bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_3782_orf1
Length=198
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_042620 hypothetical protein ; K14572 midasin 157 3e-38
cpv:cgd5_3110 MDN1, midasin ; K14572 midasin 111 1e-24
ath:AT1G67120 ATP binding / ATPase/ nucleoside-triphosphatase/... 110 4e-24
hsa:23195 MDN1, DKFZp686H16106, FLJ23395, FLJ25587, FLJ42031, ... 106 4e-23
pfa:PF14_0326 dynein-related AAA-type ATPase; K14572 midasin 105 9e-23
mmu:100019 Mdn1, 4833432B22Rik, A130070M06, AA958993, D4Abb1e,... 104 2e-22
sce:YLR106C MDN1, REA1; Huge dynein-related AAA-type ATPase (m... 102 1e-21
bbo:BBOV_III002250 17.m07217; ATPase associated with various c... 100 3e-21
cel:F55F10.1 hypothetical protein; K14572 midasin 96.7 4e-20
tpv:TP03_0591 hypothetical protein; K14572 midasin 74.7 2e-13
bbo:BBOV_III007160 17.m07628; hypothetical protein; K11269 chr... 41.2 0.002
tpv:TP04_0632 replication factor C 40.8 0.003
mmu:19687 Rfc1, 140kDa, Alp145, MGC96526, RFC140, Recc1; repli... 38.9 0.013
cpv:cgd8_610 DNA replication repC1, AAA+ ATpase with a BRCT do... 37.7 0.025
hsa:5981 RFC1, A1, MGC51786, MHCBFB, PO-GA, RECC1, RFC, RFC140... 37.7 0.028
pfa:PF14_0548 ATPase, putative; K12196 vacuolar protein-sortin... 37.4 0.033
dre:554366 chtf18, MGC113153, MGC192547, zgc:113153; CTF18, ch... 37.0 0.041
ath:AT5G08470 PEX1; PEX1 (peroxisome 1); ATP binding / ATPase/... 37.0 0.046
mmu:71382 Pex1, 5430414H02Rik, E330005K07Rik, MGC102188, ZWS1;... 36.6 0.050
bbo:BBOV_III006020 17.m07531; ATP-dependent protease La family... 36.6 0.051
mmu:23924 Katna1; katanin p60 (ATPase-containing) subunit A1 (... 36.6 0.059
mmu:74142 Lonp1, 1200017E13Rik, LON, Prss15; lon peptidase 1, ... 36.6 0.061
hsa:11104 KATNA1; katanin p60 (ATPase containing) subunit A 1 ... 36.6 0.064
ath:AT1G80350 ERH3; ERH3 (ECTOPIC ROOT HAIR 3); ATP binding / ... 36.6 0.065
cel:K04D7.2 mspn-1; Mitochondrial Sorting of Proteins (yeast M... 36.2 0.072
tgo:TGME49_070900 ATPase, AAA family domain-containing protein... 36.2 0.080
eco:b0882 clpA, ECK0873, JW0866, lopD; ATPase and specificity ... 35.8 0.10
dre:492790 katnal1, zgc:101696; katanin p60 subunit A-like 1 (... 35.4 0.12
xla:414577 chtf18, MGC81266; CTF18, chromosome transmission fi... 35.4 0.12
xla:399380 katna1; katanin p60 (ATPase containing) subunit A 1... 35.4 0.13
cel:F11C1.5 hypothetical protein 35.4 0.13
dre:553631 katna1, MGC110580, si:dkey-15j16.1, zgc:110580; kat... 35.4 0.14
mmu:231912 Katnal1, MGC40859; katanin p60 subunit A-like 1 (EC... 35.0 0.16
hsa:84056 KATNAL1, MGC2599; katanin p60 subunit A-like 1 (EC:3... 35.0 0.17
hsa:63922 CHTF18, C16orf41, C321D2.2, C321D2.3, C321D2.4, CHL1... 34.7 0.19
ath:AT5G22010 AtRFC1; AtRFC1 (replication factor C 1); ATP bin... 34.7 0.24
tgo:TGME49_108580 lon protease, putative (EC:3.4.21.53); K0867... 34.3 0.27
ath:AT3G05780 LON3; LON3 (LON PROTEASE 3); ATP binding / ATP-d... 34.3 0.28
ath:AT1G04730 AAA-type ATPase family protein; K11269 chromosom... 34.3 0.28
sce:YDR394W RPT3, YNT1, YTA2; One of six ATPases of the 19S re... 33.9 0.35
ath:AT4G23940 FtsH protease, putative 33.9 0.35
ath:AT5G26860 LON1; LON1 (LON PROTEASE 1); ATP binding / ATP-d... 33.9 0.42
hsa:9361 LONP1, LON, LONP, LonHS, MGC1498, PIM1, PRSS15, hLON;... 33.9 0.42
dre:767670 vps4a, MGC153907, zgc:153907; vacuolar protein sort... 33.5 0.43
tpv:TP02_0361 ATP-dependent protease; K01362 [EC:3.4.21.-] 33.5 0.44
tgo:TGME49_061020 axonemal dynein heavy chain, putative (EC:2.... 33.5 0.46
ath:AT1G02890 AAA-type ATPase family protein 33.5 0.48
cpv:cgd7_4690 RF-C paralog (Ctf18p) AAA+ ATpase ; K11269 chrom... 33.5 0.49
ath:AT5G47040 LON2; LON2 (LON PROTEASE 2); ATP binding / ATP-d... 33.5 0.50
dre:563257 lonp1, fc64d11, prss15, wu:fc64d11; lon peptidase 1... 33.5 0.51
> tgo:TGME49_042620 hypothetical protein ; K14572 midasin
Length=3661
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 101/155 (65%), Gaps = 24/155 (15%)
Query 51 SSSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAE---- 106
S +GRHAVLLEGPPGAGKTF +G+LA LCGRRLVR+N+SED+EL+DL+G VP
Sbjct 3133 SPTGRHAVLLEGPPGAGKTFALGMLAALCGRRLVRMNMSEDSELSDLIGMFVPGGSEEEE 3192
Query 107 ---------VEESCGS----------EGSAEA-ATQRQKKPPFVWTDGVLTRNLRAGNWI 146
V +S + EG E+ TQ F W DG+LTR +R+G+WI
Sbjct 3193 QEEPTEPAEVGDSAPNLVPGKKDPFREGGTESEGTQTDSSSRFRWVDGILTRAVRSGDWI 3252
Query 147 LLDELNLAPQQTLEGLNPLLDHRRCVYLPTPEDPL 181
LLDE+NLA Q TLEGLN LLDHRRC++LP PL
Sbjct 3253 LLDEINLASQATLEGLNSLLDHRRCLFLPCSPVPL 3287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 20/124 (16%)
Query 52 SSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESC 111
S R A+LLEGP AGKT VV LA+L G +RIN E T++ + G V C
Sbjct 1842 SGSRSALLLEGPTSAGKTTVVSFLAKLTGHAFLRINNHEHTDVQEYTGQYV--------C 1893
Query 112 GSEGSAEAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRC 171
G +G V+ +G L + R G+W+++DELNLAP + LEGLN LLD R
Sbjct 1894 GEKGD------------IVFEEGPLVKAAREGSWVVIDELNLAPSEVLEGLNRLLDDNRE 1941
Query 172 VYLP 175
+++P
Sbjct 1942 LFIP 1945
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 0/39 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLD 167
F +G+L +R G W+LLDE+NLAP L+ L +LD
Sbjct 1521 FSLREGLLVDAIRTGKWLLLDEINLAPADVLQRLLGILD 1559
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 0/46 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVP 103
+LL G G GKT +V + L G LV N SE +E ADL+G+ P
Sbjct 1219 LLLVGDTGCGKTALVSYVGALTGHELVVYNFSEQSEAADLIGSWRP 1264
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 0/46 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYL 174
F W DG + ++ G LLDE++LA LE LN LL+ R + L
Sbjct 2601 FEWEDGPIITAMKQGQMFLLDEISLAQDAVLERLNCLLEDSREIVL 2646
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 18/98 (18%)
Query 4 PNEEELPEVVKSPSVRKSLGRLLRCLLLIQQQQQQQCKLASGLGGLGSSSGRHAVLLEGP 63
P LP +V + + R+ + RL RC + Q Q + R A+L+ GP
Sbjct 710 PTTTFLP-LVSTATARQLVDRL-RCCCVAGQDAQGR--------------SRPAILIHGP 753
Query 64 PGAGKTFVVGLLARLCGRRL--VRINLSEDTELADLLG 99
G+GKT ++ +A + G+ V L + T+ L+G
Sbjct 754 SGSGKTSLIRWVADIVGQEQPPVSFFLDDQTDAKTLIG 791
> cpv:cgd5_3110 MDN1, midasin ; K14572 midasin
Length=2893
