bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_3408_orf2
Length=270
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_062070 ribosomal RNA assembly protein, putative ; K... 353 5e-97
cpv:cgd3_2950 ribosomal RNA assembly protein mis3/dribble/Krr1... 296 5e-80
sce:YCL059C KRR1; Essential nucleolar protein required for the... 296 8e-80
tpv:TP02_0631 hypothetical protein; K06961 ribosomal RNA assem... 293 3e-79
bbo:BBOV_II006650 18.m06544; Ribosomal RNA assembly protein mi... 284 2e-76
xla:399412 krr1, hrb2; KRR1, small subunit (SSU) processome co... 275 1e-73
ath:AT5G08420 RNA binding; K06961 ribosomal RNA assembly protein 269 8e-72
pfa:PFB0370c RNA binding protein, putative; K06961 ribosomal R... 266 4e-71
hsa:11103 KRR1, HRB2, RIP-1; KRR1, small subunit (SSU) process... 265 2e-70
mmu:52705 Krr1, 2610511F02Rik, AI255219, AI428520, D10Ertd773e... 264 2e-70
dre:724049 krr1, zgc:136398; KRR1, small subunit (SSU) process... 263 6e-70
cel:C05C8.2 hypothetical protein; K06961 ribosomal RNA assembl... 253 6e-67
xla:379129 pno1, MGC53417; partner of NOB1 homolog; K11884 RNA... 38.1 0.033
pfa:PF14_0661 conserved Plasmodium protein, unknown function; ... 38.1 0.037
hsa:56902 PNO1, KHRBP1, RRP20; partner of NOB1 homolog (S. cer... 36.2 0.14
mmu:140482 Zfp358, Zfend; zinc finger protein 358 32.7
tgo:TGME49_090680 hypothetical protein 32.0 2.4
dre:393520 pno1, MGC65782, zgc:65782, zgc:77265; partner of NO... 30.8 4.9
pfa:PFC0210c circumsporozoite (CS) protein; K13836 circumsporo... 30.8 5.7
dre:100319219 si:ch211-262h13.4 30.4 6.6
> tgo:TGME49_062070 ribosomal RNA assembly protein, putative ;
K06961 ribosomal RNA assembly protein
Length=394
Score = 353 bits (905), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 165/254 (64%), Positives = 199/254 (78%), Gaps = 16/254 (6%)
Query 17 RRKKGPGPPSDDEAQTPNPNANPNPNPDANPNSNPDSGGPTADSSSSSSSSSKKGKYRKD 76
++K+G P+++E P+ A + G P A K+GKYR+D
Sbjct 4 KKKRGQQGPTEEETDGPSVEAK----------TEETEGKPAA------KKEGKRGKYRRD 47
Query 77 KPWDTDDIEHWKIEPFRPEDNPFGLCEESSFAVLFPKYREKYLKEIWREVQKELSVHFVA 136
KPWDTDD++HWKIE F+PE NP G+ EESSFA LFP+YREKYLKE+W EV++ L HFV
Sbjct 48 KPWDTDDVDHWKIEEFKPEHNPGGMLEESSFACLFPQYREKYLKEVWPEVKRALGQHFVK 107
Query 137 AELDLAEGSMTVRTTKKTFDPYIILKARDMIKLLARCVPLQQAKKILEDDMMCDIIKIKG 196
AELDL EGSMTVRTTKKTFDPYII+KARDMIKLLAR VP+ QA+KIL+D M CDIIKI G
Sbjct 108 AELDLIEGSMTVRTTKKTFDPYIIIKARDMIKLLARSVPIAQARKILDDGMFCDIIKIGG 167
Query 197 MVRNKEKFVKRRQRLVGPNGSTLKALELLSCCYILVQGQTVAAMGSPKGLKQVRRVVEDC 256
MVRNKEKFVKRRQRLVGPNGSTLKA+ELL+ CY+LVQGQTV+ MG+ KG+K V+R+VEDC
Sbjct 168 MVRNKEKFVKRRQRLVGPNGSTLKAIELLTKCYVLVQGQTVSVMGTHKGIKVVQRLVEDC 227
Query 257 MQNVHPVYHVKELL 270
M+N+HPVYH+KEL+
Sbjct 228 MKNIHPVYHIKELM 241
> cpv:cgd3_2950 ribosomal RNA assembly protein mis3/dribble/Krr1p.
