bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_4372_orf2
Length=129
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_089530 60s ribosomal protein L19, putative ; K02885... 163 1e-40
bbo:BBOV_I003160 19.m02050; 60S ribosomal protein L19; K02885 ... 135 3e-32
ath:AT3G16780 60S ribosomal protein L19 (RPL19B); K02885 large... 126 2e-29
tpv:TP03_0163 60S ribosomal protein L19; K02885 large subunit ... 110 1e-24
ath:AT1G02780 emb2386 (embryo defective 2386); structural cons... 110 1e-24
pfa:PFF0700c 60S ribosomal protein L19, putative 109 3e-24
ath:AT4G02230 60S ribosomal protein L19 (RPL19C); K02885 large... 108 5e-24
cpv:cgd3_3790 60S ribosomal protein L19 ; K02885 large subunit... 103 1e-22
hsa:6143 RPL19, DKFZp779D216, FLJ27452, MGC71997; ribosomal pr... 97.4 1e-20
mmu:19921 Rpl19; ribosomal protein L19; K02885 large subunit r... 97.1 1e-20
xla:379959 rpl19-a, MGC53844, rpl19; ribosomal protein L19; K0... 95.5 4e-20
mmu:100045367 60S ribosomal protein L19-like 94.7 6e-20
xla:446318 rpl19-b, MGC84202; ribosomal protein L19; K02885 la... 94.7 6e-20
dre:406489 rpl19, wu:fa91e07, wu:fb12d12, zgc:77733; ribosomal... 94.4 7e-20
cel:C09D4.5 rpl-19; Ribosomal Protein, Large subunit family me... 92.4 3e-19
sce:YBR084C-A RPL19A; Rpl19ap; K02885 large subunit ribosomal ... 90.9 9e-19
sce:YBL027W RPL19B; Rpl19bp; K02885 large subunit ribosomal pr... 90.9 9e-19
mmu:100505098 60S ribosomal protein L19-like 88.6 4e-18
ath:AT4G16030 structural constituent of ribosome 32.0 0.44
pfa:PF07_0049 VAR; erythrocyte membrane protein 1, PfEMP1; K13... 31.6 0.64
hsa:83642 SELO, MGC131879; selenoprotein O 31.2 0.87
cpv:cgd6_4560 myosin'myosin' 30.8 1.0
tpv:TP04_0617 hypothetical protein 30.4 1.3
cel:F35G12.4 hypothetical protein 30.0 2.0
pfa:PFF1185w Smarca-related protein 29.6 2.4
cpv:cgd4_4040 Yer006wp-like. Yjeq GTpase ; K14538 nuclear GTP-... 29.3 2.8
dre:100150861 GTPase, IMAP family member 4-like 29.3 2.9
dre:100000683 si:ch211-131e11.19 28.1 7.1
sce:YLR383W SMC6, RHC18; Protein involved in structural mainte... 28.1 7.5
> tgo:TGME49_089530 60s ribosomal protein L19, putative ; K02885
large subunit ribosomal protein L19e
Length=187
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/114 (81%), Positives = 104/114 (91%), Gaps = 0/114 (0%)
Query 12 RHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQFK 71
RHMG GKRKGTR+ARLPAKVLWMRRQRVLRRLLKKYRD+KKI HMYH +Y+RCKGNQFK
Sbjct 73 RHMGKGKRKGTREARLPAKVLWMRRQRVLRRLLKKYRDSKKIDKHMYHSMYMRCKGNQFK 132
Query 72 NKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKLKEENKKAGFAAA 125
NKRVLIEAIHNEKNLK+KEKALQEQ++ARK KAAAQKEKR++KE K+A A+
Sbjct 133 NKRVLIEAIHNEKNLKLKEKALQEQLEARKSKAAAQKEKRRMKELKKEADSPAS 186
> bbo:BBOV_I003160 19.m02050; 60S ribosomal protein L19; K02885
large subunit ribosomal protein L19e
Length=181
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 79/100 (79%), Gaps = 0/100 (0%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RH GIGKRKGT+ AR P K+LWMRRQRVLRR+L + RD KKI SHMY Y RCKGNQF
Sbjct 72 GRHAGIGKRKGTKGARQPPKLLWMRRQRVLRRMLTRLRDTKKIDSHMYQNFYKRCKGNQF 131
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEK 110
KNKRVL+EAIHN+KN VK+KA EQ++A K KA A ++K
Sbjct 132 KNKRVLLEAIHNQKNAWVKQKAESEQIEALKAKAKAIRDK 171
> ath:AT3G16780 60S ribosomal protein L19 (RPL19B); K02885 large
subunit ribosomal protein L19e
