bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_3942_orf3
Length=210
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_092220 26S proteasome non-ATPase regulatory subunit... 253 3e-67
pfa:MAL13P1.190 proteasome regulatory component, putative; K03... 213 4e-55
dre:393544 psmd3, MGC65867, zgc:65867, zgc:77369; proteasome (... 189 4e-48
mmu:22123 Psmd3, AI255837, AntP91a, D11Bwg1349e, Psd3, Tstap91... 188 1e-47
hsa:5709 PSMD3, P58, RPN3, S3, TSTA2; proteasome (prosome, mac... 188 1e-47
xla:444384 psmd3, MGC82894; proteasome (prosome, macropain) 26... 186 4e-47
ath:AT1G20200 EMB2719 (EMBRYO DEFECTIVE 2719); enzyme regulato... 181 2e-45
bbo:BBOV_II001520 18.m06117; 26S proteasome non-ATPase regulat... 174 2e-43
ath:AT1G75990 26S proteasome regulatory subunit S3, putative (... 174 2e-43
tpv:TP04_0438 proteasome regulatory component; K03033 26S prot... 173 4e-43
cpv:cgd8_4060 26S proteasomal subunit S3; PINT domain containi... 166 6e-41
sce:YER021W RPN3, SUN2; Essential, non-ATPase regulatory subun... 153 4e-37
cel:C30C11.2 rpn-3; proteasome Regulatory Particle, Non-ATPase... 149 6e-36
ath:AT2G19560 EER5; EER5 (ENHANCED ETHYLENE RESPONSE 5) 45.4 1e-04
xla:379813 cops3, MGC53451; COP9 constitutive photomorphogenic... 42.0 0.001
hsa:8533 COPS3, CSN3, SGN3; COP9 constitutive photomorphogenic... 40.4 0.004
mmu:26572 Cops3, Csn3, Sgn3; COP9 (constitutive photomorphogen... 40.4 0.004
dre:100334543 COP9 signalosome complex subunit 3-like 37.7 0.027
dre:335720 cops3, wu:fc32a02, wu:fk59f01, zgc:111903, zgc:5564... 37.4 0.040
hsa:5718 PSMD12, MGC75406, Rpn5, p55; proteasome (prosome, mac... 32.7 0.91
bbo:BBOV_III003080 17.m10673; hypothetical protein 32.7 0.94
mmu:66997 Psmd12, 1500002F15Rik, AI480719, P55; proteasome (pr... 32.3 1.3
xla:431923 hypothetical protein MGC81129; K03035 26S proteasom... 31.6 2.0
tpv:TP02_0358 hypothetical protein 31.6 2.2
xla:734284 pcid2, MGC84981; PCI domain containing 2 31.6
bbo:BBOV_III006050 17.m07534; hypothetical protein 31.2 3.0
dre:559762 DnaJ homolog subfamily C member 16-like; K09536 Dna... 30.8 3.4
bbo:BBOV_IV008290 23.m05745; hypothetical protein 30.8 3.4
xla:399245 psmd12, MGC80339; proteasome (prosome, macropain) 2... 30.4 4.8
dre:796199 fat-like 30.0 6.6
> tgo:TGME49_092220 26S proteasome non-ATPase regulatory subunit,
putative ; K03033 26S proteasome regulatory subunit N3
Length=558
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 157/199 (78%), Gaps = 2/199 (1%)
Query 1 RLAALKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQ 60
RLA LKK IVVELLMGDIPER +F+++ A L+PY+ IVLAVRSGDLHAFA V+ E+
Sbjct 346 RLAVLKKAIVVELLMGDIPERAIFSRKETRAALLPYKHIVLAVRSGDLHAFARVMSDFEK 405
Query 61 RFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILD 120
F D T L+ RLH NVIRAGLR+ISLSYSRI L+D+A+KLGLDSA AE + KAILD
Sbjct 406 AFIKDGTLFLIRRLHHNVIRAGLRLISLSYSRISLEDVAEKLGLDSAASAENIVAKAILD 465
Query 121 RVIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGSTERQQ 180
