326 FVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRIVPLA 382
+VINFDFP S +++VHR GRTARAG+ G S+ T DLP+ D+ F+G ++ L
Sbjct 318 YVINFDFPLSPKLFVHRTGRTARAGQHGRAFSLITSRDLPYTIDLCLFLGLKMTTLT 374
> mmu:71990 Ddx54, 2410015A15Rik, AI414901, DP97; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 54 (EC:3.6.4.13); K14808 ATP-dependent
RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=874
Score = 283 bits (724), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 220/357 (61%), Gaps = 2/357 (0%)
Query 31 GFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALVVAP 90
G++VPTP+QR IP++L G+D + + RTGSGKTA +LLP+ ++L+ +A GARAL+++P
Sbjct 114 GYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSP 173
Query 91 TRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQEQ 150
TREL Q L + + ++ +++GG QF AL NPD++ TPGRL+ + E
Sbjct 174 TRELALQTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEM 233
Query 151 LLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFGLQ 210
L+L +V V DEAD+L E G+ QLQ + G L Q V +A+LP L+EF GL
Sbjct 234 NLKLQSVEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLT 293
Query 211 NPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTRHQAEFL 270
P+ +++ S+LN+ L FL + K LLYLLQ + + Q +VFV T+H AE+L
Sbjct 294 EPVLIRLDVDSKLNEQLKTSFLLVREDTKAAVLLYLLQNVVRPQDQTVVFVATKHHAEYL 353
Query 271 KLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELPFVINF 330
++ ++ IY +++Q R NLA F + LIVTD+AARG+DI L VIN+
Sbjct 354 TELLMGQ-GVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAARGLDIPLLDNVINY 412
Query 331 DFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRIVPLAQCMQQ 387
FPA ++++HR GR ARAGR G S+ P+++P+ D+ F+ GR V LA+ ++
Sbjct 413 SFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFL-GRSVTLARPCEE 468
> hsa:79039 DDX54, DP97, MGC2835; DEAD (Asp-Glu-Ala-Asp) box polypeptide
54 (EC:3.6.4.13); K14808 ATP-dependent RNA helicase
DDX54/DBP10 [EC:3.6.4.13]
Length=882
Score = 276 bits (705), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 219/357 (61%), Gaps = 2/357 (0%)
Query 31 GFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALVVAP 90
G++VPTP+QR IP++L G+D + + RTGSGKTA +LLP+ ++L+ H+A GARAL+++P
Sbjct 115 GYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSP 174
Query 91 TRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQEQ 150
TREL Q L + + ++ +++GG QF AL NPD++ TPGRL+ + E
Sbjct 175 TRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEM 234
Query 151 LLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFGLQ 210
L+L +V V DEAD+L E G+ QLQ + L Q V +A+LP L+EF GL
Sbjct 235 SLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLT 294
Query 211 NPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTRHQAEFL 270
P+ +++ ++LN+ L F + K LL+LL + + Q +VFV T+H AE+L
Sbjct 295 EPVLIRLDVDTKLNEQLKTSFFLVREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEYL 354
Query 271 KLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELPFVINF 330
+ T +++ IY +++ R NLA F + LIVTD+AARG+DI L VIN+
Sbjct 355 -TELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINY 413
Query 331 DFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRIVPLAQCMQQ 387
FPA ++++HR GR ARAGR G S+ P+++P+ D+ F+ GR + LA+ +++
Sbjct 414 SFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFL-GRSLTLARPLKE 469
> tpv:TP03_0195 ATP-dependent RNA helicase; K14808 ATP-dependent
RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=839
Score = 275 bits (704), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 218/349 (62%), Gaps = 7/349 (2%)
Query 27 QQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARAL 86
Q++L + P+ +QR IP +L G D + + RTGSGKT AY+ P++Q L H+ VG R L
Sbjct 25 QKRLRYDQPSAIQRKTIPHILAGSDVLCIARTGSGKTVAYIAPIVQLLDFHSPVVGVRCL 84
Query 87 VVAPTRELVQQIHGVAAALLRCSS----IRVCVLVGGVSYAQQFEALARNPDLVFGTPGR 142
++ PTREL Q+ GV + S+ +RV +L+GG S QF +L+ NPD+V TPGR
Sbjct 85 ILLPTRELALQVEGVLKKFVNFSNQDDALRVSLLIGGKSVESQFGSLSFNPDIVIATPGR 144
Query 143 LLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLL 202
L+ +++ L L+ + V+DEADKL E G+ P + ++ L +Q + V+A+LP+ L
Sbjct 145 LVYHLEQKSLTLSLLTHLVIDEADKLFEMGFLPDVYKVFAYLPKIKQVILVSATLPTQLS 204
Query 203 EFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVN 262
EF+SFGL P+ ++ + +N+ L + F+F+ K+ LL LL + + + +VFV
Sbjct 205 EFVSFGLNEPVLAKLDQDQHINEQLQMSFIFSRNEEKISVLLRLLA--KHKDLKTIVFVA 262
Query 263 TRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDIS 322
TRH EF + ++ K L + +YG+M+ +R ++ FR ++ L+VTDVA+RG+DI
Sbjct 263 TRHHVEFFRTLLLK-LGYSISCVYGTMDMDNRVIEMSRFRSNKTRILLVTDVASRGLDIP 321
Query 323 ELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIM 371
+ VINFDFP S ++++HR GRTARAGR+G +SI T +D F I+
Sbjct 322 LVDLVINFDFPYSTKLFIHRVGRTARAGRQGLAVSIVTNKDFSFLLQIL 370
> dre:286777 ddx54, MGC111908, chunp6913, mgc2835, zgc:111908;
DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 (EC:3.6.4.13); K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=862
Score = 275 bits (702), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 222/359 (61%), Gaps = 2/359 (0%)
Query 31 GFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALVVAP 90
G++VPTP+QR IP++L G+D + + RTGSGKTAA+L+PL ++L+ A GARAL++ P
Sbjct 97 GYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLVPLFEKLKAPQAQTGARALILTP 156
Query 91 TRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQEQ 150
TREL Q L + + +R +++GG S QF AL NPD++ GTPGRL+ + QE
Sbjct 157 TRELALQTMKFTKELGKFTGLRTALILGGDSMDDQFAALHENPDIIIGTPGRLMHVIQEM 216
Query 151 LLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFGLQ 210
L+L +V V DEAD+L E G+ QLQ + L +Q + +A+LP ++EF GL
Sbjct 217 NLKLQSVEYVVFDEADRLFEMGFAEQLQEIIRRLPDARQTLLFSATLPKLIVEFARAGLT 276
Query 211 NPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTRHQAEFL 270
P+ +++ ++L++ L L F K LL+LL+ + ++Q +VFV T+H E+L
Sbjct 277 EPVLIRLDVDTKLSEQLKLSFFSLRLDDKPALLLHLLRNVVKPQEQTVVFVATKHHVEYL 336
Query 271 KLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELPFVINF 330
K + ++ IY +++Q R ++ F R+ + L+VTDVAARGIDI L VIN+
Sbjct 337 K-ELLSAEGVDCSCIYSALDQTARKISIGRFVHRKVMLLLVTDVAARGIDIPLLDNVINY 395
Query 331 DFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRIVPLAQCMQQQQ 389
+FP ++++HR GR ARAGR G S+ P+++P+ +D+ F+ GR + LA Q+
Sbjct 396 NFPCKPKLFLHRVGRVARAGRGGTAYSLVCPDEVPYLYDLHLFL-GRPMQLAHPEHTQE 453
> xla:495097 ddx54, MGC132273; DEAD (Asp-Glu-Ala-Asp) box polypeptide
54; K14808 ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=846
Score = 270 bits (689), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 210/345 (60%), Gaps = 1/345 (0%)
Query 31 GFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALVVAP 90
G++VPTP+QR +P++L G+D + + RTGSGKTA +L+P+ ++L+ H+A G R L+++P
Sbjct 94 GYKVPTPIQRKVVPVILDGKDVVAMARTGSGKTACFLIPMFEKLKAHSAQTGVRGLILSP 153
Query 91 TRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQEQ 150
TREL Q L + + ++ +++GG QF AL NPD++ TPGRL+ + E
Sbjct 154 TRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLMHVAIEM 213
Query 151 LLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFGLQ 210
L+L +V V DEAD+L E G+ QLQ + L +Q + +A+LP LLEF GL
Sbjct 214 NLKLRSVEYVVFDEADRLFEMGFAEQLQEIISRLPETRQTLLFSATLPKMLLEFARAGLT 273
Query 211 NPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTRHQAEFL 270
P+ +++ ++L+ L L F K LL+LL+ + ++Q ++FV T+H AE+L
Sbjct 274 EPVLIRLDVDTKLSDQLKLSFFNVRVEDKPAVLLHLLRCVVKPQEQTVIFVATKHHAEYL 333
Query 271 KLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELPFVINF 330
+ + I IY S++Q R NL F + L+VTDVAARGIDI L VIN+
Sbjct 334 R-ELLDMQGIPCSHIYSSLDQTARKINLGLFLHGKVRALLVTDVAARGIDIPMLDNVINY 392
Query 331 DFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVG 375
+FP A++++HR GR ARAGR G S P+++P+ +D+ F+G
Sbjct 393 NFPPKAKLFLHRVGRVARAGRSGTAYSFIAPDEIPYVYDLHLFLG 437
> sce:YDL031W DBP10; Dbp10p (EC:3.6.1.-); K14808 ATP-dependent
RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=995
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 223/407 (54%), Gaps = 58/407 (14%)
Query 28 QQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALV 87
++ GFR PTP+QR IPL+LQ RD + + RTGSGKTAA++LP++++L+ H+ +GARA++
Sbjct 153 KRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVI 212
Query 88 VAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQ 147
++P+REL Q V R + +R +L GG S +QF + NPD++ TPGR L L+
Sbjct 213 LSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLK 272
Query 148 QEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISF 207
E L L +V V DEAD+L E G+ QL L +L +Q + +A+LP+SL++F+
