bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_3498_orf1 Length=76 Score E Sequences producing significant alignments: (Bits) Value cpv:cgd7_220 GTP-binding nuclear protein ran/tc4 ; K07936 GTP-... 133 1e-31 tgo:TGME49_048340 GTP-binding nuclear protein RAN/TC4, putativ... 131 5e-31 pfa:PF11_0183 ran; GTP-binding nuclear protein ran/tc4; K07936... 124 1e-28 tpv:TP01_0757 GTP-binding nuclear protein ran; K07936 GTP-bind... 122 2e-28 xla:379874 ran-1, MGC53579, ran; RAN, member RAS oncogene fami... 122 3e-28 xla:100189578 ran, ara24, gsp1, ran-1, tc4, xran; RAN, member ... 122 3e-28 bbo:BBOV_IV010920 23.m06098; GTP-binding nuclear protein Ran; ... 122 4e-28 mmu:19384 Ran; RAN, member RAS oncogene family; K07936 GTP-bin... 122 4e-28 mmu:100045999 GTP-binding nuclear protein Ran-like; K07936 GTP... 122 4e-28 hsa:5901 RAN, ARA24, Gsp1, TC4; RAN, member RAS oncogene famil... 122 4e-28 sce:YOR185C GSP2, CNR2; GTP binding protein (mammalian Ranp ho... 119 3e-27 sce:YLR293C GSP1, CNR1, CST17; Gsp1p; K07936 GTP-binding nucle... 118 4e-27 cel:K01G5.4 ran-1; associated with RAN (nuclear import/export)... 118 4e-27 dre:30572 ran, fc16b04, wu:fc16b04; ras-related nuclear protei... 117 7e-27 mmu:19428 Rasl2-9-ps, M2, Ran, Ran/M2, Rasl2-9; RAS-like, fami... 117 1e-26 mmu:75471 1700009N14Rik, AI429145; RIKEN cDNA 1700009N14 gene;... 115 4e-26 ath:AT5G55190 RAN3; RAN3 (RAN GTPASE 3); GTP binding / GTPase/... 112 2e-25 ath:AT5G20010 RAN-1; RAN-1; GTP binding / GTPase/ protein bind... 112 3e-25 ath:AT5G20020 RAN2; RAN2; GTP binding / GTPase/ protein bindin... 112 3e-25 ath:AT5G55080 AtRAN4; AtRAN4 (Ras-related nuclear protein 4); ... 97.1 1e-20 sce:YOR089C VPS21, VPS12, VPT12, YPT21, YPT51; GTPase required... 53.1 2e-07 dre:494576 zgc:110195; si:dkey-13a21.4 53.1 2e-07 dre:450074 rab34, zgc:101620; RAB34, member RAS oncogene famil... 52.0 5e-07 sce:YNL093W YPT53; GTPase, similar to Ypt51p and Ypt52p and to... 51.6 6e-07 dre:780839 rab36, zgc:158229; RAB36, member RAS oncogene famil... 51.2 8e-07 hsa:9609 RAB36; RAB36, member RAS oncogene family; K07922 Ras-... 50.8 1e-06 xla:100127302 rab36; RAB36, member RAS oncogene family; K07922... 50.4 1e-06 tgo:TGME49_049170 ras family domain-containing protein (EC:3.1... 50.1 2e-06 mmu:68708 Rabl2, 1110031N17Rik, AW549303, Rabl2a; RAB, member ... 50.1 2e-06 mmu:76877 Rab36, 6330593L16Rik, AW047545; RAB36, member RAS on... 50.1 2e-06 pfa:PF08_0110 rab18; PfRab18, GTPase; K07910 Ras-related prote... 50.1 2e-06 hsa:11159 RABL2A, FLJ78724, MGC117180; RAB, member of RAS onco... 49.7 2e-06 pfa:PF11_0461 rab6; PfRab6, GTPase; K07976 Rab family, other 49.7 3e-06 hsa:11158 RABL2B, FLJ93981, FLJ98216; RAB, member of RAS oncog... 49.3 3e-06 tgo:TGME49_058130 Ras family domain-containing protein (EC:3.1... 48.9 4e-06 mmu:19335 Rab23, AW545388, opb, opb2; RAB23, member RAS oncoge... 48.9 4e-06 xla:446683 rabl2b, MGC83481; RAB, member of RAS oncogene famil... 48.9 4e-06 ath:AT5G03530 RABC2A; RABC2A (RAB GTPASE HOMOLOG C2A); GTP bin... 48.9 4e-06 xla:444746 MGC84778 protein 48.5 5e-06 hsa:51715 RAB23, DKFZp781H0695, HSPC137, MGC8900; RAB23, membe... 48.5 5e-06 cel:Y92C3B.3 rab-18; RAB family member (rab-18); K07910 Ras-re... 48.5 5e-06 bbo:BBOV_III000780 17.m07097; Rab1b 48.5 5e-06 tgo:TGME49_113190 Ras family domain-containing protein (EC:3.1... 48.5 5e-06 mmu:19331 Rab19; RAB19, member RAS oncogene family 48.1 7e-06 dre:100007678 Ras-related protein RAB34-like 48.1 7e-06 dre:561568 rabl2, si:dkeyp-1h4.2; RAB, member of RAS oncogene ... 