KH domain ; K06961 ribosomal RNA assembly protein
Length=358
Score = 296 bits (759), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 142/208 (68%), Positives = 169/208 (81%), Gaps = 7/208 (3%)
Query 68 SKKGKYRKDKPWDTDDIEHWKIEPFRPEDNPFGLCEESSFAVLFPKYREKYLKEIWREVQ 127
SKK +YRKDKPWDTDDI+HW + PEDNP GL EESSFAVLFPKYREKYL++IW +++
Sbjct 17 SKKRRYRKDKPWDTDDIDHWNVPKLTPEDNPHGLLEESSFAVLFPKYREKYLRDIWPDIR 76
Query 128 KELSVHFVAAELDLAEGSMTVRTTKKTFDPYIILKARDMIKLLARCVPLQQAKKIL---E 184
L H + ELDL EGS+TVRTT KT+DP+II++ARDM+KLL+R VP QA +IL E
Sbjct 77 NALKAHHIKCELDLVEGSITVRTTGKTWDPFIIIRARDMVKLLSRSVPFHQAVRILGEGE 136
Query 185 DD--MMCDIIKIKGMVRNKEKFVKRRQRLVGPNGSTLKALELLSCCYILVQGQTVAAMGS 242
DD + CDIIKI RNKEK VKRRQRLVGPNGSTLKA+ELL+ CY+LVQGQTV+ +GS
Sbjct 137 DDNNLGCDIIKIGH--RNKEKMVKRRQRLVGPNGSTLKAIELLTNCYVLVQGQTVSVIGS 194
Query 243 PKGLKQVRRVVEDCMQNVHPVYHVKELL 270
K LK VRR+VEDCM N+HPVYH+KEL+
Sbjct 195 YKSLKLVRRIVEDCMNNIHPVYHIKELM 222
> sce:YCL059C KRR1; Essential nucleolar protein required for the
synthesis of 18S rRNA and for the assembly of 40S ribosomal
subunit; K06961 ribosomal RNA assembly protein
Length=316
Score = 296 bits (757), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 140/200 (70%), Positives = 163/200 (81%), Gaps = 2/200 (1%)
Query 73 YRKDKPWDTDDIEHWKIEPFRPEDNPFG--LCEESSFAVLFPKYREKYLKEIWREVQKEL 130
+ +DKPWDTDDI+ WKIE F+ EDN G EESSF LFPKYRE YLK IW +V + L
Sbjct 5 HNRDKPWDTDDIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRAL 64
Query 131 SVHFVAAELDLAEGSMTVRTTKKTFDPYIILKARDMIKLLARCVPLQQAKKILEDDMMCD 190
H +A LDL EGSMTV+TT+KT+DP IILKARD+IKLLAR VP QA KIL+DDM CD
Sbjct 65 DKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMACD 124
Query 191 IIKIKGMVRNKEKFVKRRQRLVGPNGSTLKALELLSCCYILVQGQTVAAMGSPKGLKQVR 250
+IKI V NKE+FVKRRQRLVGPNG+TLKALELL+ CYILVQG TV+AMG KGLK+VR
Sbjct 125 VIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEVR 184
Query 251 RVVEDCMQNVHPVYHVKELL 270
RVVEDCM+N+HP+YH+KEL+
Sbjct 185 RVVEDCMKNIHPIYHIKELM 204
> tpv:TP02_0631 hypothetical protein; K06961 ribosomal RNA assembly
protein
Length=349
Score = 293 bits (751), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 168/203 (82%), Gaps = 0/203 (0%)
Query 68 SKKGKYRKDKPWDTDDIEHWKIEPFRPEDNPFGLCEESSFAVLFPKYREKYLKEIWREVQ 127
S+ KYR+DKPWD D I+HWKIEPF E+N L EESSF +LFPKYREKY++ +W +V+
Sbjct 6 SRHRKYRRDKPWDDDTIDHWKIEPFTKEENEPSLVEESSFRILFPKYREKYIQSVWGDVK 65
Query 128 KELSVHFVAAELDLAEGSMTVRTTKKTFDPYIILKARDMIKLLARCVPLQQAKKILEDDM 187
