bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_3470_orf1 Length=105 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_054440 60S ribosomal protein L12, putative ; K02870... 172 3e-43 bbo:BBOV_II003110 18.m06260; 60S ribosomal protein L12 protein... 155 2e-38 tpv:TP04_0282 60S ribosomal protein L12; K02870 large subunit ... 153 1e-37 mmu:668706 Gm11425, OTTMUSG00000000910; predicted gene 11425 152 3e-37 hsa:6136 RPL12; ribosomal protein L12; K02870 large subunit ri... 152 3e-37 mmu:269261 Rpl12, E430018F03, MGC102182, MGC102573; ribosomal ... 152 3e-37 cpv:cgd3_1300 60S ribosomal protein L12 ; K02870 large subunit... 150 1e-36 pfa:PFE0850c 60S ribosomal protein L12, putative; K02870 large... 149 2e-36 xla:379814 rpl12, MGC52768; ribosomal protein L12; K02870 larg... 149 3e-36 cel:JC8.3 rpl-12; Ribosomal Protein, Large subunit family memb... 148 4e-36 mmu:630855 60S ribosomal protein L12-like 147 1e-35 dre:327089 rpl12, MGC103615, fj18a12, wu:fa27c04, wu:fa91d03, ... 145 4e-35 sce:YEL054C RPL12A; Rpl12ap; K02870 large subunit ribosomal pr... 142 4e-34 sce:YDR418W RPL12B; Rpl12bp; K02870 large subunit ribosomal pr... 142 4e-34 ath:AT3G53430 60S ribosomal protein L12 (RPL12B); K02870 large... 139 3e-33 ath:AT5G60670 60S ribosomal protein L12 (RPL12C); K02870 large... 139 3e-33 ath:AT2G37190 60S ribosomal protein L12 (RPL12A); K02870 large... 139 3e-33 mmu:546695 Gm16519; predicted gene, 16519 137 1e-32 mmu:52055 Rab11fip5, 9130206P09Rik, C75969, D6Ertd32e, GAF1, R... 31.2 0.73 cpv:cgd6_4660 hypothetical protein 30.0 2.0 eco:b1413 hrpA, ECK1406, JW5905; predicted ATP-dependent helic... 27.7 9.5 > tgo:TGME49_054440 60S ribosomal protein L12, putative ; K02870 large subunit ribosomal protein L12e Length=165 Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 85/93 (91%), Positives = 90/93 (96%), Gaps = 0/93 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 +YLRQ GGEVGASSVLAPKLGPLGMSPKKVGDDIAKAT+AWKGLKVTV L VQNRQATVE Sbjct 13 IYLRQVGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATVAWKGLKVTVKLAVQNRQATVE 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V+PSASSLIIKELKEPPRDRKKVKNIKH+GNL+ Sbjct 73 VVPSASSLIIKELKEPPRDRKKVKNIKHSGNLS 105 > bbo:BBOV_II003110 18.m06260; 60S ribosomal protein L12 protein; K02870 large subunit ribosomal protein L12e Length=165 Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 76/93 (81%), Positives = 83/93 (89%), Gaps = 0/93 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 VYLRQ GGEV SSVLAPKLGPLGMSPKKVGDDIAK T WKG+KVTV L +QNRQA +E Sbjct 13 VYLRQLGGEVAPSSVLAPKLGPLGMSPKKVGDDIAKETSNWKGIKVTVKLTIQNRQAKIE 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V PSA++L+IKELKEPPRDRKKVKNIKH+GNLT Sbjct 73 VKPSATALLIKELKEPPRDRKKVKNIKHSGNLT 105 > tpv:TP04_0282 60S ribosomal protein L12; K02870 large subunit ribosomal protein L12e Length=165 Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 75/93 (80%), Positives = 82/93 (88%), Gaps = 0/93 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 VYLRQ GGEV SSVLAPKLGPLGMSPKKVGDDIAK T WKG+KVTV L +QNRQA +E Sbjct 13 VYLRQLGGEVAPSSVLAPKLGPLGMSPKKVGDDIAKETANWKGIKVTVKLTIQNRQAKIE 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 + PSA++L+IKELKEP RDRKKVKNIKHNGNLT Sbjct 