VI+A+IDH+K+ ++SKASV +Y+S EPQKAF++RITFCL L+ DAVKAMQYP + E Q
Sbjct 466 GVIEAAIDHEKKCVESKASVAIYSSTEPQKAFNKRITFCLQLHTDAVKAMQYPEAEETQT 525
Query 181 TAED--DERKRAMQEERAR 197
D DER++A+QEE AR
Sbjct 526 RGFDDVDERRKALQEEMAR 544
> pfa:MAL13P1.190 proteasome regulatory component, putative; K03033
26S proteasome regulatory subunit N3
Length=503
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 152/210 (72%), Gaps = 0/210 (0%)
Query 1 RLAALKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQ 60
+LAA K IVVELLMGDIP+R +F+ + M+ +L+PY+ +V AVR+GD++ FA V+ +
Sbjct 294 KLAATKMEIVVELLMGDIPDRSIFSNKIMYKKLIPYKHVVSAVRNGDINKFAQVMNNYTD 353
Query 61 RFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILD 120
F D Y L+ R+H NVI+ LRII+LSYSRI + DI KK+G++S+ + + KAI D
Sbjct 354 LFIHDGVYLLIKRIHHNVIKTALRIINLSYSRISINDIGKKIGIESSLDVVGITAKAIHD 413
Query 121 RVIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGSTERQQ 180
VI+ +ID++ Q+++SK++ D+Y + +P K FH+RI FCL LY+DA+KAMQYP E+++
Sbjct 414 GVIEGTIDYENQYVESKSNSDIYITGDPMKTFHKRIAFCLQLYSDAIKAMQYPDENEKKE 473
Query 181 TAEDDERKRAMQEERARAEDEDLGDDMDMI 210
E ERK QEE A+AE+ DLGDD D++
Sbjct 474 NEEAKERKMRQQEELAQAEEGDLGDDNDLL 503
> dre:393544 psmd3, MGC65867, zgc:65867, zgc:77369; proteasome
(prosome, macropain) 26S subunit, non-ATPase, 3; K03033 26S
proteasome regulatory subunit N3
Length=503
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 127/168 (75%), Gaps = 0/168 (0%)
Query 6 KKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQRFRLD 65
K IVVELL+G+IP+R F + ++ L+PY + AVR+G+L F VL Q ++F+ D
Sbjct 299 KLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTD 358
Query 66 DTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILDRVIDA 125
TYTL+ RL NVI+ G+R+ISLSYSRI L DIA+KL LDS ++AE + KAI D VI+A
Sbjct 359 GTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEA 418
Query 126 SIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYP 173
SI+H+K F+QSK ++D+Y++ EPQ AFH+RI FCLD++N +VKAM++P
Sbjct 419 SINHEKGFVQSKETMDIYSTREPQLAFHQRIAFCLDIHNMSVKAMRFP 466
> mmu:22123 Psmd3, AI255837, AntP91a, D11Bwg1349e, Psd3, Tstap91a;
proteasome (prosome, macropain) 26S subunit, non-ATPase,
3; K03033 26S proteasome regulatory subunit N3
Length=530
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 127/168 (75%), Gaps = 0/168 (0%)
Query 6 KKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQRFRLD 65
K IVVELL+G+IP+R F + ++ L+PY + AVR+G+L F VL Q ++F+ D
Sbjct 326 KLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTD 385
Query 66 DTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILDRVIDA 125
TYTL+ RL NVI+ G+R+ISLSYSRI L DIA+KL LDS ++AE + KAI D VI+A
Sbjct 386 GTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEA 445
Query 126 SIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYP 173
SI+H+K ++QSK +D+Y++ EPQ AFH+RI+FCLD++N +VKAM++P
Sbjct 446 SINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFP 493