Sbjct 273 VEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELLASLPTTRQTLLFSATLPNSLVDFVKA 332
Query 208 GLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYL--------------LQALQAG 253
GL NP+ V++ +++++ L + FL + + LLY+ LQ LQ
Sbjct 333 GLVNPVLVRLDAETKVSENLEMLFLSSKNADREANLLYILQEIIKIPLATSEQLQKLQNS 392
Query 254 EQQA---------------------------------------LVFVNTRHQAEFLKLVI 274
+A ++FV TRH E++ ++
Sbjct 393 NNEADSDSDDENDRQKKRRNFKKEKFRKQKMPAANELPSEKATILFVPTRHHVEYISQLL 452
Query 275 FKTLKINPLI--IYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELPFVINFDF 332
LI IYG+++Q R L FR + L+VTDVAARG+DI L VIN+
Sbjct 453 ---RDCGYLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAARGVDIPMLANVINYTL 509
Query 333 PASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRIV 379
P S++++VHR GRTARAG +G SI +LP+ D+ F+G +I+
Sbjct 510 PGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGKKIL 556
> cel:Y94H6A.5 hypothetical protein; K14808 ATP-dependent RNA
helicase DDX54/DBP10 [EC:3.6.4.13]
Length=871
Score = 253 bits (646), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 206/353 (58%), Gaps = 2/353 (0%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA 85
A ++ GF PTP+QR IP ++ G+D + + RTGSGKTAA+++P+LQ+L++ G RA
Sbjct 38 AIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDT-TGIRA 96
Query 86 LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQ 145
L+V+PTREL Q V L R + +R LVGG +QF + NPD++ TPGRLL
Sbjct 97 LMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLH 156
Query 146 LQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFI 205
+ E L+L+ V V DEAD+L E G+ QL + +Q + +A+LP L++F
Sbjct 157 VIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFA 216
Query 206 SFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTRH 265
GL +P+ V++ +++ L + F K+ ALL+L + + +Q +VF T
Sbjct 217 KAGLTDPMLVRLDVDEKVSDKLSMVFCMCRPDEKLFALLHLCRRMDRENKQTVVFCATMK 276
Query 266 QAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELP 325
E++ + I I+ +Y ++ R N+ F ++++ L+VTDVAARG+DI L
Sbjct 277 HVEYV-VGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAARGVDIPLLD 335
Query 326 FVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRI 378
VIN FP A+++VHR GR ARAGR G IS+ ++LP+ D+ F+G I
Sbjct 336 TVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDLFMFLGKPI 388
> dre:386632 ddx49, wu:fb82g04, wu:fd12e05; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 49 (EC:3.6.4.13); K14778 ATP-dependent
RNA helicase DDX49/DBP8 [EC:3.6.4.13]
Length=468
Score = 213 bits (543), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 191/343 (55%), Gaps = 9/343 (2%)
Query 28 QQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALV 87
+Q+G PT VQ IP +L GRDC+ +TGSGKTAA++LP+LQ+L + G LV
Sbjct 18 KQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQKLSEDP--YGVFCLV 75
Query 88 VAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL-QL 146
+ PTREL QI L + ++ C++VGG+ Q L++ P +V TPGRL +
Sbjct 76 LTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLELSKKPHVVVATPGRLADHI 135
Query 147 QQEQLLQLAAVAAAVLDEADKLLEAG---WGPQLQLLWGALAAKQQGVFVAASLPSSLLE 203
+ + L + ++DEAD+LLE G + L+++ A+ AK+Q + +A+L +L +
Sbjct 136 RSSDTINLNRIQFLIMDEADRLLEQGCTDFTKDLEVILSAVPAKRQTLLFSATLTDTLQQ 195
Query 204 FISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQA--GEQQALVFV 261
S + P F + Q + L RF+ + +K L++L+Q Q + ++F
Sbjct 196 LQSIAMNRPFFWEHKSDVQTVEELDQRFILTPEKVKDAYLVHLIQTFQDEHDDWSIIIFT 255
Query 262 NTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDI 321
NT + L +++ + + ++ M+QR R ANLA F+ LI TDVAARG+DI
Sbjct 256 NTCKSCQILTMML-REFNFPTISLHSMMKQRQRFANLAKFKSNVFKILIATDVAARGLDI 314
Query 322 SELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDL 364
+ VIN + P ++Y+HR GRTARAGR G I++ T D+
Sbjct 315 PTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDI 357
> hsa:54555 DDX49, FLJ10432, R27090_2; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 49 (EC:3.6.4.13); K14778 ATP-dependent RNA helicase
DDX49/DBP8 [EC:3.6.4.13]
Length=483
Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 191/343 (55%), Gaps = 9/343 (2%)
Query 28 QQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALV 87
+QLG + PTPVQ IP +L+GRDC+ +TGSGKTAA++LP+LQ+L + G LV
Sbjct 18 RQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDP--YGIFCLV 75
Query 88 VAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL-QL 146
+ PTREL QI L + ++ C++VGG+ Q L+R P +V TPGRL L
Sbjct 76 LTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHL 135
Query 147 QQEQLLQLAAVAAAVLDEADKLLEAG---WGPQLQLLWGALAAKQQGVFVAASLPSSLLE 203
+ + + V+DEAD+LLE G + L+ + A+ A++Q + +A+L +L E
Sbjct 136 RSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRE 195
Query 204 FISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQ--ALVFV 261
P F + P + L R+L + +K L++L+Q Q + ++F
Sbjct 196 LQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFT 255
Query 262 NTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDI 321
NT + L +++ K + ++ M+Q++R A LA F+ LI TDVA+RG+DI
Sbjct 256 NTCKTCQILCMMLRK-FSFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDI 314
Query 322 SELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDL 364
+ VIN + P ++Y+HR GRTARAGR+G I++ T D+
Sbjct 315 PTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
> mmu:234374 Ddx49, R27090_2; DEAD (Asp-Glu-Ala-Asp) box polypeptide
49 (EC:3.6.4.13); K14778 ATP-dependent RNA helicase DDX49/DBP8
[EC:3.6.4.13]
Length=480
Score = 208 bits (530), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 191/343 (55%), Gaps = 9/343 (2%)
Query 28 QQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALV 87
+QLG + PTPVQ IP +L+GRDC+ +TGSGKTAA++LP+LQ+L + G LV
Sbjct 18 RQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDP--YGIFCLV 75
Query 88 VAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL-QL 146
+ PTREL QI L + ++ C++VGG+ Q L+R P +V TPGRL L
Sbjct 76 LTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHL 135
Query 147 QQEQLLQLAAVAAAVLDEADKLLEAG---WGPQLQLLWGALAAKQQGVFVAASLPSSLLE 203
+ + + V+DEAD+LLE G + L+ + A+ A++Q + +A+L +L E
Sbjct 136 RSSNTFNMKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQTLLFSATLTDTLKE 195
Query 204 FISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQA--LVFV 261
P F + + + L R+L + +K L++L+Q Q + ++F
Sbjct 196 LQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIIIFT 255
Query 262 NTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDI 321
NT + L +++ K + ++ M+Q++R A LA F+ LI TDVA+RG+DI
Sbjct 256 NTCKTCQILCMMLRK-FNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDI 314
Query 322 SELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDL 364
+ VIN + P ++Y+HR GRTARAGR+G I++ T D+
Sbjct 315 PTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI 357
> ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=828
Score = 207 bits (527), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 190/350 (54%), Gaps = 8/350 (2%)
Query 28 QQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQH---AAAVGAR 84
++L + P P+Q A+P+++ GRDCI V +TGSGKT ++LP+L+ ++ A G
Sbjct 207 KKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPI 266
Query 85 ALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL 144
LV+APTRELVQQIH + IR + GG AQQ L R ++V TPGR++
Sbjct 267 GLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMI 326
Query 145 QL---QQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSL 201
+ ++ L V V+DEAD++ + G+ PQ+ + + ++Q V +A+ P +
Sbjct 327 DILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQV 386
Query 202 LEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFV 261
L P+ +QV S +N+ + ++ + LL LL + + LVFV
Sbjct 387 ETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWSE-KGKILVFV 445
Query 262 NTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDI 321
++ + + L + K+ L ++G +Q DR + ++ F+ LI T VAARG+D+
Sbjct 446 QSQEKCDALYRDMIKS-SYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDV 504
Query 322 SELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIM 371
EL V+NFD P YVHR GRT RAGR+GC ++ + +D +A D++
Sbjct 505 KELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLV 554
> ath:AT1G16280 DEAD/DEAH box helicase, putative; K14778 ATP-dependent
RNA helicase DDX49/DBP8 [EC:3.6.4.13]
Length=491
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 198/362 (54%), Gaps = 7/362 (1%)
Query 23 AAAAQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVG 82
A ++LG R PTPVQ +P +L GRD + + +TGSGKTAA+ LP+L +L + G