48.1 7e-06 mmu:19376 Rab34, AI326479, Rah, Rah1; RAB34, member of RAS onc... 48.1 7e-06 ath:AT1G43890 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GT... 48.1 7e-06 dre:100333836 RAB26, member RAS oncogene family-like 48.1 8e-06 dre:553778 rab23, MGC110261, zgc:110261; RAB23, member RAS onc... 47.8 8e-06 > cpv:cgd7_220 GTP-binding nuclear protein ran/tc4 ; K07936 GTP-binding nuclear protein Ran Length=212 Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 57/66 (86%), Positives = 65/66 (98%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKYIPT+GVEV PL+F+T+FGP++FNVWDTAGQEKFGGLRDGYYIKGQCAI+MFDV Sbjct 30 GEFEKKYIPTIGVEVHPLKFNTDFGPLIFNVWDTAGQEKFGGLRDGYYIKGQCAIIMFDV 89 Query 71 TSRVTY 76 TSR+TY Sbjct 90 TSRITY 95 > tgo:TGME49_048340 GTP-binding nuclear protein RAN/TC4, putative (EC:3.1.4.12); K07936 GTP-binding nuclear protein Ran Length=216 Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 59/67 (88%), Positives = 62/67 (92%), Gaps = 0/67 (0%) Query 10 AGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFD 69 GEFEKKYIPTLGVEV PL+F TNFG I FNVWDTAGQEKFGGLRDGYYIKGQCAIMMFD Sbjct 33 TGEFEKKYIPTLGVEVHPLKFQTNFGMITFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFD 92 Query 70 VTSRVTY 76 VT+R+TY Sbjct 93 VTARITY 99 > pfa:PF11_0183 ran; GTP-binding nuclear protein ran/tc4; K07936 GTP-binding nuclear protein Ran Length=214 Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 55/67 (82%), Positives = 59/67 (88%), Gaps = 0/67 (0%) Query 10 AGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFD 69 GEFEKKYIPTLGVEV PL+F TNFG FNVWDTAGQEKFGGLRDGYYIK CAI+MFD Sbjct 31 TGEFEKKYIPTLGVEVHPLKFQTNFGKTQFNVWDTAGQEKFGGLRDGYYIKSDCAIIMFD 90 Query 70 VTSRVTY 76 V+SR+TY Sbjct 91 VSSRITY 97 > tpv:TP01_0757 GTP-binding nuclear protein ran; K07936 GTP-binding nuclear protein Ran Length=211 Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 54/66 (81%), Positives = 60/66 (90%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKYIPTLGVEV PL+F TN G + FN WDTAGQEK+GGLRDGYYIKG+CAI+MFDV Sbjct 30 GEFEKKYIPTLGVEVHPLKFRTNCGTVQFNAWDTAGQEKYGGLRDGYYIKGECAIIMFDV 89 Query 71 TSRVTY 76 TSR+TY Sbjct 90 TSRITY 95 > xla:379874 ran-1, MGC53579, ran; RAN, member RAS oncogene family; K07936 GTP-binding nuclear protein Ran Length=216 Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 56/66 (84%), Positives = 59/66 (89%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKY+ TLGVEV PL F TN GPI FNVWDTAGQEKFGGLRDGYYI+ QCAI+MFDV Sbjct 33 GEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDV 92 Query 71 TSRVTY 76 TSRVTY Sbjct 93 TSRVTY 98 > xla:100189578 ran, ara24, gsp1, ran-1, tc4, xran; RAN, member RAS oncogene family; K07936 GTP-binding nuclear protein Ran Length=216 Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 56/66 (84%), Positives = 59/66 (89%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKY+ TLGVEV PL F TN GPI FNVWDTAGQEKFGGLRDGYYI+ QCAI+MFDV Sbjct 33 GEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDV 92 Query 71 TSRVTY 76 TSRVTY Sbjct 93 TSRVTY 98 > bbo:BBOV_IV010920 23.m06098; GTP-binding nuclear protein Ran; K07936 GTP-binding nuclear protein Ran Length=211 Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 55/66 (83%), Positives = 60/66 (90%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKYIPTLGVEV PL+F TN G I FN WDTAGQEK+GGLRDGYYIKG+CAI+MFDV Sbjct 30 GEFEKKYIPTLGVEVHPLKFRTNCGGIQFNAWDTAGQEKYGGLRDGYYIKGECAIIMFDV 89 Query 71 TSRVTY 76 TSR+TY Sbjct 90 TSRITY 95 > mmu:19384 Ran; RAN, member RAS oncogene