> hsa:5709 PSMD3, P58, RPN3, S3, TSTA2; proteasome (prosome, macropain)
26S subunit, non-ATPase, 3; K03033 26S proteasome
regulatory subunit N3
Length=534
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 127/168 (75%), Gaps = 0/168 (0%)
Query 6 KKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQRFRLD 65
K IVVELL+G+IP+R F + ++ L+PY + AVR+G+L F VL Q ++F+ D
Sbjct 330 KLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQAD 389
Query 66 DTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILDRVIDA 125
TYTL+ RL NVI+ G+R+ISLSYSRI L DIA+KL LDS ++AE + KAI D VI+A
Sbjct 390 GTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEA 449
Query 126 SIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYP 173
SI+H+K ++QSK +D+Y++ EPQ AFH+RI+FCLD++N +VKAM++P
Sbjct 450 SINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFP 497
> xla:444384 psmd3, MGC82894; proteasome (prosome, macropain)
26S subunit, non-ATPase, 3; K03033 26S proteasome regulatory
subunit N3
Length=498
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 126/168 (75%), Gaps = 0/168 (0%)
Query 6 KKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQRFRLD 65
K IVVELL+G+IP+R F + + L+PY + AVR+G+L F VL+Q ++F+ D
Sbjct 294 KLLIVVELLLGEIPDRLQFRQHCLKRSLMPYFLLTQAVRTGNLSKFNQVLEQFCEKFQSD 353
Query 66 DTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILDRVIDA 125
TYTL+ RL NVI+ G+R+ISLSYSRI L DIA KL LDSA++AE + KAI D VI+A
Sbjct 354 GTYTLIIRLRHNVIKTGVRMISLSYSRISLPDIAHKLQLDSAEDAEFIVAKAIRDGVIEA 413
Query 126 SIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYP 173
I+H+K ++QSK +D+Y++ EPQ AFH+RI+FCLD++N +VKAM++P
Sbjct 414 GINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFP 461
> ath:AT1G20200 EMB2719 (EMBRYO DEFECTIVE 2719); enzyme regulator;
K03033 26S proteasome regulatory subunit N3
Length=488
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 139/208 (66%), Gaps = 6/208 (2%)
Query 1 RLAALKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQ 60
R+ K I+V LL+G+IPER +F ++ M L PY E+ AVR GDL F +V ++
Sbjct 278 RIQCNKWAILVRLLLGEIPERSIFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLD 337
Query 61 RFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDS---AKEAEAVAGKA 117
F D T+ L+ RL NVIR GLR IS+SYSRI L D+AKKL L+S +AE++ KA
Sbjct 338 TFAQDRTHNLIVRLRHNVIRTGLRNISISYSRISLPDVAKKLRLNSENPVADAESIVAKA 397
Query 118 ILDRVIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGSTE 177
I D IDA+IDH + SK + D+Y++NEPQ AF+ RI FCL+++N+AV+A+++P +T
Sbjct 398 IRDGAIDATIDHKNGCMVSKETGDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTH 457
Query 178 RQQTAEDDERKRAMQEE---RARAEDED 202
+++ +++ R+R QEE + AE++D
Sbjct 458 KEKESDEKRRERKQQEEELAKHMAEEDD 485
> bbo:BBOV_II001520 18.m06117; 26S proteasome non-ATPase regulatory
subunit 3; K03033 26S proteasome regulatory subunit N3
Length=512
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 126/183 (68%), Gaps = 2/183 (1%)
