bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_3761_orf2
Length=89
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_094360 ubiquitin carboxyl-terminal hydrolase, putat... 111 6e-25
pfa:PF13_0096 Ubiquitin Carboxyl-terminal Hydrolase-like zinc ... 68.9 4e-12
tpv:TP02_0821 ubiquitin carboxyl-terminal hydrolase; K12847 U4... 67.8 7e-12
dre:790924 usp39, wu:fb54d10, wu:fb79f05, zgc:158428; ubiquiti... 65.5 4e-11
hsa:10713 USP39, HSPC332, MGC75069, SAD1, SNRNP65; ubiquitin s... 65.5 4e-11
mmu:28035 Usp39, AA408960, AI894154, CGI-21, D6Wsu157e, SAD1; ... 64.7 7e-11
bbo:BBOV_II005180 18.m06428; u4/u6.u5 tri-snRNP-associated 65 ... 58.9 3e-09
ath:AT4G22350 ubiquitin carboxyl-terminal hydrolase family pro... 55.5 4e-08
ath:AT4G22285 ubiquitin thiolesterase/ zinc ion binding 54.3 8e-08
cpv:cgd5_2350 SnRNP assembly defective 1 like ubiquitin C-term... 52.0 5e-07
cel:F09D1.1 hypothetical protein; K12847 U4/U6.U5 tri-snRNP-as... 51.6 7e-07
hsa:8237 USP11, UHX1; ubiquitin specific peptidase 11 (EC:3.4.... 40.4 0.001
mmu:236733 Usp11, 6230415D12Rik, KIAA4085, MGC6649, mKIAA4085;... 40.0 0.002
dre:494031 usp2a, zgc:92134; ubiquitin specific peptidase 2a (... 37.7 0.008
hsa:9099 USP2, UBP41, USP9; ubiquitin specific peptidase 2 (EC... 36.2 0.028
dre:564487 usp31; ubiquitin specific peptidase 31; K11852 ubiq... 35.8 0.031
mmu:30941 Usp21, ESTM28, Usp16, Usp23, W53272; ubiquitin speci... 35.8 0.033
mmu:53376 Usp2, B930035K21Rik, Ubp41; ubiquitin specific pepti... 35.8 0.035
hsa:27005 USP21, MGC3394, USP16, USP23; ubiquitin specific pep... 35.8 0.038
dre:100334088 ubiquitin specific peptidase 15-like 35.0 0.061
dre:564054 ubiquitin specific peptidase 2-like; K11833 ubiquit... 34.7 0.073
dre:100002673 ubiquitin specific peptidase 2-like; K11833 ubiq... 34.7 0.073
mmu:381944 Dub1a, DUB-1A; deubiquitinating enzyme 1a; K11845 u... 34.3 0.11
mmu:170822 Usp33, 9830169D19Rik, AA409780, Vdu1; ubiquitin spe... 33.9 0.12
xla:100158436 usp20; ubiquitin specific peptidase 20 (EC:3.4.1... 33.1 0.20
dre:100329380 ubiquitin specific peptidase 15-like 33.1 0.22
dre:393962 usp20, MGC63661, im:7151955, zgc:63661; ubiquitin s... 32.7 0.26
sce:YJL197W UBP12; Ubiquitin carboxyl-terminal hydrolase, ubiq... 32.3 0.34
hsa:23032 USP33, KIAA1097, MGC16868, VDU1; ubiquitin specific ... 32.3 0.36
ath:AT4G17895 UBP20; UBP20 (UBIQUITIN-SPECIFIC PROTEASE 20); u... 32.0 0.49
mmu:74270 Usp20, 1700055M05Rik, AI467231, Vdu2; ubiquitin spec... 32.0 0.49
dre:100149276 ubiquitin specific protease 43-like; K11856 ubiq... 32.0 0.50
xla:398480 usp4, MGC130831; ubiquitin specific peptidase 4 (pr... 31.6 0.59
cel:E01B7.1 hypothetical protein; K11839 ubiquitin carboxyl-te... 31.6 0.68
ath:AT5G46740 UBP21; UBP21 (UBIQUITIN-SPECIFIC PROTEASE 21); u... 31.6 0.72
hsa:10868 USP20, KIAA1003, LSFR3A, VDU2; ubiquitin specific pe... 31.6 0.72
mmu:384701 Dub2a, Dub4; deubiquitinating enzyme 2a; K11845 ubi... 31.2 0.82
hsa:377630 USP17L2, DUB3; ubiquitin specific peptidase 17-like... 31.2 0.88
cel:K09A9.4 hypothetical protein 30.8 1.1
