bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_3759_orf1 Length=248 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_094360 ubiquitin carboxyl-terminal hydrolase, putat... 297 2e-80 bbo:BBOV_II005180 18.m06428; u4/u6.u5 tri-snRNP-associated 65 ... 232 1e-60 ath:AT4G22350 ubiquitin carboxyl-terminal hydrolase family pro... 197 4e-50 ath:AT4G22285 ubiquitin thiolesterase/ zinc ion binding 195 1e-49 ath:AT4G22410 ubiquitin carboxyl-terminal hydrolase family pro... 193 4e-49 dre:790924 usp39, wu:fb54d10, wu:fb79f05, zgc:158428; ubiquiti... 164 3e-40 pfa:PF13_0096 Ubiquitin Carboxyl-terminal Hydrolase-like zinc ... 160 4e-39 mmu:28035 Usp39, AA408960, AI894154, CGI-21, D6Wsu157e, SAD1; ... 158 2e-38 hsa:10713 USP39, HSPC332, MGC75069, SAD1, SNRNP65; ubiquitin s... 157 3e-38 tpv:TP02_0821 ubiquitin carboxyl-terminal hydrolase; K12847 U4... 155 9e-38 cel:F09D1.1 hypothetical protein; K12847 U4/U6.U5 tri-snRNP-as... 139 8e-33 sce:YFR005C SAD1; Conserved zinc-finger domain protein involve... 64.7 3e-10 cpv:cgd5_2350 SnRNP assembly defective 1 like ubiquitin C-term... 57.4 5e-08 tgo:TGME49_063420 ubiquitin carboxyl-terminal hydrolase, putat... 48.1 3e-05 mmu:14479 Usp15, 4921514G19Rik, AI327321, E430033I05Rik, Gcap1... 46.6 9e-05 hsa:9958 USP15, KIAA0529, MGC131982, MGC149838, MGC74854, UNPH... 46.2 1e-04 cel:H34C03.2 hypothetical protein; K11835 ubiquitin carboxyl-t... 45.1 2e-04 dre:100329394 usp46, si:ch73-16a12.1; ubiquitin specific pepti... 45.1 3e-04 hsa:7375 USP4, MGC149848, MGC149849, UNP, Unph; ubiquitin spec... 43.9 5e-04 mmu:216835 Usp43, 9130017K11Rik, B930051C24, C630032K07Rik; ub... 43.9 6e-04 hsa:124739 USP43, FLJ30626; ubiquitin specific peptidase 43 (E... 43.5 7e-04 mmu:75083 Usp50, 1700086G18Rik, 4930511O11Rik; ubiquitin speci... 43.1 8e-04 hsa:10869 USP19, ZMYND9; ubiquitin specific peptidase 19 (EC:3... 43.1 0.001 mmu:22258 Usp4, F730026I20Rik, KIAA4155, Unp, mKIAA4155; ubiqu... 42.4 0.002 hsa:64854 USP46, FLJ11850, FLJ12552, FLJ14283, FLJ39393; ubiqu... 41.6 0.003 dre:449927 usp4, im:7139722, unpEL, wu:fa11d11; ubiquitin spec... 41.6 0.003 xla:398480 usp4, MGC130831; ubiquitin specific peptidase 4 (pr... 41.2 0.003 mmu:69727 Usp46, 1190009E20Rik, 2410018I08Rik, AI451644; ubiqu... 41.2 0.003 pfa:PFE0835w ubiquitin carboxyl-terminal hydrolase 2, putative... 41.2 0.003 mmu:71472 Usp19, 8430421I07Rik, AI047774, Zmynd9; ubiquitin sp... 40.8 0.004 tpv:TP03_0714 hypothetical protein 40.0 0.007 dre:564487 usp31; ubiquitin specific peptidase 31; K11852 ubiq... 40.0 0.008 dre:561425 novel protein similar to vertebrate ubiquitin speci... 40.0 0.008 dre:569700 usp16, si:ch211-238e22.5, si:dkey-121n8.2, wu:fc76b... 39.3 0.015 dre:569679 usp3, fe50h06, wu:fe50h06; ubiquitin specific pepti... 38.9 0.017 dre:568334 ubiquitin specific protease 11-like 38.9 0.017 hsa:8237 USP11, UHX1; ubiquitin specific peptidase 11 (EC:3.4.... 38.5 0.020 dre:100149276 ubiquitin specific protease 43-like; K11856 ubiq... 38.5 0.020 ath:AT4G10570 UBP9; UBP9 (UBIQUITIN-SPECIFIC PROTEASE 9); cyst... 38.5 0.021 mmu:236733 Usp11, 6230415D12Rik, KIAA4085, MGC6649, mKIAA4085;... 38.1 0.028 ath:AT4G39910 ATUBP3; ATUBP3 (ARABIDOPSIS THALIANA UBIQUITIN-S... 37.7 0.034 ath:AT1G32850 UBP11; UBP11 (UBIQUITIN-SPECIFIC PROTEASE 11); c... 37.7 0.041 mmu:53376 Usp2, B930035K21Rik, Ubp41; ubiquitin specific pepti... 37.4 0.046 cel:ZK328.1 cyk-3; CYtoKinesis defect family member (cyk-3); K... 37.0 0.059 dre:563983 novel protein similar to vertebrate ubiquitin speci... 36.6 0.082 hsa:9099 USP2, UBP41, USP9; ubiquitin specific peptidase 2 (EC... 36.6 0.085 ath:AT4G10590 UBP10; ubiquitin carboxyl-terminal hydrolase fam... 36.2 0.11 hsa:57602 USP36, DUB1; ubiquitin specific peptidase 36 (EC:3.4... 36.2 0.13 mmu:84092 Usp8, AI574262, AW557536, Ubpy, mKIAA0055; ubiquitin... 35.4 0.18 mmu:72344 Usp36, 2700002L06Rik, mKIAA1453; ubiquitin specific ... 35.4 0.19 > tgo:TGME49_094360 ubiquitin carboxyl-terminal hydrolase, putative (EC:4.1.1.70 3.1.2.15); K12847 U4/U6.U5 tri-snRNP-associated protein 2 Length=571 Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 150/227 (66%), Positives = 176/227 (77%), Gaps = 8/227 (3%) Query 27 DTFKYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTI 86 D YNL+PTYT EDVA+LS + YGK+LDGAD++PGCVGLNNL +TDF +IQSLCT+ Sbjct 157 DDIIYNLHPTYTKEDVAQLSTRIIYGKALDGADYIPGCVGLNNLKRTDFCNAMIQSLCTV 216 Query 87 IPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFR 146 +PLRN+LLLLDLS Q Y+ VL+TL ELMRKIFN RNFKGIVSPHEFLQAVGV SKKKFR Sbjct 217 VPLRNWLLLLDLSHVQNYDPVLQTLGELMRKIFNARNFKGIVSPHEFLQAVGVASKKKFR 276 Query 147 IGEQSDPLALFAWLLNVLHRDQKDKKTGGSIIHDCFQGEVLV--TDAQSEEG------RK 198 IGEQ+DPL F WL+ +H+ K KK ++++DCFQGEV V T A+ E + Sbjct 277 IGEQADPLQFFCWLMTRVHQSAKHKKLNSNVVNDCFQGEVEVRTTTAEGEATGQPPSVSR 336 Query 199 TPFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGETDSGPTP 245 PFL+LTLDLP APIFKDSLDRNMIP +PIFDLLQKF+GE TP Sbjct 337 VPFLFLTLDLPQAPIFKDSLDRNMIPHIPIFDLLQKFNGEQIQEATP 383 > bbo:BBOV_II005180 18.m06428; u4/u6.u5 tri-snRNP-associated 65 kDa protein; K12847 U4/U6.U5 tri-snRNP-associated protein 2 Length=470 Score = 232 bits (591), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 115/209 (55%), Positives = 147/209 (70%), Gaps = 2/209 (0%) Query 33 LNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPLRNY 92 L P YT E V + ++ YGK LDG DF+PGC+GLNNL +TD+F VIIQ LCT+ +RNY Sbjct 128 LKPKYTKEYVENIDTKIVYGKGLDGTDFIPGCIGLNNLKQTDYFNVIIQVLCTVATVRNY 187 Query 93 LLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSD 152 LLLLD+ Q ++V+ TL EL+RKI+N +NFKGIVSPHEFLQAVGV SK ++IG +D Sbjct 188 LLLLDIDRIQPPDNVISTLVELIRKIYNTKNFKGIVSPHEFLQAVGVASKGLYKIGVHND 247 Query 153 PLALFAWLLNVLHRDQKDKKTGGSIIHDCFQGE--VLVTDAQSEEGRKTPFLYLTLDLPP 210 P+AL WLLN L ++KKT SI+ F G+ V D + + TPF +TLD+P Sbjct 248 PVALLTWLLNRLDTKLRNKKTKESIVAKAFGGQLNVYTQDGDNWTQKITPFKMITLDVPN 307 Query 211 