Query 1 RLAALKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQ 60
+LA K ++V LLMGD+P + F M L PY E+V+ V +GDL F+ V +++
Sbjct 300 KLATTKMAVIVSLLMGDVPSKSTFTNPIMKRNLEPYEEVVITVMNGDLIEFSKVCGKYKT 359
Query 61 RFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILD 120
F DDT L+ RL NVI+ GLR I+L+YSRI ++ +A+KLG++S +E E + KAI D
Sbjct 360 LFEKDDTMFLISRLRHNVIKGGLRKINLAYSRIPIEKVAQKLGINSVEETECIIAKAISD 419
Query 121 RVIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGSTE--R 178
+I+A+I H++++++SKA+V+LY S +P AF++RI FCL L+++A++AM+YP + R
Sbjct 420 GIIEATIHHEEKYMESKANVNLYTSEQPMMAFNKRINFCLKLHSNAIQAMRYPDEPDITR 479
Query 179 QQT 181
QT
Sbjct 480 HQT 482
> ath:AT1G75990 26S proteasome regulatory subunit S3, putative
(RPN3); K03033 26S proteasome regulatory subunit N3
Length=487
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 140/208 (67%), Gaps = 6/208 (2%)
Query 1 RLAALKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQ 60
R+ K I+V LL+G+IPER +F ++ M L PY E+ AVR GDL F + ++ +
Sbjct 277 RIQCNKWAIIVRLLLGEIPERSIFTQKGMEKTLRPYFELTNAVRIGDLELFGKIQEKFAK 336
Query 61 RFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAK---EAEAVAGKA 117
F D T+ L+ RL NVIR GLR IS+SYSRI L+D+A+KL L+SA +AE++ KA
Sbjct 337 TFAEDRTHNLIVRLRHNVIRTGLRNISISYSRISLQDVAQKLRLNSANPVADAESIVAKA 396
Query 118 ILDRVIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGSTE 177
I D IDA+IDH + SK + D+Y++NEPQ AF+ RI FCL+++N+AV+A+++P +T
Sbjct 397 IRDGAIDATIDHKNGCMVSKETGDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTH 456
Query 178 RQQTAEDDERKRAMQEE---RARAEDED 202
R++ +E+ R+ QEE + AE++D
Sbjct 457 REKESEEKRREMKQQEEELAKYMAEEDD 484
> tpv:TP04_0438 proteasome regulatory component; K03033 26S proteasome
regulatory subunit N3
Length=510
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 131/209 (62%), Gaps = 9/209 (4%)
Query 1 RLAALKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQ 60
+L A K ++V LLM DIP + +F +M +L PY IV+AVR+GDL F + ++ +
Sbjct 303 KLLATKMSVIVGLLMCDIPSKSVFTNPSMRRDLTPYESIVVAVRNGDLSVFLQLCDKYAR 362
Query 61 RFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILD 120
F DDT L+ RL NVI+ GLR I+L+YS+I L ++A KLGL S + E + KAI D
Sbjct 363 CFVKDDTMFLISRLRDNVIKGGLRKINLAYSKINLANVAHKLGLKSVEHTENIIAKAIHD 422
Query 121 RVIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGSTERQQ 180
+I+A IDH+ Q + SK +VDLY S EP +AFH+RI FCL L+++A++AM+YP E +
Sbjct 423 GIIEAVIDHENQCVNSKVNVDLYKSYEPMRAFHKRIQFCLKLHSNAIQAMRYPEDPEVTK 482
Query 181 TAEDDERKRAMQEERARAE----DEDLGD 205
E K ++ + E D +LGD
Sbjct 483 -----ETKTTSNPDKDQLESLDYDNELGD 506
> cpv:cgd8_4060 26S proteasomal subunit S3; PINT domain containing
protein ; K03033 26S proteasome regulatory subunit N3
Length=551
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 124/206 (60%), Gaps = 0/206 (0%)
Query 2 LAALKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQR 61
L+ K IVV++LMG++P+R +FN ++ LVPY E+V AVRSGD+ F LQ+ +
Sbjct 345 LSVQKFAIVVQMLMGEVPDRSIFNSTDLRKGLVPYLELVKAVRSGDMKEFDLNLQKRGKI 404