dre:406508 usp33, zgc:77308; ubiquitin specific peptidase 33 (... 30.4 1.3
sce:YLR044C PDC1; Major of three pyruvate decarboxylase isozym... 30.0 1.9
hsa:124739 USP43, FLJ30626; ubiquitin specific peptidase 43 (E... 29.6 2.1
mmu:13531 Dub1; deubiquitinating enzyme 1 (EC:3.4.19.12); K118... 29.6 2.2
ath:AT5G11310 pentatricopeptide (PPR) repeat-containing protein 29.6 2.4
mmu:13532 Usp17l5, Dub2, Dub2b; ubiquitin specific peptidase 1... 29.6 2.5
ath:AT5G43990 SUVR2; SUVR2; histone-lysine N-methyltransferase... 29.3 3.0
cel:Y67D2.2 hypothetical protein; K11851 ubiquitin carboxyl-te... 29.3 3.1
ath:AT1G32850 UBP11; UBP11 (UBIQUITIN-SPECIFIC PROTEASE 11); c... 29.3 3.2
ath:AT5G22030 UBP8; UBP8 (UBIQUITIN-SPECIFIC PROTEASE 8); ubiq... 29.3 3.4
mmu:75083 Usp50, 1700086G18Rik, 4930511O11Rik; ubiquitin speci... 28.9 3.7
> tgo:TGME49_094360 ubiquitin carboxyl-terminal hydrolase, putative
(EC:4.1.1.70 3.1.2.15); K12847 U4/U6.U5 tri-snRNP-associated
protein 2
Length=571
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 59/72 (81%), Gaps = 0/72 (0%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLDE 60
QGKPHDG YK VLHAPTNEW E+EDLRVT VLPQFVALSE+Y+Q YQRQDV DGS+D
Sbjct 455 QGKPHDGQYKVHVLHAPTNEWFEIEDLRVTQVLPQFVALSESYVQVYQRQDVAPDGSIDR 514
Query 61 ALQQKCLQEMKK 72
+ + LQE++K
Sbjct 515 CVVEAALQELQK 526
> pfa:PF13_0096 Ubiquitin Carboxyl-terminal Hydrolase-like zinc
finger protein; K12847 U4/U6.U5 tri-snRNP-associated protein
2
Length=640
Score = 68.9 bits (167), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 0/57 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSL 58
G + G YK VL+ PTNEW+E+EDL V +LPQ V L E+ IQ YQRQDV +G +
Sbjct 584 GTVNQGSYKIHVLNQPTNEWYEIEDLHVISILPQLVLLPESCIQLYQRQDVKLNGDI 640
> tpv:TP02_0821 ubiquitin carboxyl-terminal hydrolase; K12847
U4/U6.U5 tri-snRNP-associated protein 2
Length=537
Score = 67.8 bits (164), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 0/51 (0%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQD 51
+GKP G +K V H P+ W +MEDL VT +LPQ VAL+E+Y+Q Y+RQD
Sbjct 474 EGKPTGGIFKVHVYHPPSGNWFQMEDLLVTSILPQQVALTESYVQVYKRQD 524
> dre:790924 usp39, wu:fb54d10, wu:fb79f05, zgc:158428; ubiquitin
specific peptidase 39; K12847 U4/U6.U5 tri-snRNP-associated
protein 2
Length=497
Score = 65.5 bits (158), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 0/50 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQD 51
GKP +G Y+ VLH T +W+E++DL+V +LPQ + LSEAYIQ ++RQD
Sbjct 437 GKPTEGSYRIHVLHHGTGKWYELQDLQVIDILPQMITLSEAYIQIWKRQD 486
> hsa:10713 USP39, HSPC332, MGC75069, SAD1, SNRNP65; ubiquitin
specific peptidase 39; K12847 U4/U6.U5 tri-snRNP-associated
protein 2
Length=565
Score = 65.5 bits (158), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 39/50 (78%), Gaps = 0/50 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQD 51
GKP +G Y+ VLH T +W+E++DL+VT +LPQ + LSEAYIQ ++R+D
Sbjct 507 GKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRD 556
> mmu:28035 Usp39, AA408960, AI894154, CGI-21, D6Wsu157e, SAD1;
ubiquitin specific peptidase 39; K12847 U4/U6.U5 tri-snRNP-associated