Score = 111 bits (278), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/120 (44%), Positives = 79/120 (65%), Gaps = 2/120 (1%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
+LLEG PG GKT ++ L++L G +L RIN+SE T+ +DL G VP++ V +
Sbjct 2372 ILLEGAPGIGKTAIILTLSKLVGVKLHRINMSEQTDFSDLFGCEVPNSGVSRNKDQNQHQ 2431
Query 118 EAATQRQKKPPFV--WTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLP 175
+ Q +K+ + W DG+L ++ G+W++LDELNLA QQ LEGLN ++DHRR +Y+P
Sbjct 2432 DDDYQMRKQDGKLINWIDGILLYAMKNGDWVILDELNLATQQILEGLNSVMDHRRNIYIP 2491
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 42/165 (25%)
Query 11 EVVKSPSVRKSLGRLLRCLLLIQQQQQQQCKLASGLGGLGSSSGRHAVLLEGPPGAGKTF 70
E V +P V ++L ++LR L S R+ +L+EG GKT
Sbjct 1360 EFVITPYVEQNLMKILRIL----------------------SGSRNPILIEGETSTGKTS 1397
Query 71 VVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSAEAATQRQKKPPFV 130
++ ++ L + VRIN E T+ + G +P+ ++G E
Sbjct 1398 LIKYISELTNHKFVRINNHEHTDTEEYFGKFIPN--------NQGELE------------ 1437
Query 131 WTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLP 175
+ +G L ++R G W++LDELNLAP + LE LN LLD R +++P
Sbjct 1438 FVEGPLVNSIRNGYWLVLDELNLAPSEVLESLNRLLDSNREIFIP 1482
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query 123 RQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLPTPEDPLS 182
++ + F W DG + + ++ G+++LLDE+NL +E LN LL+ + ++ T E LS
Sbjct 1903 KKDQALFEWQDGPIIKAMKTGSFLLLDEINLCDDSVIERLNSLLEDQ---FIKT-ESGLS 1958
Query 183 TKNR 186
K+R
Sbjct 1959 YKSR 1962
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query 119 AATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLL---DHR 169
+ +RQK F + DG+L + ++ G+W++LDE+NLA L+ L P+L +HR
Sbjct 977 SENERQKHY-FEFLDGILLKAIKEGHWLILDEINLASIDILQRLIPILNRGNHR 1029
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 0/46 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVP 103
V+L G G GKT + LL+ L ++L +N + E +D+LG++ P
Sbjct 1736 VILVGSTGCGKTSIFQLLSTLYKKQLYIVNCHQQIEASDMLGSLRP 1781
> ath:AT1G67120 ATP binding / ATPase/ nucleoside-triphosphatase/
nucleotide binding / transcription factor binding; K14572
midasin
Length=5336
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 74/118 (62%), Gaps = 17/118 (14%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
+LLEG PG GKT ++ L + G ++VRINLSE T++ DLLG+ +P
Sbjct 1748 ILLEGSPGVGKTSLILALGKYSGHKVVRINLSEQTDMMDLLGSDLP-------------- 1793
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLP 175
+ + F W+DG+L + L+ G+W+LLDELNLAPQ LEGLN +LDHR V++P
Sbjct 1794 ---VESDEDMKFAWSDGILLQALKEGSWVLLDELNLAPQSVLEGLNAILDHRAQVFIP 1848
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 20/128 (15%)
Query 55 RHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSE 114
R+ VLL+GP +GKT +V LA + G + VRIN E T++ + LG+ + +S G
Sbjct 1072 RYPVLLQGPTSSGKTSLVKYLAAISGNKFVRINNHEQTDIQEYLGSYMT-----DSSGK- 1125
Query 115 GSAEAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYL 174
V+ +G L + +R G+WI+LDELNLAP LE LN LLD R +++
Sbjct 1126 --------------LVFHEGALVKAVRGGHWIVLDELNLAPSDVLEALNRLLDDNRELFV 1171
Query 175 PTPEDPLS 182
P + +S
Sbjct 1172 PELSETIS 1179
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 67/177 (37%), Gaps = 64/177 (36%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG------------------ 99
VLL G G GKT + +L+ + +RL +N + TE +D LG
Sbjct 1331 VLLVGDTGGGKTTICQILSDVKKKRLHILNCHQYTETSDFLGGFFPVRDRSKLITEYENQ 1390
Query 100 --------AVVPSAEVEESCG-------SEGSAEAATQRQK------------------- 125
A+ P + CG S S E A ++ K
Sbjct 1391 VKQLELSQALTPFGQDIVICGDISRAEVSIKSVEVALEKYKNGSVIGVAATPQDVDFLEK 1450
Query 126 ------------KPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRR 170
+ FVW DG L +RAGN +L+DE++LA LE +N +L+ R
Sbjct 1451 IRNNMVMLYQKWRAIFVWQDGPLVEAMRAGNIVLVDEISLADDSVLERMNSVLETDR 1507
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query 53 SGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCG 112
S + VLL GP G+GK+ ++ LA G +V I++ + + L+G V + + E
Sbjct 351 SQKRPVLLYGPSGSGKSALIRKLADESGNHVVFIHMDDQLDGKTLVGTYVCTDQPGE--- 407
Query 113 SEGSAEAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLL 166
F W G LT+ + G W++L++++ AP L+ LL
Sbjct 408 ----------------FRWQPGSLTQAIMNGFWVVLEDIDKAPSDVPLVLSSLL 445
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 0/46 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVP 103
VLL G G GKT +V LA G++L +NLS+ +++ DLLG P
Sbjct 670 VLLVGETGTGKTTLVQNLAHWIGQKLTVLNLSQQSDIVDLLGGFKP 715
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 0/41 (0%)
Query 59 LLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG 99
+L GP +GKT V+ +LA+L G L +NLS T+ +DLLG
Sbjct 2058 ILVGPSSSGKTSVIRILAQLTGYPLNELNLSSATDSSDLLG 2098
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 0/31 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTL 159
F + +G LR G+W+LLDE+NLAP + L
Sbjct 825 FTFVEGAFVTALREGHWVLLDEVNLAPPEIL 855
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 0/46 (0%)
Query 122 QRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLD 167
++++ F W G+L + + G W++L NL L+ +N L++
Sbjct 2213 EKKQSTKFEWVTGMLIKAIEKGEWVVLKNANLCNPTVLDRINSLVE 2258
> hsa:23195 MDN1, DKFZp686H16106, FLJ23395, FLJ25587, FLJ42031,
FLJ43191, KIAA0301; MDN1, midasin homolog (yeast); K14572
midasin
Length=5596
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 71/118 (60%), Gaps = 17/118 (14%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
+LLEG PG GKT +VG LA+ G LVRINLSE T++ DL GA +P VE G E
Sbjct 1749 ILLEGSPGVGKTSLVGALAKASGNTLVRINLSEQTDITDLFGADLP---VEGGKGGE--- 1802
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLP 175
F W DG L L+AG+W++LDELNLA Q LEGLN DHR +Y+P
Sbjct 1803 -----------FAWRDGPLLAALKAGHWVVLDELNLASQSVLEGLNACFDHRGEIYVP 1849
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 20/119 (16%)
Query 52 SSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESC 111
S+G + VL++G GKT ++ LA G VRIN E T++ + +G C
Sbjct 1074 SAGTYPVLIQGETSVGKTSLIQWLAAATGNHCVRINNHEHTDIQEYIG-----------C 1122
Query 112 GSEGSAEAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRR 170
+ S+ V+ +GVL +R G WI+LDELNLAP LE LN LLD R
Sbjct 1123 YTSDSS---------GKLVFKEGVLIDAMRKGYWIILDELNLAPTDVLEALNRLLDDNR 1172