Query 62 FRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILDR 121
+ D T +L+ RL NVIR+GL+ I SY+RIYL DIAK G D++ + E V KAILD+
Sbjct 405 YERDGTLSLIKRLAHNVIRSGLKTICSSYNRIYLDDIAKYFGWDNSHDVEGVVSKAILDK 464
Query 122 VIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGSTERQQT 181
V+DA I+ D + L+S+ + Y S H RI F L L ++A+KAM+YP +
Sbjct 465 VVDAKINDDIKCLESQHKCETYGSESMLNNLHSRIAFSLLLRSNAIKAMEYPQNMPINNE 524
Query 182 AEDDERKRAMQEERARAEDEDLGDDM 207
DDE R + +E A + D M
Sbjct 525 NNDDEEARRLSQEEIEAAVNSVDDGM 550
> sce:YER021W RPN3, SUN2; Essential, non-ATPase regulatory subunit
of the 26S proteasome lid, similar to the p58 subunit of
the human 26S proteasome; temperature-sensitive alleles cause
metaphase arrest, suggesting a role for the proteasome in
cell cycle control; K03033 26S proteasome regulatory subunit
N3
Length=523
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Query 11 VELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQRFRLDDTYTL 70
++LLMGDIPE F++ NM L+PY + AV+ GDL F S + +++Q DDTY L
Sbjct 320 IQLLMGDIPELSFFHQSNMQKSLLPYYHLTKAVKLGDLKKFTSTITKYKQLLLKDDTYQL 379
Query 71 LCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILDRVIDASIDHD 130
RL NVI+ G+RIISL+Y +I L+DI KL LDS + E + +AI D VI+A I+H+
Sbjct 380 CVRLRSNVIKTGIRIISLTYKKISLRDICLKLNLDSEQTVEYMVSRAIRDGVIEAKINHE 439
Query 131 KQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGSTERQQTAEDDERKRA 190
F+++ +++Y S +PQ+ F RI F L+++ + +M+YP + QQ K
Sbjct 440 DGFIETTELLNIYDSEDPQQVFDERIKFANQLHDEYLVSMRYPEDKKTQQN-----EKSE 494
Query 191 MQEERARAEDEDLGDDM 207
E D DL DDM
Sbjct 495 NGENDDDTLDGDLMDDM 511
> cel:C30C11.2 rpn-3; proteasome Regulatory Particle, Non-ATPase-like
family member (rpn-3); K03033 26S proteasome regulatory
subunit N3
Length=504
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query 3 AALKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQRF 62
A K +V+ LL G+IP+R +F + L Y ++ VR GD+ F L+Q + +F
Sbjct 295 AVQKWVVVIGLLQGEIPDRSVFRQPIYRKCLAHYLDLSRGVRDGDVARFNHNLEQFKTQF 354
Query 63 RLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILDRV 122
DDT TL+ RL QNVI+ ++ ISL+YSRIY+KDIAKKL + + E E + KAI D
Sbjct 355 EADDTLTLIVRLRQNVIKTAIKQISLAYSRIYIKDIAKKLYITNETETEYIVAKAIADGA 414
Query 123 IDASIDHD----KQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGSTER 178
IDA I D +++QS + D+Y ++EPQ F RI +CL+L+N AVKA++YP +
Sbjct 415 IDAVITSDVRDGPRYMQSSETADIYRTSEPQAHFDTRIRYCLELHNQAVKALRYPPKKKI 474
Query 179 QQTAEDDERKRAMQEERARAEDEDLGDD 206
+ R+R QE E D DD
Sbjct 475 AVETIEQAREREQQELEFAKELADEDDD 502
> ath:AT2G19560 EER5; EER5 (ENHANCED ETHYLENE RESPONSE 5)
Length=413
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query 5 LKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQRFRL 64
LK + V+L +G IP+ L N+H Y +IV A+R GDL LQ+HE RF
Sbjct 258 LKYLVPVKLSLGIIPKDELLRNYNLHE----YTKIVQALRKGDLRLLRHALQEHEDRFLR 313
Query 65 DDTYTLLCRLHQNV 78
Y +L +L V
Sbjct 314 SGVYLVLEKLELQV 327