protein 2
Length=564
Score = 64.7 bits (156), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 39/50 (78%), Gaps = 0/50 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQD 51
GKP +G Y+ VLH T +W+E++DL+VT +LPQ + LSEAYIQ ++R+D
Sbjct 506 GKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRD 555
> bbo:BBOV_II005180 18.m06428; u4/u6.u5 tri-snRNP-associated 65
kDa protein; K12847 U4/U6.U5 tri-snRNP-associated protein
2
Length=470
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 0/40 (0%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALS 40
QG P G YK VLH PT +W+E+EDL VT VLPQFVA S
Sbjct 414 QGNPESGRYKIHVLHPPTGDWYELEDLLVTSVLPQFVAQS 453
> ath:AT4G22350 ubiquitin carboxyl-terminal hydrolase family protein;
K12847 U4/U6.U5 tri-snRNP-associated protein 2
Length=510
Score = 55.5 bits (132), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 0/50 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQD 51
GKP DG+++ V W+EM+DL V LPQ V LSEAY+Q Y++Q+
Sbjct 460 GKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQQE 509
> ath:AT4G22285 ubiquitin thiolesterase/ zinc ion binding
Length=541
Score = 54.3 bits (129), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 0/50 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQD 51
GKP DG+++ V W+EM+DL V LPQ V LSEAY+Q Y++++
Sbjct 491 GKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQEE 540
> cpv:cgd5_2350 SnRNP assembly defective 1 like ubiquitin C-terminal
hydrolase with a UBP finger at the N-terminus ; K12847
U4/U6.U5 tri-snRNP-associated protein 2
Length=498
Score = 52.0 bits (123), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 0/53 (0%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVM 53
+G G + Q+LH NEW E+ED+ V VLPQ + L+E YI Y+R D++
Sbjct 446 KGTIQSGKFLTQLLHPTRNEWIEIEDINVKVVLPQEILLNETYIIVYKRSDLI 498
> cel:F09D1.1 hypothetical protein; K12847 U4/U6.U5 tri-snRNP-associated
protein 2
Length=602
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFY-----QRQDVMAD 55
+G DG Y+ Q++H + +W E+EDL V +LPQ + L+E+YIQ + Q +D A+
Sbjct 537 EGTFKDGNYRIQIVHEGSGKWFELEDLHVKDLLPQMIVLAESYIQIWRLNKEQTRDERAE 596
Query 56 G 56
G
Sbjct 597 G 597
> hsa:8237 USP11, UHX1; ubiquitin specific peptidase 11 (EC:3.4.19.12);
K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15
[EC:3.1.2.15]
Length=963
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 0/51 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDV 52
G DG Y + + +WH +D V+PV + AY+ FYQRQDV
Sbjct 882 GGMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDV 932
> mmu:236733 Usp11, 6230415D12Rik, KIAA4085, MGC6649, mKIAA4085;
ubiquitin specific peptidase 11 (EC:3.4.19.12); K11835 ubiquitin
carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15]
Length=921
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 0/51 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDV 52
G DG Y + + +WH +D V+PV + AY+ FYQRQDV
Sbjct 841 GGMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDV 891
> dre:494031 usp2a, zgc:92134; ubiquitin specific peptidase 2a
(EC:3.1.2.15); K11833 ubiquitin carboxyl-terminal hydrolase