Length=209
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 4/122 (3%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RH G GKRKGTR+ARLP K+LWMRR RVLRR L KYR++KKI HMYH +Y++ KGN F
Sbjct 73 GRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMYHDMYMKVKGNVF 132
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKLKEENKKA----GFAAAK 126
KNKRVL+E+IH K K +EK L +Q +A++ K A +E++ + E + A G
Sbjct 133 KNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREERLAQGPGGGETTT 192
Query 127 PA 128
PA
Sbjct 193 PA 194
> tpv:TP03_0163 60S ribosomal protein L19; K02885 large subunit
ribosomal protein L19e
Length=179
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 81/102 (79%), Gaps = 0/102 (0%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RH GIGKRKG++ R P K+LWMRRQRVLRRLL+K RD+KKI SHMYH Y+RCKGNQF
Sbjct 72 GRHTGIGKRKGSKGVRQPPKLLWMRRQRVLRRLLRKLRDSKKIDSHMYHNFYMRCKGNQF 131
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRK 112
KNKRVL+EAIH +KN VK+KA E V+A + K+ KEKRK
Sbjct 132 KNKRVLLEAIHAQKNAWVKQKAENELVEALRAKSKMLKEKRK 173
> ath:AT1G02780 emb2386 (embryo defective 2386); structural constituent
of ribosome; K02885 large subunit ribosomal protein
L19e
Length=214
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 82/110 (74%), Gaps = 0/110 (0%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RH G GKRKGTR+ARLP KVLWMRR RVLRRLLKKYR+ KKI HMYH +Y+R KGN F
Sbjct 73 GRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMYHDMYMRVKGNVF 132
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKLKEENKKA 120
KNKRVL+E+IH K K +EK L +Q +A++ K A +E++ + E + A
Sbjct 133 KNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERLA 182
> pfa:PFF0700c 60S ribosomal protein L19, putative
Length=182
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 85/106 (80%), Gaps = 0/106 (0%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RHMGIGKRKGT++AR K LW++RQRVLRRLLK+ RD+KK+ H+YH Y++CKGNQF
Sbjct 72 GRHMGIGKRKGTKNARTNQKTLWIKRQRVLRRLLKRLRDSKKVDRHLYHSFYLKCKGNQF 131
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKLKEE 116
KNKR LIEAI EKN +K+KA+ +Q++A++ KA + KRKLK++
Sbjct 132 KNKRTLIEAIQREKNETLKKKAIADQLEAKRLKAQVLRNKRKLKKD 177
> ath:AT4G02230 60S ribosomal protein L19 (RPL19C); K02885 large
subunit ribosomal protein L19e
Length=208
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 82/110 (74%), Gaps = 0/110 (0%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RH G GKRKGTR+ARLP KVLWMRR RVLRRLLKKYR+ KKI HMYH +Y++ KGN F
Sbjct 73 GRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMYHDMYMKVKGNVF 132
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKLKEENKKA 120
KNKRVL+E+IH K K +EK L +Q +A++ K A +E++ + E + A
Sbjct 133 KNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERLA 182
> cpv:cgd3_3790 60S ribosomal protein L19 ; K02885 large subunit
ribosomal protein L19e
Length=175
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 84/103 (81%), Gaps = 0/103 (0%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
R MG+GKR+GT+DAR P KVLWMRRQRVLRRLL+KYR++ KI MY + Y++ KGNQ+
Sbjct 71 GRSMGLGKRRGTKDARRPEKVLWMRRQRVLRRLLRKYRESGKINKTMYKQFYLKSKGNQY 130
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKL 113
KNKRVLIEAIH K +KEKALQ+Q+DARK +AA K+KRK+
Sbjct 131 KNKRVLIEAIHIAKAEHLKEKALQDQLDARKARAANLKQKRKV 173
> hsa:6143 RPL19, DKFZp779D216, FLJ27452, MGC71997; ribosomal