> xla:379813 cops3, MGC53451; COP9 constitutive photomorphogenic
homolog subunit 3; K12177 COP9 signalosome complex subunit
3
Length=423
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query 2 LAALKKCIVVELLM-GDIPERPLFNKQNMHAELVP----YREIVLAVRSGDLHAFASVLQ 56
L A KK I+V L++ G + + P + Q + + P Y E+ + + +++
Sbjct 221 LEAYKKYILVSLILHGKVQQLPKYTSQVVGRFIKPLSNAYHELAQVYSTNNPAELRNLVS 280
Query 57 QHEQRFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGK 116
+H + F D+ L+ + ++ + ++ ++ ++ + L+D+A ++ L A+EAE
Sbjct 281 KHNETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGAQEAEKYVLY 340
Query 117 AILDRVIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAM 170
I D I ASI+ + S + Y + + + C+DL +D +KAM
Sbjct 341 MIEDGEIFASINQKDGMVCFHDSPEKYNNPAMLHNIDQEMLRCIDL-DDRLKAM 393
> hsa:8533 COPS3, CSN3, SGN3; COP9 constitutive photomorphogenic
homolog subunit 3 (Arabidopsis); K12177 COP9 signalosome
complex subunit 3
Length=403
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query 2 LAALKKCIVVEL-LMGDIPERPLFNKQNMHAELVP----YREIVLAVRSGDLHAFASVLQ 56
L + KK I+V L L+G + + P + Q + + P Y E+ + + +++
Sbjct 201 LESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVN 260
Query 57 QHEQRFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGK 116
+H + F D+ L+ + ++ + ++ ++ ++ + L+D+A ++ L +EAE
Sbjct 261 KHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLH 320
Query 117 AILDRVIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGST 176
I D I ASI+ Q V + + P+K YN+ AM +
Sbjct 321 MIEDGEIFASIN------QKDGMVSFH--DNPEK------------YNNP--AMLHNIDQ 358
Query 177 ERQQTAEDDERKRAMQEE 194
E + E DER +AM +E
Sbjct 359 EMLKCIELDERLKAMDQE 376
> mmu:26572 Cops3, Csn3, Sgn3; COP9 (constitutive photomorphogenic)
homolog, subunit 3 (Arabidopsis thaliana); K12177 COP9
signalosome complex subunit 3
Length=423
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query 2 LAALKKCIVVEL-LMGDIPERPLFNKQNMHAELVP----YREIVLAVRSGDLHAFASVLQ 56
L + KK I+V L L+G + + P + Q + + P Y E+ + + +++
Sbjct 221 LESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVS 280
Query 57 QHEQRFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGK 116
+H + F D+ L+ + ++ + ++ ++ ++ + L+D+A ++ L +EAE
Sbjct 281 KHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLH 340
Query 117 AILDRVIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGST 176
I D I ASI+ Q V + + P+K YN+ AM +
Sbjct 341 MIEDGEIFASIN------QKDGMVSFH--DNPEK------------YNNP--AMLHNIDQ 378
Query 177 ERQQTAEDDERKRAMQEE 194
E + E DER +AM +E
Sbjct 379 EMLKCIELDERLKAMDQE 396
> dre:100334543 COP9 signalosome complex subunit 3-like
Length=418
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query 2 LAALKKCIVVELLM-GDIPERPLFNKQNMHAELVP----YREIVLAVRSGDLHAFASVLQ 56
L A KK I+V L++ G + + P + Q + + P Y E+ + + +++
Sbjct 243 LEAYKKYILVSLILHGKVQQLPKYTSQIVGRFIKPLSNAYHELAQIYATNNPAELRALVN 302
Query 57 QHEQRFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGK 116
+H + F D+ L+ + ++ + ++ ++ ++ + L+D+A ++ L +EAE