2/21 [EC:3.1.2.15]
Length=391
Score = 37.7 bits (86), Expect = 0.008, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 0/48 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQR 49
G G Y A + EW+ D RVTP+ V S+AY+ FY+R
Sbjct 341 GTTMGGHYTAYCCNPENGEWYTYNDSRVTPMSASQVRSSDAYVLFYER 388
> hsa:9099 USP2, UBP41, USP9; ubiquitin specific peptidase 2 (EC:3.4.19.12);
K11833 ubiquitin carboxyl-terminal hydrolase
2/21 [EC:3.1.2.15]
Length=605
Score = 36.2 bits (82), Expect = 0.028, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 0/47 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQ 48
G G Y A T EWH D VTP+ V S+AY+ FY+
Sbjct 551 GTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 597
> dre:564487 usp31; ubiquitin specific peptidase 31; K11852 ubiquitin
carboxyl-terminal hydrolase 31 [EC:3.1.2.15]
Length=1295
Score = 35.8 bits (81), Expect = 0.031, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 0/57 (0%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGS 57
G H G Y A ++ +W+ +D V PV + V AYI FYQR+ + S
Sbjct 687 HGNMHGGHYTAYCKNSIDGQWYCFDDSEVQPVADEDVCQQTAYILFYQRRTTIPSWS 743
> mmu:30941 Usp21, ESTM28, Usp16, Usp23, W53272; ubiquitin specific
peptidase 21 (EC:3.4.19.12); K11833 ubiquitin carboxyl-terminal
hydrolase 2/21 [EC:3.1.2.15]
Length=566
Score = 35.8 bits (81), Expect = 0.033, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQ 48
G H G Y A L WH D RV+PV VA SE Y+ FYQ
Sbjct 513 GSVHYGHYTA--LCRCQTGWHVYNDSRVSPVSENQVASSEGYVLFYQ 557
> mmu:53376 Usp2, B930035K21Rik, Ubp41; ubiquitin specific peptidase
2 (EC:3.4.19.12); K11833 ubiquitin carboxyl-terminal
hydrolase 2/21 [EC:3.1.2.15]
Length=619
Score = 35.8 bits (81), Expect = 0.035, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 0/47 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQ 48
G G Y A T EWH D VTP+ V S+AY+ FY+
Sbjct 565 GTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 611
> hsa:27005 USP21, MGC3394, USP16, USP23; ubiquitin specific peptidase
21 (EC:3.4.19.12); K11833 ubiquitin carboxyl-terminal
hydrolase 2/21 [EC:3.1.2.15]
Length=565
Score = 35.8 bits (81), Expect = 0.038, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQ 48
G H G Y A L WH D RV+PV VA SE Y+ FYQ
Sbjct 512 GSVHYGHYTA--LCRCQTGWHVYNDSRVSPVSENQVASSEGYVLFYQ 556
> dre:100334088 ubiquitin specific peptidase 15-like
Length=391
Score = 35.0 bits (79), Expect = 0.061, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 0/50 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQD 51
G DG Y + + +W+ +D +VT + + S AY+ FYQRQD
Sbjct 301 GGLRDGHYTSYARNKDNGQWYYFDDSKVTYAREEQIVTSAAYLLFYQRQD 350
> dre:564054 ubiquitin specific peptidase 2-like; K11833 ubiquitin
carboxyl-terminal hydrolase 2/21 [EC:3.1.2.15]
Length=398
Score = 34.7 bits (78), Expect = 0.073, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 0/42 (0%)
Query 7 GFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQ 48
G Y A T EW+ D RV+P+ V S+AY+ FY+
Sbjct 350 GHYTAYCRSPCTGEWYTYNDSRVSPMSSSQVCSSDAYVLFYE 391
> dre:100002673 ubiquitin specific peptidase 2-like; K11833 ubiquitin