APIFKDSLDRNMIPTVPIFDLLQKFDGET 239 APIFKD ++N+IP V IF LLQKF GE+ Sbjct 308 APIFKDDKEKNIIPQVSIFQLLQKFQGES 336 > ath:AT4G22350 ubiquitin carboxyl-terminal hydrolase family protein; K12847 U4/U6.U5 tri-snRNP-associated protein 2 Length=510 Score = 197 bits (500), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 110/217 (50%), Positives = 147/217 (67%), Gaps = 5/217 (2%) Query 27 DTFKYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTI 86 D ++ LNP ++ V L + ++LDG+D+LPG VGLNN+ KT+F V IQSL + Sbjct 162 DDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRV 221 Query 87 IPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFR 146 PLRN+ L+ + + K + + EL RKI++ RNFKG VSPHEFLQAV SKK+FR Sbjct 222 TPLRNFFLIPENYQHCK-SPLGHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR 280 Query 147 IGEQSDPLALFAWLLNVLHRDQKDKKTGGSIIHDCFQGEV-LVTDAQSEEGR---KTPFL 202 IG+QSDP+ +WLLN LH D + K SIIH CFQGE+ +V + Q E + + PFL Sbjct 281 IGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEYQGNENKEISRMPFL 340 Query 203 YLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGET 239 L LDLPP P+FKD +++N+IP V +FDLL+KFDGET Sbjct 341 MLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGET 377 > ath:AT4G22285 ubiquitin thiolesterase/ zinc ion binding Length=541 Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/217 (50%), Positives = 147/217 (67%), Gaps = 5/217 (2%) Query 27 DTFKYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTI 86 D ++ LNP ++ V L + ++LDG+D+LPG VGLNN+ KT+F V IQSL + Sbjct 193 DDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRV 252 Query 87 IPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFR 146 PLRN+ L+ + + K + ++ EL RKI++ RNFKG VSPHEFLQAV SKK+FR Sbjct 253 TPLRNFFLIPENYQHCK-SPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR 311 Query 147 IGEQSDPLALFAWLLNVLHRDQKDKKTGGSIIHDCFQGEV-LVTDAQSEEGR---KTPFL 202 IG+QSDP+ +WLLN LH D + K SIIH CFQGE+ +V + Q E + + FL Sbjct 312 IGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEFQGNENKEISRMSFL 371 Query 203 YLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGET 239 L LDLPP P+FKD +++N+IP V +FDLL+KFDGET Sbjct 372 MLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGET 408 > ath:AT4G22410 ubiquitin carboxyl-terminal hydrolase family protein Length=340 Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 108/217 (49%), Positives = 146/217 (67%), Gaps = 5/217 (2%) Query 27 DTFKYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTI 86 D ++ LNP ++ V L + ++LDG+D+LPG VGLNN+ KT+F V IQSL + Sbjct 78 DDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRV 137 Query 87 IPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFR 146 PLRN+ + + + K + ++ EL RKI++ RNFKG VSPHEFLQAV SKK+FR Sbjct 138 TPLRNFFHIPENYQHCK-SPLVHCFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR 196 Query 147 IGEQSDPLALFAWLLNVLHRDQKDKKTGGSIIHDCFQGEV-LVTDAQSEEGR---KTPFL 202 IG+QSDP+ +WLLN LH D + K SIIH CFQGE+ +V + Q E + + FL Sbjct 197 IGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEFQGNENKEISRMSFL 256 Query 203 YLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGET 239 L LDLPP P+FKD +++N+IP V +FDLL+KFDGET Sbjct 257 MLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGET 293 > dre:790924 usp39, wu:fb54d10, wu:fb79f05, zgc:158428; ubiquitin specific peptidase 39; K12847 U4/U6.U5 tri-snRNP-associated protein 2 Length=497 Score = 164 bits (415), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 92/241 (38%), Positives = 133/241 (55%), Gaps = 36/241 (14%) Query 31 YNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPLR 90 Y L PT+T + ++ L + ++ DG +LPG VGLNN+ D+ V++Q+L + PLR Sbjct 122 YVLKPTFTKQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPLR 181 Query 91 NYLLLLDLSEKQKYNSV-----------LKTLSELMRKIFNRRNFKGIVSPHEFLQAVGV 139 NY L E++ Y + ++ ELMRK++N RNFK VSPHE LQAV + Sbjct 182 NYFL-----EEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVL 236 Query 140 ESKKKFRIGEQSDPLALFAWLLNVLHRDQKDKKTGGSIIHDCFQGEV------------- 186 SKK F+I +Q D + +W LN LH K SII FQG + Sbjct 237 CSKKTFQITKQGDAVDFLSWFLNALHGALGGTKKKSSIITKAFQGSMRIFSKKLPHPDLP 296 Query 187 -------LVTDAQSEEGRKTPFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGET 239 L+ + EE ++ FLYLTLDLP AP++KD ++ +IP VP+F++L KF+G T Sbjct 297 PEEKEALLLKEEYQEEMSESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNT 356 Query 240 D 240 + Sbjct 357 E 357 > pfa:PF13_0096 Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein; K12847 U4/U6.U5 tri-snRNP-associated protein 2 Length=640 Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 80/140 (57%), Positives = 97/140 (69%), Gaps = 1/140 (0%) Query 27 DTFKYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTI 86 + KY L PTY E V L GKSLDG DFLPG VGLNNL TD+ VIIQ +C+I Sbjct 170 NDIKYFLKPTYNKEQVEHLCYNSVLGKSLDGGDFLPGLVGLNNLKNTDYCNVIIQLICSI 229 Query 87 IPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFR 146 IPLRN LLL + E N ++ LS+L++KI+N RNFKG+VSPHEFLQAVG+ES K F+ Sbjct 230 IPLRNTLLLYECKENIAKN-IIVVLSDLIKKIYNPRNFKGVVSPHEFLQAVGIESNKNFK 288 Query 147 IGEQSDPLALFAWLLNVLHR 166 IG + PL F WLLN ++R Sbjct 289 IGTKKYPLDFFLWLLNKIYR 308 Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 0/55 (0%) Query 187 LVTDAQSEEGRKTPFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGETDS 241 LV +++ K PF L+L LP AP+FK + + N+IP V IF+LL KFDGET++ Sbjct 452 LVKKNKNDLIVKIPFRTLSLKLPNAPVFKSTTESNIIPQVSIFELLSKFDGETET 506 > mmu:28035 Usp39, AA408960, AI894154, CGI-21, D6Wsu157e, SAD1; ubiquitin specific peptidase 39; K12847 U4/U6.U5 tri-snRNP-associated protein 2 Length=564 Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/242 (37%), Positives = 134/242 (55%), Gaps = 37/242 (15%) Query 31 YNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPLR 90 Y L PT+T + +A L + ++ DG +LPG VGLNN+ D+ ++Q+L + PLR Sbjct 190 YVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLR 249 Query 91 NYLLLLDLSEKQKYNSV-----------LKTLSELMRKIFNRRNFKGIVSPHEFLQAVGV 139 NY L E+ Y ++ ++ ELMRK++N RNFK VSPHE LQAV + Sbjct 250 NYFL-----EEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVL 304 Query 140 ESKKKFRIGEQSDPLALFAWLLNVLHRD-QKDKKTGGSIIHDCFQG-------------- 184 SKK F+I +Q D + +W LN LH KK +I++D FQG Sbjct 305 CSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLPHPDL 364 Query 185 ------EVLVTDAQSEEGRKTPFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGE 238 ++L D E ++ F+YLTLDLP AP++KD ++ +IP VP+F++L KF+G Sbjct 365 PAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGI 424 Query 239 TD 240 T+ Sbjct 425 TE 426 > hsa:10713 USP39, HSPC332, MGC75069, SAD1, SNRNP65; ubiquitin specific peptidase 39; K12847 U4/U6.U5 tri-snRNP-associated protein 2 Length=565 Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 91/242 (37%), Positives = 133/242 (54%), Gaps = 37/242 (15%) Query 31 YNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPLR 90 Y L PT+T + +A L + ++ DG +LPG VGLNN+ D+ ++Q+L + PLR Sbjct 191 YVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLR 250 Query 91 NYLLLLDLSEKQKYNSV-----------LKTLSELMRKIFNRRNFKGIVSPHEFLQAVGV 139 NY L E+ Y ++ ++ ELMRK++N RNFK VSPHE LQAV + Sbjct 251 NYFL-----EEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVL 305 Query 140 ESKKKFRIGEQSDPLALFAWLLNVLHRD-QKDKKTGGSIIHDCFQG-------------- 184 SKK F+I +Q D + +W LN LH KK +I+ D FQG Sbjct 306 CSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDL 365 Query 185 ------EVLVTDAQSEEGRKTPFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGE 238 ++L D E ++ F+YLTLDLP AP++KD ++ +IP VP+F++L KF+G Sbjct 366 PAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGI 425 Query 239 TD 240 T+ Sbjct 426 TE 427 > tpv:TP02_0821 ubiquitin carboxyl-terminal hydrolase; K12847 U4/U6.U5 tri-snRNP-associated protein 2 Length=537 Score = 155 bits (393), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 78/174 (44%), Positives = 115/174 (66%), Gaps = 12/174 (6%) Query 80 IQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGV 139 I+ +C ++PLRN L+ D+++ Q + V+ TLS+L+RKIFN +NFKGIVSPHEF+Q+VG+ Sbjct 228 IKLICVVVPLRNLFLVFDVNKVQPPDPVITTLSQLIRKIFNVKNFKGIVSPHEFVQSVGI 287 Query 140 ESKKKFRIGEQSDPLALFAWLLNVLHRDQKDKKTGG----------SIIHDCFQGEVLVT 189 + ++IG QSDP++L +WLL +H+ +K T G SI+ F GE+L+ Sbjct 288 VTNGLYKIGVQSDPVSLLSWLLARIHQKLHNKNTKGSFKTSFHIVESIVTKTFGGELLIK 347 Query 190 DAQSE--EGRKTPFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGETDS 241 + E + PF L+L +P APIFKDS+D N IP IF+LL K+DG T++ Sbjct 348 TLKKNRWETERQPFRMLSLTVPEAPIFKDSMDTNAIPQAQIFELLSKYDGVTET 401 > cel:F09D1.1 hypothetical protein; K12847 U4/U6.U5 tri-snRNP-associated protein 2 Length=602 Score = 139 bits (351), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 87/245 (35%), Positives = 126/245 (51%), Gaps = 36/245 (14%) Query 27 DTFKYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTI 86 + KY L PTYT E +A + + ++ D + + PG VGLNN+ D+ I+Q+L + Sbjct 218 EDIKYVLKPTYTKEMIASIDKQSKMVRAYDDSTYFPGVVGLNNIKANDYCNAILQALSAV 277 Query 87 IPLRNYLLLLDLSEKQKYNSVLK-----------TLSELMRKIFNRRNFKGIVSPHEFLQ 135 PLRN+ L ++ Y S+ + EL+RK++N R + VSPHE LQ Sbjct 278 RPLRNWFL-----KESNYTSIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQ 332 Query 136 AVGVESKKKFRIGEQSDPLALFAWLLNVLHRDQKDKKTGGSIIHDCFQGE--------VL 187 AV V S KKF+ +Q+D +LL LH SII F+G + Sbjct 333 AVVVCSNKKFQFIKQNDAADFMLFLLTTLHSALNGTDKKPSIISKTFRGRMRQYSRRVIP 392 Query 188 VTDAQSEEGRK------------TPFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKF 235 D E+ K +PFLYLTLDLP AP+++D +N+IP VP+ LL+KF Sbjct 393 AEDTDEEKYMKLRMPEYQEKVIESPFLYLTLDLPSAPLYRDVQLQNIIPQVPLSTLLEKF 452 Query 236 DGETD 240 DG+T+ Sbjct 453 DGKTE 457 > sce:YFR005C SAD1; Conserved zinc-finger domain protein involved in pre-mRNA splicing, required for assembly of U4 snRNA into the U4/U6 particle; K12847 U4/U6.U5 tri-snRNP-associated protein 2 Length=448 Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 21/218 (9%) Query 27 DTFKYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTI 86 ++ K+ PTY P+D+ + F L +L G +G N + D+ ++ + + Sbjct 115 NSIKFAAYPTYCPKDLEDFPRQCF---DLSNRTYLNGFIGFTNAATYDYAHSVLLLISHM 171 Query 87 IPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFR 146 +P+R++ LL + ++ +K LS ++KI++ + FK +S +F+ + V Sbjct 172 VPVRDHFLLNHFDNQGEF---IKRLSICVKKIWSPKLFKHHLSVDDFVSYLKVREGLNLN 228 Query 147 IGEQSDPLALFAWLLNVLHRDQKDKKTGGSIIHDCFQGEVLVTDAQSE-EGRKT------ 199 DP WL N + D K SI++ +G+V + +++ E ++ Sbjct 229 ---PIDPRLFLLWLFNKICSSSNDLK---SILNHSCKGKVKIAKVENKPEASESVTGKVI 282 Query 200 --PFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKF 235 PF LTLDLP F+D + +P + I LL KF Sbjct 283 VKPFWVLTLDLPEFSPFEDGNSVDDLPQINITKLLTKF 320 > cpv:cgd5_2350 SnRNP assembly defective 1 like ubiquitin C-terminal hydrolase with a UBP finger at the N-terminus ; K12847 U4/U6.U5 tri-snRNP-associated protein 2 Length=498 Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 45/210 (21%) Query 33 LNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPLRNY 92 L P + E ++ +V ++ DG +F PG +GL+N D II L I R+ Sbjct 100 LQPRFNSEIISSSLYDV--SRTFDGIEFSPGFIGLSNFGNNDSLNSIILILSRITEFRDL 157 Query 93 LLLLDLS----EKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKF--- 145 L L EK+ + +L ++ E ++KI+N N KG SP+ ++ + +S KF Sbjct 158 CLSYQLYSKEIEKRIPDPLLFSIIESIQKIYNPNNLKGKFSPYNLVKIIEKKSNGKFSFS 217 Query 146 ---------------RIGEQS----DPLALFAWLLNVLHR-----------------DQK 169 +G Q+ DP+ALF+W+ L + D+ Sbjct 218 KISNISTSSNSFIQSNVGTQNSTIIDPMALFSWITYNLKKKIDKYLRKFQIKFIPDIDKN 277 Query 170 DKKTGGSIIHDCFQGEVLVTDAQSEEGRKT 199 K+ +I C +GE+ ++ +K+ Sbjct 278 TNKSNMNIFDVCIKGELYNKASKYPNNKKS 307 > tgo:TGME49_063420 ubiquitin carboxyl-terminal hydrolase, putative (EC:3.1.2.15); K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=1100 Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 42/188 (22%) Query 63 GCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNR- 121 G GL+NL T F +Q L ++PL Y L +V+ T L R Sbjct 353 GICGLSNLGNTCFLNSAVQCLSKVLPLSYYFLSGKFVADINEENVMGTQGRLARAYHATL 