Sbjct 303 KHSETFTRDNNTGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLH 362
Query 117 AILDRVIDASID 128
I D I ASI+
Sbjct 363 MIEDGEIYASIN 374
> dre:335720 cops3, wu:fc32a02, wu:fk59f01, zgc:111903, zgc:55643,
zgc:77615; COP9 constitutive photomorphogenic homolog subunit
3; K12177 COP9 signalosome complex subunit 3
Length=423
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query 2 LAALKKCIVVELLM-GDIPERPLFNKQNMHAELVP----YREIVLAVRSGDLHAFASVLQ 56
L A KK I+V L++ G + + P + Q + + P Y E+ + + +++
Sbjct 221 LEAYKKYILVSLILHGKVQQLPKYTSQIVGRFIKPLSNAYHELAQIYATNNPAELRALVN 280
Query 57 QHEQRFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGK 116
+H + F D+ L+ + ++ + ++ ++ ++ + L+D+A ++ L +EAE
Sbjct 281 KHSETFTRDNNSGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLH 340
Query 117 AILDRVIDASID 128
I D I ASI+
Sbjct 341 MIEDGEIYASIN 352
> hsa:5718 PSMD12, MGC75406, Rpn5, p55; proteasome (prosome, macropain)
26S subunit, non-ATPase, 12; K03035 26S proteasome
regulatory subunit N5
Length=456
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query 15 MGDIPERPLFNKQNMHAELVPYREIV----LAVRSGDLHA-----FASVLQQHEQRFRLD 65
+ +IP+ K EL+ + +V + +R G L + F S ++ E+R++
Sbjct 296 LEEIPKYKDLLKLFTTMELMRWSTLVEDYGMELRKGSLESPATDVFGST-EEGEKRWK-- 352
Query 66 DTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILDRVIDA 125
L V+ +RI++ Y+RI +K +A+ L L S E+EA ++++ I A
Sbjct 353 -------DLKNRVVEHNIRIMAKYYTRITMKRMAQLLDL-SVDESEAFLSNLVVNKTIFA 404
Query 126 SID 128
+D
Sbjct 405 KVD 407
> bbo:BBOV_III003080 17.m10673; hypothetical protein
Length=418
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query 5 LKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQRFRL 64
L+ +VV + +G +P L K ++ A Y +I+ AV+ GD+ F +++H F
Sbjct 264 LECIVVVRIGLGKLPSMQLLQKYDLGA----YCDIIRAVKLGDIKLFTETIERHFDTFTS 319
Query 65 DDTYTLLC 72
T+LC
Sbjct 320 QG--TVLC 325
> mmu:66997 Psmd12, 1500002F15Rik, AI480719, P55; proteasome (prosome,
macropain) 26S subunit, non-ATPase, 12; K03035 26S
proteasome regulatory subunit N5
Length=456
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query 74 LHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILDRVIDASID 128
L V+ +RI++ Y+RI +K +A+ L L S E+EA ++++ I A +D
Sbjct 354 LKSRVVEHNIRIMAKYYTRITMKRMAQLLDL-SVDESEAFLSNLVVNKTIFAKVD 407
> xla:431923 hypothetical protein MGC81129; K03035 26S proteasome
regulatory subunit N5
Length=441
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query 15 MGDIPERPLFNKQNMHAELVPYREIV----LAVRSGDLHAFA----SVLQQHEQRFRLDD 66
+ DIP+ K EL+ + +V +R G L + A S ++ E+R++
Sbjct 281 LEDIPKYKDLLKLFTTMELMRWSMLVEDYGKELREGSLDSTATDVFSYTEEGEKRWK--- 337
Query 67 TYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILDRVIDAS 126
L V+ +RI++ Y+RI +K +A+ L L S E+E ++++ I A
Sbjct 338 ------DLKNRVVEHNIRIMAKYYTRITMKRMAQLLDL-SVNESEEFLSSLVVNKTIYAK 390
Query 127 ID 128
+D
Sbjct 391 VD 392
> tpv:TP02_0358 hypothetical protein
Length=424