carboxyl-terminal hydrolase 2/21 [EC:3.1.2.15]
Length=398
Score = 34.7 bits (78), Expect = 0.073, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 0/42 (0%)
Query 7 GFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQ 48
G Y A T EW+ D RV+P+ V S+AY+ FY+
Sbjct 350 GHYTAYCRSPCTGEWYTYNDSRVSPMSSSQVCSSDAYVLFYE 391
> mmu:381944 Dub1a, DUB-1A; deubiquitinating enzyme 1a; K11845
ubiquitin carboxyl-terminal hydrolase 17 [EC:3.1.2.15]
Length=468
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query 5 HDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLD 59
H G Y V A +W++M+D +VT V AY+ FY +Q+ + GS++
Sbjct 304 HSGHYFCCV-KAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQQNDLKKGSIN 357
> mmu:170822 Usp33, 9830169D19Rik, AA409780, Vdu1; ubiquitin specific
peptidase 33 (EC:3.4.19.12); K11848 ubiquitin carboxyl-terminal
hydrolase 20/33 [EC:3.1.2.15]
Length=897
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 0/48 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQR 49
G G Y A + N W+E +D VT V V +EAY+ FY++
Sbjct 626 GTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRK 673
> xla:100158436 usp20; ubiquitin specific peptidase 20 (EC:3.4.19.12);
K11848 ubiquitin carboxyl-terminal hydrolase 20/33
[EC:3.1.2.15]
Length=840
Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFY---------QRQD 51
G G Y + + +W+E +D VT V V +EAY+ FY +RQ
Sbjct 562 HGSASSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEEAERERQK 621
Query 52 VMADGSLDEA--LQQKCLQE-MKKVKTQAEP 79
V++ ++ E+ LQ +E + K T AEP
Sbjct 622 VVSLAAMKESGLLQFYISREWLNKFNTFAEP 652
> dre:100329380 ubiquitin specific peptidase 15-like
Length=317
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 0/45 (0%)
Query 9 YKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVM 53
Y A + +W+ +D V+P + + AY+ FYQRQD +
Sbjct 225 YTAYAKNVEDGQWYSFDDSSVSPASEEQIVSKAAYVLFYQRQDTV 269
> dre:393962 usp20, MGC63661, im:7151955, zgc:63661; ubiquitin
specific protease 20 (EC:3.1.2.15 3.4.19.12); K11848 ubiquitin
carboxyl-terminal hydrolase 20/33 [EC:3.1.2.15]
Length=913
Score = 32.7 bits (73), Expect = 0.26, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFY---------QRQD 51
G G Y A + +W+E +D VT V V +EAY+ FY +RQ
Sbjct 636 HGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEESVRERQR 695
Query 52 VMADGSLDEA--LQQKCLQE-MKKVKTQAEP 79
V+A +L E LQ +E + K T EP
Sbjct 696 VVALANLKEPSLLQFYISREWLNKFNTFTEP 726
> sce:YJL197W UBP12; Ubiquitin carboxyl-terminal hydrolase, ubiquitin-specific
protease present in the nucleus and cytoplasm
that cleaves ubiquitin from ubiquitinated proteins (EC:3.1.2.15);
K11835 ubiquitin carboxyl-terminal hydrolase 4/11/15
[EC:3.1.2.15]
Length=1254
Score = 32.3 bits (72), Expect = 0.34, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 0/56 (0%)
Query 9 YKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLDEALQQ 64
Y A V + N+W+ +D RVT P+ AY+ FY R+ +G LQ+
Sbjct 1069 YTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKDGNGLGSSKLQE 1124
> hsa:23032 USP33, KIAA1097, MGC16868, VDU1; ubiquitin specific
peptidase 33 (EC:3.4.19.12); K11848 ubiquitin carboxyl-terminal