Sbjct 69 AVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDP--YG 126
Query 83 ARALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGR 142
ALVV PTREL Q+ AL C ++R V+VGG+ Q +L P +V TPGR
Sbjct 127 VFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGR 186
Query 143 ---LLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPS 199
LL+ + + VLDEAD++L+ G+ +L+ ++ L +Q + +A++ S
Sbjct 187 IKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTS 246
Query 200 SLLEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQ-AGEQQAL 258
+L + F + ++ + TL +F+F + K L+++L ++ G + A+
Sbjct 247 NLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAM 306
Query 259 VFVNTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARG 318
+FV+T + L L++ L++ + ++ Q R + L+ F+ + L+ TDVA+RG
Sbjct 307 IFVSTCRTCQRLSLML-DELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRG 365
Query 319 IDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRI 378
+DI + VIN+D P R YVHR GRTARAGR G +SI T D+ I VG ++
Sbjct 366 LDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKM 425
Query 379 VP 380
P
Sbjct 426 EP 427
> bbo:BBOV_I004200 19.m02020; DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein (EC:3.6.1.-);
K14777 ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=433
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 187/344 (54%), Gaps = 11/344 (3%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA 85
A Q +G++ PTP+Q AAIP L GRD I + TGSGKT A+ +P+L L + +
Sbjct 57 ACQSMGWQAPTPIQMAAIPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLEDVQRI--YC 114
Query 86 LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL- 144
+V+AP+REL +QI AL +++VCV++GGV Q ALA+ P ++ +PGRL
Sbjct 115 VVLAPSRELCEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPHVIVASPGRLAD 174
Query 145 QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEF 204
++ + L+ V V+DEAD+LL + +L + A+ ++Q +A++ L +
Sbjct 175 HVENTKGFSLSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQTFLFSATMTKKLSKL 234
Query 205 ISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNT- 263
L++P+ VQV + L RFL Q K L LL + A+VF T
Sbjct 235 QKMALKDPISVQVDDKYSTAENLDQRFLLVPQKYKYTYLAALLWYY--ATRTAIVFCKTC 292
Query 264 ---RHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGID 320
+ A +LK + F T I + ++G M Q DR+ L F+ L+ T+V RG+D
Sbjct 293 DGAQRCAAYLKGLKFTT--ICKVCLHGKMTQADRSRALQIFKTGSVNILVATEVGGRGLD 350
Query 321 ISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDL 364
+ + VINFD P ++ Y+HR GRTARAGR G +++ T D+
Sbjct 351 LPMVELVINFDIPECSKDYIHRVGRTARAGRSGLALTVVTQYDV 394
> eco:b0797 rhlE, ECK0786, JW0781; ATP-dependent RNA helicase;
K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Length=454
Score = 201 bits (511), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 191/363 (52%), Gaps = 9/363 (2%)
Query 24 AAAQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQL---QQHAAA 80
A A+Q G+R PTP+Q+ AIP +L+GRD + +TG+GKTA + LPLLQ L Q HA
Sbjct 15 AVAEQ--GYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKG 72
Query 81 V-GARALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGT 139
RAL++ PTREL QI + +IR V+ GGVS Q L D++ T
Sbjct 73 RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVAT 132
Query 140 PGRLLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPS 199
PGRLL L+ + ++L V VLDEAD++L+ G+ ++ + L AK+Q + +A+
Sbjct 133 PGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSD 192
Query 200 SLLEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALV 259
+ L NPL ++V + + + + F + K L +++ + QQ LV
Sbjct 193 DIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIG--KGNWQQVLV 250
Query 260 FVNTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGI 319
F T+H A L + K I I+G+ Q RT LA F+ L+ TD+AARG+
Sbjct 251 FTRTKHGANHLAEQLNKD-GIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGL 309
Query 320 DISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRIV 379
DI ELP V+N++ P YVHR GRT RA G +S+ ++ DI + I
Sbjct 310 DIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIP 369
Query 380 PLA 382
+A
Sbjct 370 RIA 372
> pfa:MAL8P1.19 RNA helicase, putative
Length=1289
Score = 199 bits (507), Expect = 1e-50, Method: Composition-based stats.
Identities = 115/345 (33%), Positives = 196/345 (56%), Gaps = 5/345 (1%)
Query 30 LGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALVVA 89
L + PT +Q+ I +L RD I + +TGSGK+ YL L+ L++H G R L++
Sbjct 178 LKYNKPTNIQKLCITKILHRRDVICISKTGSGKSLVYLCTLIDILKEHNKYYGIRGLIIL 237
Query 90 PTRELVQQIHGVAAALLRCS-SIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQ 148
PT+ELV QI+ + + + + + +++GGVS +QF+ L +N D++ TPGRL L Q
Sbjct 238 PTKELVIQIYKLCKKICKNYFHLNINIIIGGVSIIKQFDILNQNLDILLCTPGRLSFLLQ 297
Query 149 EQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALA-AKQQGVFVAASLPSSLLEFISF 207
E L L V ++DEAD+LLE + + +++ +L +Q + V+A+LP+++ +
Sbjct 298 ETKLSLEKVEILIIDEADRLLELNYYNDMNVIYKSLNNTSKQTILVSATLPTNVENYFKL 357
Query 208 GLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGE-QQALVFVNTRHQ 266
L NP + + + +N+ + L FLF K LL L+ + + + ++F T++
Sbjct 358 KLNNPDVLFLTSDNTINEKVHLHFLFCRSYEKYALLLRLILIFKKKKLGKTMIFFCTKYH 417
Query 267 AEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSL-FLIVTDVAARGIDISELP 325
F I K KI+ I+YG+ + R + F K + FL+VTDVA+RGI+I+ +
Sbjct 418 ILFFS-NILKHFKIHHSILYGNSDTSFRFEQINNFTKNEHIQFLLVTDVASRGINITSVQ 476
Query 326 FVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDI 370
VIN++ P S ++++HR GR R G IS+ T +D+ +A++I
Sbjct 477 NVINYNLPFSPKLFIHRIGRACRTDISGYGISLLTYQDILYAYEI 521
> sce:YLL008W DRS1; Drs1p (EC:3.6.1.-); K13181 ATP-dependent RNA
helicase DDX27 [EC:3.6.4.13]
Length=752
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 194/335 (57%), Gaps = 9/335 (2%)
Query 30 LGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGA-RALVV 88
LG+ P+P+Q A IP+ L G+D I TGSGKTAA+++P++++L A + + R +V+
Sbjct 249 LGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVL 308
Query 89 APTRELVQQIHGVAAALLR-CSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL-QL 146
PTREL Q+ V + R S I + VGG++ QQ + L PD+V TPGR + +
Sbjct 309 LPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHI 368
Query 147 QQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFIS 206
+ + +V V+DEAD++LE G+ +L + G L + +Q + +A++ S + +S
Sbjct 369 RNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVS 428
Query 207 FGLQNPLFVQVHKPSQLNQTLFLRF--LFASQTLKVPALLY-LLQALQ-AGEQQALVFVN 262
L+ P+ + + P + L F + LK PALL+ L++ L G+++ +VFV
Sbjct 429 LSLKKPVRIMIDPPKKAATKLTQEFVRIRKRDHLK-PALLFNLIRKLDPTGQKRIVVFVA 487
Query 263 TRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDIS 322
+ A L+ +I L ++ ++GS+ Q R ++ F+ LI TD+A+RG+DI
Sbjct 488 RKETAHRLR-IIMGLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIP 546
Query 323 ELPFVINFDFPASARVYVHRAGRTARAGREGCVIS 357
++ VIN+D P S +Y+HR GRTARAGREG ++
Sbjct 547 KIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVT 581
> sce:YHR065C RRP3; Protein involved in rRNA processing; required
for maturation of the 35S primary transcript of pre-rRNA
and for cleavage leading to mature 18S rRNA; homologous to
eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase
activity (EC:3.6.1.-); K14777 ATP-dependent RNA helicase
DDX47/RRP3 [EC:3.6.4.13]
Length=501
Score = 198 bits (504), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 7/355 (1%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA 85
A + L + PTP+Q AIP L+G D I + +TGSGKTAA+ +P+L +L A
Sbjct 95 ACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPY--YA 152
Query 86 LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL- 144
++APTREL QQI +L +R +VGG++ Q L R P ++ TPGRL+
Sbjct 153 CILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMD 212
Query 145 QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFV-AASLPSSLLE 203
L+ + L + V+DEAD+LL+ +GP L + + +++ ++ +A++ S + +
Sbjct 213 HLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDK 272
Query 204 FISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNT 263
L NP+ V Q TL + LK L+YLL + ++F T
Sbjct 273 LQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIG--KTMIIFTRT 330
Query 264 RHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISE 323
+ AE L + L+ + ++G + Q R +L F+ + L+ TDVAARG+DI
Sbjct 331 KANAERLS-GLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPS 389
Query 324 LPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRI 378
+ V+N+D P ++ Y+HR GRTARAGR G IS+ + DL I +G ++
Sbjct 390 VDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKKL 444
