bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_4190_orf1 Length=256 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_001680 eukaryotic translation initiation factor 3 s... 77.0 6e-14 tpv:TP01_0235 eukaryotic translation initiation factor 3 subun... 51.6 3e-06 pfa:PF13_0198 PfRh2a; reticulocyte binding protein 2 homolog A... 48.9 2e-05 bbo:BBOV_IV005090 23.m05782; translation initiation factor 3 s... 47.0 7e-05 pfa:PFL0625c eukaryotic translation initiation factor 3 subuni... 35.4 0.22 > tgo:TGME49_001680 eukaryotic translation initiation factor 3 subunit 10, putative (EC:3.1.2.15); K03254 translation initiation factor 3 subunit A Length=1033 Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/105 (47%), Positives = 75/105 (71%), Gaps = 0/105 (0%) Query 2 TREDKQQWVARQLQQRQQQFAAAAAAQRQRLLQMLQLQKVQRARERMEAAIRRQRELEEQ 61 +EDK++WVA ++ RQ+ F A QR+RLL +L+ K+QRAR R E +++ + E+ Sbjct 792 VKEDKEKWVAEKIAVRQKDFEQQAQEQRERLLHVLRQAKIQRARARKEEHLKKLKIEVER 851 Query 62 RKKEEEFKRQMEEMERQKAEAEAREKRLQEIAEKQRQRELEIEAK 106 ++ EEE K+ +E++E+++ E EA+ KRL E AEKQRQRELEIE K Sbjct 852 KRMEEEQKKYLEQLEKKRQEEEAKAKRLAEQAEKQRQRELEIEEK 896 > tpv:TP01_0235 eukaryotic translation initiation factor 3 subunit 10; K03254 translation initiation factor 3 subunit A Length=1107 Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 40/167 (23%) Query 6 KQQWVARQLQQRQQQFAAAAAAQRQRLLQMLQLQKVQRARERMEAAIRRQRELE------ 59 KQQWV +QLQ R+++ + AQ R +ML +K+ RA+ R + Q LE Sbjct 808 KQQWVEKQLQSRKKEHQSKVDAQNARFKKMLVEEKIARAKMRYN---QEQLRLEQKRKEE 864 Query 60 ----EQRKKEEEF----KRQMEEMERQKAEAEAREKRLQEIAEKQRQRELEIEAKHGLAN 111 EQ++KEEE KR+ EE+ R++ E E +RL EIAE QRQ++LEIE Sbjct 865 QLRLEQKRKEEELRLEQKRKEEEL-RKRREQELHRQRLDEIAEIQRQKQLEIE------- 916 Query 112 REGSRRADSQSLSHKSESPAGSSSSSSNSGQPVSPTGSRDQQQQQQQ 158 RR A +++ + NSG S + ++D + Q+ Sbjct 917 ----RRL-----------AATNNTVTVNSGYGFSNSVNKDVGRNYQK 948 > pfa:PF13_0198 PfRh2a; reticulocyte binding protein 2 homolog A; K13849 reticulocyte-binding protein Length=3130 Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 71/119 (59%), Gaps = 10/119 (8%) Query 6 KQQWVARQLQQRQQQFAAAAAAQRQRLLQMLQLQKVQRARERMEAAIRRQRELEEQRKKE 65 K++ + RQ Q+R Q+ A +++RL + +L++ + +ER+E RE +EQ +KE Sbjct 2771 KEEELKRQEQERLQKEEALKRQEQERLQKEEELKR--QEQERLE------REKQEQLQKE 2822 Query 66 EEFKRQMEE-MERQKAEAEAREKRLQEIAEKQRQRELEIEAKH-GLANREGSRRADSQS 122 EE KRQ +E +++++A ++RLQ+ E +RQ + +E K LA RE ++ +S Sbjct 2823 EELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIELAEREQHIKSKLES 2881 Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 23/141 (16%) Query 38 LQKVQRARERMEAAIRRQ------RELEEQRKKEEEFKRQMEE-MERQKAEAEAREKRLQ 90 L++ ++ R + E ++RQ RE +EQ +KEEE KRQ +E +++++A ++RLQ Sbjct 2739 LKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQ 2798 Query 