LS + + ELDL EGSMTV TT KT+DPYII+KARD+IKLLAR VP QAK+IL+D +
Sbjct 66 NCLSQYHINCELDLLEGSMTVITTDKTWDPYIIIKARDLIKLLARSVPFPQAKRILDDGV 125
Query 188 MCDIIKIKGMVRNKEKFVKRRQRLVGPNGSTLKALELLSCCYILVQGQTVAAMGSPKGLK 247
CDIIKI G++RNK+KF+KRRQRLVGP GSTLKALELL+ CYIL QGQTV+ +GS KG+K
Sbjct 126 YCDIIKIGGLIRNKDKFIKRRQRLVGPGGSTLKALELLTECYILTQGQTVSVIGSIKGIK 185
Query 248 QVRRVVEDCMQNVHPVYHVKELL 270
VR++VEDC+ N+HPVY++KEL+
Sbjct 186 TVRKIVEDCIYNIHPVYYIKELI 208
> bbo:BBOV_II006650 18.m06544; Ribosomal RNA assembly protein
mis3; K06961 ribosomal RNA assembly protein
Length=342
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 165/200 (82%), Gaps = 0/200 (0%)
Query 71 GKYRKDKPWDTDDIEHWKIEPFRPEDNPFGLCEESSFAVLFPKYREKYLKEIWREVQKEL 130
KYR+DKPWD + I+HWK+E F EDN L EESSF LFPKYREKY++ IW +V++ L
Sbjct 8 NKYRRDKPWDDETIDHWKVESFTEEDNKPPLLEESSFVTLFPKYREKYIQSIWGDVKRAL 67
Query 131 SVHFVAAELDLAEGSMTVRTTKKTFDPYIILKARDMIKLLARCVPLQQAKKILEDDMMCD 190
+ + ELDL EGSM+V TTKKT+DPYII+KARDMIKL+AR VP QAK+ILED + CD
Sbjct 68 GNYHIKCELDLVEGSMSVLTTKKTWDPYIIIKARDMIKLIARSVPFHQAKRILEDGVYCD 127
Query 191 IIKIKGMVRNKEKFVKRRQRLVGPNGSTLKALELLSCCYILVQGQTVAAMGSPKGLKQVR 250
I+KI GM+RNK+KF+KRRQRLVGP GSTLKALELL+ CYIL QGQTV+ +GS KG+K R
Sbjct 128 IVKIGGMLRNKDKFIKRRQRLVGPGGSTLKALELLTQCYILTQGQTVSIIGSIKGIKIAR 187
Query 251 RVVEDCMQNVHPVYHVKELL 270
R+VEDCM+N+HPVYH+KEL+
Sbjct 188 RIVEDCMKNIHPVYHIKELM 207
> xla:399412 krr1, hrb2; KRR1, small subunit (SSU) processome
component, homolog; K06961 ribosomal RNA assembly protein
Length=372
Score = 275 bits (704), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 167/217 (76%), Gaps = 4/217 (1%)
Query 58 ADSSSSSSSSSKKGKYRKDKPWDTDDI----EHWKIEPFRPEDNPFGLCEESSFAVLFPK 113
A+ S + + K K R+ + + ++ + WK EPF EDNP GL EESSFA LFPK
Sbjct 2 AEKEQSVVAEASKKKKREAQLVEESELLTVPDGWKEEPFSKEDNPRGLLEESSFATLFPK 61
Query 114 YREKYLKEIWREVQKELSVHFVAAELDLAEGSMTVRTTKKTFDPYIILKARDMIKLLARC 173
YRE YLKE W VQK L+ FV AELDL EGSMTV TTKKTFDPY+I++ARD+IKLLAR
Sbjct 62 YREAYLKECWPLVQKALNDSFVKAELDLIEGSMTVTTTKKTFDPYVIVRARDLIKLLARS 121
Query 174 VPLQQAKKILEDDMMCDIIKIKGMVRNKEKFVKRRQRLVGPNGSTLKALELLSCCYILVQ 233
VP +QA +IL+DDM CDIIKI +VRN+E+F+KRRQRL+GP GSTLKALELL+ CYI+VQ
Sbjct 122 VPFEQAVRILQDDMACDIIKIGSLVRNRERFIKRRQRLLGPKGSTLKALELLTNCYIMVQ 181
Query 234 GQTVAAMGSPKGLKQVRRVVEDCMQNVHPVYHVKELL 270
G TV+A+G GLK+VR+VV D M+N+HP+Y++K L+
Sbjct 182 GNTVSALGPFGGLKEVRKVVSDTMKNIHPIYNIKALM 218
> ath:AT5G08420 RNA binding; K06961 ribosomal RNA assembly protein