> bbo:BBOV_I004220 19.m02359; DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein (EC:3.6.1.-)
Length=454
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 182/337 (54%), Gaps = 11/337 (3%)
Query 33 RVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALVVAPTR 92
R PTP+Q AAIP L GRD I + TGSGKT A+ +P+L L + + +V+AP+R
Sbjct 53 RHPTPIQMAAIPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLEDVQRI--YCVVLAPSR 110
Query 93 ELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL-QLQQEQL 151
EL +QI AL +++VCV++GGV Q ALA+ P ++ +PGRL ++ +
Sbjct 111 ELCEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPHVIVASPGRLADHVENTKG 170
Query 152 LQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFGLQN 211
L+ V V+DEAD+LL + +L + A+ ++Q +A++ L + L++
Sbjct 171 FSLSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTERQTFLFSATMTKKLSKLQKMALKD 230
Query 212 PLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNT----RHQA 267
P+ VQV + L RFL Q K L LL + A+VF T + A
Sbjct 231 PISVQVDDKYSTAENLDQRFLLVPQKYKYTYLAALLWYY--ATRTAIVFCKTCDGAQRCA 288
Query 268 EFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELPFV 327
+LK + F T I + ++G M Q DR+ L F+ L+ T+V RG+D+ + V
Sbjct 289 AYLKGLKFTT--ICKVCLHGKMTQADRSRALQIFKTGSVNILVATEVGGRGLDLPMVELV 346
Query 328 INFDFPASARVYVHRAGRTARAGREGCVISITTPEDL 364
INFD P ++ Y+HR GRTARAGR G +++ T D+
Sbjct 347 INFDIPECSKDYIHRVGRTARAGRSGLALTVVTQYDV 383
> ath:AT3G06480 DEAD box RNA helicase, putative
Length=1088
Score = 197 bits (500), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 186/350 (53%), Gaps = 7/350 (2%)
Query 31 GFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLP--LLQQLQQHAAAVGARALVV 88
GF PTP+Q P+ LQ RD + + +TGSGKT YL+P +L + ++ + G L++
Sbjct 454 GFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTVLIL 513
Query 89 APTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQ 148
APTREL QI A R S I L GG Q + L R D+V TPGRL + +
Sbjct 514 APTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILE 573
Query 149 EQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFG 208
+++ V+ VLDEAD++L+ G+ PQ++ + + ++Q + A+ P + + S
Sbjct 574 MKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDL 633
Query 209 LQNPLFVQVHKPSQL--NQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTRHQ 266
L NP+ V + + +L N+ + Q K L +L++ + G + ++F +T+
Sbjct 634 LVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGS-KVIIFCSTKRL 692
Query 267 AEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELPF 326
+ L + + ++I+G Q +R L FR +S LI TDVAARG+DI ++
Sbjct 693 CDHLARSVGRHFGA--VVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRV 750
Query 327 VINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGG 376
VIN+DFP YVHR GRT RAG G + T +D +A D++ + G
Sbjct 751 VINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEG 800
> bbo:BBOV_IV001840 21.m02846; DEAD/DEAH box helicase (EC:3.6.1.-);
K11594 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=609
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 192/364 (52%), Gaps = 23/364 (6%)
Query 29 QLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQ-------------QLQ 75
++ + PTP+Q+ +IP+++ GRD + +TGSGKTAA+LLP+ Q
Sbjct 166 RVNYTKPTPIQKHSIPVIMAGRDLMACAQTGSGKTAAFLLPICTAMLKTGPPASRPMQSS 225
Query 76 QHAAAVGARALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDL 135
H+ LV++PTREL Q A + + IR VL GG +Q L R D+
Sbjct 226 YHSRQALPVCLVLSPTRELAMQTFTEARKFIYNTGIRAVVLYGGGEVRRQLYELERGCDI 285
Query 136 VFGTPGRLLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQG---VF 192
TPGRL + + + L V+ VLDEAD++L+ G+ PQ++ + + Q+G V
Sbjct 286 CVATPGRLTDILERNRIGLHCVSYLVLDEADRMLDMGFAPQIRQVVEHSSMPQEGRQTVM 345
Query 193 VAASLPSSLLEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQA 252
+A+ P + + L++ L++ V + N+ + R L+A Q K+ L+ LL+
Sbjct 346 FSATFPKEIQQLARDFLRDYLYLAVGRVGSTNEFIRQRLLYADQEQKLHYLVKLLRENTN 405
Query 253 GEQQALVFVNTRHQAEFLKLVIFKT--LKINPLIIYGSMEQRDRTANLAAFRKRRSLFLI 310
G L+FV T+ +A+ ++ + K + +N I+G Q+DR L F+ L+
Sbjct 406 G--LVLIFVETKRRADMIESYLLKENFMAVN---IHGDRSQQDREEALRLFKTGERPILV 460
Query 311 VTDVAARGIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDI 370
TDVAARG+DI+ + VIN D PA+ YVHR GRT RAG G S+ + +D D+
Sbjct 461 ATDVAARGLDINNITHVINCDLPANIDDYVHRIGRTGRAGNVGVATSLVSEKDRSILKDL 520
Query 371 MAFV 374
+A +
Sbjct 521 LALL 524
> cel:T26G10.1 hypothetical protein; K14777 ATP-dependent RNA
helicase DDX47/RRP3 [EC:3.6.4.13]
Length=489
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 198/365 (54%), Gaps = 9/365 (2%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA 85
A Q+LG+ P+ +Q+AA+P LQG+D I + TGSGKT A+ +P+LQ L H A
Sbjct 58 ACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFC-- 115
Query 86 LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL- 144
LV+ PTREL QI AL + V+VGGV A Q ALAR P ++ TPGRL+
Sbjct 116 LVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVD 175
Query 145 QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEF 204
L+ + L A+ ++DEAD++L + +L + + +++ +A++ + +
Sbjct 176 HLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKL 235
Query 205 ISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTR 264
L++P V V + L ++F K L+YLL AG A+VF T
Sbjct 236 ERASLRDPARVSVSSRYKTVDNLKQHYIFVPNKYKETYLVYLLNE-HAG-NSAIVFCAT- 292
Query 265 HQAEFLKL-VIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISE 323
A +++ V+ + L + + ++G M Q R +L F+ + L+ TDVAARG+DI
Sbjct 293 -CATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPH 351
Query 324 LPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRIVPLAQ 383
+ VIN+D P+ ++ YVHR GRTARAGR G I++ T D+ I A +G ++ +
Sbjct 352 VDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIEANLGKKLDEY-K 410
Query 384 CMQQQ 388
C++ +
Sbjct 411 CVENE 415
> cpv:cgd4_3180 Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
; K14777 ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=446
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 193/365 (52%), Gaps = 7/365 (1%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA 85
A + LG++ PT +Q+ IP+ L+GRD I + TGSGKT ++++P+LQ+L V A
Sbjct 47 ACESLGWKTPTEIQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQRLLDDQ--VPMYA 104
Query 86 LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL- 144
+++APTREL QI +A S+++ LVGG+ Q +LA+ P ++ +PGRL+
Sbjct 105 VILAPTRELCVQISEQFSAFGSLISLKIATLVGGLDMVMQSLSLAKKPHIIVASPGRLVD 164
Query 145 QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEF 204
L+ + + + V+DEAD+LL + L + + + +A++ + + +
Sbjct 165 HLENTKGFNIGGIKFLVMDEADRLLSMDFEIALNKIVESSPRNRTTYLFSATMTTKVAKL 224
Query 205 ISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTR 264
L NP+ + V+ L ++F K + +LQ L G+ ++F NT
Sbjct 225 QKISLSNPIKICVNTKYDTAANLMQYYMFIPFKYKWSYFIGMLQNL--GQYTGIIFCNTC 282
Query 265 HQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISEL 324
L+ K L N + ++G M Q R + L F+ ++ L T+V +RG+DI +
Sbjct 283 INCRRGDLLA-KELGFNSISLHGRMSQSQRLSALNLFKGKQKRLLFTTEVGSRGLDIPHV 341
Query 325 PFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRIVPLAQC 384
FVINFD P S++ YVHR GRTARAGR G IS+ T D+ F + F R +
Sbjct 342 DFVINFDIPTSSKDYVHRVGRTARAGRSGRAISMVTQYDVE-TFQRIEFALNRKLDEYTS 400
Query 385 MQQQQ 389
+Q+++
Sbjct 401 LQREE 405
> ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=501
Score = 194 bits (493), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 193/369 (52%), Gaps = 17/369 (4%)
Query 28 QQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQH---AAAVGAR 84
++ GF PTP+Q P+ ++GRD I + TGSGKT +YLLP + + A G
Sbjct 115 KKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPI 174
Query 85 ALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL 144
LV+APTREL QI A+ S I+ + GGV Q L + ++V TPGRL+
Sbjct 175 VLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLI 234
Query 145 QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEF 204
+ + L V VLDEAD++L+ G+ PQ++ + + +Q ++ +A+ P + +
Sbjct 235 DMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQL 294
Query 205 ISFGLQNPLFVQVHKPSQLNQTLFLRFLFA--SQTLKVPALLYLLQALQAGEQQALVFVN 262
L NP V + S L +R + S++ K L+ LL+ + G + LVF++
Sbjct 295 SKKFLYNPYKVIIGS-SDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDG-SRILVFLD 352
Query 263 TRHQAEFLKLVIFKTLKIN---PLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGI 319
T+ + I + L+++ L I+G Q +R L+ FR +S + TDVAARG+
Sbjct 353 TKKGCD----QITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGL 408
Query 320 DISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFA---FDIMAFVGG 376