412 Query 122 RNF----KGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD---------- 167 R+ + ++P + AVG +++F Q D L A+LL+ LH D Sbjct 413 RDMWFGGESSLAPRDLKAAVG-RVREEFLGYNQQDSQELIAFLLDGLHEDLNRIKKKPYY 471 Query 168 --------------------QKDKKTGGSIIHDCFQGEVLVTDAQSEEGRKT-----PFL 202 Q+ K+ S+I D FQG+ + + RK PF+ Sbjct 472 ESKIEGGPEKPDAQVAELSWQRHKEINDSVIVDLFQGQYR-SRLECPACRKVSVTFDPFM 530 Query 203 YLTLDLPP 210 YL+L +PP Sbjct 531 YLSLPVPP 538 > mmu:14479 Usp15, 4921514G19Rik, AI327321, E430033I05Rik, Gcap18, mKIAA0529; ubiquitin specific peptidase 15 (EC:3.4.19.12); K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=981 Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 76/187 (40%), Gaps = 42/187 (22%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNS-------VLKTLSEL 114 PG GL+NL T F IQ L PL Y L E+ +++ + K+ +EL Sbjct 286 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 345 Query 115 MRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD------- 167 ++++++ + V+P F VG +F +Q D L A+LL+ LH D Sbjct 346 IKQMWSGK--FSYVTPRAFKTQVG-RFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKK 402 Query 168 ----------QKDK-----------KTGGSIIHDCFQGEVLVTDAQSEEGRKT----PFL 202 + DK K SII D F G T E + + PF Sbjct 403 PYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFC 462 Query 203 YLTLDLP 209 YLTL LP Sbjct 463 YLTLPLP 469 > hsa:9958 USP15, KIAA0529, MGC131982, MGC149838, MGC74854, UNPH4; ubiquitin specific peptidase 15 (EC:3.4.19.12); K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=952 Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 76/187 (40%), Gaps = 42/187 (22%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNS-------VLKTLSEL 114 PG GL+NL T F IQ L PL Y L E+ +++ + K+ +EL Sbjct 257 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAEL 316 Query 115 MRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD------- 167 ++++++ + V+P F VG +F +Q D L A+LL+ LH D Sbjct 317 IKQMWSGK--FSYVTPRAFKTQVG-RFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKK 373 Query 168 ----------QKDK-----------KTGGSIIHDCFQGEVLVTDAQSEEGRKT----PFL 202 + DK K SII D F G T E + + PF Sbjct 374 PYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFC 433 Query 203 YLTLDLP 209 YLTL LP Sbjct 434 YLTLPLP 440 > cel:H34C03.2 hypothetical protein; K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=900 Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 10/113 (8%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLL----LDLSEKQ---KYNSVLKTLSEL 114 PG GL+NL T F A Q L + PLR Y L D++E + + + EL Sbjct 272 PGACGLSNLGNTCFMASAFQCLSNMPPLREYFLANTYQNDINEDNPLGTHGHLAMAVGEL 331 Query 115 MRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD 167 M+ +++ ++P +F +G + +F Q D L A++L+ LH D Sbjct 332 MKGMWS--GDYASINPRKFKSIIG-QFAPRFNGYSQQDAHELMAYVLDGLHED 381 > dre:100329394 usp46, si:ch73-16a12.1; ubiquitin specific peptidase 46; K11842 ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.1.2.15] Length=370 Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 9/139 (6%) Query 66 GLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFK 125 GL N T + ++Q+L P R +L + +K+K N +L L++L I ++ Sbjct 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKKKEN-LLTCLADLFHSIATQKKKV 94 Query 126 GIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLN----VLHRDQKDKKTGGSIIHDC 181 G++ P +F+ + E+ F Q D +LLN +L ++K +K G + ++ Sbjct 95 GVIPPKKFISRLRKEN-DLFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNGRLKNN- 152 Query 182 FQGEVLVTDAQSEEGRKTP 200 G + TD + E+ + P Sbjct 153 --GTAIATDTEPEQNKIDP 169 > hsa:7375 USP4, MGC149848, MGC149849, UNP, Unph; ubiquitin specific peptidase 4 (proto-oncogene) (EC:3.4.19.12); K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=963 Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 83/206 (40%), Gaps = 46/206 (22%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDL-SEKQKYN------SVLKTLSEL 114 PG GL NL T F +Q L PL +Y L + +E + N + + +EL Sbjct 299 PGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAEL 358 Query 115 MRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD------- 167 ++++++ R+ V+P F VG +F +Q D L A+LL+ LH D Sbjct 359 IKQMWSGRD--AHVAPRMFKTQVG-RFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKK 415 Query 168 ---------------------QKDKKTGGSIIHDCFQGEVLVTDAQSEEGRKT----PFL 202 + + S+I D F G T E + + PF Sbjct 416 PYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFC 475 Query 203 YLTLDLPPAPIFKDS-LDRNMIPTVP 227 YLTL P P+ KD ++ ++P P Sbjct 476 YLTL---PLPLKKDRVMEVFLVPADP 498 > mmu:216835 Usp43, 9130017K11Rik, B930051C24, C630032K07Rik; ubiquitin specific peptidase 43 (EC:3.4.19.12); K11856 ubiquitin carboxyl-terminal hydrolase 43 [EC:3.1.2.15] Length=1132 Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 4/121 (3%) Query 54 SLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLSE 113 S DGA PG GL N T F ++Q L L +L L V + L+ Sbjct 91 SGDGAR-PPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPGRAEVTEQLAA 149 Query 114 LMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRDQKDKKT 173 L+R ++ R + + EF AV + +F+ Q D L WLL+ +H D + Sbjct 150 LVRALWTREYTPQLSA--EFKNAVS-KYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSAH 206 Query 174 G 174 G Sbjct 207 G 207 > hsa:124739 USP43, FLJ30626; ubiquitin specific peptidase 43 (EC:3.4.19.12); K11856 ubiquitin carboxyl-terminal hydrolase 43 [EC:3.1.2.15] Length=1123 Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 4/119 (3%) Query 56 DGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLSELM 115 DGA PG GL N T F ++Q L L +L L V + L+ L+ Sbjct 93 DGAR-PPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPGRAEVTEQLAALV 151 Query 116 RKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRDQKDKKTG 174 R ++ R + + EF AV + +F+ Q D L WLL+ +H D + G Sbjct 152 RALWTREYTPQLSA--EFKNAVS-KYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRG 207 > mmu:75083 Usp50, 1700086G18Rik, 