91 EIAE--KQRQRELEIEAKHGLANREGSRRADSQSLSHKSESPAGSSSSSSNSGQPVSPTG 148 + E +Q Q LE E + L E +R + + L K E+ Sbjct 2799 KEEELKRQEQERLEREKQEQLQKEEELKRQEQERL-QKEEALKRQEQ------------- 2844 Query 149 SRDQQQQQQQQQQQQQLEWRR 169 R Q++++ ++Q+Q++LE ++ Sbjct 2845 ERLQKEEELKRQEQERLERKK 2865 Score = 44.3 bits (103), Expect = 5e-04, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 9/126 (7%) Query 10 VARQLQQRQQQFAAAAAAQRQRL--LQMLQLQKVQ----RARERMEAAIRRQRELEEQRK 63 + RQ Q+R Q+ +++RL + QLQK + + +ER++ +R+ +E+ + Sbjct 2739 LKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQ 2798 Query 64 KEEEFKRQMEE-MERQKAEAEAREKRL--QEIAEKQRQRELEIEAKHGLANREGSRRADS 120 KEEE KRQ +E +ER+K E +E+ L QE Q++ L+ + + L E +R + Sbjct 2799 KEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQ 2858 Query 121 QSLSHK 126 + L K Sbjct 2859 ERLERK 2864 Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 71/129 (55%), Gaps = 3/129 (2%) Query 3 REDKQQWVARQLQQRQQQFAAAAAAQRQRLLQMLQLQKVQRARERMEAAIRRQRELEEQR 62 + +Q+ + R+ Q++ Q+ +++RL + L++ ++ R + E ++RQ + +R Sbjct 2754 KRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLER 2813 Query 63 KKEEEFKRQMEEMERQKAEAEAREKRL--QEIAEKQRQRELEIEAKHGLANREGSRRADS 120 +K+E+ +++ EE++RQ+ E +E+ L QE Q++ EL+ + + L ++ Sbjct 2814 EKQEQLQKE-EELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIELAERE 2872 Query 121 QSLSHKSES 129 Q + K ES Sbjct 2873 QHIKSKLES 2881 > bbo:BBOV_IV005090 23.m05782; translation initiation factor 3 subunit 10; K03254 translation initiation factor 3 subunit A Length=991 Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/99 (44%), Positives = 68/99 (68%), Gaps = 0/99 (0%) Query 5 DKQQWVARQLQQRQQQFAAAAAAQRQRLLQMLQLQKVQRARERMEAAIRRQRELEEQRKK 64 +K++W+ + +RQ + A QR+R ++L K+QRARER + +RRQ+ELEE+R + Sbjct 804 EKEKWINDTMARRQAIYDAEIEEQRKRFTEILIKDKIQRARERRDYELRRQKELEEERIR 863 Query 65 EEEFKRQMEEMERQKAEAEAREKRLQEIAEKQRQRELEI 103 EEE R+ E +R++ E R+++L EIAEKQR +ELEI Sbjct 864 EEERMRREMEEKRKQEEEAERKRKLMEIAEKQRAKELEI 902 > pfa:PFL0625c eukaryotic translation initiation factor 3 subunit 10, putative; K03254 translation initiation factor 3 subunit A Length=1377 Score = 35.4 bits (80), Expect = 0.22, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 74/120 (61%), Gaps = 1/120 (0%) Query 5 DKQQWVARQLQQRQQQFAAAAAAQRQRLLQMLQLQKVQRARERMEAAIRRQRELEEQRKK 64 D +++ +++ R ++F AQ++RL +L+ +K+QRA+ER + IR+ + EE++++ Sbjct 910 DIEEFTKNEMKLRVEEFEKNLKAQKERLYNILKEEKIQRAKERRDQHIRKLKAEEERKRR 969 Query 65 EEEFKRQMEEMERQKAEAEAREKRLQEIAEKQRQRELEIEAKHGLANREGSRRADSQSLS 124 EEE + ++ + E ++ + E K+L+EI++ QR+R+LE++ + E R S S Sbjct 970 EEE-EERLLKEEMERKKKEEARKKLEEISKAQRERDLEMDLQMKRKKEESRRSERSHRKS 1028 Lambda K H 0.308 0.118 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 9340616888 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40