hydrolase 20/33 [EC:3.1.2.15]
Length=942
Score = 32.3 bits (72), Expect = 0.36, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 12/91 (13%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGS--- 57
G G Y A + N W+E +D VT V V +EAY+ FY++ A
Sbjct 666 HGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRR 725
Query 58 -------LDEALQQKCL--QEMKKVKTQAEP 79
++ +L Q + Q + K KT AEP
Sbjct 726 ISNLLNIMEPSLLQFYISRQWLNKFKTFAEP 756
> ath:AT4G17895 UBP20; UBP20 (UBIQUITIN-SPECIFIC PROTEASE 20);
ubiquitin thiolesterase/ ubiquitin-specific protease
Length=695
Score = 32.0 bits (71), Expect = 0.49, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query 7 GFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLDEALQ 63
G Y + V AP WH +D +VT + V ++YI FY R+ S+ E +Q
Sbjct 434 GHYSSYVRSAP-KIWHHFDDSKVTRIDEDMVLSQDSYILFYAREGTRWFSSVYEEMQ 489
> mmu:74270 Usp20, 1700055M05Rik, AI467231, Vdu2; ubiquitin specific
peptidase 20 (EC:3.4.19.12); K11848 ubiquitin carboxyl-terminal
hydrolase 20/33 [EC:3.1.2.15]
Length=916
Score = 32.0 bits (71), Expect = 0.49, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLDE 60
G G Y A + +W+E +D VT V V EAY+ FY++ S +E
Sbjct 638 HGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNVEAYVLFYRK-------SSEE 690
Query 61 ALQQKCLQEMKKVKTQAEP 79
A++++ Q++ + EP
Sbjct 691 AMRER--QQVVSLAAMREP 707
> dre:100149276 ubiquitin specific protease 43-like; K11856 ubiquitin
carboxyl-terminal hydrolase 43 [EC:3.1.2.15]
Length=1163
Score = 32.0 bits (71), Expect = 0.50, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 0/49 (0%)
Query 9 YKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGS 57
Y A ++ +W+ +D V P+ V AYI FYQR+D + S
Sbjct 701 YTAYCRNSVDGQWYTYDDSSVEPLQEGEVCTRAAYILFYQRRDAIPSWS 749
> xla:398480 usp4, MGC130831; ubiquitin specific peptidase 4 (proto-oncogene);
K11835 ubiquitin carboxyl-terminal hydrolase
4/11/15 [EC:3.1.2.15]
Length=975
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 0/43 (0%)
Query 9 YKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQD 51
Y A + ++W+ +D V+P + AY+ FYQRQD
Sbjct 899 YTAYAKNQDKDQWYYFDDSSVSPASEDQIVTKAAYVLFYQRQD 941
> cel:E01B7.1 hypothetical protein; K11839 ubiquitin carboxyl-terminal
hydrolase 8 [EC:3.1.2.15]
Length=811
Score = 31.6 bits (70), Expect = 0.68, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 0/48 (0%)
Query 2 GKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQR 49
G+ + G Y A H +++W +D VTP V S AYI FY+R
Sbjct 763 GRLNSGHYTAVASHLRSDKWLRFDDSVVTPCENFKVDPSLAYILFYKR 810
> ath:AT5G46740 UBP21; UBP21 (UBIQUITIN-SPECIFIC PROTEASE 21);
ubiquitin thiolesterase/ ubiquitin-specific protease
Length=732
Score = 31.6 bits (70), Expect = 0.72, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query 7 GFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQ 50
G Y + V AP WH +D +VT + + V AYI FY R+
Sbjct 427 GHYSSYVRSAPET-WHNFDDSKVTRISEERVLSRPAYILFYARE 469
> hsa:10868 USP20, KIAA1003, LSFR3A, VDU2; ubiquitin specific
peptidase 20 (EC:3.4.19.12); K11848 ubiquitin carboxyl-terminal
hydrolase 20/33 [EC:3.1.2.15]