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 27/122 (22%)
Query 53 SGRHAVLLEGPPGAGKTFVVGLLARLCGR----RLVRINLSEDTELADLLGAVVPSAEVE 108
+ ++AVLLEGP G GKT +V LA + GR +L+++ L + T+ LLG
Sbjct 320 ASQNAVLLEGPIGCGKTSLVEYLAAVTGRTKPPQLLKVQLGDQTDSKMLLGMY------- 372
Query 109 ESCGSEGSAEAATQRQKKPP--FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLL 166
R P FVW G LT+ G+WILL++++ AP + L PLL
Sbjct 373 --------------RCTDVPGEFVWQPGTLTQAATMGHWILLEDIDYAPLDVVSVLIPLL 418
Query 167 DH 168
++
Sbjct 419 EN 420
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 12/125 (9%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
VLL G G GKT + + A L ++L ++ E +D LG + P +
Sbjct 1386 VLLVGDTGCGKTTICQVFAALANQKLYSVSCHLHMETSDFLGGLRPVRQ-----KPNDKE 1440
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLP-- 175
E T R F W DG L + ++ + LLDE++LA LE LN +L+ + + L
Sbjct 1441 EIDTSRL----FEWHDGPLVQAMKEDGFFLLDEISLADDSVLERLNSVLEVEKSLVLAEK 1496
Query 176 -TPED 179
+PED
Sbjct 1497 GSPED 1501
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 0/46 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVP 103
VLL G G GKT + LA + G RL +N+++ ++ ADLLG P
Sbjct 673 VLLVGETGTGKTSTIQYLAHITGHRLRVVNMNQQSDTADLLGGYKP 718
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 0/39 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLD 167
F + +G L + ++ G WILLDE+NLA + LE L+ LL+
Sbjct 816 FAFVEGTLAQAVKKGEWILLDEINLAAPEILECLSGLLE 854
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 0/39 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLD 167
F W D +L + L++G+W+L+D +N L+ LN LL+
Sbjct 2222 FEWVDSMLVQALKSGDWLLMDNVNFCNPSVLDRLNALLE 2260
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 0/44 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAV 101
V+L GP GKT +V LLA L G L + ++ + +LLG
Sbjct 2062 VILVGPASVGKTSLVQLLAHLTGHTLKIMAMNSAMDTTELLGGF 2105
> pfa:PF14_0326 dynein-related AAA-type ATPase; K14572 midasin
Length=8105
Score = 105 bits (263), Expect = 9e-23, Method: Composition-based stats.
Identities = 52/137 (37%), Positives = 80/137 (58%), Gaps = 17/137 (12%)
Query 56 HAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAE----VEESC 111
+A+LLEG PG GKT ++ +LA++ +L+RINLSE T++ D +G+ P E E+
Sbjct 2491 NAILLEGSPGVGKTCIIDILAKITNNKLIRINLSECTDIYDFIGSYFPIKEKNKKTHETL 2550
Query 112 GSEGSAEAAT-------------QRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQT 158
+ + ++ K + W DG L ++ G WIL+DE+NLA QQT
Sbjct 2551 NGDNKNDTCDDNLYNNNVDNIFDKKNKSFQYAWEDGKLIDCMKKGYWILIDEINLANQQT 2610
Query 159 LEGLNPLLDHRRCVYLP 175
LEGLN +LDHR+ +++P
Sbjct 2611 LEGLNSILDHRKEIFIP 2627
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 24/155 (15%)
Query 21 SLGRLLRCLLLIQQQQQQQCKLASGLGGLGSSSGRHAVLLEGPPGAGKTFVVGLLARLCG 80
+L R+L ++ + + KLA L +S + +LLEG GKT +V A + G
Sbjct 1581 NLKRILSNFIITKNVKDNIKKLALCL-----TSIKTPILLEGNTSVGKTSLVKFFADITG 1635
Query 81 RRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSAEAATQRQKKPPFVWTDGVLTRNL 140
+ +RIN +T++ + G V +K ++ +GV + +
Sbjct 1636 HKFIRINNHMNTDINEYFGQFV-------------------NDKKSGNLIFEEGVFVKAV 1676
Query 141 RAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLP 175
+ G+W++LDELNLAP + LE LN +LD + +Y+P
Sbjct 1677 KYGHWVVLDELNLAPSEVLESLNRILDDNKELYIP 1711
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 126 KPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYL 174
K F W DG+L +L+ G+ L+DE++L +E LN +L++ R + L
Sbjct 2099 KSLFTWYDGILVSSLKKGHIFLMDEISLVESSVIERLNSVLEYERTLLL 2147
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 0/39 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLD 167
F + DG+L ++ G+WILLDE+NLA + L+ L LLD
Sbjct 1172 FKFHDGILIDCIKNGHWILLDEINLAQTEILQRLQGLLD 1210
Score = 32.3 bits (72), Expect = 1.00, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 0/49 (0%)
Query 55 RHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVP 103
+ +LL G G GKT ++ +A++ ++L SE E +DL+G P
Sbjct 953 KEPILLIGDTGVGKTALIDYVAKIFQKKLYVFVFSEMAEASDLIGNYYP 1001
> mmu:100019 Mdn1, 4833432B22Rik, A130070M06, AA958993, D4Abb1e,
Gm135; midasin homolog (yeast); K14572 midasin
Length=5582
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 70/118 (59%), Gaps = 17/118 (14%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
+LLEG PG GKT +V LA+ G LVRINLSE T++ DL GA +P VE G E
Sbjct 1744 ILLEGSPGVGKTSLVAALAKASGNTLVRINLSEQTDITDLFGADLP---VEGGRGGE--- 1797
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLP 175
F W DG L L+AG+W++LDELNLA Q LEGLN DHR +Y+P
Sbjct 1798 -----------FAWCDGPLLAALKAGHWVVLDELNLASQSILEGLNACFDHRGEIYVP 1844
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 20/119 (16%)
Query 52 SSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESC 111
S+G + VL++G GKT ++ LA G VRIN E T++ + +G
Sbjct 1070 SAGTYPVLIQGETSVGKTSLIRWLAAASGNHCVRINNHEHTDIQEYIGCYT--------- 1120
Query 112 GSEGSAEAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRR 170
S+ S + V+ +GVL +R G WI+LDELNLAP LE LN LLD R
Sbjct 1121 -SDTSGK----------LVFNEGVLIDAMRKGYWIVLDELNLAPTDVLEALNRLLDDNR 1168
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 27/124 (21%)
Query 51 SSSGRHAVLLEGPPGAGKTFVVGLLARLCGR----RLVRINLSEDTELADLLGAVVPSAE 106
S + ++AVLLEGP G+GKT +V LA + GR +L+++ L + T+ LLG
Sbjct 318 SVASQNAVLLEGPIGSGKTSLVEHLAAVTGRTKPPQLLKVQLGDQTDSKMLLGMY----- 372
Query 107 VEESCGSEGSAEAATQRQKKPP--FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNP 164
R P FVW G LT+ G WILL++++ AP + L P
Sbjct 373 ----------------RCTDVPGEFVWQPGTLTQAATKGYWILLEDIDYAPLDVVSVLIP 416
Query 165 LLDH 168
LL+H
Sbjct 417 LLEH 420
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
VLL G G GKT V + + L ++L +N + E +D LG + P V + +
Sbjct 1382 VLLVGDTGCGKTTVCQMFSALANQKLYSVNCHLNMETSDFLGGLRP---VRQKPNDKDEL 1438
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLPTP 177
+ F W DG L ++ ++ LLDE++LA LE LN +L+ +C+ L
Sbjct 1439 DTRL-------FEWHDGPLVLAMKEDSFFLLDEISLADDSVLERLNSVLEVEKCLVLAEK 1491
Query 178 EDPLSTKN 185
P S N
Sbjct 1492 GSPESKDN 1499
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 0/39 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLD 167
F + +G L + ++ G WILLDE+NLA +TLE L+ LL+
Sbjct 812 FAFVEGTLAQAIKKGEWILLDEINLAAPETLECLSGLLE 850