Length=391
Score = 269 bits (687), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 130/195 (66%), Positives = 157/195 (80%), Gaps = 2/195 (1%)
Query 78 PWDTD-DIEHWKIEPFRPEDNPFGLCEESSFAVLFPKYREKYLKEIWREVQKELSVHFVA 136
PWD D +I+ W IE F P NP G+ E S+F+ LFP+YREKYL+E W V+ L + VA
Sbjct 29 PWDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLFPQYREKYLQECWPRVESALKEYGVA 88
Query 137 AELDLAEGSMTVRTTKKTFDPYIILKARDMIKLLARCVPLQQAKKILEDDMMCDIIKIKG 196
+L+L EGSMTV TT+KT DPYII+KARD+IKLL+R VP QA KILED++ CDIIKI
Sbjct 89 CKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILEDEVQCDIIKIGN 148
Query 197 MVRNKEKFVKRRQRLVGPNGSTLKALELLSCCYILVQGQTVAAMGSPKGLKQVRRVVEDC 256
+VRNKE+FVKRRQRLVGPN STLKALE+L+ CYILVQG TVAAMG KGLKQ+RR+VEDC
Sbjct 149 LVRNKERFVKRRQRLVGPNSSTLKALEILTNCYILVQGSTVAAMGPFKGLKQLRRIVEDC 208
Query 257 MQNV-HPVYHVKELL 270
+QN+ HPVYH+K L+
Sbjct 209 VQNIMHPVYHIKTLM 223
> pfa:PFB0370c RNA binding protein, putative; K06961 ribosomal
RNA assembly protein
Length=300
Score = 266 bits (681), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 151/193 (78%), Gaps = 0/193 (0%)
Query 78 PWDTDDIEHWKIEPFRPEDNPFGLCEESSFAVLFPKYREKYLKEIWREVQKELSVHFVAA 137
PWD ++I+HWK+E F EDN EESSF VLFPKYREKYL++ +++ L+ HF+
Sbjct 20 PWDNENIDHWKVEKFTQEDNKHHFLEESSFKVLFPKYREKYLQQFSSDIKNVLNKHFIKF 79
Query 138 ELDLAEGSMTVRTTKKTFDPYIILKARDMIKLLARCVPLQQAKKILEDDMMCDIIKIKGM 197
E+DL EG M V+TTKKTFDPYII+K+RDMI LL+R VP AK++LED+ CDIIKI G
Sbjct 80 EIDLIEGYMCVKTTKKTFDPYIIIKSRDMISLLSRSVPFVHAKRVLEDETYCDIIKISGY 139
Query 198 VRNKEKFVKRRQRLVGPNGSTLKALELLSCCYILVQGQTVAAMGSPKGLKQVRRVVEDCM 257
VRNK KF+KRRQRL+G N +TLKALE+L+ CYI + G+TV+ +G K LK VRR++ DCM
Sbjct 140 VRNKNKFIKRRQRLLGSNATTLKALEILTNCYICIHGKTVSVIGHFKSLKVVRRIIIDCM 199
Query 258 QNVHPVYHVKELL 270
+N+HPVYH+KEL+
Sbjct 200 KNIHPVYHIKELI 212
> hsa:11103 KRR1, HRB2, RIP-1; KRR1, small subunit (SSU) processome
component, homolog (yeast); K06961 ribosomal RNA assembly
protein
Length=381
Score = 265 bits (676), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 160/209 (76%), Gaps = 8/209 (3%)
Query 70 KGKYR--KDKPWDTDDIE------HWKIEPFRPEDNPFGLCEESSFAVLFPKYREKYLKE 121
K ++R K KP + D+ E WK F EDNP GL EESSFA LFPKYRE YLKE
Sbjct 15 KSEFRNQKPKPENQDESELLTVPDGWKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKE 74
Query 122 IWREVQKELSVHFVAAELDLAEGSMTVRTTKKTFDPYIILKARDMIKLLARCVPLQQAKK 181
W VQK L+ H V A LDL EGSMTV TTKKTFDPYII++ARD+IKLLAR V +QA +
Sbjct 75 CWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVR 134