Length=914
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLDE 60
G G Y A + +W+E +D VT V V +E Y+ FY++ S +E
Sbjct 636 HGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLFYRK-------SSEE 688
Query 61 ALQQKCLQEMKKVKTQAEPE 80
A++++ Q++ + EP
Sbjct 689 AMRER--QQVVSLAAMREPS 706
> mmu:384701 Dub2a, Dub4; deubiquitinating enzyme 2a; K11845 ubiquitin
carboxyl-terminal hydrolase 17 [EC:3.1.2.15]
Length=545
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query 5 HDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLD 59
H G Y + V A +W++M+D +VT V AY+ FY +Q + + S+D
Sbjct 304 HSGHYFSYV-KAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQQTDLKEVSID 357
> hsa:377630 USP17L2, DUB3; ubiquitin specific peptidase 17-like
2 (EC:3.4.19.12); K11845 ubiquitin carboxyl-terminal hydrolase
17 [EC:3.1.2.15]
Length=530
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query 5 HDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFY 47
HDG Y + V A +W++M+D +VT V +AY+ FY
Sbjct 331 HDGHYFSYV-KAQEGQWYKMDDAKVTACSITSVLSQQAYVLFY 372
> cel:K09A9.4 hypothetical protein
Length=716
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 0/54 (0%)
Query 7 GFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLDE 60
G Y + H N+W++ +D+ VT VA S+ YI Y++ + S+ +
Sbjct 505 GHYVSYCRHEQDNQWYKFDDMVVTRCDATQVAKSQPYILMYRKHTTNGEPSISQ 558
> dre:406508 usp33, zgc:77308; ubiquitin specific peptidase 33
(EC:3.4.19.12); K11848 ubiquitin carboxyl-terminal hydrolase
20/33 [EC:3.1.2.15]
Length=897
Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 0/51 (0%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQD 51
G G Y A + W+E +D VT V V +EAY+ FY++ +
Sbjct 621 HGTASSGHYIAYCRNELNQLWYEFDDQSVTEVSESCVQNAEAYVLFYKKSN 671
> sce:YLR044C PDC1; Major of three pyruvate decarboxylase isozymes,
key enzyme in alcoholic fermentation, decarboxylates pyruvate
to acetaldehyde; subject to glucose-, ethanol-, and
autoregulation; involved in amino acid catabolism (EC:4.1.1.74
4.1.1.72 4.1.1.1 4.1.1.-); K01568 pyruvate decarboxylase
[EC:4.1.1.1]
Length=563
Score = 30.0 bits (66), Expect = 1.9, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query 5 HDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLDEALQQ 64
+DG+ +++H P +++E++ +LP F A + Y+ V G D+ Q
Sbjct 471 NDGYTIEKLIHGPKAQYNEIQGWDHLSLLPTFGA------KDYETHRVATTGEWDKLTQD 524
Query 65 KCLQEMKKVK 74
K + K++
Sbjct 525 KSFNDNSKIR 534
> hsa:124739 USP43, FLJ30626; ubiquitin specific peptidase 43
(EC:3.4.19.12); K11856 ubiquitin carboxyl-terminal hydrolase
43 [EC:3.1.2.15]
Length=1123
Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 0/51 (0%)
Query 1 QGKPHDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQD 51
G G Y A ++ +W+ +D V P+ V AYI FYQ+++
Sbjct 661 HGNLQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 711
> mmu:13531 Dub1; deubiquitinating enzyme 1 (EC:3.4.19.12); K11845
ubiquitin carboxyl-terminal hydrolase 17 [EC:3.1.2.15]
Length=526
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query 5 HDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLD 59