protein L19; K02885 large subunit ribosomal protein L19e
Length=196
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 80/106 (75%), Gaps = 3/106 (2%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RHMGIGKRKGT +AR+P KV WMRR R+LRRLL++YR++KKI HMYH LY++ KGN F
Sbjct 73 GRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVF 132
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKLKEE 116
KNKR+L+E IH K K ++K L +Q +AR+ K KE RK +EE
Sbjct 133 KNKRILMEHIHKLKADKARKKLLADQAEARRSKT---KEARKRREE 175
> mmu:19921 Rpl19; ribosomal protein L19; K02885 large subunit
ribosomal protein L19e
Length=194
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 80/106 (75%), Gaps = 3/106 (2%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RHMGIGKRKGT +AR+P KV WMRR R+LRRLL++YR++KKI HMYH LY++ KGN F
Sbjct 71 GRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVF 130
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKLKEE 116
KNKR+L+E IH K K ++K L +Q +AR+ K KE RK +EE
Sbjct 131 KNKRILMEHIHKLKADKARKKLLADQAEARRSKT---KEARKRREE 173
> xla:379959 rpl19-a, MGC53844, rpl19; ribosomal protein L19;
K02885 large subunit ribosomal protein L19e
Length=197
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 80/106 (75%), Gaps = 3/106 (2%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RHMGIGKRKGT +AR+P K+ WMRR R+LRRLL++YR++KKI HMYH LY++ KGN F
Sbjct 73 GRHMGIGKRKGTANARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVF 132
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKLKEE 116
KNKR+L+E IH K K ++K L +Q +AR+ K KE RK +EE
Sbjct 133 KNKRILMEHIHKLKADKARKKLLADQAEARRSKT---KEARKRREE 175
> mmu:100045367 60S ribosomal protein L19-like
Length=128
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 79/106 (74%), Gaps = 3/106 (2%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RHMGIGKRKGT +AR+P KV WMRR R+LRRLL++YR++KKI MYH LY++ KGN F
Sbjct 5 GRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRRMYHSLYLKVKGNMF 64
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKLKEE 116
KNKR+L+E IH K K ++K L +Q +AR+ K KE RK +EE
Sbjct 65 KNKRILMEHIHKLKADKARKKLLADQAEARRSKT---KEARKRREE 107
> xla:446318 rpl19-b, MGC84202; ribosomal protein L19; K02885
large subunit ribosomal protein L19e
Length=312
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 79/104 (75%), Gaps = 3/104 (2%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RH G GKRKGT +AR+P KVLWMRR RVLRRLLK+YR+A KI H+YH LY +CKGNQF
Sbjct 73 GRHTGPGKRKGTANARMPEKVLWMRRMRVLRRLLKRYREAHKIDKHLYHHLYQQCKGNQF 132
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDA---RKQKAAAQKEKR 111
+NKRVLIE IH +K +++ K L +Q +A RK+ A ++EKR
Sbjct 133 RNKRVLIEHIHKKKAERLRAKQLSDQAEAMRQRKRDARIRREKR 176
> dre:406489 rpl19, wu:fa91e07, wu:fb12d12, zgc:77733; ribosomal
protein L19; K02885 large subunit ribosomal protein L19e
Length=196
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 73/94 (77%), Gaps = 0/94 (0%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RHMG+GKRKGT +AR+P K+ WMRR R+LRRLL++YR+AKKI HMYH LY+R KGN F
Sbjct 73 GRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMYHSLYLRAKGNVF 132
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKA 104
KNKR+L+E IH K K ++K L +Q +AR+ K
Sbjct 133 KNKRILMEHIHKLKADKARKKLLADQAEARRTKT 166
> cel:C09D4.5 rpl-19; Ribosomal Protein, Large subunit family
member (rpl-19); K02885 large subunit ribosomal protein L19e