family; K07936 GTP-binding nuclear protein Ran Length=216 Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 56/66 (84%), Positives = 59/66 (89%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKY+ TLGVEV PL F TN GPI FNVWDTAGQEKFGGLRDGYYI+ QCAI+MFDV Sbjct 33 GEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDV 92 Query 71 TSRVTY 76 TSRVTY Sbjct 93 TSRVTY 98 > mmu:100045999 GTP-binding nuclear protein Ran-like; K07936 GTP-binding nuclear protein Ran Length=216 Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 56/66 (84%), Positives = 59/66 (89%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKY+ TLGVEV PL F TN GPI FNVWDTAGQEKFGGLRDGYYI+ QCAI+MFDV Sbjct 33 GEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDV 92 Query 71 TSRVTY 76 TSRVTY Sbjct 93 TSRVTY 98 > hsa:5901 RAN, ARA24, Gsp1, TC4; RAN, member RAS oncogene family; K07936 GTP-binding nuclear protein Ran Length=216 Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 56/66 (84%), Positives = 59/66 (89%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKY+ TLGVEV PL F TN GPI FNVWDTAGQEKFGGLRDGYYI+ QCAI+MFDV Sbjct 33 GEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDV 92 Query 71 TSRVTY 76 TSRVTY Sbjct 93 TSRVTY 98 > sce:YOR185C GSP2, CNR2; GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); Gsp1p homolog that is not required for viability; K07936 GTP-binding nuclear protein Ran Length=220 Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 54/66 (81%), Positives = 58/66 (87%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKYI T+GVEV PL F TNFG I F+VWDTAGQEKFGGLRDGYYI QCAI+MFDV Sbjct 36 GEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDV 95 Query 71 TSRVTY 76 TSR+TY Sbjct 96 TSRITY 101 > sce:YLR293C GSP1, CNR1, CST17; Gsp1p; K07936 GTP-binding nuclear protein Ran Length=219 Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 54/66 (81%), Positives = 58/66 (87%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKYI T+GVEV PL F TNFG I F+VWDTAGQEKFGGLRDGYYI QCAI+MFDV Sbjct 35 GEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDV 94 Query 71 TSRVTY 76 TSR+TY Sbjct 95 TSRITY 100 > cel:K01G5.4 ran-1; associated with RAN (nuclear import/export) function family member (ran-1); K07936 GTP-binding nuclear protein Ran Length=215 Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 55/66 (83%), Positives = 59/66 (89%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKY+ TLGVEV PL F TN G I FNVWDTAGQEKFGGLRDGYYI+GQCAI+MFDV Sbjct 32 GEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDV 91 Query 71 TSRVTY 76 T+RVTY Sbjct 92 TARVTY 97 > dre:30572 ran, fc16b04, wu:fc16b04; ras-related nuclear protein; K07936 GTP-binding nuclear protein Ran Length=215 Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 54/66 (81%), Positives = 58/66 (87%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKY+ TLGVEV PL F TN G I +NVWDTAGQEKFGGLRDGYYI+ QCAI+MFDV Sbjct 32 GEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDV 91 Query 71 TSRVTY 76 TSRVTY Sbjct 92 TSRVTY 97 > mmu:19428 Rasl2-9-ps, M2, Ran, Ran/M2, Rasl2-9; RAS-like, family 2, locus 9, pseudogene; K07936 GTP-binding nuclear protein Ran Length=216 Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 54/66 (81%), Positives = 58/66 (87%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEK+Y+ TLGVEV L F TN GPI FNVWDTAGQEKFGGLRDGYYI+ QCAI+MFDV Sbjct 33 GEFEKEYVATLGVEVHTLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDV 92 Query 71 TSRVTY 76 TSRVTY Sbjct 93 TSRVTY 98 > mmu:75471 