73 IKPSATALLIKELKEPVRDRKKVKNIKHNGNLT 105 > mmu:668706 Gm11425, OTTMUSG00000000910; predicted gene 11425 Length=165 Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 73/93 (78%), Positives = 84/93 (90%), Gaps = 0/93 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 VYLR TGGEVGA+S LAPK+GPLG+SPKKVGDDIAKAT WKGL++TV L +QNRQA +E Sbjct 13 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V+PSAS+LIIK LKEPPRDRKK KNIKH+GN+T Sbjct 73 VVPSASALIIKALKEPPRDRKKQKNIKHSGNIT 105 > hsa:6136 RPL12; ribosomal protein L12; K02870 large subunit ribosomal protein L12e Length=165 Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 73/93 (78%), Positives = 84/93 (90%), Gaps = 0/93 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 VYLR TGGEVGA+S LAPK+GPLG+SPKKVGDDIAKAT WKGL++TV L +QNRQA +E Sbjct 13 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V+PSAS+LIIK LKEPPRDRKK KNIKH+GN+T Sbjct 73 VVPSASALIIKALKEPPRDRKKQKNIKHSGNIT 105 > mmu:269261 Rpl12, E430018F03, MGC102182, MGC102573; ribosomal protein L12; K02870 large subunit ribosomal protein L12e Length=165 Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 73/93 (78%), Positives = 84/93 (90%), Gaps = 0/93 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 VYLR TGGEVGA+S LAPK+GPLG+SPKKVGDDIAKAT WKGL++TV L +QNRQA +E Sbjct 13 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V+PSAS+LIIK LKEPPRDRKK KNIKH+GN+T Sbjct 73 VVPSASALIIKALKEPPRDRKKQKNIKHSGNIT 105 > cpv:cgd3_1300 60S ribosomal protein L12 ; K02870 large subunit ribosomal protein L12e Length=169 Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 72/93 (77%), Positives = 84/93 (90%), Gaps = 0/93 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 +Y+RQ GGEVGA+SVLAPKLGPLGMSPKKVGDDIAK T AWKG+KV V L VQNRQA ++ Sbjct 17 LYIRQLGGEVGATSVLAPKLGPLGMSPKKVGDDIAKGTAAWKGMKVCVKLTVQNRQAKID 76 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V+P+A+ L+IKELKEP RDRKKVKNIKH+GNL+ Sbjct 77 VVPTATCLLIKELKEPIRDRKKVKNIKHSGNLS 109 > pfa:PFE0850c 60S ribosomal protein L12, putative; K02870 large subunit ribosomal protein L12e Length=165 Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 70/92 (76%), Positives = 83/92 (90%), Gaps = 0/92 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 V++RQ GGEVGASSVL+PKLGPLG+SPKKVGDDIAK T +WKGLK+ V L +QNRQA VE Sbjct 13 VFIRQVGGEVGASSVLSPKLGPLGLSPKKVGDDIAKETQSWKGLKICVKLTIQNRQAKVE 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNL 104 V+P++++LI+KEL E PRDRKKVKNIKHNGNL Sbjct 73 VVPTSAALILKELNEAPRDRKKVKNIKHNGNL 104 > xla:379814 rpl12, MGC52768; ribosomal protein L12; K02870 large subunit ribosomal protein L12e Length=165 Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 72/93 (77%), Positives = 83/93 (89%), Gaps = 0/93 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 V LR TGGEVGA+S LAPK+GPLG+SPKKVGDDIAKAT WKGL++TV L +QNRQA +E Sbjct 13 VCLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V+PSAS+LIIK LKEPPRDRKK KNIKHNGN++ Sbjct 73 VVPSASALIIKALKEPPRDRKKQKNIKHNGNIS 105 > cel:JC8.3 rpl-12; Ribosomal Protein, Large subunit family member (rpl-12) Length=165 Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 70/93 (75%), Positives = 83/93 (89%), Gaps = 0/93 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 VYLR