Query 182 ILEDDMMCDIIKIKGMVRNKEKFVKRRQRLVGPNGSTLKALELLSCCYILVQGQTVAAMG 241
IL+DD+ CDIIKI +VRNKE+FVKRRQRL+GP GSTLKALELL+ CYI+VQG TV+A+G
Sbjct 135 ILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIG 194
Query 242 SPKGLKQVRRVVEDCMQNVHPVYHVKELL 270
GLK+VR+VV D M+N+HP+Y++K L+
Sbjct 195 PFSGLKEVRKVVLDTMKNIHPIYNIKSLM 223
> mmu:52705 Krr1, 2610511F02Rik, AI255219, AI428520, D10Ertd773e,
Hrb2; KRR1, small subunit (SSU) processome component, homolog
(yeast); K06961 ribosomal RNA assembly protein
Length=380
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/184 (67%), Positives = 149/184 (80%), Gaps = 0/184 (0%)
Query 87 WKIEPFRPEDNPFGLCEESSFAVLFPKYREKYLKEIWREVQKELSVHFVAAELDLAEGSM 146
WK F EDNP GL EESSFA LFPKYRE YLKE W VQK L+ H V A LDL EGSM
Sbjct 39 WKEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVKATLDLIEGSM 98
Query 147 TVRTTKKTFDPYIILKARDMIKLLARCVPLQQAKKILEDDMMCDIIKIKGMVRNKEKFVK 206
TV TTKKTFDPYII++ARD+IKLLAR V +QA +IL+DD+ CDIIKI +VRNKE+FVK
Sbjct 99 TVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVK 158
Query 207 RRQRLVGPNGSTLKALELLSCCYILVQGQTVAAMGSPKGLKQVRRVVEDCMQNVHPVYHV 266
RRQRL+GP GSTLKALELL+ CY++VQG TV+A+G GLK+VR+VV D M+N+HP+Y++
Sbjct 159 RRQRLIGPKGSTLKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKVVLDTMKNIHPIYNI 218
Query 267 KELL 270
K L+
Sbjct 219 KTLM 222
> dre:724049 krr1, zgc:136398; KRR1, small subunit (SSU) processome
component, homolog (yeast); K06961 ribosomal RNA assembly
protein
Length=376
Score = 263 bits (671), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 156/203 (76%), Gaps = 4/203 (1%)
Query 72 KYRKDKPWDTDDI----EHWKIEPFRPEDNPFGLCEESSFAVLFPKYREKYLKEIWREVQ 127
K +K K D D+ + WK F DNP GL EESSFA LFPKYRE YLKE W VQ
Sbjct 16 KQKKSKNTDDADLLTVPDDWKEPKFTKADNPKGLLEESSFATLFPKYREAYLKECWPLVQ 75
Query 128 KELSVHFVAAELDLAEGSMTVRTTKKTFDPYIILKARDMIKLLARCVPLQQAKKILEDDM 187
K L+ F+ A LDL EGSMTV TTKKTFDPY I++ARD+IKLLAR VP +QA +IL+DDM
Sbjct 76 KALAELFINATLDLIEGSMTVNTTKKTFDPYSIIRARDLIKLLARSVPFEQAVRILDDDM 135
Query 188 MCDIIKIKGMVRNKEKFVKRRQRLVGPNGSTLKALELLSCCYILVQGQTVAAMGSPKGLK 247
CDIIKI +VRN+E+FVKRRQRL+GP GSTLKALELL+ CY++VQG TV+A+G GLK
Sbjct 136 ACDIIKIGTLVRNRERFVKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSALGPFNGLK 195
Query 248 QVRRVVEDCMQNVHPVYHVKELL 270
+VR+VV D M+N+HP+Y++K L+
Sbjct 196 EVRKVVLDTMKNIHPIYNIKTLM 218
> cel:C05C8.2 hypothetical protein; K06961 ribosomal RNA assembly
protein
Length=370