Length=198
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 74/106 (69%), Gaps = 3/106 (2%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RH G GKR+GT +AR+P K LW+RR RVLR LL++YRDAKK+ H+YH+LY+R KGN F
Sbjct 73 GRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGNNF 132
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKLKEE 116
KNK+ LIE I +K + K L +Q AR+ K KE RK +EE
Sbjct 133 KNKKNLIEYIFKKKTENKRAKQLADQAQARRDK---NKESRKRREE 175
> sce:YBR084C-A RPL19A; Rpl19ap; K02885 large subunit ribosomal
protein L19e
Length=189
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 68/93 (73%), Gaps = 0/93 (0%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RH G GKRKGTR+ARLP++V+W+RR RVLRRLL KYRDA KI H+YH LY KGN F
Sbjct 73 GRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAF 132
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQK 103
K+KR L+E I K +EKAL E+ +AR+ K
Sbjct 133 KHKRALVEHIIQAKADAQREKALNEEAEARRLK 165
> sce:YBL027W RPL19B; Rpl19bp; K02885 large subunit ribosomal
protein L19e
Length=189
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 68/93 (73%), Gaps = 0/93 (0%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
RH G GKRKGTR+ARLP++V+W+RR RVLRRLL KYRDA KI H+YH LY KGN F
Sbjct 73 GRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAF 132
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQK 103
K+KR L+E I K +EKAL E+ +AR+ K
Sbjct 133 KHKRALVEHIIQAKADAQREKALNEEAEARRLK 165
> mmu:100505098 60S ribosomal protein L19-like
Length=177
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 77/106 (72%), Gaps = 3/106 (2%)
Query 11 SRHMGIGKRKGTRDARLPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQF 70
R+MGIGKRKG+ AR+P KV WMRR R+LRRLL++YR++KKI H YH LY++ KGN F
Sbjct 54 GRNMGIGKRKGSASARMPEKVTWMRRMRILRRLLRRYRESKKIDRHRYHSLYLKVKGNVF 113
Query 71 KNKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKLKEE 116
KNKR+L+E IH K K +K L +Q +AR+ K KE RK +EE
Sbjct 114 KNKRILMEHIHKLKADKAHKKLLADQAEARRSK---NKEARKCQEE 156
> ath:AT4G16030 structural constituent of ribosome
Length=114
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query 58 YHKLYVRCKGNQFKNKRVLIEAIHN---EKNLKVKEKALQEQVDARKQKAAAQ 107
YH ++++ KG +KNK VL+E++H E+ E L + + K +A Q
Sbjct 62 YHDMFMKVKGKVYKNKCVLMESMHKSSRERKFSGSEMRLALEPEGEKTASAPQ 114
> pfa:PF07_0049 VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2275
Score = 31.6 bits (70), Expect = 0.64, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query 45 KKYRDAKKIVSHMYHKLYVRCKGNQFKN------KRVLIEAIHNEKNLKVKEKALQEQVD 98
KK ++ KI +H Y + +G FK K+VL E + EK+ + Q +D
Sbjct 705 KKEQEWMKIRNHFYTQEIKGFQGELFKLSHDDLLKQVLKEEFYKEKSEDASAQDNQNSLD 764
Query 99 ARKQKAAAQKEKRKLKEENKKAGFAA 124
A + K Q K EEN++AG A
Sbjct 765 AEEAKELKQLSKIIESEENQEAGAGA 790
> hsa:83642 SELO, MGC131879; selenoprotein O
Length=669
Score = 31.2 bits (69), Expect = 0.87, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 0/42 (0%)
Query 72 NKRVLIEAIHNEKNLKVKEKALQEQVDARKQKAAAQKEKRKL 113
N R L EA+ E L++ E L E+ DA Q+ QK +RKL
Sbjct 385 NLRKLAEALQPELPLELGEAILAEEFDAEFQRHYLQKMRRKL 426
> cpv:cgd6_4560 myosin'myosin'
Length=1924
Score = 30.8 bits (68), Expect = 1.0, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query 27 LPAKVLWMRRQRVLRRLLKKYRDAKKIVSHMYHKL------YVRCKGNQFKNKRVLIEAI 80
L A++LW R ++ RR +K ++ K S ++ K + KGN + + L +A+