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 0/39 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLD 167
F W D +L + L++G+W+L+D +N L+ LN LL+
Sbjct 2217 FEWVDSMLVQALKSGDWLLMDNVNFCNPSVLDRLNALLE 2255
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 0/46 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVP 103
VLL G G GKT V LA G+ L +N+++ ++ ADLLG P
Sbjct 670 VLLVGETGTGKTSAVQYLAYATGQHLRVVNMNQQSDTADLLGGFKP 715
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 0/44 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAV 101
V+L GP GKT +V LLA L G L + ++ + +LLG
Sbjct 2057 VILVGPASVGKTSLVQLLAHLTGHTLKIMAMNSAMDTTELLGGF 2100
> sce:YLR106C MDN1, REA1; Huge dynein-related AAA-type ATPase
(midasin), forms extended pre-60S particle with the Rix1 complex
(Rix1p-Ipi1p-Ipi3p), may mediate ATP-dependent remodeling
of 60S subunits and subsequent export from nucleoplasm to
cytoplasm; K14572 midasin
Length=4910
Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/118 (45%), Positives = 66/118 (55%), Gaps = 19/118 (16%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
+LLEG PG GKT ++ LA + G +L RINLSE T+L DL GA P E S
Sbjct 1743 ILLEGSPGVGKTSLITALANITGNKLTRINLSEQTDLVDLFGADAPG---------ERSG 1793
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLP 175
E F+W D R ++ G W+LLDE+NLA Q LEGLN LDHR Y+P
Sbjct 1794 E----------FLWHDAPFLRAMKKGEWVLLDEMNLASQSVLEGLNACLDHRGEAYIP 1841
Score = 82.8 bits (203), Expect = 6e-16, Method: Composition-based stats.
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 20/130 (15%)
Query 50 GSSSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEE 109
+S R VL++GP +GKT ++ LA + G + VRIN E T+L + LG V
Sbjct 1071 ATSGKRFPVLIQGPTSSGKTSMIKYLADITGHKFVRINNHEHTDLQEYLGTYV------- 1123
Query 110 SCGSEGSAEAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHR 169
T K F +GVL LR G WI+LDELNLAP LE LN LLD
Sbjct 1124 -----------TDDTGKLSF--KEGVLVEALRKGYWIVLDELNLAPTDVLEALNRLLDDN 1170
Query 170 RCVYLPTPED 179
R +++P ++
Sbjct 1171 RELFIPETQE 1180
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 37/157 (23%)
Query 55 RHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVP---SAEVE--- 108
+ VLL G G GKT + LLA+ GR L+ +N ++TE D+LGA P +E++
Sbjct 1361 KEPVLLVGETGCGKTTICQLLAQFMGRELITLNAHQNTETGDILGAQRPVRNRSEIQYKL 1420
Query 109 --------------------------ESCGSEGSAEAATQRQK-----KPPFVWTDGVLT 137
+S + + + QK F W+DG L
Sbjct 1421 IKSLKTALNIANDQDVDLKELLQLYSKSDNKNIAEDVQLEIQKLRDSLNVLFEWSDGPLI 1480
Query 138 RNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYL 174
+ +R GN+ LLDE++LA LE LN +L+ R + L
Sbjct 1481 QAMRTGNFFLLDEISLADDSVLERLNSVLEPERSLLL 1517
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 22/132 (16%)
Query 41 KLASGLGGLGSS-SGRHAVLLEGPPGAGKTFVVGLLARL--CGRRLVRINLSEDTELADL 97
K S L LG ++L G G+GKTF++ L++ C +V+I+L E T+ L
Sbjct 293 KTVSSLRQLGRKIQNSTPIMLIGKAGSGKTFLINELSKYMGCHDSIVKIHLGEQTDAKLL 352
Query 98 LGAVVPSAEVEESCGSEGSAEAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQ 157
+G T K F W GVL ++ G W+L+++++ AP
Sbjct 353 IGTY-------------------TSGDKPGTFEWRAGVLATAVKEGRWVLIEDIDKAPTD 393
Query 158 TLEGLNPLLDHR 169
L L LL+ R
Sbjct 394 VLSILLSLLEKR 405
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 0/46 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVP 103
VLL G G GKT VV LA++ ++L IN+S+ TE DLLG P
Sbjct 649 VLLVGETGTGKTTVVQQLAKMLAKKLTVINVSQQTETGDLLGGYKP 694
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 0/38 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLL 166
F + +G L + +RAG W+LLDE+NLA TLE ++ LL
Sbjct 809 FNFVEGSLVKTIRAGEWLLLDEVNLATADTLESISDLL 846
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 0/39 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLD 167
F W DG+L + + G+W++LD NL L+ LN LL+
Sbjct 2192 FEWFDGMLVKAVEKGHWLILDNANLCSPSVLDRLNSLLE 2230
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 0/62 (0%)
Query 39 QCKLASGLGGLGSSSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLL 98
+C +A L + + ++L GP +GKT + LA + G R+ +++ D + D+L
Sbjct 2031 ECNVAVYESVLKAINNNWPLVLVGPSNSGKTETIRFLASILGPRVDVFSMNSDIDSMDIL 2090
Query 99 GA 100
G
Sbjct 2091 GG 2092
> bbo:BBOV_III002250 17.m07217; ATPase associated with various
cellular activities (AAA) family protein; K14572 midasin
Length=4334
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/118 (45%), Positives = 71/118 (60%), Gaps = 17/118 (14%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
+LLEG PG GKT +G LA + +LVR+NLSE T++ DL G+ +PS GS
Sbjct 1429 ILLEGEPGVGKTASIGALATIYDTKLVRVNLSEHTDIMDLFGSDIPS----------GSG 1478
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLP 175
+A+ F W +G + G+W +LDELNLA QQ LEGLN LLDHRR ++P
Sbjct 1479 DASR-------FRWHNGPVLDAAINGHWAVLDELNLASQQVLEGLNALLDHRRETFIP 1529
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 41/163 (25%)
Query 13 VKSPSVRKSLGRLLRCLLLIQQQQQQQCKLASGLGGLGSSSGRHAVLLEGPPGAGKTFVV 72
+ +P++ K+L RL C++ SGL R VLLEGP AGKT +V
Sbjct 706 IVTPNIAKNLKRL--------------CRILSGL--------RVPVLLEGPTAAGKTSLV 743
Query 73 GLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSAEAATQRQKKPPFVWT 132
L + G R VRIN E T++++ LG V + A+ + + +
Sbjct 744 QYLCAITGHRCVRINNHEHTDISEYLGQFV--------------FDVASSKLR-----FN 784
Query 133 DGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLP 175
G + ++ G+W++LDELNLAP Q LE +N +LD R +Y+P
Sbjct 785 YGPIVTAMKQGDWVILDELNLAPSQVLEAINRILDDNREIYIP 827
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
VLL GP +GK +V +AR G+ L I + + DLLG G E
Sbjct 1720 VLLVGPSLSGKKSLVKSMARSRGQVLTEITMLPCFDTGDLLG------------GFEQVY 1767
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLD 167
+T P F W D L R++ G W+LL ++ L+ LN LL+
Sbjct 1768 TDST-----PSFRWVDSALVRSIECGTWVLLSGIHNTNPAILDRLNSLLE 1812
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 0/47 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYLP 175
F W DG LTR++ G+W L DE++LA LE +N +L+ + +P
Sbjct 1180 FEWVDGPLTRSMEKGHWFLADEISLADDAVLEKMNSVLESESTLTIP 1226
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 0/42 (0%)
Query 129 FVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRR 170
F + DG+L R ++ G WILLDE+NLAP L+ +L +RR