GGEVGA+S LAPK+GPLG+SPKK+G+DIAKAT WKGLKVT L +QNR A ++ Sbjct 13 VYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTCKLTIQNRVAKID 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V+PSA+SLI+KELKEPPRDRKKVKN+KHNG+LT Sbjct 73 VVPSAASLIVKELKEPPRDRKKVKNVKHNGDLT 105 > mmu:630855 60S ribosomal protein L12-like Length=165 Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 71/93 (76%), Positives = 82/93 (88%), Gaps = 0/93 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 VYLR TGG+V A+S LAPK+GPLG+SPKKVGDDIAKAT WKGL++TV L +QNRQA E Sbjct 13 VYLRCTGGKVSATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQTE 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V+PSAS+LIIK LKEPPRDRKK KNIKH+GN+T Sbjct 73 VVPSASALIIKALKEPPRDRKKQKNIKHSGNIT 105 > dre:327089 rpl12, MGC103615, fj18a12, wu:fa27c04, wu:fa91d03, wu:fb14g09, wu:fj18a12, wu:fj26g11, zgc:103615; ribosomal protein L12; K02870 large subunit ribosomal protein L12e Length=165 Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 69/92 (75%), Positives = 83/92 (90%), Gaps = 0/92 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 V++R TGGEVGA+S LAPK+GPLG+SPKKVGDDIAKAT WKG ++TV L +QNRQA +E Sbjct 13 VFMRCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATGDWKGPRITVKLTIQNRQAAIE 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNL 104 V+PSAS+LIIK LKEPPRDRKKVKNIKH+G++ Sbjct 73 VVPSASALIIKALKEPPRDRKKVKNIKHSGSV 104 > sce:YEL054C RPL12A; Rpl12ap; K02870 large subunit ribosomal protein L12e Length=165 Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 67/92 (72%), Positives = 80/92 (86%), Gaps = 0/92 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 +YLR GGEVGAS+ LAPK+GPLG+SPKKVG+DIAKAT +KG+KVTV LK+QNRQA Sbjct 13 LYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKATKEFKGIKVTVQLKIQNRQAAAS 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNL 104 V+PSASSL+I LKEPPRDRKK KN+KH+GN+ Sbjct 73 VVPSASSLVITALKEPPRDRKKDKNVKHSGNI 104 > sce:YDR418W RPL12B; Rpl12bp; K02870 large subunit ribosomal protein L12e Length=165 Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 67/92 (72%), Positives = 80/92 (86%), Gaps = 0/92 (0%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 +YLR GGEVGAS+ LAPK+GPLG+SPKKVG+DIAKAT +KG+KVTV LK+QNRQA Sbjct 13 LYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKATKEFKGIKVTVQLKIQNRQAAAS 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNL 104 V+PSASSL+I LKEPPRDRKK KN+KH+GN+ Sbjct 73 VVPSASSLVITALKEPPRDRKKDKNVKHSGNI 104 > ath:AT3G53430 60S ribosomal protein L12 (RPL12B); K02870 large subunit ribosomal protein L12e Length=166 Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 68/96 (70%), Positives = 83/96 (86%), Gaps = 1/96 (1%) Query 11 LGVYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATM-AWKGLKVTVCLKVQNRQA 69 + VY+R TGGEVGA+S LAPK+GPLG++PKK+G+DIAK T WKGL+VTV L VQNRQA Sbjct 11 VDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQA 70 Query 70 TVEVMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V V+PSA++L+IK LKEP RDRKKVKNIKHNGN++ Sbjct 71 KVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNIS 106 > ath:AT5G60670 60S ribosomal protein L12 (RPL12C); K02870 large subunit ribosomal protein L12e Length=166 Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 