H G Y V A +W++M+D +VT V AY+ FY +Q + S+D
Sbjct 304 HSGHYFCCV-KAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQANLKQVSID 357
> ath:AT5G11310 pentatricopeptide (PPR) repeat-containing protein
Length=602
Score = 29.6 bits (65), Expect = 2.4, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query 6 DGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLDEALQQK 65
+G+++++ L W EM+ + V P + + L E Y + + Q M E L++
Sbjct 258 NGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAM------EVLEEM 311
Query 66 CLQEMK 71
+ EM+
Sbjct 312 KMAEME 317
> mmu:13532 Usp17l5, Dub2, Dub2b; ubiquitin specific peptidase
17-like 5; K11845 ubiquitin carboxyl-terminal hydrolase 17
[EC:3.1.2.15]
Length=545
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query 5 HDGFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQDVMADGSLD 59
H G Y + V A W++M+D +VT V AY+ FY +Q + S+D
Sbjct 304 HSGHYFSYV-KARHGAWYKMDDTKVTSCDVTSVLNENAYVLFYVQQTDLKQVSID 357
> ath:AT5G43990 SUVR2; SUVR2; histone-lysine N-methyltransferase/
zinc ion binding
Length=717
Score = 29.3 bits (64), Expect = 3.0, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query 24 MEDLRVTPVLPQFVALSEAYIQFYQRQD--VMADGSLDEALQQKCLQEMKKVKTQAEPED 81
+ED RV PVL +AL E + + V+AD D + + + +QE ++ K ED
Sbjct 19 IEDARVKPVLKNLLALYEKNWELIAEDNYRVLADAIFD-SHEDQAIQESEEKKADEVKED 77
Query 82 E 82
E
Sbjct 78 E 78
> cel:Y67D2.2 hypothetical protein; K11851 ubiquitin carboxyl-terminal
hydrolase 30 [EC:3.1.2.15]
Length=474
Score = 29.3 bits (64), Expect = 3.1, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query 1 QGKPHDG-FYKAQVLHAPTNE-WHEMEDLRVTPVLPQFVALSEAYIQFYQR 49
+G P+ G F + AP + W+ D +VT V VA ++Y+ FY+R
Sbjct 414 RGGPYSGHFVTYRRASAPNHHTWYYTSDAQVTRVPYSHVAACQSYMLFYER 464
> ath:AT1G32850 UBP11; UBP11 (UBIQUITIN-SPECIFIC PROTEASE 11);
cysteine-type endopeptidase/ ubiquitin thiolesterase; K11835
ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15]
Length=892
Score = 29.3 bits (64), Expect = 3.2, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
Query 20 EWHEMEDLRVTPVLPQFVALSEAYIQFYQR 49
+W+ +D RV+ V + S AY+ FYQR
Sbjct 850 KWYNFDDSRVSAVNESEIKTSAAYVLFYQR 879
> ath:AT5G22030 UBP8; UBP8 (UBIQUITIN-SPECIFIC PROTEASE 8); ubiquitin
thiolesterase/ ubiquitin-specific protease; K11835 ubiquitin
carboxyl-terminal hydrolase 4/11/15 [EC:3.1.2.15]
Length=913
Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query 7 GFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQR 49
G Y A V H + W++ +D V + + + S AY+ FY+R
Sbjct 869 GHYTAYVHHG-GDRWYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
> mmu:75083 Usp50, 1700086G18Rik, 4930511O11Rik; ubiquitin specific
peptidase 50 (EC:3.4.19.12)
Length=390
Score = 28.9 bits (63), Expect = 3.7, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 0/44 (0%)
Query 7 GFYKAQVLHAPTNEWHEMEDLRVTPVLPQFVALSEAYIQFYQRQ 50
G Y A ++ T W+ +D RV+ + V + AY+ FY Q
Sbjct 320 GHYTAFCKNSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFYSCQ 363
Lambda K H
0.316 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2017039696
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40