4930511O11Rik; ubiquitin specific peptidase 50 (EC:3.4.19.12) Length=390 Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 69/172 (40%), Gaps = 28/172 (16%) Query 63 GCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLL--LDLSEKQKYNSVLKTLSELMRKIFN 120 G GL NL T + I+Q LC++ PL Y L + K+ + V + LM ++ Sbjct 43 GVTGLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKYITALKKDCSEVTTAFAYLMTDMWL 102 Query 121 RRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLH--------RDQKDKK 172 + VSP FL AVG F Q D ++LN LH R +K+ Sbjct 103 GDS--DCVSPEIFLSAVG-SLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRRRVNEKR 159 Query 173 TG-----------GSIIHDCFQGE----VLVTDAQSEEGRKTPFLYLTLDLP 209 TG SII F+G+ + +S + F L+L +P Sbjct 160 TGQSCCRKVPAQETSIITRLFEGQLSYSITCLKCESCTHKNEVFTILSLPIP 211 > hsa:10869 USP19, ZMYND9; ubiquitin specific peptidase 19 (EC:3.4.19.12); K11847 ubiquitin carboxyl-terminal hydrolase 19 [EC:3.1.2.15] Length=1419 Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 71/187 (37%), Gaps = 40/187 (21%) Query 61 LPGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLSELMR--KI 118 LPG GL NL T F +IQSL LR++ + YN+ L T L + Sbjct 594 LPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAV 653 Query 119 FNRRNFKGIVSPHEF----LQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD------- 167 R +KG + H F L+A+ +F Q D A+LL+ LH D Sbjct 654 LLRALWKG--THHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNK 711 Query 168 ---------------------QKDKKTGGSIIHDCFQGEV---LVTDAQSEEGRK-TPFL 202 Q+ K S I D FQG+ LV ++ PFL Sbjct 712 PYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFL 771 Query 203 YLTLDLP 209 YL + LP Sbjct 772 YLPVPLP 778 > mmu:22258 Usp4, F730026I20Rik, KIAA4155, Unp, mKIAA4155; ubiquitin specific peptidase 4 (proto-oncogene) (EC:3.4.19.12); K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=962 Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 82/206 (39%), Gaps = 46/206 (22%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDL-SEKQKYN------SVLKTLSEL 114 PG GL NL T F +Q L PL Y L + +E + N + + +EL Sbjct 299 PGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAEL 358 Query 115 MRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD------- 167 ++++++ R+ V+P F VG +F +Q D L A++L+ LH D Sbjct 359 IKQMWSGRDTH--VAPRMFKTQVG-RFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKK 415 Query 168 ---------------------QKDKKTGGSIIHDCFQGEVLVTDAQSEEGRKT----PFL 202 + + S+I D F G T E + + PF Sbjct 416 PYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFC 475 Query 203 YLTLDLPPAPIFKDS-LDRNMIPTVP 227 YLTL P P+ KD ++ ++P P Sbjct 476 YLTL---PLPLKKDRIMEVFLVPADP 498 > hsa:64854 USP46, FLJ11850, FLJ12552, FLJ14283, FLJ39393; ubiquitin specific peptidase 46 (EC:3.4.19.12); K11842 ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.1.2.15] Length=359 Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 28/169 (16%) Query 66 GLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFK 125 GL N T + ++Q+L P R +L +K+K N +L L++L I ++ Sbjct 29 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKEN-LLTCLADLFHSIATQKKKV 87 Query 126 GIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLN----VLHRDQKDKKTGGSI---- 177 G++ P +F+ + E+ F Q D +LLN +L ++K +K G + Sbjct 88 GVIPPKKFISRLRKEN-DLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGN 146 Query 178 --------------IHDCFQG----EVLVTDAQSEEGRKTPFLYLTLDL 208 +H+ FQG E + ++ + FL L++D+ Sbjct 147 MNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDV 195 > dre:449927 usp4, im:7139722, unpEL, wu:fa11d11; ubiquitin specific protease 4 (proto-oncogene); K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=1006 Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 84/212 (39%), Gaps = 46/212 (21%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDL-SEKQKYN------SVLKTLSEL 114 PG GL+NL T F +Q L PL Y L +E + N + + ++L Sbjct 313 PGLCGLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEINRENPLGMRGEIAEAYADL 372 Query 115 MRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRDQKDKKT- 173 +++++ R+ V+P F VG +F +Q D L A+LL+ LH D K Sbjct 373 VKQMWLSRS--SYVAPRTFKTQVG-RFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKK 429 Query 174 ---------------------------GGSIIHDCFQGEVLVTDAQSEEGRKT----PFL 202 SII D F G T E + + PF Sbjct 430 PYLALRDAEGRPDEIVAKEAWANHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDPFC 489 Query 203 YLTLDLPPAPIFKD-SLDRNMIPTVPIFDLLQ 233 YLTL P P+ KD +++ ++ T P F +Q Sbjct 490 YLTL---PLPMKKDRTMEVYLVRTDPQFRAMQ 518 > xla:398480 usp4, MGC130831; ubiquitin specific peptidase 4 (proto-oncogene); K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=975 Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 71/187 (37%), Gaps = 42/187 (22%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDL-SEKQKYN------SVLKTLSEL 114 PG GL+NL T F +Q L PL Y L + E + N + +EL Sbjct 319 PGLCGLSNLGNTCFMNSALQCLSNSPPLTRYFLTDEYKKEINRENPLGMKGEIAVAYAEL 378 Query 115 MRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD------- 167 +R+I++ + V+P F VG +F +Q D L A+LL+ LH D Sbjct 379 IRQIWSGDH--SYVAPRMFKTQVG-RFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKK 435 Query 168 ---------------------QKDKKTGGSIIHDCFQGEVLVTDAQSEEGRKT----PFL 202 + + SII D F G T E + + PF Sbjct 436 PYLELKDANGRPDSIVAAEAWENHLRRNNSIIVDIFHGLFKSTLVCPECHKVSVTFDPFC 495 Query 203 YLTLDLP 209 YLTL LP Sbjct 496 YLTLPLP 502 > mmu:69727 Usp46, 1190009E20Rik, 2410018I08Rik, AI451644; ubiquitin specific peptidase 46 (EC:3.4.19.12); K11842 ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.1.2.15] Length=366 Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 28/169 (16%) Query 66 GLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFK 125 GL N T + ++Q+L P R +L +K+K N +L L++L I ++ Sbjct 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKEN-LLTCLADLFHSIATQKKKV 94 Query 126 GIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLN----VLHRDQKDKKTGGSI---- 177 