69/103 (66%), Positives = 85/103 (82%), Gaps = 1/103 (0%) Query 4 RLRRFACLGVYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATM-AWKGLKVTVCL 62 +L + VY+R TGGEVGA+S LAPK+GPLG++PKK+G+DIAK T WKGL+VTV L Sbjct 4 KLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKL 63 Query 63 KVQNRQATVEVMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 VQNRQA V V+PSA++L+IK LKEP RDRKKVKNIKHNGN++ Sbjct 64 TVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNIS 106 > ath:AT2G37190 60S ribosomal protein L12 (RPL12A); K02870 large subunit ribosomal protein L12e Length=166 Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 68/96 (70%), Positives = 83/96 (86%), Gaps = 1/96 (1%) Query 11 LGVYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATM-AWKGLKVTVCLKVQNRQA 69 + VY+R TGGEVGA+S LAPK+GPLG++PKK+G+DIAK T WKGL+VTV L VQNRQA Sbjct 11 VDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQA 70 Query 70 TVEVMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V V+PSA++L+IK LKEP RDRKKVKNIKHNGN++ Sbjct 71 KVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNIS 106 > mmu:546695 Gm16519; predicted gene, 16519 Length=163 Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 68/93 (73%), Positives = 78/93 (83%), Gaps = 2/93 (2%) Query 13 VYLRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE 72 VYLR TGGEVGA+S LAPK+ PL +SPKKVGDDIAKAT WKGL++TV L +QNRQ +E Sbjct 13 VYLRCTGGEVGATSALAPKIRPLDLSPKKVGDDIAKATGDWKGLRITVKLSIQNRQTQIE 72 Query 73 VMPSASSLIIKELKEPPRDRKKVKNIKHNGNLT 105 V+PSA LIIK LKEPPRDR+K KNIKH+GN T Sbjct 73 VVPSA--LIIKALKEPPRDREKQKNIKHSGNFT 103 > mmu:52055 Rab11fip5, 9130206P09Rik, C75969, D6Ertd32e, GAF1, RIP11, mKIAA0857; RAB11 family interacting protein 5 (class I); K12484 Rab11 family-interacting protein 1/2/5 Length=1318 Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 9/72 (12%) Query 30 PKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVEVMPSASSLIIKELKEPP 89 P+L P G SP G+D A AT A V L ++ R A E PS S +K L P Sbjct 1145 PELSPTGGSPTSYGEDHAAATPA----SPLVLLPLETRPAE-EPQPSGSPHPVKPLTAAP 1199 Query 90 ----RDRKKVKN 97 DRK+ + Sbjct 1200 VEASPDRKQPRT 1211 > cpv:cgd6_4660 hypothetical protein Length=526 Score = 30.0 bits (66), Expect = 2.0, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Query 25 SSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVE----VMPSASSL 80 SSVL + P V K T W G ++ L + + V+ V+ A Sbjct 323 SSVLPNIFPSISHRPLPVNVCYIKLTFNWPGARLVRDLWALDCELLVDWGDGVLTQARRF 382 Query 81 IIKELKEPPRDRKKVKNIKHNG 102 +KEL EPP +++NI G Sbjct 383 TLKELGEPPESDNEMRNIYSQG 404 > eco:b1413 hrpA, ECK1406, JW5905; predicted ATP-dependent helicase; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] Length=1300 Score = 27.7 bits (60), Expect = 9.5, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 9/86 (10%) Query 15 LRQTGGEVGASSVLAPKLGPLGMSPKKVGDDIAKATMAWKGLKVTVCLKVQNRQATVEVM 74 L + G A KL PLG ++ D A M L+ Q E M Sbjct 469 LEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMV---------LEAQKHGCVREAM 519 Query 75 PSASSLIIKELKEPPRDRKKVKNIKH 100 S+L I++ +E P D+++ + KH Sbjct 520 IITSALSIQDPRERPMDKQQASDEKH 545 Lambda K H 0.316 0.133 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2017521068 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40