Sbjct 1054 LKAQILW--RGKLARRQFQKLKEEKNEFSELFAKYQEALIEIQKLKGNCSRLEDQLYKAL 1111
Query 81 HNEKNLKVKEKALQEQVDARKQK 103
+LK + + L +++ ARK +
Sbjct 1112 SERNSLKDEREQLNQELLARKTE 1134
> tpv:TP04_0617 hypothetical protein
Length=219
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 0/43 (0%)
Query 33 WMRRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQFKNKRV 75
W ++R LRRL +A+K +S + + + N FKN R+
Sbjct 137 WSGKERDLRRLKADLTNAQKTISQLQNDINYLKSDNDFKNTRI 179
> cel:F35G12.4 hypothetical protein
Length=697
Score = 30.0 bits (66), Expect = 2.0, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query 51 KKIVSHMYHKLYVRCKGNQFKNKRVL------------IEAIHNEKNLKVKEKALQEQVD 98
KK++ H+Y K+ G F+NK++L + IH + + ++ L+ +D
Sbjct 615 KKVMEHVYEKILSTNDGKVFRNKKILMVFEDITVGSIPLNQIHTKMEMYCNDQRLEPDMD 674
Query 99 ARKQKAAAQKEKRKL 113
R K K+ +L
Sbjct 675 LRTVKHLYWKQSGEL 689
> pfa:PFF1185w Smarca-related protein
Length=2719
Score = 29.6 bits (65), Expect = 2.4, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query 64 RCKG--NQFKNKRVLIEAIHNEKNLKVKEKAL-----QEQVDARKQKAAAQKEKRKLKEE 116
+CK Q K +++ E NEK L+ + ++ QE+++A+K+K A Q E+ K E
Sbjct 1563 KCKAVEEQKKRRKMTKEERENEKQLQKELRSQLHDSKQEELEAKKRKRAQQLERDKFIIE 1622
Query 117 NKK 119
N+K
Sbjct 1623 NRK 1625
> cpv:cgd4_4040 Yer006wp-like. Yjeq GTpase ; K14538 nuclear GTP-binding
protein
Length=478
Score = 29.3 bits (64), Expect = 2.8, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 0/76 (0%)
Query 43 LLKKYRDAKKIVSHMYHKLYVRCKGNQFKNKRVLIEAIHNEKNLKVKEKALQEQVDARKQ 102
L +KY+ K++ H + K + K K+ + ++ KE+ L E DA+++
Sbjct 17 LGRKYKIEKRVSQHKKKMKKIARKSSFIKGKKGRTKELNIPNLWPFKEQMLNEMNDAKER 76
Query 103 KAAAQKEKRKLKEENK 118
++EK+KL +E K
Sbjct 77 IKQEREEKKKLIKEMK 92
> dre:100150861 GTPase, IMAP family member 4-like
Length=916
Score = 29.3 bits (64), Expect = 2.9, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 21/85 (24%)
Query 35 RRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQFKNKRVLIEAIHNEKNLKVKEKALQ 94
R++ L+RL K+ +++ + + + KLY E+N+K KE+ Q
Sbjct 484 RQEEELKRLKKEKQNSDEHIQRLKSKLY------------------ETEENIKKKERERQ 525
Query 95 EQVDARKQKAAAQKEKRKLKEENKK 119
+Q++ +++ KE+R L+E+ +K
Sbjct 526 KQIEDLEKRL---KEERNLREDQQK 547
> dre:100000683 si:ch211-131e11.19
Length=916
Score = 28.1 bits (61), Expect = 7.1, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 21/85 (24%)
Query 35 RRQRVLRRLLKKYRDAKKIVSHMYHKLYVRCKGNQFKNKRVLIEAIHNEKNLKVKEKALQ 94
R++ L+RL + +++ + + + KLY E+N+K KE+ Q
Sbjct 484 RQEEELKRLKIEKQNSDEQIQRLKSKLY------------------ETEENIKKKERERQ 525
Query 95 EQVDARKQKAAAQKEKRKLKEENKK 119
EQ++ +++ KE+R L+E+ +K
Sbjct 526 EQIEDLEKRL---KEERNLREDQQK 547
> sce:YLR383W SMC6, RHC18; Protein involved in structural maintenance
of chromosomes; essential subunit of Mms21-Smc5-Smc6
complex; required for growth, DNA repair, interchromosomal
and sister chromatid recombination; homologous to S. pombe rad18
Length=1114
Score = 28.1 bits (61), Expect = 7.5, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query 40 LRRLLKKYRDAKKIVSHMYHKLYVRCKGNQFKNKRVLIEAIHNE---KNLKVKEKALQEQ 96
L+ L +Y DAKK++ + + + + K + I+ HN KNL+ + +Q++
Sbjct 277 LKSLKAEYEDAKKLLRELNQTSDLNERKMLLQAKSLWIDVAHNTDACKNLENEISGIQQK 336
Query 97 VDARKQKAAAQKEK 110
VD +K ++EK
Sbjct 337 VDEVTEKIRNRQEK 350
Lambda K H
0.318 0.129 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2044474180
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40