D+ ++ +VIN+DFP S YVHR GRT RAG +G + T + FA +I+ G
Sbjct 409 DVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQ 468
Query 377 RIVPLAQCM 385
++ P M
Sbjct 469 KVSPELASM 477
> xla:432250 ddx47, MGC81303; DEAD (Asp-Glu-Ala-Asp) box polypeptide
47; K14777 ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=448
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 190/354 (53%), Gaps = 6/354 (1%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA 85
A +QLG++ PT +Q AIP+ LQGRD I + TGSGKT A+ LP+LQ L + + A
Sbjct 33 ACEQLGWKQPTKIQIEAIPMALQGRDIIGLAETGSGKTGAFALPILQTLLESPQRL--YA 90
Query 86 LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL- 144
LV+ PTREL QI AL ++ V+VGG+ Q ALA+ P +V TPGRL+
Sbjct 91 LVLTPTRELAFQISEQFEALGSSIGVKSAVIVGGIDMMSQSLALAKKPHIVIATPGRLID 150
Query 145 QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEF 204
L+ + L A+ V+DEAD++L + ++ + + ++ +A++ + +
Sbjct 151 HLENTKGFNLRAIKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVHKL 210
Query 205 ISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTR 264
L++P+ V Q + L ++F K L+Y+L L AG ++F +T
Sbjct 211 QRAALKDPVKCAVSSKYQTVEKLQQFYVFIPSKFKDSYLVYILNEL-AG-NSFMIFCSTC 268
Query 265 HQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISEL 324
+ + + L++ + L + ++G M Q R L F+ + L+ TDVA+RG+DI +
Sbjct 269 NNTQRVALLL-RNLGFTAIPLHGQMGQNKRLGALNKFKAKSRSILLATDVASRGLDIPHV 327
Query 325 PFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRI 378
VINFD P ++ Y+HR GRTARAGR G I+ + D+ I +G ++
Sbjct 328 DVVINFDIPTHSKDYIHRVGRTARAGRSGKAITFVSQYDVELFQRIEHLIGKKL 381
> tgo:TGME49_079330 ATP-dependent RNA helicase, putative ; K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=479
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/353 (36%), Positives = 190/353 (53%), Gaps = 16/353 (4%)
Query 19 FISTAAAAQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHA 78
S A+ LG++ PT +Q +P LQGRD I + TGSGKTAA+ LP+LQ+L Q
Sbjct 58 LCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQRLLQRT 117
Query 79 AAVGARALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFG 138
AL++APTREL QI A+ + V LVGG+ + Q ALA+ P +V G
Sbjct 118 QRF--YALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKPHVVVG 175
Query 139 TPGRLL-QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALA--AKQQGVFVAA 195
+PGR++ LQQ + L +V VLDEAD+LL + LQ+L + A++Q + +A
Sbjct 176 SPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAERQTMLFSA 235
Query 196 SLPSSLLEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQ 255
++ + + + L+ P+ ++V+ + L FL LK L L L
Sbjct 236 TMTTKVSKLQKASLKKPVKLEVNSKYDVASHLQQHFLLVPFKLKHTHLAAAL--LHLSPS 293
Query 256 QALVFVNT----RHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIV 311
+VF NT R A FL+ + F+++ ++G M Q R L FR + L+
Sbjct 294 SVIVFTNTCANARKTALFLRHLGFQSV-----CLHGKMTQPQRIGALTKFRAAETSCLVA 348
Query 312 TDVAARGIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDL 364
T+V +RG+DI + VINFD P S++ Y+HR GRTARAGR G ++I T D+
Sbjct 349 TEVGSRGLDIPHVQMVINFDVPLSSKEYIHRVGRTARAGRTGRALTIVTQYDV 401
> hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 43 (EC:3.6.4.13)
Length=648
Score = 191 bits (486), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 196/383 (51%), Gaps = 25/383 (6%)
Query 28 QQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA-- 85
++ GF+ PTP+Q A P++LQG D I V +TG+GKT YL+P L + G R
Sbjct 258 KKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRP 317
Query 86 --LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRL 143
LV+ PTREL Q+ G VCV GG + +Q E L + D++ TPGRL
Sbjct 318 GMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGG-NRDEQIEELKKGVDIIIATPGRL 376
Query 144 LQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLE 203
LQ + L + VLDEADK+L+ G+ PQ+ + + +Q V +A+ P S+
Sbjct 377 NDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHR 436
Query 204 FISFGLQNPLFVQVHK-----PSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQAL 258
L+ P+ V V S + Q + + ++ K + LQ++ + ++ +
Sbjct 437 LAQSYLKEPMIVYVGTLDLVAVSSVKQNI----IVTTEEEKWSHMQTFLQSMSSTDK-VI 491
Query 259 VFVNTRHQAEFLKL-VIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAAR 317
VFV+ + A+ L +I + + L +G EQRDR L F+ + LI TD+A+R
Sbjct 492 VFVSRKAVADHLSSDLILGNISVESL--HGDREQRDREKALENFKTGKVRILIATDLASR 549
Query 318 GIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAF---- 373
G+D+ ++ V NFDFP + YVHR GRT RAGR G I+ T D A +++
Sbjct 550 GLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERA 609
Query 374 ---VGGRIVPLAQCMQQQQQQQQ 393
+ +V +A+ + QQ+++
Sbjct 610 NQSIPEELVSMAERFKAHQQKRE 632
> ath:AT4G16630 DEAD/DEAH box helicase, putative (RH28); K13181
ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]
Length=789
Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 193/365 (52%), Gaps = 14/365 (3%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAV-GAR 84
A + LG++ PTP+Q A IPL L GRD TGSGKTAA+ LP L++L V R
Sbjct 181 ACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATR 240
Query 85 ALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL 144
L++ PTREL QIH + L + + I+ ++VGG+S +Q L PD+V TPGR++
Sbjct 241 VLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMI 300
Query 145 -QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLE 203
L+ + L +A +LDEAD+LL+ G+ ++ L ++Q + +A++ + E
Sbjct 301 DHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKE 360
Query 204 FISFGLQNPLFVQV----HKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALV 259
+ L PL + +P L + + +R + + LL L + + + ++
Sbjct 361 LVKLSLNKPLRLSADPSARRPPGLTEEV-VRIRRTREANQEAVLLSL--CTRTFKSKVII 417
Query 260 FVNTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGI 319
F T+ A LK ++F + ++G++ Q R +L FRK+ FLI TDVAARG+
Sbjct 418 FSGTKQAAHRLK-ILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGL 476
Query 320 DISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVG---- 375
DI + VIN+ P YVHR GRTARAGREG ++ T D I VG
Sbjct 477 DIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLK 536
Query 376 GRIVP 380
R++P
Sbjct 537 SRVIP 541
> ath:AT3G01540 DRH1; DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent
RNA helicase/ ATPase
Length=619
Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 188/362 (51%), Gaps = 10/362 (2%)
Query 31 GFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQ--HAAAVGARALVV 88
GF PTP+Q + P+ +QGRD + + +TGSGKT YL+P LQ+ + + +G LV+
Sbjct 177 GFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVL 236
Query 89 APTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQ 148
+PTREL QI A R S I L GG Q L R D+V TPGRL + +
Sbjct 237 SPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILE 296
Query 149 EQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFG 208
+ + L ++ VLDEAD++L+ G+ PQ++ + + K+Q + A+ P + + +
Sbjct 297 MRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADL 356
Query 209 LQNPLFVQVHKPSQL--NQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTRHQ 266
L NP V + +L N+++ + K L +L++ + G + ++F +T+
Sbjct 357 LVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPG-SKVIIFCSTKRM 415
Query 267 AEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELPF 326
+ L + T + I+G Q +R L FR R+ L+ TDVAARG+D+ ++
Sbjct 416 CDQLTRNL--TRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRA 473
Query 327 VINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGG---RIVPLAQ 383
V+N+DFP YVHR GRT RAG G + +D A D++ + G R+ P +
Sbjct 474 VVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIR 533
Query 384 CM 385
M
Sbjct 534 EM 535
> mmu:67755 Ddx47, 4930588A18Rik, C77285; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 47 (EC:3.6.4.13); K14777 ATP-dependent RNA
helicase DDX47/RRP3 [EC:3.6.4.13]
Length=455
Score = 190 bits (483), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 187/354 (52%), Gaps = 6/354 (1%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA 85
A QLG+ PT +Q AIPL LQGRD I + TGSGKT A+ LP+L L + + A
Sbjct 38 ACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFA-- 95
Query 86 LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL- 144
LV+ PTREL QI AL ++ V+VGG+ Q ALA+ P +V TPGRL+
Sbjct 96 LVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLID 155
Query 145 QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEF 204
L+ + L A+ V+DEAD++L + ++ + + ++ +A++ + +
Sbjct 156 HLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKL 215
Query 205 ISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTR 264
L+NP+ V Q + L +LF K L+Y+L L AG ++F +T