Sbjct 459 FKFEDGLLIRAMQEGWWILLDEINLAPSDLLQRFVGILSNRR 500
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 0/49 (0%)
Query 55 RHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVP 103
R VLL G G GKT V LLARL L +NLS++TE +D +G+ P
Sbjct 1031 REPVLLVGDTGIGKTTVCQLLARLNNCELEVLNLSKNTEASDFIGSFRP 1079
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 0/46 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVP 103
VLL G G GKT +V A+L G L S+ +E DL+G P
Sbjct 288 VLLVGETGTGKTAIVQQFAKLTGNVLKVYVFSDQSEAEDLIGGFYP 333
> cel:F55F10.1 hypothetical protein; K14572 midasin
Length=4368
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 68/117 (58%), Gaps = 16/117 (13%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
+LLEG PG GK+ V LA+L G + R+NLS+ T+L+DL G+ VP +G+
Sbjct 1352 ILLEGAPGCGKSSTVMALAQLTGNPITRLNLSDQTDLSDLFGSDVPV------LTEDGTM 1405
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYL 174
F W DG + + ++ G WILLDE+NLA Q LEGLN DHRR +Y+
Sbjct 1406 ----------TFRWEDGPVLKAIKKGEWILLDEMNLASQSVLEGLNACFDHRRVLYI 1452
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 25/119 (21%)
Query 57 AVLLEGPPGAGKTFVVGLLARLCGR-RLVRINLSEDTELADLLGAVVPSAEVEESCGSEG 115
AVL+ G G GKT L+ + GR +L IN E TE ADLLG + P
Sbjct 1015 AVLMVGETGGGKT----TLSEVVGRGKLRSINCHERTETADLLGRLRP------------ 1058
Query 116 SAEAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYL 174
++ F W+DGV+ +R G +L+DE++LA LE LNPL + R + L
Sbjct 1059 --------KQDGGFEWSDGVVISAMRDGVPLLVDEISLAEDSVLERLNPLFEEDRALLL 1109
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 0/53 (0%)
Query 53 SGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSA 105
SGR +LLEG AGKT +V L++ G R+VRIN E T++ + +G+ V A
Sbjct 743 SGRFPILLEGETSAGKTSIVCHLSKATGNRIVRINNHEHTDVQEYMGSYVADA 795
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 45/154 (29%)
Query 59 LLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAV----------------- 101
LL GP GK V+ +A LCG+RL I L+ DT+ +L+G+
Sbjct 1662 LLVGPRNCGKRSVIENVANLCGKRLRTIALNADTDAQELIGSYEQVVDEDCLPIAKKQIV 1721
Query 102 -------VPSAEVE--ESCGSEGSAEAATQ-------------------RQKKPPFVWTD 133
P A +E ++ G EA + Q F WTD
Sbjct 1722 KILEHKEAPEAFIEKVKNAGDLNKLEATVELILSEIGNIEEIQDVLNIANQSSMRFEWTD 1781
Query 134 GVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLD 167
V G+W+L++++NL L+ LN L+
Sbjct 1782 SVFVDAYLHGDWLLIEDVNLCSAAVLDRLNSCLE 1815
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 19/117 (16%)
Query 54 GRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGS 113
H ++EGP G GK+F+ A+ G L + + + + L GS
Sbjct 78 NHHFAIIEGPLGCGKSFLGRYAAQTLGLPLHIMQMGDQIDSKTLF-------------GS 124
Query 114 EGSAEAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRR 170
E A Q FVW + L+A +LL++++ A + + + HR+
Sbjct 125 YHCTEVAGQ------FVWKESAFATWLQAPGVVLLEDIDAANADVISKIVDIASHRQ 175
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 0/35 (0%)
Query 128 PFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGL 162
PF G + G+W+L+DE+NLAP + L+ +
Sbjct 515 PFALQKGAVLEAAEKGHWLLVDEINLAPPECLDAI 549
> tpv:TP03_0591 hypothetical protein; K14572 midasin
Length=1762
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 15/104 (14%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
+LLEG PG GKT+ V +A+ ++L+R+NL+E T+++DLLG+ VPS + + S
Sbjct 1672 ILLEGNPGIGKTYNVCKIAKKYKKKLIRVNLNEFTDISDLLGSFVPSDKND-------SG 1724
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEG 161
E + FVW +G L + G+W+LLDELNLA + LEG
Sbjct 1725 EIS--------FVWKNGPLLECVVNGSWVLLDELNLASSEILEG 1760
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query 53 SGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCG 112
+G H VLL G G GKT +V LL++ +L N + +T+ D +G+ VP+
Sbjct 1349 NGEH-VLLVGETGIGKTTIVQLLSKFFKTKLNIFNCNYNTDTIDFIGSFVPT-------- 1399
Query 113 SEGSAEAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCV 172
+ P F+W +G L ++ GNW L DE+NL LE +N +L+ +
Sbjct 1400 --------NKGDSFPNFIWKNGKLIESMIKGNWFLFDEINLVQDSILEKINSILEFNSYI 1451
Query 173 YLPTPEDP 180
L + P
Sbjct 1452 ILNSGSRP 1459
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 21/117 (17%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
+LLEGP AGKT +V L +L G + VRIN ++ ++ + +G
Sbjct 1017 ILLEGPTAAGKTSIVTYLCKLTGNKCVRINNYDNIDITEYIGQY---------------- 1060
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRRCVYL 174
V+ G+L ++ G W++LDELNLA LE LN +LD + +Y+
Sbjct 1061 -----HFINGKLVFQYGLLVIAMKYGYWVILDELNLASSNVLECLNRILDDNKEIYI 1112
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSA 117
VLL G G GKT ++ A++ G L SE+++ +DLLG +P E G E
Sbjct 645 VLLVGETGTGKTALIQKFAQITGNVLKVFVFSENSDSSDLLGNFMPKNITTEEAGLE--- 701
Query 118 EAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLA 154
K +++ DG+L ++ G W+LLDE+NL+
Sbjct 702 --------KVKYIFNDGILLECIKNGYWLLLDEINLS 730
Score = 30.4 bits (67), Expect = 4.4, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 39/88 (44%), Gaps = 22/88 (25%)
Query 65 GAGKTFVVGLLARLCG---RRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSAEAAT 121
G+ K + + LL++ G ++ + E TE+ L+G+ + + E
Sbjct 342 GSCKNYYIRLLSKGLGMADNEVINVYTDESTEIKALIGSWITGENIGE------------ 389
Query 122 QRQKKPPFVWTDGVLTRNLRAGNWILLD 149
FV++ G++ R ++ G W++ D
Sbjct 390 -------FVYSYGIVARAVKEGKWLIFD 410
> bbo:BBOV_III007160 17.m07628; hypothetical protein; K11269 chromosome
transmission fidelity protein 18
Length=747
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 0/34 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSED 91
+LL GP G GK+ VV +LAR CG +V IN SED
Sbjct 245 LLLGGPAGVGKSTVVNVLARHCGFDVVEINASED 278
> tpv:TP04_0632 replication factor C
Length=1193
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 0/34 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSED 91
+L+ GPPG GKT +V ++A+ CG +V IN S+D
Sbjct 619 LLIGGPPGVGKTSLVNVIAKHCGYNVVEINSSDD 652
> mmu:19687 Rfc1, 140kDa, Alp145, MGC96526, RFC140, Recc1; replication
factor C (activator 1) 1; K10754 replication factor
C subunit 1
Length=1131
Score = 38.9 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query 24 RLLRCLLLIQQQQQQQCKLASGLGGLGSS---SGRHAVLLEGPPGAGKTFVVGLLARLCG 80
+LLR L + ++ K A+ G L S S A LL GPPG GKT L+ + G