1700009N14Rik, AI429145; RIKEN cDNA 1700009N14 gene; K07936 GTP-binding nuclear protein Ran Length=216 Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 53/66 (80%), Positives = 58/66 (87%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKY+ TLGVEV PL F T+ GPI FNVWDTAGQEKFGGLRDGYYI+ Q AI+MFDV Sbjct 33 GEFEKKYVATLGVEVHPLMFHTSRGPIKFNVWDTAGQEKFGGLRDGYYIQAQGAIIMFDV 92 Query 71 TSRVTY 76 TSR+TY Sbjct 93 TSRITY 98 > ath:AT5G55190 RAN3; RAN3 (RAN GTPASE 3); GTP binding / GTPase/ protein binding; K07936 GTP-binding nuclear protein Ran Length=221 Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 52/66 (78%), Positives = 56/66 (84%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKY PT+GVEV PL F TN G I F WDTAGQEKFGGLRDGYYI GQCAI+MFDV Sbjct 36 GEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDV 95 Query 71 TSRVTY 76 T+R+TY Sbjct 96 TARLTY 101 > ath:AT5G20010 RAN-1; RAN-1; GTP binding / GTPase/ protein binding; K07936 GTP-binding nuclear protein Ran Length=221 Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 52/66 (78%), Positives = 56/66 (84%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKY PT+GVEV PL F TN G I F WDTAGQEKFGGLRDGYYI GQCAI+MFDV Sbjct 36 GEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDV 95 Query 71 TSRVTY 76 T+R+TY Sbjct 96 TARLTY 101 > ath:AT5G20020 RAN2; RAN2; GTP binding / GTPase/ protein binding; K07936 GTP-binding nuclear protein Ran Length=221 Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 52/66 (78%), Positives = 56/66 (84%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 GEFEKKY PT+GVEV PL F TN G I F WDTAGQEKFGGLRDGYYI GQCAI+MFDV Sbjct 36 GEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDV 95 Query 71 TSRVTY 76 T+R+TY Sbjct 96 TARLTY 101 > ath:AT5G55080 AtRAN4; AtRAN4 (Ras-related nuclear protein 4); GTP binding / GTPase/ protein binding; K07936 GTP-binding nuclear protein Ran Length=222 Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 44/67 (65%), Positives = 50/67 (74%), Gaps = 0/67 (0%) Query 10 AGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFD 69 GEFE PTLGV++ PL F TN G I F WDTAGQEK+ GL+D YYI GQCAI+MFD Sbjct 35 TGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFD 94 Query 70 VTSRVTY 76 VT+R TY Sbjct 95 VTARHTY 101 > sce:YOR089C VPS21, VPS12, VPT12, YPT21, YPT51; GTPase required for transport during endocytosis and for correct sorting of vacuolar hydrolases; localized in endocytic intermediates; detected in mitochondria; geranylgeranylation required for membrane association; mammalian Rab5 homolog; K07976 Rab family, other Length=210 Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 0/62 (0%) Query 10 AGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFD 69 + +F + PT+G R + N + F +WDTAGQE+F L YY Q A++++D Sbjct 29 SNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYD 88 Query 70 VT 71 VT Sbjct 89 VT 90 > dre:494576 zgc:110195; si:dkey-13a21.4 Length=205 Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 0/64 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 72 F Y T+GV+ + + P++ +WDTAG E+F L Y C +++FDVTS Sbjct 33 FTNLYRATIGVDFLTKEITVDRRPVILQIWDTAGTERFHSLGSSLYRGAHCCLLVFDVTS 92 Query 73 RVTY 76 V++ Sbjct 93 SVSF 96 > dre:450074 rab34, zgc:101620; RAB34, member RAS oncogene family; K07921 Ras-related protein Rab-34 Length=260 Score = 52.0 bits (123), Expect = 5e-07, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 0/59 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVT 71 F+K Y T+GV+ RF P +WDTAGQE+F + YY Q I++FD+T Sbjct 78 FDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAVIIVFDLT 136 > sce:YNL093W YPT53; GTPase, similar to Ypt51p and Ypt52p and to mammalian rab5; required for vacuolar protein sorting and endocytosis; K07976 Rab family, other Length=220 Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 0/67 (0%) Query 10 AGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFD 69 + +F++ PT+G R + + I F +WDTAGQE+F L YY Q A+++FD Sbjct 34 SDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFD 93 Query 70 VTSRVTY 76 VT+ ++ Sbjct 94 VTNEGSF 100 > dre:780839 rab36, zgc:158229; RAB36, member RAS oncogene family; K07922 Ras-related protein Rab-36 Length=262 Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 FE+ Y T+GV+ RF + P +WDTAGQEKF + YY Q I +FD+ Sbjct 80 FERDYKATIGVDFEIERFEMSGLPFSLQIWDTAGQEKFKCIASAYYRGAQVIITVFDM 137 > hsa:9609 RAB36; RAB36, member RAS oncogene family; K07922 Ras-related protein Rab-36 Length=333 Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 0/59 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVT 71 F++ Y T+GV+ RF P +WDTAGQEKF + YY Q I FD+T Sbjct 148 FDRDYKATIGVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLT 206 > xla:100127302 rab36; RAB36, member RAS oncogene family; K07922 Ras-related protein Rab-36 Length=242 Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 0/58 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 F++ Y T+GV+ RF P F +WDTAGQEKF + YY Q I FD+ Sbjct 57 FDRDYKATIGVDFEIERFEILGIPFNFQIWDTAGQEKFKCIASAYYRGAQVIITAFDL 114 > tgo:TGME49_049170 ras family domain-containing protein (EC:3.1.4.12) Length=771 Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 0/65 (0%) Query 12 EFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVT 71 ++ ++ T+GV+ + + +WDTAGQE+F G+ YY C I++FD+T Sbjct 517 QYSAFHVSTIGVDFKSVLTMVKGKVCTLQLWDTAGQERFSGVTGNYYRNADCFILVFDMT 576 Query 72 SRVTY 76 R ++ Sbjct 577 RRSSF 581 > mmu:68708 Rabl2, 1110031N17Rik, AW549303, Rabl2a; RAB, member of RAS oncogene family-like 2 Length=223 Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 0/64 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 72 F+ + + T + + + + I+ + WDTAGQE+F + YY K IM+FDV Sbjct 46 FQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQR 105 Query 73 RVTY 76 ++TY Sbjct 106 KITY 109 > mmu:76877 Rab36, 6330593L16Rik, AW047545; RAB36, member RAS oncogene family; K07922 Ras-related protein Rab-36 Length=267 Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 0/59 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVT 71 F+ Y T+GV+ RF P +WDTAGQEKF + YY Q I FD+T Sbjct 82 FDHDYKATIGVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLT 140 > pfa:PF08_0110 rab18; PfRab18, GTPase; K07910 Ras-related protein Rab-18 Length=201 Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 0/66 (0%) Query 11 GEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 +FE+K + T+G++ + + I +WDTAGQE+F L YY I+++D Sbjct 33 NQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIWDTAGQERFRTLTSAYYRNAHAIILVYDC 92 Query 71 TSRVTY 76 T R ++ Sbjct 93 TVRESF 98 > hsa:11159 RABL2A, FLJ78724, MGC117180; RAB, member of RAS oncogene family-like 2A; K07931 Rab-like protein 2A Length=228 Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 0/64 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 72 F+ + + T + + + + I+ + WDTAGQE+F + YY K IM+FD+ Sbjct 46 FQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQR 105 Query 73 RVTY 76 +VTY Sbjct 106 KVTY 109 > pfa:PF11_0461 rab6; PfRab6, GTPase; K07976 Rab family, other Length=207 Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 0/64 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 72 F+ Y T+G++ + GP+ +WDTAGQE+F L Y AI+++D+T+ Sbjct 36 FDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQERFRSLIPSYIRDSAAAIVVYDITN 95 Query 73 RVTY 76 R ++ Sbjct 96 RQSF 99 > hsa:11158 RABL2B, FLJ93981, FLJ98216; RAB, member of RAS oncogene family-like 2B; K07932 Rab-like protein 2B Length=229 Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats. Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 0/40 (0%) Query 37 IVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRVTY 76 I+ + WDTAGQE+F + YY K IM+FDV +VTY Sbjct 70 ILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTY 109 > tgo:TGME49_058130 Ras family domain-containing protein (EC:3.1.4.12) Length=238 Score = 48.9 bits (115), Expect = 4e-06, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 0/64 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 72 F + YI T+GV+ R + + + +WDTAGQE+F + YY ++++DVT Sbjct 59 FTESYITTIGVDFRFRTINVDNEIVKLQIWDTAGQERFRTITSAYYRGADGIVLVYDVTD 118 Query 73 RVTY 76 R ++ Sbjct 119 RESF 122 > mmu:19335 Rab23, AW545388, opb, opb2; RAB23, member RAS oncogene family; K06234 Ras-related protein Rab-23 Length=237 Score = 48.9 bits (115), Expect = 4e-06, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 0/74 (0%) Query 3 SRVEAVRAGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQ 62 S ++ G F K Y T+GV+ + N + +WDTAGQE+F + YY Q Sbjct 24 SMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQ 83 Query 63 CAIMMFDVTSRVTY 76 +++F T R ++ Sbjct 84 ACVLVFSTTDRESF 97 > xla:446683 rabl2b, MGC83481; RAB, member of RAS oncogene family-like 2B Length=225 Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 0/64 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 72 F + + T + + + ++ + WDTAGQE+F + YY K IM+FDV Sbjct 46 FRPQQLSTFALTLYKYSTCIDGNTVLVDFWDTAGQERFHSMHASYYHKAHACIMVFDVQR 105 Query 73 RVTY 76 ++TY Sbjct 106 KITY 109 > ath:AT5G03530 RABC2A; RABC2A (RAB GTPASE HOMOLOG C2A); GTP binding / GTP-dependent protein binding / myosin XI tail binding; K07976 Rab family, other Length=210 Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 0/58 (0%) Query 19 PTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRVTY 76 PT+GV+ + + + + +WDTAGQE+F L YY Q I+++DVT R T+ Sbjct 43 PTIGVDFKIKQLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF 100 > xla:444746 MGC84778 protein Length=225 Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 0/64 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 72 F + + T + + + ++ + WDTAGQE+F + YY K IM+FDV Sbjct 46 FRPQQLSTFALTLYKYSTCIDGNTVLVDFWDTAGQERFHSMHASYYHKAHACIMVFDVQR 105 Query 73 RVTY 76 ++TY Sbjct 106 KITY 109 > hsa:51715 RAB23, DKFZp781H0695, HSPC137, MGC8900; RAB23, member RAS oncogene family; K06234 Ras-related protein Rab-23 Length=237 Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 0/74 (0%) Query 3 SRVEAVRAGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQ 62 S ++ G F K Y T+GV+ + N + +WDTAGQE+F + YY Q Sbjct 24 SMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQ 83 Query 63 CAIMMFDVTSRVTY 76 +++F T R ++ Sbjct 84 ACVLVFSTTDRESF 97 > cel:Y92C3B.3 rab-18; RAB family member (rab-18); K07910 Ras-related protein Rab-18 Length=203 Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 0/64 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 72 F+ + T+GV+ R + + + +WDTAGQE+F L YY Q I ++DVTS Sbjct 36 FDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTS 95 Query 73 RVTY 76 R ++ Sbjct 96 RSSF 99 > bbo:BBOV_III000780 17.m07097; Rab1b