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query 9 IVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQRFRLDDTY 68
IVV L +G +P L K N L Y EIV ++ GD+ F + L + + F +
Sbjct 276 IVVRLGLGKMPPEYLLEKYN----LTHYSEIVKSIVLGDVERFNNTLDNYFEDFIKEG-- 329
Query 69 TLLC 72
T+LC
Sbjct 330 TILC 333
> xla:734284 pcid2, MGC84981; PCI domain containing 2
Length=399
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query 11 VELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQRFRLDDTYTL 70
V++L+G +P L K +L+ + E+ AV G+L L +HE T+ +
Sbjct 258 VKMLLGHMPTIHLLKKY----DLMQFAEVTKAVSEGNLLLLTEALTKHE-------TFFI 306
Query 71 LCRLHQNVIRAGLRIISLS--YSRIYLKDIAKKLGLDS 106
C + +I L+IIS + ++YL +L LD+
Sbjct 307 RCGIF--LILEKLKIISYRNLFKKVYLLLKTHQLSLDA 342
> bbo:BBOV_III006050 17.m07534; hypothetical protein
Length=329
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query 5 LKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQRFRL 64
L+ +VV + +G +P L K ++ A Y +I+ AVR GD+ F ++++ F
Sbjct 175 LECIVVVRIGLGKLPPIQLLQKYDLGA----YCDIIRAVRLGDIKLFTETIERYFDTF-- 228
Query 65 DDTYTLLC 72
T+LC
Sbjct 229 TSQGTVLC 236
> dre:559762 DnaJ homolog subfamily C member 16-like; K09536 DnaJ
homolog subfamily C member 16
Length=777
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query 105 DSAKEAEAVAGKAILDRVIDASIDHDKQFLQSK-ASVDLYASNEPQKAFHRRITFCLDL 162
D K A+ + K + ++ID I ++K L + + L+ P K FHRR +C+ L
Sbjct 329 DVEKPADIIQAKGMKKQIIDEFISNNKFLLAPRLVNQKLFDELCPVKQFHRRRKYCILL 387
> bbo:BBOV_IV008290 23.m05745; hypothetical protein
Length=447
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query 104 LDSAKEAEAVAGKAILDRVIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRIT 157
L S + ++ AG +ILDR +ASI LQ+K + + + N A RR T
Sbjct 186 LISGRSSQIAAGSSILDRSANASITSQNSVLQTK-TASIVSGNLSIDAVERRPT 238
> xla:399245 psmd12, MGC80339; proteasome (prosome, macropain)
26S subunit, non-ATPase, 12; K03035 26S proteasome regulatory
subunit N5
Length=441
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query 15 MGDIPERPLFNKQNMHAELVPYREIV----LAVRSGDLHAFA----SVLQQHEQRFRLDD 66
+ DIP+ K EL+ + +V +R G L + A S ++ E+R++
Sbjct 281 LEDIPKYKDLLKLFTTMELMRWSTLVEDYGKELREGSLDSTATDVFSYSEEGEKRWK--- 337
Query 67 TYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILDRVIDAS 126
L V+ +RI++ Y+RI +K +A+ L L S E+E ++++ I A
Sbjct 338 ------DLKNRVVEHNIRIMAKYYTRITMKRMAQLLDL-SIDESEEFLSSLVVNKTIYAK 390
Query 127 ID 128
+D
Sbjct 391 VD 392
> dre:796199 fat-like
Length=2659
Score = 30.0 bits (66), Expect = 6.6, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query 36 YREIVLAVRSGDLHAFASVLQQ------HEQRFRLDDTYTLLCRLHQNVIRAGLRIISLS 89
Y E+ LAV SGDL S+ Q+ E + Y+L+ + + + + R+ S
Sbjct 119 YGEVELAVTSGDLENKFSINQEGTLCLIAELDRETNAMYSLIVQANDHALPTETRLSSSV 178
Query 90 YSRIYLKDI 98
+ IYLKD+
Sbjct 179 HVTIYLKDV 187
Lambda K H
0.321 0.135 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 6559193640
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40