Score = 253 bits (645), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 151/188 (80%), Gaps = 0/188 (0%)
Query 83 DIEHWKIEPFRPEDNPFGLCEESSFAVLFPKYREKYLKEIWREVQKELSVHFVAAELDLA 142
D E W I F EDNP GL +ESSF+ LFPKYREKY+KE W ++K L HF+ A+LDL
Sbjct 41 DAEWWDINTFSKEDNPNGLLQESSFSSLFPKYREKYIKESWPLIEKALGEHFLKADLDLL 100
Query 143 EGSMTVRTTKKTFDPYIILKARDMIKLLARCVPLQQAKKILEDDMMCDIIKIKGMVRNKE 202
EG+M VRTT+KT+DPYII+KAR++IKLL+R VP +QA ++LED++ C+IIKI MVRNKE
Sbjct 101 EGTMCVRTTRKTWDPYIIMKAREVIKLLSRSVPYEQAIRVLEDEIYCEIIKISSMVRNKE 160
Query 203 KFVKRRQRLVGPNGSTLKALELLSCCYILVQGQTVAAMGSPKGLKQVRRVVEDCMQNVHP 262
+FVKRR RL+G +G+TLKALELL+ CY+ VQG TV A+G GLKQ+ ++V DCM+N+HP
Sbjct 161 RFVKRRARLIGNDGATLKALELLTQCYVCVQGGTVCAVGPLAGLKQINQIVTDCMKNIHP 220
Query 263 VYHVKELL 270
+Y++K ++
Sbjct 221 IYNIKTMM 228
> xla:379129 pno1, MGC53417; partner of NOB1 homolog; K11884 RNA-binding
protein PNO1
Length=236
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query 112 PKYREKYLKEIWREVQKELSVHF-VAAELDLAEGSMTVRTTKKTFDPYIILKARDMIKLL 170
P +R LKE W ++ + H + +L ++ ++T K+T D + KA D ++
Sbjct 65 PSHRYTPLKENWMKIFTPIVEHLQLQVRFNLKSRNVEIKTCKETTDVGALTKAADFVRAF 124
Query 171 ARCVPLQQAKKILE-DDMMCDIIKIKGMVRNKEKFVKRR-QRLVGPNGSTLKALELLSCC 228
++ A ++ DD+ + ++ + K + R R+ G G T +E ++
Sbjct 125 ILGFQVEDALALVRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKT 184
Query 229 YILVQGQTVAAMGSPKGLKQVRRVV 253
I++ + MGS + +K R +
Sbjct 185 RIVLADSKIHIMGSFQNIKMARTAI 209
> pfa:PF14_0661 conserved Plasmodium protein, unknown function;
K11884 RNA-binding protein PNO1
Length=262
Score = 38.1 bits (87), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query 109 VLFPKYREKYLKEIWREVQKELSVHFVAAELDLAEGSMTVRTTKKTFDPYIILKARDMIK 168
+ PK R + + W E+ K + H E+ + + + VRT K T D + K+ D IK
Sbjct 90 ITIPKQRRTSVIKNWLELIKPIVTHL-KLEIRMNKDKIEVRTCKLTEDKNNLQKSSDYIK 148
Query 169 LLARCVPLQQAKKILE-DDMMCDIIKIKGMVRNKEKFVKR-RQRLVGPNGSTLKALELLS 226
L+ + +L +D+ + +I+ + K + R R+ G NGST A+E +
Sbjct 149 AYLLGFTLEDSLALLRIEDLYIESFQIQDVKILKGDHLSRCIGRICGSNGSTKYAIENAT 208
Query 227 CCYILVQGQTVAAMGSPKGLKQVRRVV 253
I++ + +GS +K R +
Sbjct 209 KTRIVIANDKIHILGSFNNIKMARHSI 235
> hsa:56902 PNO1, KHRBP1, RRP20; partner of NOB1 homolog (S. cerevisiae);
K11884 RNA-binding protein PNO1
Length=252
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query 112 PKYREKYLKEIWREVQKELSVHF-VAAELDLAEGSMTVRTTKKTFDPYIILKARDMIKLL 170
P R LKE W ++ + H + +L ++ +RT K+T D + KA D +K
Sbjct 81 PANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAF 140