G++ P +F+ + E+ F Q D +LLN +L ++K +K G + Sbjct 95 GVIPPKKFISRLRKEN-DLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGN 153 Query 178 --------------IHDCFQG----EVLVTDAQSEEGRKTPFLYLTLDL 208 +H+ FQG E + ++ + FL L++D+ Sbjct 154 MNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDV 202 > pfa:PFE0835w ubiquitin carboxyl-terminal hydrolase 2, putative (EC:3.1.2.15); K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=1332 Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 76/191 (39%), Gaps = 52/191 (27%) Query 66 GLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVL-----------KTLSEL 114 GL NL T F +Q L I+ NY L Y++ + +TL+E+ Sbjct 313 GLINLGNTCFLNSSLQCLSKILKFSNYFLNGSFWNHINYSNPVGQHGRLAKAYYETLTEM 372 Query 115 MRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD------- 167 + N+R+ +P +A+ E + +F +Q D L A+LL+ LH D Sbjct 373 WK--INKRDCP--YAPKVLKEAIS-EKRDEFYGYQQHDSQELLAFLLDGLHEDLNLIRKK 427 Query 168 -----------------------QKDKKTGGSIIHDCFQGEVLVTDAQSEEGRKT----- 199 + K+ SII D FQG+ + Q + +K Sbjct 428 PYYEEKLQGGVDKLDVDVAEASWNRHKEINNSIIVDLFQGQYR-SRLQCPKCKKVSITFD 486 Query 200 PFLYLTLDLPP 210 PF+YL++ LPP Sbjct 487 PFMYLSIPLPP 497 > mmu:71472 Usp19, 8430421I07Rik, AI047774, Zmynd9; ubiquitin specific peptidase 19 (EC:3.4.19.12); K11847 ubiquitin carboxyl-terminal hydrolase 19 [EC:3.1.2.15] Length=1324 Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 69/185 (37%), Gaps = 36/185 (19%) Query 61 LPGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLSELMR--KI 118 LPG GL NL T F +IQSL LR++ + YN+ L T L + Sbjct 536 LPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAV 595 Query 119 FNRRNFKGIVSPHE--FLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD--------- 167 R +KG + L+A+ +F Q D A+LL+ LH D Sbjct 596 LLRALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPY 655 Query 168 -------------------QKDKKTGGSIIHDCFQGEV---LVTDAQSEEGRK-TPFLYL 204 Q+ K S I D FQG+ LV ++ PFLYL Sbjct 656 TETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYL 715 Query 205 TLDLP 209 + LP Sbjct 716 PVPLP 720 > tpv:TP03_0714 hypothetical protein Length=574 Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 0/39 (0%) Query 38 TPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFF 76 + EDV R SAE+ GKS+D P C G NN+ + ++ Sbjct 206 SAEDVVRYSAELNSGKSVDSKANYPKCCGCNNMCRNSYY 244 > dre:564487 usp31; ubiquitin specific peptidase 31; K11852 ubiquitin carboxyl-terminal hydrolase 31 [EC:3.1.2.15] Length=1295 Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 50/134 (37%), Gaps = 35/134 (26%) Query 59 DFLPGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDL------SEKQKYNSVL---- 108 D +PG GL N T F I+Q L YL L EK K N V+ Sbjct 85 DKIPGVAGLKNHGNTCFMNAILQCLSNTELFAEYLALEQYRGDQTDDEKPKTNGVVGRKG 144 Query 109 --------KTLSELMRKIF-------NRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDP 153 + LS L+R ++ + R+FK VS S ++R Q D Sbjct 145 AQDRGEVTEQLSGLVRALWTFEYTPQHSRDFKNAVS----------RSAMQYRGNAQHDA 194 Query 154 LALFAWLLNVLHRD 167 WLL+ +H D Sbjct 195 QEFLLWLLDRVHED 208 > dre:561425 novel protein similar to vertebrate ubiquitin specific peptidase 19 (USP19); K11847 ubiquitin carboxyl-terminal hydrolase 19 [EC:3.1.2.15] Length=1489 Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 17/177 (9%) Query 36 TYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLL 95 T+TP S EV K PG GL NL T F +IQSL LR+Y Sbjct 614 THTPPVGNERSEEVEEKKVCH-----PGFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHD 668 Query 96 LDLSEKQKYNSVLKTLSELMR--KIFNRRNFKGIVSPHEF----LQAVGVESKKKFRIGE 149 + N+ L T L + R +KG + H F L+A+ +F Sbjct 669 RGFESEINCNNPLGTGGRLAIGFAVLLRALWKG--THHAFQPSKLKAIVASKASQFTGYA 726 Query 150 QSDPLALFAWLLNVLHRDQ---KDKKTGGSIIHDCFQGEVLVTDA-QSEEGRKTPFL 202 Q D A+LL+ LH D ++K ++ D Q EV+ +A Q + R F+ Sbjct 727 QHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRQDEVVAEEAWQRHKMRNDSFI 783 > dre:569700 usp16, si:ch211-238e22.5, si:dkey-121n8.2, wu:fc76b02, wu:fc76b08; ubiquitin specific protease 16 (EC:3.4.19.12); K11844 ubiquitin carboxyl-terminal hydrolase 16/45 [EC:3.1.2.15] Length=815 Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 35/176 (19%) Query 66 GLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLS------------- 112 GL+NL T FF ++QSL LR LL ++E++ S+ LS Sbjct 209 GLSNLGNTCFFNAVVQSLSQTQYLRE--LLKQIAEEKSSFSITPALSSELDPLQIQLERP 266 Query 113 --------ELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVL 164 +LM +I + KG+V+P E V + +F+ +Q D L +LL+ + Sbjct 267 GSLTLAMCQLMNEI--QETKKGVVTPKELFTQV-CKKAPRFKGFQQQDSQELLRYLLDGM 323 Query 165 HRDQKDKKTGGSIIHDCFQGEVLVTDAQSEEGRKTPFLYLTLDLPPAPIFKDSLDR 220 R ++ K+ I+ E L + ++ E +T + + AP K+ +DR Sbjct 324 -RAEEAKRVNSGIL------EALKSSGKNFEAEQTKKIVKEYEKDGAP--KNFVDR 370 > dre:569679 usp3, fe50h06, wu:fe50h06; ubiquitin specific peptidase 3 Length=524 Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust. Identities = 50/214 (23%), Positives = 76/214 (35%), Gaps = 44/214 (20%) Query 65 VGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLL--------DLSEKQKYNSVLK-----TL 111 GL NL T F I+QSL I Y L + ++ Y++ + +L Sbjct 163 TGLRNLGNTCFMNAILQSLSNIQVFSCYFKELPSVALRSGKTAGRRMYHTRSQGDSSVSL 222 Query 112 SELMRKIFNR--RNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRDQK 169 E RK + + SP + + FR +Q D +LL+ LHR+ + Sbjct 223 VEEFRKTLCSLWQGSQTAFSPDALFYVIW-KIMPSFRGYQQQDAHEFLRYLLDHLHREMQ 281 Query 170 DKKTGG----------------------------SIIHDCFQGEVLVTDAQSEEGRKTPF 201 K G S+ Q EV +E + PF Sbjct 282 GNKNGSPSPPVTSDEPNHASESKCFINGTSTIVTSVFGGVLQNEVYCLICGTESRKFDPF 341 Query 202 LYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKF 235 L L+LD+P K + D+ PT + D L+ F Sbjct 342 LDLSLDIPNQFRIKTTKDQEPGPTCTLSDCLRSF 375 > dre:568334 ubiquitin specific protease 11-like Length=658 Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 80/208 (38%), Gaps = 47/208 (22%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLL-LDLSEKQKYN------SVLKTLSEL 114 PG GL NL T F +Q L PL Y L L L