Sbjct 594 KLLRWLRNWHKSSPEEKKHAAKFGKLASKDDGSSFKAALLSGPPGVGKTTTASLVCQELG 653
Query 81 RRLVRINLSEDTELADLLGAVVPSA 105
V +N S DT + L AVV +
Sbjct 654 YSYVELNAS-DTRSKNSLKAVVAES 677
> cpv:cgd8_610 DNA replication repC1, AAA+ ATpase with a BRCT
domain at the N-terminus ; K10754 replication factor C subunit
1
Length=874
Score = 37.7 bits (86), Expect = 0.025, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 0/35 (0%)
Query 57 AVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSED 91
A LL GPPG GK+ V L+A+ CG + +N S+D
Sbjct 336 AALLSGPPGIGKSTVATLIAKKCGYIPIEMNASDD 370
> hsa:5981 RFC1, A1, MGC51786, MHCBFB, PO-GA, RECC1, RFC, RFC140;
replication factor C (activator 1) 1, 145kDa; K10754 replication
factor C subunit 1
Length=1148
Score = 37.7 bits (86), Expect = 0.028, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
Query 24 RLLRCLLLIQQQQQQQCKLASGLG---GLGSSSGRHAVLLEGPPGAGKTFVVGLLARLCG 80
+LLR L Q+ + K A+ G G S A LL GPPG GKT L+ + G
Sbjct 610 KLLRWLRNWQKSSSEDKKHAAKFGKFSGKDDGSSFKAALLSGPPGVGKTTTASLVCQELG 669
Query 81 RRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSAEAATQRQKKPPFVW--TDGVLTR 138
V +N S DT L A+V + S S AA+ K + DG+
Sbjct 670 YSYVELNAS-DTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDEVDGMAGN 728
Query 139 NLRAG 143
R G
Sbjct 729 EDRGG 733
> pfa:PF14_0548 ATPase, putative; K12196 vacuolar protein-sorting-associated
protein 4
Length=419
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 21/136 (15%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLS--------EDTELADLLG--------AV 101
+LL GPPG GKTF+ + C ++ S E + L A+
Sbjct 150 ILLYGPPGTGKTFLALACSNECNMNFFNVSSSDLVSKYQGESEKYIKCLFETAKEHSPAI 209
Query 102 VPSAEVEESCGSEGSAEAATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEG 161
+ E++ CGS E + R+ K F+ LT N I++ N P G
Sbjct 210 IFIDEIDSLCGSRTDGENESTRRIKTEFLINMSGLTN--YKNNIIVMGATN-TPWSLDSG 266
Query 162 LNPLLDHRRCVYLPTP 177
+ R +Y+P P
Sbjct 267 FRRRFEKR--IYIPLP 280
> dre:554366 chtf18, MGC113153, MGC192547, zgc:113153; CTF18,
chromosome transmission fidelity factor 18 homolog (S. cerevisiae);
K11269 chromosome transmission fidelity protein 18
Length=957
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 0/33 (0%)
Query 59 LLEGPPGAGKTFVVGLLARLCGRRLVRINLSED 91
LL GPPG GKT + ++A+ G +V IN S+D
Sbjct 370 LLSGPPGLGKTTLAHIIAKHAGYNVVEINASDD 402
> ath:AT5G08470 PEX1; PEX1 (peroxisome 1); ATP binding / ATPase/
binding / nucleoside-triphosphatase/ nucleotide binding /
protein binding; K13338 peroxin-1
Length=1130
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 0/32 (0%)
Query 55 RHAVLLEGPPGAGKTFVVGLLARLCGRRLVRI 86
R VLL GPPG GKT +VG A C R + +
Sbjct 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
> mmu:71382 Pex1, 5430414H02Rik, E330005K07Rik, MGC102188, ZWS1;
peroxisomal biogenesis factor 1; K13338 peroxin-1
Length=1244
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 0/33 (0%)
Query 55 RHAVLLEGPPGAGKTFVVGLLARLCGRRLVRIN 87
R +LL GPPG GKT + G++AR G + I
Sbjct 835 RTGILLYGPPGTGKTLLAGVVARESGMNFISIK 867
> bbo:BBOV_III006020 17.m07531; ATP-dependent protease La family
protein
Length=1122
Score = 36.6 bits (83), Expect = 0.051, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query 50 GSSSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG 99
G++SG+ + L GPPG GKT + +A L R+L R +L ++A+L G
Sbjct 627 GNASGK-IICLCGPPGVGKTSIATAVAELLNRKLYRFSLGGLFDVAELRG 675
> mmu:23924 Katna1; katanin p60 (ATPase-containing) subunit A1
(EC:3.6.4.3); K07767 microtubule-severing ATPase [EC:3.6.4.3]
Length=493
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 22/140 (15%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLS--------EDTELADLLG--------AV 101
VL+ GPPG GKT + +A C ++ S E +L LL A
Sbjct 247 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPAT 306
Query 102 VPSAEVEESCGSEGSAE--AATQRQKKPPFVWTDGV--LTRNLRAGNWILLDELNLAPQQ 157
+ E++ C G++E A++R K V DGV + N +++ P
Sbjct 307 IFIDEIDSICSRRGTSEEHEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWD 366
Query 158 TLEGLNPLLDHRRCVYLPTP 177
E L L+ R +Y+P P
Sbjct 367 IDEALRRRLEKR--IYIPLP 384
> mmu:74142 Lonp1, 1200017E13Rik, LON, Prss15; lon peptidase 1,
mitochondrial; K08675 Lon-like ATP-dependent protease [EC:3.4.21.-]
Length=949
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 50 GSSSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG 99
GS+ G+ + GPPG GKT + +AR GR R ++ T++A++ G
Sbjct 501 GSTQGK-ILCFHGPPGVGKTSIARSIARALGREYFRFSVGGMTDVAEIKG 549
> hsa:11104 KATNA1; katanin p60 (ATPase containing) subunit A
1 (EC:3.6.4.3); K07767 microtubule-severing ATPase [EC:3.6.4.3]
Length=311
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 22/140 (15%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLS--------EDTELADLLG--------AV 101
VL+ GPPG GKT + +A C ++ S E +L LL A
Sbjct 169 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPAT 228
Query 102 VPSAEVEESCGSEGSAE--AATQRQKKPPFVWTDGV--LTRNLRAGNWILLDELNLAPQQ 157
+ E++ C G++E A++R K V DGV + N +++ P
Sbjct 229 IFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWD 288
Query 158 TLEGLNPLLDHRRCVYLPTP 177
E L L+ R +Y+P P
Sbjct 289 IDEALRRRLEKR--IYIPLP 306
> ath:AT1G80350 ERH3; ERH3 (ECTOPIC ROOT HAIR 3); ATP binding
/ nucleoside-triphosphatase/ nucleotide binding; K07767 microtubule-severing
ATPase [EC:3.6.4.3]
Length=523
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 23/142 (16%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSE-------DTE-----LADLLGAVVPSA 105
VL+ GPPG GKT + +A CG ++ + ++E L DL A PS
Sbjct 275 VLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPST 334
Query 106 ----EVEESCGSEGSA--EAATQRQKKPPFVWTDGV---LTRNLRAGNWILLDELNLAPQ 156
E++ C S G + +++R K V DGV T + +++ P
Sbjct 335 IFIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPW 394
Query 157 QTLEGLNPLLDHRRCVYLPTPE 178
E L L+ R +Y+P P+
Sbjct 395 DIDEALRRRLEKR--IYIPLPD 414
> cel:K04D7.2 mspn-1; Mitochondrial Sorting of Proteins (yeast
MSP) in Nematode family member (mspn-1)
Length=342
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query 49 LGSSSGRH------AVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTE 93
S SG H +LL GPPG GKT + +AR G R + + +S T+