Query 171 ARCVPLQQAKKILE-DDMMCDIIKIKGMVRNKEKFVKRR-QRLVGPNGSTLKALELLSCC 228
++ A ++ DD+ + +I + K + R R+ G G T +E ++
Sbjct 141 ILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRT 200
Query 229 YILVQGQTVAAMGSPKGLKQVRRVV 253
I++ V +GS + +K R +
Sbjct 201 RIVLADVKVHILGSFQNIKMARTAI 225
> mmu:140482 Zfp358, Zfend; zinc finger protein 358
Length=571
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 0/53 (0%)
Query 25 PSDDEAQTPNPNANPNPNPDANPNSNPDSGGPTADSSSSSSSSSKKGKYRKDK 77
PS D+ P+PN + P+PD P S D PT DSSS + + + K+ K++
Sbjct 511 PSPDQESDPSPNPDLVPSPDPKPKSQTDPCSPTHDSSSPALPTGESPKWVKEE 563
> tgo:TGME49_090680 hypothetical protein
Length=2830
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 0/77 (0%)
Query 15 MPRRKKGPGPPSDDEAQTPNPNANPNPNPDANPNSNPDSGGPTADSSSSSSSSSKKGKYR 74
M RR++G G + E + P+ + A P ++P P D+SSSS +
Sbjct 2613 MRRRRRGSGEDGEREGAAVSSAFAPSQSRGAVPKASPRPPSPAQDASSSSVDPPVSSSFG 2672
Query 75 KDKPWDTDDIEHWKIEP 91
+ W DD + EP
Sbjct 2673 PGRLWGVDDSTELRGEP 2689
> dre:393520 pno1, MGC65782, zgc:65782, zgc:77265; partner of
NOB1 homolog (S. cerevisiae); K11884 RNA-binding protein PNO1
Length=238
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 64/150 (42%), Gaps = 13/150 (8%)
Query 112 PKYREKYLKEIWREV------QKELSVHFVAAELDLAEGSMTVRTTKKTFDPYIILKARD 165
P +R LKE W ++ +L V F +L + ++T K+T D + +A D
Sbjct 67 PSHRYTPLKENWLKIFTPIVENLQLQVRF-----NLKTRQVEIKTCKETQDIGALTRAAD 121
Query 166 MIKLLARCVPLQQAKKILE-DDMMCDIIKIKGMVRNKEKFVKRR-QRLVGPNGSTLKALE 223
+K ++ A ++ D++ + + + K + R R+ G G T +E
Sbjct 122 FVKAFVLGFQVEDALALIRLDELFLETFDVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIE 181
Query 224 LLSCCYILVQGQTVAAMGSPKGLKQVRRVV 253
++ I++ + +GS + +K R +
Sbjct 182 NVTKTRIVLADTKIHILGSFQNIKMARTAI 211
> pfa:PFC0210c circumsporozoite (CS) protein; K13836 circumsporozoite
protein
Length=397
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 0/37 (0%)
Query 16 PRRKKGPGPPSDDEAQTPNPNANPNPNPDANPNSNPD 52
P+ KK P + NPN +PN NP+ +PN+NP+
Sbjct 89 PKHKKLKQPADGNPDPNANPNVDPNANPNVDPNANPN 125
> dre:100319219 si:ch211-262h13.4
Length=635
Score = 30.4 bits (67), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 0/36 (0%)
Query 17 RRKKGPGPPSDDEAQTPNPNANPNPNPDANPNSNPD 52
RR++ G P D Q P+ NP+ PD + NPD
Sbjct 222 RRRRNKGEPDSDPDQEPDTELNPDQEPDPDSEHNPD 257
Lambda K H
0.315 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 10146160788
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40