Sbjct 216 QRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNEL-AG-NSFMIFCSTC 273
Query 265 HQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISEL 324
+ + L++ + L + ++G M Q R +L F+ + L+ TDVA+RG+DI +
Sbjct 274 NNTQRTALLL-RNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHV 332
Query 325 PFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRI 378
V+NFD P ++ Y+HR GRTARAGR G I+ T D+ I +G ++
Sbjct 333 DVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKL 386
> sce:YGL078C DBP3; Dbp3p (EC:3.6.1.-); K14811 ATP-dependent RNA
helicase DBP3 [EC:3.6.4.13]
Length=523
Score = 190 bits (482), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 199/382 (52%), Gaps = 15/382 (3%)
Query 14 LIHFLFISTAAAAQQQLG-FRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQ 72
L+ F ++S ++ Q ++ F PTP+Q A P LL G+D + V TGSGKT A+ +P +
Sbjct 113 LLSFDYLSLDSSIQAEISKFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAIS 172
Query 73 QLQQHAAAVGARALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARN 132
L G + LV++PTREL QI+ L ++ C + GGV +Q L ++
Sbjct 173 HLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS 232
Query 133 PDLVFGTPGRLLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQ-LLWGALAAKQQGV 191
+V TPGRLL L QE + L+ V VLDEAD++LE G+ ++ ++ A+K+Q +
Sbjct 233 -QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTL 291
Query 192 FVAASLPSSLLEFISFGLQNPLFVQVHKPSQL--NQTLFLRFLFASQTLKVPALLYLLQA 249
A+ P + E S + NP+ V + QL N+ + K LL LL+
Sbjct 292 MFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKK 351
Query 250 LQAG---EQQALVFVNTRHQAEFLKLVIFKTLKINPL---IIYGSMEQRDRTANLAAFRK 303
+G ++ L+F + +A ++ + LK N I+G + Q+ RT L F+
Sbjct 352 YHSGPKKNEKVLIFALYKKEAARVE----RNLKYNGYNVAAIHGDLSQQQRTQALNEFKS 407
Query 304 RRSLFLIVTDVAARGIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPED 363
+S L+ TDVAARG+DI + VIN FP + YVHR GRT RAG+ G ++ T ++
Sbjct 408 GKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQE 467
Query 364 LPFAFDIMAFVGGRIVPLAQCM 385
A ++ + G P+ + +
Sbjct 468 KHLAGGLVNVLNGANQPVPEDL 489
> cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 186/350 (53%), Gaps = 8/350 (2%)
Query 31 GFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALVVAP 90
GF P+ +Q+ AIP +L+ RD I ++G+GKTA + + +LQ L +AL+++P
Sbjct 45 GFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRE--TQALILSP 102
Query 91 TRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQEQ 150
TREL QI V AL +++ +GG + + L +V GTPGR+ + + +
Sbjct 103 TRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 162
Query 151 LLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFGLQ 210
L+ A+ VLDEAD++L G+ QL ++ L Q V ++A+LP +LE S +
Sbjct 163 NLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMT 222
Query 211 NPLFVQVHKPSQLNQTLFLRFLFA--SQTLKVPALLYLLQALQAGEQQALVFVNTRHQAE 268
+P+ + V K +L +F A + K L+ L L QA++F NTR + +
Sbjct 223 DPIRILV-KRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTI--TQAVLFCNTRRKVD 279
Query 269 FLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELPFVI 328
+L + K ++G MEQ+DR + FR + LI TDV ARG+D+ ++ VI
Sbjct 280 WLTDKM-KEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVI 338
Query 329 NFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRI 378
N+D P + +Y+HR GR+ R GR+G I+ +D+ DI + +I
Sbjct 339 NYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQI 388
> ath:AT5G60990 DEAD/DEAH box helicase, putative (RH10); K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=456
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 191/364 (52%), Gaps = 14/364 (3%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQH----AAAV 81
A ++LG++ P+ +Q A+P L+G+D I + +TGSGKT A+ +P+LQ L ++
Sbjct 23 ACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKK 82
Query 82 GAR------ALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDL 135
G R A V++PTREL QI AL S+R VLVGG+ QQ AL + P +
Sbjct 83 GRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHV 142
Query 136 VFGTPGRLL-QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVA 194
+ TPGRL + + L ++ VLDEAD+LL + L + + +++ +
Sbjct 143 IVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERKTFLFS 202
Query 195 ASLPSSLLEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGE 254
A++ + + L+NP+ ++ TL ++ F + K L+Y+L + E
Sbjct 203 ATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMP--E 260
Query 255 QQALVFVNTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDV 314
+++F T FL LV+ ++L + I G M Q R L F+ L+ TDV
Sbjct 261 STSMIFTRTCDGTRFLALVL-RSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDV 319
Query 315 AARGIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFV 374
A+RG+DI + VIN+D P +++ Y+HR GRTARAGR G IS+ +L + I +
Sbjct 320 ASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLI 379
Query 375 GGRI 378
G ++
Sbjct 380 GKKL 383
> hsa:51202 DDX47, DKFZp564O176, E4-DBP, FLJ30012, HQ0256, MSTP162,
RRP3; DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 (EC:3.6.4.13);
K14777 ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=455
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 187/354 (52%), Gaps = 6/354 (1%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA 85
A QLG+ PT +Q AIPL LQGRD I + TGSGKT A+ LP+L L + + A
Sbjct 38 ACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFA-- 95
Query 86 LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL- 144
LV+ PTREL QI AL ++ V+VGG+ Q ALA+ P ++ TPGRL+
Sbjct 96 LVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLID 155
Query 145 QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEF 204
L+ + L A+ V+DEAD++L + ++ + + ++ +A++ + +
Sbjct 156 HLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKL 215
Query 205 ISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTR 264
L+NP+ V Q + L ++F K L+Y+L L AG ++F +T
Sbjct 216 QRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYILNEL-AG-NSFMIFCSTC 273
Query 265 HQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISEL 324
+ + L++ + L + ++G M Q R +L F+ + L+ TDVA+RG+DI +
Sbjct 274 NNTQRTALLL-RNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHV 332
Query 325 PFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRI 378
V+NFD P ++ Y+HR GRTARAGR G I+ T D+ I +G ++
Sbjct 333 DVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKL 386
> cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 186/350 (53%), Gaps = 8/350 (2%)
Query 31 GFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARALVVAP 90
GF P+ +Q+ A+P +L+ RD I ++G+GKTA + + +LQ L +AL+++P
Sbjct 45 GFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRE--TQALILSP 102
Query 91 TRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQEQ 150
TREL QI V AL +++ +GG + + L +V GTPGR+ + + +
Sbjct 103 TRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 162
Query 151 LLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFGLQ 210
L+ A+ VLDEAD++L G+ QL ++ L Q V ++A+LP +LE S +
Sbjct 163 NLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMT 222
Query 211 NPLFVQVHKPSQLNQTLFLRFLFA--SQTLKVPALLYLLQALQAGEQQALVFVNTRHQAE 268
+P+ + V K +L +F A + K L+ L L QA++F NTR + +
Sbjct 223 DPIRILV-KRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTI--TQAVLFCNTRRKVD 279
Query 269 FLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELPFVI 328
+L + K ++G MEQ+DR + FR + LI TDV ARG+D+ ++ VI
Sbjct 280 WLTDKM-KEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVI 338
Query 329 NFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRI 378
N+D P + +Y+HR GR+ R GR+G I+ +D+ DI + +I
Sbjct 339 NYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQI 388
> sce:YNL112W DBP2; Dbp2p (EC:3.6.1.-); K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=546
Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 178/343 (51%), Gaps = 16/343 (4%)
Query 31 GFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQH---AAAVGARALV 87
GF PT +Q P+ L GRD + + TGSGKT +Y LP + + A G LV
Sbjct 132 GFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLV 191
Query 88 VAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQ 147
+APTREL QI + S IR + GGV +QQ L+R ++V TPGRL+ +
Sbjct 192 LAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDML 251
Query 148 QEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISF 207
+ L V VLDEAD++L+ G+ PQ++ + + +Q + +A+ P + + +
Sbjct 252 EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAAD 311
Query 208 GLQNPLFVQVHK---PSQLNQTLFLRFLFASQTLKVPAL-LYLLQALQAGEQQALVFVNT 263
L +P+ VQV + N T + + S K L YL A Q E + L+F +T