Sbjct 105 FASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTD 155
> tgo:TGME49_070900 ATPase, AAA family domain-containing protein
(EC:2.7.4.14); K11269 chromosome transmission fidelity protein
18
Length=1600
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 0/45 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVV 102
+LL GPPG GKT + + AR G +V +N S+D A LL V+
Sbjct 486 LLLGGPPGIGKTTLAHVCARHFGFDVVEVNGSDDRSRATLLPLVM 530
> eco:b0882 clpA, ECK0873, JW0866, lopD; ATPase and specificity
subunit of ClpA-ClpP ATP-dependent serine protease, chaperone
activity; K03694 ATP-dependent Clp protease ATP-binding
subunit ClpA
Length=758
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query 9 LPEVVKSPSVR---KSLGRLLRCLLLIQQQQ----QQQCKLA-SGLGGLGSSSGRHAVLL 60
+PE S S R K+LG L+ L+ Q + + K+A +GLG G + L
Sbjct 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG--SFLF 493
Query 61 EGPPGAGKTFVVGLLARLCGRRLVRINLSEDTE---LADLLGA 100
GP G GKT V L++ G L+R ++SE E ++ L+GA
Sbjct 494 AGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGA 536
> dre:492790 katnal1, zgc:101696; katanin p60 subunit A-like 1
(EC:3.6.4.3); K07767 microtubule-severing ATPase [EC:3.6.4.3]
Length=488
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 22/140 (15%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLS--------EDTELADLLGAV----VPSA 105
VL+ GPPG GKT + +A CG ++ S E +L LL + P+
Sbjct 242 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTT 301
Query 106 ----EVEESCGSEGSAE--AATQRQKKPPFVWTDGV--LTRNLRAGNWILLDELNLAPQQ 157
E++ CG G+++ A++R K V DGV + +++ P
Sbjct 302 IFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGVGGAQESEDPSKMVMVLAATNFPWD 361
Query 158 TLEGLNPLLDHRRCVYLPTP 177
E L L+ R +Y+P P
Sbjct 362 IDEALRRRLEKR--IYIPLP 379
> xla:414577 chtf18, MGC81266; CTF18, chromosome transmission
fidelity factor 18 homolog; K11269 chromosome transmission fidelity
protein 18
Length=1000
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 0/33 (0%)
Query 59 LLEGPPGAGKTFVVGLLARLCGRRLVRINLSED 91
LL GPPG GKT + ++AR G +V +N S+D
Sbjct 393 LLCGPPGLGKTTLAHVIARHAGYNVVEMNASDD 425
> xla:399380 katna1; katanin p60 (ATPase containing) subunit A
1 (EC:3.6.4.3); K07767 microtubule-severing ATPase [EC:3.6.4.3]
Length=488
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 22/140 (15%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLS--------EDTELADLLGAV----VPSA 105
VL+ GPPG GKT + +A C I+ S E +L LL + P+
Sbjct 242 VLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTT 301
Query 106 ----EVEESCGSEGSAE--AATQRQKKPPFVWTDGV--LTRNLRAGNWILLDELNLAPQQ 157
E++ C G++E A++R K V DGV + N +++ P
Sbjct 302 IFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWD 361
Query 158 TLEGLNPLLDHRRCVYLPTP 177
E L L+ R +Y+P P
Sbjct 362 IDEALRRRLEKR--IYIPLP 379
> cel:F11C1.5 hypothetical protein
Length=1804
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 20/112 (17%)
Query 59 LLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEGSAE 118
+L GP G+GK+ ++G L+R V + L +D +L+
Sbjct 402 ILIGPKGSGKSRILGELSRRLNFNYVTMVLHQDMNTRELI-------------------- 441
Query 119 AATQRQKKPPFVWTDGVLTRNLRAGNWILLDELNLAPQQTLEGLNPLLDHRR 170
++ VW D +L R G+ +LD + + + L+ L+ HRR
Sbjct 442 QRRHMKENGDTVWEDSILVTAARNGDVCVLDGVEMVHSSVIMSLSQLIYHRR 493
> dre:553631 katna1, MGC110580, si:dkey-15j16.1, zgc:110580; katanin
p60 (ATPase-containing) subunit A 1 (EC:3.6.4.3); K07767
microtubule-severing ATPase [EC:3.6.4.3]
Length=485
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 27/142 (19%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDT-----------------ELADLLG- 99
VL+ GPPG GKT + +A C R N+S T E+A
Sbjct 240 VLMVGPPGTGKTLLAKAVATEC--RTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAP 297
Query 100 AVVPSAEVEESCGSEGSAE--AATQRQKKPPFVWTDGV--LTRNLRAGNWILLDELNLAP 155
+ E++ C G++E A++R K V DGV + N + ++L N P
Sbjct 298 TTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAATNF-P 356
Query 156 QQTLEGLNPLLDHRRCVYLPTP 177
E L L+ R +Y+P P
Sbjct 357 WDIDEALRRRLEKR--IYIPLP 376
> mmu:231912 Katnal1, MGC40859; katanin p60 subunit A-like 1 (EC:3.6.4.3);
K07767 microtubule-severing ATPase [EC:3.6.4.3]
Length=488
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLS--------EDTELADLLGAV----VPSA 105
VL+ GPPG GKT + +A CG ++ S E +L LL + P+
Sbjct 242 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTT 301
Query 106 ----EVEESCGSEGSAE--AATQRQKKPPFVWTDGV---LTRNLRAGNWILLDELNLAPQ 156
E++ C G+++ A++R K + DGV L + + ++L N P
Sbjct 302 IFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNF-PW 360
Query 157 QTLEGLNPLLDHRRCVYLPTP 177
E L L+ R +Y+P P
Sbjct 361 DIDEALRRRLEKR--IYIPLP 379
> hsa:84056 KATNAL1, MGC2599; katanin p60 subunit A-like 1 (EC:3.6.4.3);
K07767 microtubule-severing ATPase [EC:3.6.4.3]
Length=490
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLS--------EDTELADLLGAV----VPSA 105
VL+ GPPG GKT + +A CG ++ S E +L LL + P+
Sbjct 244 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTT 303
Query 106 ----EVEESCGSEGSAE--AATQRQKKPPFVWTDGV---LTRNLRAGNWILLDELNLAPQ 156
E++ C G+++ A++R K + DGV L + + ++L N P
Sbjct 304 IFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNF-PW 362
Query 157 QTLEGLNPLLDHRRCVYLPTP 177
E L L+ R +Y+P P
Sbjct 363 DIDEALRRRLEKR--IYIPLP 381
> hsa:63922 CHTF18, C16orf41, C321D2.2, C321D2.3, C321D2.4, CHL12,
Ctf18, RUVBL; CTF18, chromosome transmission fidelity factor
18 homolog (S. cerevisiae); K11269 chromosome transmission
fidelity protein 18
Length=975
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 0/57 (0%)
Query 59 LLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSEG 115
LL GPPG GKT + ++AR G +V +N S+D + + ++E G+ G
Sbjct 371 LLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMESVLGAGG 427
> ath:AT5G22010 AtRFC1; AtRFC1 (replication factor C 1); ATP binding
/ DNA binding / DNA clamp loader/ nucleoside-triphosphatase/
nucleotide binding; K10754 replication factor C subunit
1
Length=956
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query 49 LGSSSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSE-----DTELADLLGAVVP 103
L + + AVLL G PG GKT L++++ G + V +N S+ ++ +A +G
Sbjct 387 LNDAGSKKAVLLSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNA 446
Query 104 SAEVEESCGSEGSAEAATQRQKKPPFV 130
++ V+E +E A A R K P V
Sbjct 447 NS-VKELVNNEAMA-ANFDRSKHPKTV 471
> tgo:TGME49_108580 lon protease, putative (EC:3.4.21.53); K08675
Lon-like ATP-dependent protease [EC:3.4.21.-]
Length=1498
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 0/42 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG 99
+ L GPPG GKT V +AR R+ RI+L ++A+L G
Sbjct 1030 ICLVGPPGVGKTSVGQSIARALHRKFYRISLGGMCDVAELRG 1071
> ath:AT3G05780 LON3; LON3 (LON PROTEASE 3); ATP binding / ATP-dependent
peptidase/ nucleoside-triphosphatase/ nucleotide
binding / serine-type endopeptidase/ serine-type peptidase;
K08675 Lon-like ATP-dependent protease [EC:3.4.21.-]
Length=924
Score = 34.3 bits (77), Expect = 0.28, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query 50 GSSSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG 99
G+S G+ + L GPPG GKT + +AR R+ R ++ +++A++ G
Sbjct 436 GTSQGK-IICLSGPPGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKG 484
> ath:AT1G04730 AAA-type ATPase family protein; K11269 chromosome
transmission fidelity protein 18
Length=954
Score = 34.3 bits (77), Expect = 0.28, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSED 91
+LL G PG GKT + + A+ CG R+V IN S++
Sbjct 348 LLLCGAPGLGKTTLAHIAAKHCGYRVVEINASDE 381
> sce:YDR394W RPT3, YNT1, YTA2; One of six ATPases of the 19S
regulatory particle of the 26S proteasome involved in the degradation
of ubiquitinated substrates; substrate of N-acetyltransferase
B; K03063 26S proteasome regulatory subunit T3
Length=428
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 0/33 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSE 90
VLL GPPG GKT +V +A +R+N SE
Sbjct 209 VLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSE 241
> ath:AT4G23940 FtsH protease, putative
Length=946
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 0/39 (0%)
Query 56 HAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTEL 94
H VLLEGPPG GKT V +A G ++ SE E+
Sbjct 464 HGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEV 502
> ath:AT5G26860 LON1; LON1 (LON PROTEASE 1); ATP binding / ATP-dependent
peptidase/ serine-type peptidase; K08675 Lon-like
ATP-dependent protease [EC:3.4.21.-]
Length=985
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 50 GSSSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG 99
G+S G+ + L GPPG GKT + +AR R+ R ++ ++A++ G
Sbjct 498 GTSQGK-IICLSGPPGVGKTSIGRSIARALNRKFFRFSVGGLADVAEIKG 546
> hsa:9361 LONP1, LON, LONP, LonHS, MGC1498, PIM1, PRSS15, hLON;
lon peptidase 1, mitochondrial; K08675 Lon-like ATP-dependent
protease [EC:3.4.21.-]
Length=959
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query 50 GSSSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG 99
GS+ G+ + GPPG GKT + +AR R R ++ T++A++ G
Sbjct 512 GSTQGK-ILCFYGPPGVGKTSIARSIARALNREYFRFSVGGMTDVAEIKG 560
> dre:767670 vps4a, MGC153907, zgc:153907; vacuolar protein sorting
4a (yeast); K12196 vacuolar protein-sorting-associated
protein 4
Length=440
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 40/149 (26%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG------------------ 99
+LL GPPG GK+++ +A ++S ++ LG
Sbjct 162 ILLFGPPGTGKSYLAKAVATEANNSTF-FSVSSSDLMSKWLGESEKLVKNLFDLARQHKP 220
Query 100 AVVPSAEVEESCGSEGSAEAATQRQKKPPFVW--------TDGVLTRNLRAGNWILLDEL 151
+++ EV+ CGS E+ R+ K F+ DG+L W+ L
Sbjct 221 SIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGILVLGATNIPWV----L 276
Query 152 NLAPQQTLEGLNPLLDHRRCVYLPTPEDP 180
+ A ++ E + +Y+P PE+P
Sbjct 277 DAAIRRRFE---------KRIYIPLPEEP 296
> tpv:TP02_0361 ATP-dependent protease; K01362 [EC:3.4.21.-]
Length=1115
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 50 GSSSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG 99
G +SG+ + L GPPG GKT + +A R+L R +L ++A++ G
Sbjct 593 GQTSGK-IICLIGPPGVGKTSIAMAMAESLNRKLYRFSLGGLFDIAEIKG 641
> tgo:TGME49_061020 axonemal dynein heavy chain, putative (EC:2.4.1.14
1.1.1.6 1.1.1.47 1.6.5.3)
Length=4154
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 31/133 (23%)
Query 55 RHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLGAVVPSAEVEESCGSE 114
RH V + GP G+GK+ V LAR + V+ T D+ V E+
Sbjct 1574 RHCVFVMGPAGSGKSSVWKSLARAQDQVGVK------TTWVDINPKAVTPNEL------Y 1621
Query 115 GSAEAATQRQKKPPFVWTDGVLTRNLR--------AGNWILLD-ELNLAPQQTLEGLNPL 165
G + +T+ W DG+L++ +R + WI+LD +L+ +E +N +
Sbjct 1622 GYVKLSTRE-------WKDGLLSKTMRTLGQIQDISPKWIVLDGDLD---ANWIESMNSV 1671
Query 166 LDHRRCVYLPTPE 178
+D + + L + E
Sbjct 1672 MDDNKILTLASNE 1684
> ath:AT1G02890 AAA-type ATPase family protein
Length=1224
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELAD-LLG 99
+LL GPPG GKT + +A G + I++S T D +LG
Sbjct 988 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKVDSMLG 1030
> cpv:cgd7_4690 RF-C paralog (Ctf18p) AAA+ ATpase ; K11269 chromosome
transmission fidelity protein 18
Length=914
Score = 33.5 bits (75), Expect = 0.49, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 0/34 (0%)
Query 58 VLLEGPPGAGKTFVVGLLARLCGRRLVRINLSED 91
+L+ GP G+GKT +V +LA+ CG + I +S++
Sbjct 313 LLIGGPSGSGKTSMVKILAKQCGYNVNEIKVSDE 346
> ath:AT5G47040 LON2; LON2 (LON PROTEASE 2); ATP binding / ATP-dependent
peptidase/ nucleoside-triphosphatase/ nucleotide
binding / serine-type endopeptidase/ serine-type peptidase;
K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Length=888
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 0/38 (0%)
Query 62 GPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG 99
GPPG GKT + +A GR+ VR++L + AD+ G
Sbjct 408 GPPGVGKTSLASSIAAALGRKFVRLSLGGVKDEADIRG 445
> dre:563257 lonp1, fc64d11, prss15, wu:fc64d11; lon peptidase
1, mitochondrial; K08675 Lon-like ATP-dependent protease [EC:3.4.21.-]
Length=966
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query 50 GSSSGRHAVLLEGPPGAGKTFVVGLLARLCGRRLVRINLSEDTELADLLG 99
GS+ G+ + GPPG GKT + +AR R R ++ T++A++ G
Sbjct 526 GSTQGK-ILCFYGPPGVGKTSIARSIARALNREYFRFSVGGMTDVAEIKG 574
Lambda K H
0.314 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 5866798756
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40