E N + + +++ Sbjct 290 PGVCGLTNLGNTCFMNSALQCLSNTPPLTEYFLKNLYLEELNFSNPLGMKGEIAEAYADV 349 Query 115 MRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD------- 167 ++++++ R++ V P F VG +F +Q D L ++LL+ LH D Sbjct 350 IKQMWSGRHYS--VVPRVFKTKVG-HFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKK 406 Query 168 ---------------------QKDKKTGGSIIHDCFQGEVLVTDAQSEEGRKT----PFL 202 + + S+I D F G T E + + PF Sbjct 407 EYIELRDADGRPDQEVAEEAWRNHLRRNDSVIVDTFHGLFKSTLVCPECNKVSVTFDPFC 466 Query 203 YLTLDLPPA-----PIFKDSLDRNMIPT 225 YL++ LP + +F SLD PT Sbjct 467 YLSVPLPVSKERVMEVFYVSLDPTAKPT 494 > hsa:8237 USP11, UHX1; ubiquitin specific peptidase 11 (EC:3.4.19.12); K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=963 Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 44/205 (21%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNS-------VLKTLSEL 114 PG GL NL T F +Q L + L Y L E+ + + + + ++L Sbjct 306 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADL 365 Query 115 MRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD------- 167 +++ ++ + + IV PH F VG +F +Q D L ++LL+ LH D Sbjct 366 VKQAWSGHH-RSIV-PHVFKNKVG-HFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKK 422 Query 168 ---------------------QKDKKTGGSIIHDCFQG----EVLVTDAQSEEGRKTPFL 202 Q K+ S+I D F G ++ D + PF Sbjct 423 EYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFC 482 Query 203 YLTLDLPPAPIFKDSLDRNMIPTVP 227 YL++ LP + K L+ IP P Sbjct 483 YLSVPLPIS--HKRVLEVFFIPMDP 505 > dre:100149276 ubiquitin specific protease 43-like; K11856 ubiquitin carboxyl-terminal hydrolase 43 [EC:3.1.2.15] Length=1163 Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 23/128 (17%) Query 58 ADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLSELMRK 117 D PG +GL N T F ++Q L L YL L E+ K + ++ +R Sbjct 109 GDKTPGVLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGL----ERYKRDVCHNGINGFIRN 164 Query 118 IFNRRNFKGIVSPH-----------EFLQAVGVESK-------KKFRIGEQSDPLALFAW 159 N +N KG V+ ++ + E K +FR Q D L W Sbjct 165 -GNGQNEKGEVTERLAVLVRALWTFQYTPQLSAEFKMTVSKYGAQFRGNSQHDALEFLLW 223 Query 160 LLNVLHRD 167 LL+ LH D Sbjct 224 LLDRLHED 231 > ath:AT4G10570 UBP9; UBP9 (UBIQUITIN-SPECIFIC PROTEASE 9); cysteine-type endopeptidase/ ubiquitin thiolesterase; K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=923 Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 91/238 (38%), Gaps = 55/238 (23%) Query 28 TFKYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTII 87 T ++L P T ED R S + GK G G GL+NL T F +Q L Sbjct 273 TSNFSLFPRITSEDDGRDSLSIL-GKGEKG-----GLAGLSNLGNTCFMNSALQCLAHTP 326 Query 88 PLRNYLLLLDLSEKQKYNSVLKTLSE-------LMRKIFNRRNFKGIVSPHEFLQAVGVE 140 P+ Y L D S+ ++ L E L++K+++ + + V+P F + Sbjct 327 PIVEY-FLQDYSDDINRDNPLGMCGELAIAFGDLLKKLWS--SGRNAVAPRAFKTKLA-R 382 Query 141 SKKKFRIGEQSDPLALFAWLLNVLHRD----------------------------QKDKK 172 +F Q D L A+LL+ LH D K Sbjct 383 FAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKA 442 Query 173 TGGSIIHDCFQGEVLVTDAQSEEGRKT----PFLYLTLDLPPAPIFKDSLDRNMIPTV 226 S+I D QG+ T G+ + PF+YL++ LP +L R+M TV Sbjct 443 RNDSVIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSVPLP------STLTRSMTITV 494 > mmu:236733 Usp11, 6230415D12Rik, KIAA4085, MGC6649, mKIAA4085; ubiquitin specific peptidase 11 (EC:3.4.19.12); K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=921 Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 68/185 (36%), Gaps = 38/185 (20%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFN- 120 PG GL NL T F +Q L + L Y L E+ + + L EL + Sbjct 254 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADL 313 Query 121 -RRNFKGI---VSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD--------- 167 ++ + G + P+ F VG +F +Q D L ++LL+ LH D Sbjct 314 VKQTWSGYHRSIVPNVFKNKVG-HFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEY 372 Query 168 -------------------QKDKKTGGSIIHDCFQG----EVLVTDAQSEEGRKTPFLYL 204 Q K+ S+I D F G ++ D + PF YL Sbjct 373 VELCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYL 432 Query 205 TLDLP 209 ++ LP Sbjct 433 SVPLP 437 > ath:AT4G39910 ATUBP3; ATUBP3 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 3); ubiquitin-specific protease; K11842 ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.1.2.15] Length=371 Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%) Query 66 GLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNS---VLKTLSELMRKIFNRR 122 G N T + ++Q+L +P R LL S K ++ ++ L++L +I +++ Sbjct 24 GFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISSQK 83 Query 123 NFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLN----VLHRDQKDKKT 173 G+++P F+Q + ++ + FR D +LLN +L ++ K KT Sbjct 84 KKTGVIAPKRFVQRLKKQN-ELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKT 137 > ath:AT1G32850 UBP11; UBP11 (UBIQUITIN-SPECIFIC PROTEASE 11); cysteine-type endopeptidase/ ubiquitin thiolesterase; K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=892 Score = 37.7 bits (86), Expect = 0.041, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 77/202 (38%), Gaps = 47/202 (23%) Query 63 GCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYN------SVLKTLSELMR 116 G GL NL T F +Q L P+ Y L S+ N + EL+R Sbjct 299 GLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLR 358 Query 117 KIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD--------- 167 K+++ + + V+P F + +F Q D + A+LL+ LH D Sbjct 359 KLWS--SGQNTVAPRAFKTKLA-RFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPY 415 Query 168 --QKD-----------------KKTGGSIIHDCFQGEVLVTDAQSEEGRKT----PFLYL 204 KD K S+I D FQG+ T + G+ + PF+YL Sbjct 416 IEAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYKSTLVCPDCGKISITFDPFMYL 475 Query 205 TLDLPPAPIFKDSLDRNMIPTV 226 +L LP S R+M TV Sbjct 476 SLPLPS------SRTRSMTVTV 491 > mmu:53376 Usp2, B930035K21Rik, Ubp41; ubiquitin specific peptidase 2 (EC:3.4.19.12); K11833 ubiquitin carboxyl-terminal hydrolase 2/21 [EC:3.1.2.15] Length=619 Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query 63 GCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLL----LLDLSE-KQKYNSVLKTLSELMRK 117 G GL NL T F I+Q L LR+Y L + DL + ++++ ++L++ Sbjct 279 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 338 Query 118 IFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD 167 I+ + +VSP EF + +F Q D +LL+ LH + Sbjct 339 IWT-SSPNDVVSPSEFKTQI-QRYAPRFMGYNQQDAQEFLRFLLDGLHNE 386 > cel:ZK328.1 cyk-3; CYtoKinesis defect family member (cyk-3); K11837 ubiquitin carboxyl-terminal hydrolase 6/32 [EC:3.1.2.15] Length=1178 Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 11/112 (9%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNSVLK--------TLSE 113 PG VGL N + IQ L + PL Y L D + K ++ + ++ Sbjct 567 PGAVGLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAK 626 Query 114 LMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLH 165 L+R+++ + K ++P++F A+ + S F EQ D A+LL+ LH Sbjct 627 LLREMWAAK--KKNIAPNDFNDAIRL-SSDMFECSEQHDCQEFVAFLLDQLH 675 > dre:563983 novel protein similar to vertebrate ubiquitin specific protease 43 (USP43) (EC:3.1.2.15); K11856 ubiquitin carboxyl-terminal hydrolase 43 [EC:3.1.2.15] Length=1122 Score = 36.6 bits (83), Expect = 0.082, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 32/127 (25%) Query 62 PGCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLLL----LDLSEKQKYNSVLKT------- 110 PG GL N T F ++Q L L YL L +L+E+ + N ++K+ Sbjct 111 PGVQGLKNHGNTCFMNAVVQCLSNTELLAEYLGLEQYKYELNER-RINGMMKSEEVRGEV 169 Query 111 ---LSELMRKIFNRR-------NFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWL 160 L+ L+R ++ +FK +V+ + +F+ Q D L WL Sbjct 170 TDKLASLVRALWTNDYTPQLSVDFKSVVAKY----------GSQFKGNAQHDALEFLLWL 219 Query 161 LNVLHRD 167 L+ +H D Sbjct 220 LDCVHED 226 > hsa:9099 USP2, UBP41, USP9; ubiquitin specific peptidase 2 (EC:3.4.19.12); K11833 ubiquitin carboxyl-terminal hydrolase 2/21 [EC:3.1.2.15] Length=605 Score = 36.6 bits (83), Expect = 0.085, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query 63 GCVGLNNLSKTDFFAVIIQSLCTIIPLRNYLL----LLDLSE-KQKYNSVLKTLSELMRK 117 G GL NL T F I+Q L LR+Y L + DL + ++++ ++L++ Sbjct 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 324 Query 118 IFNRRNFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHRD 167 I+ + +VSP EF + +F Q D +LL+ LH + Sbjct 325 IWT-SSPNDVVSPSEFKTQI-QRYAPRFVGYNQQDAQEFLRFLLDGLHNE 372 > ath:AT4G10590 UBP10; ubiquitin carboxyl-terminal hydrolase family protein; K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15] Length=910 Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 90/238 (37%), Gaps = 55/238 (23%) Query 28 TFKYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTII 87 T ++L P T ED S + GK G G GL+NL T F +Q L Sbjct 272 TSNFSLFPRITSEDDGSNSLSIL-GKGEKG-----GLAGLSNLGNTCFMNSALQCLAHTP 325 Query 88 PLRNYLLLLDLSEKQKYNSVLKTLSE-------LMRKIFNRRNFKGIVSPHEFLQAVGVE 140 P+ Y L D S+ ++ L E L++K+++ + + V+P F + Sbjct 326 PIVEY-FLQDYSDDINRDNPLGMCGELAIAFGDLLKKLWS--SGRNSVAPRAFKTKLA-R 381 Query 141 SKKKFRIGEQSDPLALFAWLLNVLHRD----------------------------QKDKK 172 +F Q D L A+LL+ LH D K Sbjct 382 FAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKA 441 Query 173 TGGSIIHDCFQGEVLVTDAQSEEGRKT----PFLYLTLDLPPAPIFKDSLDRNMIPTV 226 S+I D QG+ T G+ + PF+YL++ LP +L R+M TV Sbjct 442 RNDSVIVDVCQGQYKSTLVCPACGKISITFDPFMYLSVPLP------STLTRSMTVTV 493 > hsa:57602 USP36, DUB1; ubiquitin specific peptidase 36 (EC:3.4.19.12); K11855 ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.1.2.15] Length=1123 Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust. Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 16/157 (10%) Query 65 VGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSEKQKYNS--VLKTLSELMRKIFNRR 122 GL+NL T F IQ L PL NYLL + + S +L + + + F Sbjct 122 AGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIVQAFA-- 179 Query 123 NFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHR------DQKDKKTGG- 175 N + P F++ + + + FR G Q D + ++ + + + D++T Sbjct 180 NSGNAIKPVSFIRDL-KKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238 Query 176 SIIHDCFQG----EVLVTDAQSEEGRKTPFLYLTLDL 208 +++H F G V + +S P+L + L++ Sbjct 239 TLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEI 275 > mmu:84092 Usp8, AI574262, AW557536, Ubpy, mKIAA0055; ubiquitin specific peptidase 8 (EC:3.4.19.12); K11839 ubiquitin carboxyl-terminal hydrolase 8 [EC:3.1.2.15] Length=1080 Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 6/143 (4%) Query 30 KYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTIIPL 89 + N P Y +++RLSA + P GL NL T + I+Q LC L Sbjct 704 RENKPPCYPKAEISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHL 763 Query 90 RNYLLLLDLSEKQKYNSVLKTLSELMRK--IFNRRNFKG---IVSPHEFLQAVGVESKKK 144 +Y + +++L E+ + I + + G +SP +F +G + + Sbjct 764 ADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALWTGQYRYISPKDFKVTIG-KINDQ 822 Query 145 FRIGEQSDPLALFAWLLNVLHRD 167 F Q D L +L++ LH D Sbjct 823 FAGSSQQDSQELLLFLMDGLHED 845 > mmu:72344 Usp36, 2700002L06Rik, mKIAA1453; ubiquitin specific peptidase 36 (EC:3.1.2.15 3.4.19.12); K11855 ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.1.2.15] Length=1098 Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 16/157 (10%) Query 65 VGLNNLSKTDFFAVIIQSLCTIIPLRNYLLLLDLSE--KQKYNSVLKTLSELMRKIFNRR 122 GL+NL T F IQ L PL NYLL + + Q +L + M + F Sbjct 122 AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGGFCMLCLMQNHMVQAFA-- 179 Query 123 NFKGIVSPHEFLQAVGVESKKKFRIGEQSDPLALFAWLLNVLHR------DQKDKKTGG- 175 N + P F++ + + + FR G Q D + ++ + + + D++T Sbjct 180 NSGNAIKPVSFIRDL-KKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQAT 238 Query 176 SIIHDCFQG----EVLVTDAQSEEGRKTPFLYLTLDL 208 +++H F G V + +S P+L + L++ Sbjct 239 TLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEI 275 Lambda K H 0.321 0.138 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 8828802264 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40