Sbjct 312 YLNDPIQVQVGSLELSASHNITQIVEVV--SDFEKRDRLNKYLETASQDNEYKTLIFAST 369
Query 264 RHQAEFLKLVIFKTLKIN---PLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGID 320
+ + I K L+ + L I+G +QR+R L FR RS ++ TDVAARGID
Sbjct 370 KRMCD----DITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGID 425
Query 321 ISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPED 363
+ + +VIN+D P + YVHR GRT RAG G IS T ++
Sbjct 426 VKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQN 468
> dre:30263 vasa, MGC158535, fi24g05, vas, vlg, wu:fi24g05, zgc:109812,
zgc:158535; vasa homolog (EC:3.6.4.13); K13982 probable
ATP-dependent RNA helicase DDX4 [EC:3.6.4.13]
Length=716
Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/371 (34%), Positives = 201/371 (54%), Gaps = 26/371 (7%)
Query 29 QLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGA----- 83
+ G+ PTPVQ+ IP++ GRD + +TGSGKTAA+LLP+LQ+ A
Sbjct 294 KSGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQRFMTDGVAASKFSEIQ 353
Query 84 --RALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPG 141
A++VAPTREL+ QI+ A + +R V+ GG++ + + +++ TPG
Sbjct 354 EPEAIIVAPTRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIREVLKGCNVLCATPG 413
Query 142 RLLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGA--LAAKQ--QGVFVAASL 197
RL L + L+ V VLDEAD++L+ G+ P+++ L + + +K+ Q + +A+
Sbjct 414 RLHDLIGRGKIGLSKVRYLVLDEADRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSATY 473
Query 198 PSSLLEFISFGLQ-NPLFVQVH----KPSQLNQTLFLRFLFASQTLKVPALLYLLQALQA 252
P + + L+ + +F+ V S + QT+ + Q K LL LL+A
Sbjct 474 PEDIQRMAADFLKVDYIFLAVGVVGGACSDVEQTV----VQVDQYSKRDQLLELLRA--T 527
Query 253 GEQQALVFVNTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVT 312
G ++ +VFV T+ A+F+ + + KI+ I+G EQR+R L+ FR L+ T
Sbjct 528 GNERTMVFVETKRSADFIATFLCQE-KISTTSIHGDREQREREKALSDFRLGHCPVLVAT 586
Query 313 DVAARGIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPE-DLPFAFDIM 371
VAARG+DI ++ V+NFD P+S YVHR GRT R G G +S PE D P A ++
Sbjct 587 SVAARGLDIEQVQHVVNFDMPSSIDEYVHRIGRTGRCGNTGRAVSFFNPESDTPLARSLV 646
Query 372 AFVGG--RIVP 380
+ G ++VP
Sbjct 647 KVLSGAQQVVP 657
> sce:YPL119C DBP1, LPH8; Dbp1p (EC:3.6.1.-); K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=617
Score = 187 bits (474), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 175/344 (50%), Gaps = 22/344 (6%)
Query 32 FRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQL--------QQHAAAVGA 83
F PTPVQ+ +IP++ +GRD + +TGSGKT +L PL +L + A + +
Sbjct 174 FTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYS 233
Query 84 R-----ALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFG 138
R ALV+APTREL QI A S +R CV+ GG Q + R DL+
Sbjct 234 RKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVA 293
Query 139 TPGRLLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGAL----AAKQQGVFVA 194
TPGRL L + + LA + VLDEAD++L+ G+ PQ++ + +Q + +
Sbjct 294 TPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFS 353
Query 195 ASLPSSLLEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGE 254
A+ P + L N +F+ V + ++ + R L+ K ALL LL A G
Sbjct 354 ATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLLSAEHKG- 412
Query 255 QQALVFVNTRHQAEFL-KLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTD 313
L+FV T+ A+ L +I + K I+G Q +R L+AF+ + L+ T
Sbjct 413 -LTLIFVETKRMADQLTDFLIMQNFKA--TAIHGDRTQAERERALSAFKANVADILVATA 469
Query 314 VAARGIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVIS 357
VAARG+DI + VIN+D P+ YVHR GRT RAG G S
Sbjct 470 VAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATS 513
> ath:AT2G42520 DEAD box RNA helicase, putative; K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=633
Score = 187 bits (474), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 128/377 (33%), Positives = 189/377 (50%), Gaps = 35/377 (9%)
Query 35 PTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQL--QQHA-AAVGAR-----AL 86
PTPVQR AIP+LL+GRD + +TGSGKTAA+ P++ + QH G+R A+
Sbjct 182 PTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAV 241
Query 87 VVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQL 146
+++PTREL QIH A + ++V V GG QQ L R D++ TPGRL L
Sbjct 242 ILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDL 301
Query 147 QQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGV----FVAASLPSSLL 202
+ + + + LDEAD++L+ G+ PQ++ + + +GV +A+ P +
Sbjct 302 LERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQ 361
Query 203 EFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQA-----LQAGEQQA 257
+ L N +F+ V + + R F + K L+ LL A +Q +
Sbjct 362 RLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALT 421
Query 258 LVFVNTRHQAEFLKLVIFKTLKINPL---IIYGSMEQRDRTANLAAFRKRRSLFLIVTDV 314
LVFV T+ A+ L+ L IN I+G Q++R L AF+ R+ L+ TDV
Sbjct 422 LVFVETKRGADSLE----NWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDV 477
Query 315 AARGIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFV 374
AARG+DI + V+NFD P YVHR GRT RAG+ G + + A
Sbjct 478 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLA------- 530
Query 375 GGRIVPLAQCMQQQQQQ 391
PLA+ MQ+ Q+
Sbjct 531 ----RPLAELMQEANQE 543
> hsa:54514 DDX4, MGC111074, VASA; DEAD (Asp-Glu-Ala-Asp) box
polypeptide 4 (EC:3.6.4.13); K13982 probable ATP-dependent RNA
helicase DDX4 [EC:3.6.4.13]
Length=690
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 192/358 (53%), Gaps = 22/358 (6%)
Query 13 NLIHFLFISTAAAAQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQ 72
NL L + A A +L TPVQ+ +IP++L GRD + +TGSGKTAA+LLP+L
Sbjct 260 NLCQTLNNNIAKAGYTKL-----TPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILA 314
Query 73 QLQQHAAAVGAR--------ALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQ 124
+ H +R ++VAPTRELV QI+ A + +R V+ GG
Sbjct 315 HMM-HDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGH 373
Query 125 QFEALARNPDLVFGTPGRLLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWG-- 182
+ + +++ TPGRL+ + ++ + L + VLDEAD++L+ G+GP+++ L
Sbjct 374 SIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCP 433
Query 183 ALAAKQQ--GVFVAASLPSSLLEFIS-FGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLK 239
+ +K+Q + +A+ P + + F N LFV V + + + L Q K
Sbjct 434 GMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSK 493
Query 240 VPALLYLLQALQAGEQQALVFVNTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLA 299
L+ +L+ + G+++ +VFV T+ +A+F+ + + KI+ I+G EQR+R L
Sbjct 494 REKLVEILRNI--GDERTMVFVETKKKADFIATFLCQE-KISTTSIHGDREQREREQALG 550
Query 300 AFRKRRSLFLIVTDVAARGIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVIS 357
FR + L+ T VAARG+DI + VINFD P++ YVHR GRT R G G IS
Sbjct 551 DFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAIS 608
> ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=733
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 182/369 (49%), Gaps = 28/369 (7%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQ------LQQHAA 79
A ++ G++ P+P+Q AAIPL LQ RD I + TGSGKTAA++LP+L + +
Sbjct 327 AVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENE 386
Query 80 AVGARALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGT 139
G A+V+APTREL QQI RV +VGG S +Q + + ++V T
Sbjct 387 TEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIAT 446
Query 140 PGRLLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAK------------ 187
PGRL+ + + L VLDEAD++++ G+ PQ+ + A+ +
Sbjct 447 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELD 506
Query 188 -----QQGVFVAASLPSSLLEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPA 242
+ +A++P + L+NP+ V + + + + ++ K
Sbjct 507 EKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFR 566
Query 243 LLYLLQALQAGEQQALVFVNTRHQAEFLKLVIFKT-LKINPLIIYGSMEQRDRTANLAAF 301
L LL L GE+ A+VFVNT+ + + + K ++ L +G Q R +L F
Sbjct 567 LQKLLDEL--GEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTL--HGGKSQEQREISLEGF 622
Query 302 RKRRSLFLIVTDVAARGIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTP 361
R +R L+ TDV RGIDI ++ VIN+D P +Y HR GRT RAG+ G S T
Sbjct 623 RAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTL 682
Query 362 EDLPFAFDI 370
D +D+
Sbjct 683 HDTEVFYDL 691
> ath:AT5G14610 ATP binding / ATP-dependent helicase/ helicase/
nucleic acid binding / protein binding
Length=712
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 183/350 (52%), Gaps = 7/350 (2%)
Query 31 GFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQ--HAAAVGARALVV 88
GF P+P+Q + P+ +Q RD + + +TGSGKT YL+P LQ+ + + +G LV+