Length=221 Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 0/64 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 72 + + Y+ T+GV+ + + I +WDTAGQE+F + YY I ++DVTS Sbjct 32 YSESYMSTIGVDFKIKTVKIDNVTIKLQIWDTAGQERFRTITSTYYRGAHGIITVYDVTS 91 Query 73 RVTY 76 RV++ Sbjct 92 RVSF 95 > tgo:TGME49_113190 Ras family domain-containing protein (EC:3.1.4.12); K07910 Ras-related protein Rab-18 Length=212 Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 0/64 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 72 F +K + T+GV+ + + + +WDTAGQE+F L YY Q IM++DV++ Sbjct 39 FNEKQLSTIGVDFKVKAMTVGDMRLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSN 98 Query 73 RVTY 76 R ++ Sbjct 99 RQSF 102 > mmu:19331 Rab19; RAB19, member RAS oncogene family Length=217 Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 0/72 (0%) Query 5 VEAVRAGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCA 64 V+ ++G + + T+GV+ + + VWDTAGQE+F + YY A Sbjct 34 VQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAA 93 Query 65 IMMFDVTSRVTY 76 I+ +D+T R T+ Sbjct 94 IIAYDLTRRSTF 105 > dre:100007678 Ras-related protein RAB34-like Length=215 Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 0/60 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTS 72 F++ Y T+GV+ RF P +WDTAGQE+F + YY Q I++FD+++ Sbjct 36 FDRTYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFRCIASTYYRGAQAIIVVFDLSN 95 > dre:561568 rabl2, si:dkeyp-1h4.2; RAB, member of RAS oncogene family-like 2 Length=219 Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 12/63 (19%) Query 26 RPLRFST------------NFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSR 73 RP + ST N I+ + WDTAGQE+F + YY K +M+FDV + Sbjct 45 RPQQLSTYALTLYKYTTTINGQTILVDFWDTAGQERFRSMHPSYYHKSHACVMVFDVQRK 104 Query 74 VTY 76 +TY Sbjct 105 ITY 107 > mmu:19376 Rab34, AI326479, Rah, Rah1; RAB34, member of RAS oncogene family; K07921 Ras-related protein Rab-34 Length=259 Score = 48.1 bits (113), Expect = 7e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 13 FEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDV 70 F+K Y T+GV+ RF P +WDTAGQE+F + YY Q I++F++ Sbjct 77 FDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNL 134 > ath:AT1G43890 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding; K07910 Ras-related protein Rab-18 Length=212 Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 0/58 (0%) Query 19 PTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRVTY 76 PT+GV+ + + + +WDTAGQE+F L YY Q IM++DVT R T+ Sbjct 43 PTIGVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTF 100 > dre:100333836 RAB26, member RAS oncogene family-like Length=148 Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 17 YIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRVTY 76 +I T+G++ R S + + +WDTAGQE+F + YY ++++DVT++ ++ Sbjct 85 FISTVGIDFRNKVLSIDSMRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKSSF 144 > dre:553778 rab23, MGC110261, zgc:110261; RAB23, member RAS oncogene family; K06234 Ras-related protein Rab-23 Length=237 Score = 47.8 bits (112), Expect = 8e-06, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 0/74 (0%) Query 3 SRVEAVRAGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQ 62 S ++ G F K Y T+GV+ + N + +WDTAGQE+F + YY Q Sbjct 24 SMIQRYCKGIFTKDYKKTIGVDFLERQIIVNGEDVRLMLWDTAGQEEFDAITKAYYRGAQ 83 Query 63 CAIMMFDVTSRVTY 76 +++F T R ++ Sbjct 84 ACVLVFSTTDRESF 97 Lambda K H 0.325 0.142 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2076916240 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40