Sbjct 248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMGPTILVL 307
Query 89 APTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQ 148
+PTREL QI A + S I L GG Q + + R D+V TPGRL + +
Sbjct 308 SPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILE 367
Query 149 EQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFG 208
+ + L V+ VLDEAD++L+ G+ PQ++ + + K+Q + A+ P + + +
Sbjct 368 MKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADL 427
Query 209 LQNPLFVQVHKPSQL--NQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTRHQ 266
L NP V + +L N+++ + K L +L++ + G + ++F +T+
Sbjct 428 LVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPG-SKIIIFCSTKRM 486
Query 267 AEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISELPF 326
+ L + +T I+G Q +R L FR R+ L+ TDVAARG+D+ ++
Sbjct 487 CDQLARNLTRTFGA--AAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRV 544
Query 327 VINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGG 376
V+N+DFP YVHR GRT RAG G + +D A D++ + G
Sbjct 545 VVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEG 594
> eco:b2576 srmB, ECK2574, JW2560, rbaB, rhlA; ATP-dependent RNA
helicase (EC:2.7.7.-); K05590 ATP-dependent RNA helicase
SrmB [EC:2.7.7.-]
Length=444
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 182/343 (53%), Gaps = 9/343 (2%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQ--HAAAVGA 83
A Q GF PT +Q AAIP L GRD + TG+GKTAAYLLP LQ L +
Sbjct 18 ALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPP 77
Query 84 RALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRL 143
R L++ PTREL Q+ A L + + + + + GGV+Y E + N D+V T GRL
Sbjct 78 RILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRL 137
Query 144 LQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLL- 202
LQ +E+ AV +LDEAD++L+ G+ ++ + G ++Q + +A+L +
Sbjct 138 LQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQ 197
Query 203 EFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTL--KVPALLYLLQALQAGEQQALVF 260
+F L++P+ V + PS + ++ + + L K L++LL+ +A +++VF
Sbjct 198 DFAERLLEDPVEVSAN-PSTRERKKIHQWYYRADDLEHKTALLVHLLKQPEA--TRSIVF 254
Query 261 VNTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGID 320
V R + L + IN + G M Q R + + R L+ TDVAARGID
Sbjct 255 VRKRERVHEL-ANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGID 313
Query 321 ISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPED 363
I ++ V NFD P S Y+HR GRTARAGR+G IS+ D
Sbjct 314 IPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHD 356
> hsa:1654 DDX3X, DBX, DDX14, DDX3, HLP2; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 3, X-linked (EC:3.6.4.13); K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=661
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 178/360 (49%), Gaps = 22/360 (6%)
Query 32 FRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA------ 85
+ PTPVQ+ AIP++ + RD + +TGSGKTAA+LLP+L Q+ RA
Sbjct 200 YTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGR 259
Query 86 ----------LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDL 135
LV+APTREL QI+ A S +R CV+ GG QQ L R L
Sbjct 260 YGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHL 319
Query 136 VFGTPGRLLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGV---- 191
+ TPGRL+ + + + L VLDEAD++L+ G+ PQ++ + +GV
Sbjct 320 LVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTM 379
Query 192 FVAASLPSSLLEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQ 251
+A+ P + L +F+ V + ++ + + ++ ++ K LL LL A
Sbjct 380 MFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT- 438
Query 252 AGEQQALVFVNTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIV 311
+ LVFV T+ A+ L+ ++ I+G QRDR L FR +S L+
Sbjct 439 GKDSLTLVFVETKKGADSLEDFLYHE-GYACTSIHGDRSQRDREEALHQFRSGKSPILVA 497
Query 312 TDVAARGIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIM 371
T VAARG+DIS + VINFD P+ YVHR GRT R G G S ++ D++
Sbjct 498 TAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLL 557
> mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C80929,
Gm926, MGC79147, p72; DEAD (Asp-Glu-Ala-Asp) box polypeptide
17 (EC:3.6.4.13); K13178 ATP-dependent RNA helicase DDX17
[EC:3.6.4.13]
Length=650
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 181/347 (52%), Gaps = 10/347 (2%)
Query 32 FRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQH---AAAVGARALVV 88
F PTP+Q PL L GRD + + +TGSGKT AYLLP + + G LV+
Sbjct 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVL 171
Query 89 APTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLLQLQQ 148
APTREL QQ+ VA +CS ++ + GG Q L R ++ TPGRL+ +
Sbjct 172 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 231
Query 149 EQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEFISFG 208
L VLDEAD++L+ G+ PQ++ + + +Q + +A+ P + +
Sbjct 232 SGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDF 291
Query 209 LQNPLFVQVHKPS---QLNQTLFLRFLFASQTLKVPALLYLLQALQA-GEQQALVFVNTR 264
L++ + Q++ + N + ++ K L+ L++ + A E + ++FV T+
Sbjct 292 LRD--YTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETK 349
Query 265 HQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISEL 324
+ + L + + + I+G Q +R L FR ++ LI TDVA+RG+D+ ++
Sbjct 350 RRCDDLTRRMRRD-GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDV 408
Query 325 PFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIM 371
FVIN+D+P S+ YVHR GRTAR+ +G + TP +L A +++
Sbjct 409 KFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELI 455
> xla:397935 an3; ATP dependent RNA helicase (EC:3.6.4.13); K11594
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=697
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 181/360 (50%), Gaps = 22/360 (6%)
Query 32 FRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQ-----------QHAAA 80
+ PTPVQ+ AIP++++ RD + +TGSGKTAA+LLP+L Q+ Q
Sbjct 241 YTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDAMKHLQENGR 300
Query 81 VGAR-----ALVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDL 135
G R +LV+APTREL QI+ A S +R CV+ GG QQ L R L
Sbjct 301 YGRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHL 360
Query 136 VFGTPGRLLQLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGV---- 191
+ TPGRL+ + + + L VLDEAD++L+ G+ PQ++ + +GV
Sbjct 361 LVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRQTM 420
Query 192 FVAASLPSSLLEFISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQ 251
+A+ P + L +F+ V + ++ + + ++ + K LL LL A
Sbjct 421 MFSATFPKEIQILARDFLDEYIFLAVGRVGSTSENITQKVVWVEEMDKRSFLLDLLNAT- 479
Query 252 AGEQQALVFVNTRHQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIV 311
+ LVFV T+ A+ L+ ++ I+G QRDR L FR +S L+
Sbjct 480 GKDSLTLVFVETKKGADALEDFLYHE-GYACTSIHGDRSQRDREEALHQFRSGKSPILVA 538
Query 312 TDVAARGIDISELPFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIM 371
T VAARG+DIS + VINFD P+ YVHR GRT R G G S +++ D++
Sbjct 539 TAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLL 598
> dre:553715 MGC112350; zgc:112350 (EC:3.6.4.13); K14777 ATP-dependent
RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=512
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 184/354 (51%), Gaps = 6/354 (1%)
Query 26 AQQQLGFRVPTPVQRAAIPLLLQGRDCIIVGRTGSGKTAAYLLPLLQQLQQHAAAVGARA 85
A QLG++ PT +Q AIP+ LQGRD I + TGSGKT A+ +P+LQ L A A
Sbjct 93 ACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFAVPVLQSLL--ACAQRLHT 150
Query 86 LVVAPTRELVQQIHGVAAALLRCSSIRVCVLVGGVSYAQQFEALARNPDLVFGTPGRLL- 144
LV+ PTREL QI AL ++ V+VGG+ Q LA+ P +V TPGRL+
Sbjct 151 LVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQALVLAKKPHVVIATPGRLID 210
Query 145 QLQQEQLLQLAAVAAAVLDEADKLLEAGWGPQLQLLWGALAAKQQGVFVAASLPSSLLEF 204
++ + L A+ V+DEAD++L + ++ + + ++ +A++ + +
Sbjct 211 HMENTKGFNLRALKYLVMDEADRILNMDFESEVDKILKVIPRDRRTFLFSATMTKKVQKL 270
Query 205 ISFGLQNPLFVQVHKPSQLNQTLFLRFLFASQTLKVPALLYLLQALQAGEQQALVFVNTR 264
LQ+P+ V L ++F K L+ +L L AG +VF T
Sbjct 271 QRAALQDPVKCSVSSKYATVDKLQQFYIFIPSKYKDCYLVSILNEL-AG-NSFMVFCGTC 328
Query 265 HQAEFLKLVIFKTLKINPLIIYGSMEQRDRTANLAAFRKRRSLFLIVTDVAARGIDISEL 324
+ + + L + + L I + ++G M Q R L F+ + L+ TDVA+RG+DI +
Sbjct 329 NNTQRVAL-LLRNLGITAIPLHGQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHV 387
Query 325 PFVINFDFPASARVYVHRAGRTARAGREGCVISITTPEDLPFAFDIMAFVGGRI 378
VINFD P ++ Y+HR GRTARAGR G I+ T D+ I A +G ++
Sbjct 388 DCVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIEALIGKKL 441
Lambda K H
0.327 0.139 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 17556908744
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40