bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_4441_orf1 Length=267 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_105240 XPA-binding protein, putative ; K12867 pre-m... 303 5e-82 dre:387600 xab2, MGC198247, zgc:63498, zgc:63949; XPA binding ... 250 5e-66 mmu:67439 Xab2, 0610041O14Rik, AV025587; XPA binding protein 2... 249 8e-66 hsa:56949 XAB2, DKFZp762C1015, HCNP, HCRN, NTC90, SYF1; XPA bi... 249 9e-66 xla:100036801 xab2; XPA binding protein 2; K12867 pre-mRNA-spl... 245 1e-64 ath:AT5G28740 transcription-coupled DNA repair protein-related... 231 2e-60 cel:C50F2.3 hypothetical protein; K12867 pre-mRNA-splicing fac... 231 3e-60 bbo:BBOV_IV000660 21.m02991; XBA-binding protein 2; K12867 pre... 190 5e-48 tpv:TP01_0087 adapter protein; K12867 pre-mRNA-splicing factor... 178 2e-44 pfa:PFL1735c RNA-processing protein, putative; K12867 pre-mRNA... 58.2 3e-08 cpv:cgd7_970 Syf1p. protein with 8 HAT domains ; K12867 pre-mR... 45.4 2e-04 hsa:9733 SART3, DSAP1, KIAA0156, MGC138188, P100, RP11-13G14, ... 34.3 0.52 tgo:TGME49_073160 hypothetical protein 33.5 0.77 tpv:TP01_0797 hypothetical protein; K12855 pre-mRNA-processing... 33.1 0.98 dre:368631 pms1, PMSL1, si:dz164h20.2, si:dz72b14.2; PMS1 post... 32.7 1.4 sce:YDR416W SYF1, NTC90; Member of the NineTeen Complex (NTC) ... 32.3 1.9 ath:AT3G04240 SEC; SEC (secret agent); transferase, transferri... 32.3 2.1 mmu:53890 Sart3, AU045857, mKIAA0156; squamous cell carcinoma ... 32.0 2.4 ath:AT3G03580 pentatricopeptide (PPR) repeat-containing protein 32.0 2.6 hsa:374920 C19orf68, MGC50339; chromosome 19 open reading fram... 30.8 5.5 ath:AT4G08210 pentatricopeptide (PPR) repeat-containing protein 30.4 6.9 tgo:TGME49_085970 hypothetical protein 30.4 7.9 mmu:108155 Ogt, 1110038P24Rik, 4831420N21Rik, AI115525, Ogtl; ... 30.0 9.5 > tgo:TGME49_105240 XPA-binding protein, putative ; K12867 pre-mRNA-splicing factor SYF1 Length=966 Score = 303 bits (775), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 150/289 (51%), Positives = 203/289 (70%), Gaps = 26/289 (8%) Query 3 RCLVHLSRMPEIWRMNLKFLQQQQLLTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCG 62 R LVHLSRMP+IW + + FL++Q+LLTR RR FD AL++LAVTQH+ +W + +VK G Sbjct 126 RALVHLSRMPKIWMLFVDFLKRQKLLTRTRRAFDRALQSLAVTQHDQVWDRYIQFVKEAG 185 Query 63 VPETAVCLYRRWIMIEPERTDEFALYLSS--IGRYDEAASHLAAVASDSTITTASGRTRH 120 V ET + +YRR +M+ PE+ ++F YL S +GRYD+AA LA V +D + T RT+H Sbjct 186 VVETTLRVYRRCLMLLPEKVEDFIAYLQSPEVGRYDDAARLLAEVVNDESSETQ--RTKH 243 Query 121 ELWLELCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARDI 180 ELWLELC LV HP I S+R E +LRSGI+RFSD V LWC+LASH+VR+G L K RD+ Sbjct 244 ELWLELCDLVCKHPREIKSLRAEAVLRSGISRFSDQVGKLWCALASHFVRLGQLEKTRDV 303 Query 181 YEEAVSSVSTIRDLAVVYEAYAAFEEAVVA---QLLQEQQQASPEAAAA----------- 226 +EEA+ V T+ DLA+VY+A+ FEE+++A + L++++ A P+ AA+ Sbjct 304 FEEALCGVGTLHDLALVYDAFVQFEESLLAAKMKELEDEENAGPDCAASEDAADRRERKR 363 Query 227 --------AAKDIDFAIARLERLTXRRPLLISSCKLRQNPHNVHEWLAR 267 ++++DF + RLE LT RRPLL+SSCKLRQNPHNVHEWLAR Sbjct 364 RRKEKKKQQSEEVDFLMTRLEFLTERRPLLVSSCKLRQNPHNVHEWLAR 412 Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 21/99 (21%) Query 119 RHELWLELCKLVAAHPESIHS--MRVEDILRSGIAR----FSDAVAS------------L 160 R L + CKL +P ++H RV D+ + A+ FS+AVA+ L Sbjct 389 RRPLLVSSCKL-RQNPHNVHEWLARV-DLFKGDTAKEVETFSEAVATVDPQQAVGRVSVL 446 Query 161 WCSLASHYVRMGLLAKARDIYEEAVSS-VSTIRDLAVVY 198 W + A +Y G L AR I+E+A + V T+ +LA ++ Sbjct 447 WIAFARYYEDRGDLPNARLIFEKATKARVRTVDELASIW 485 > dre:387600 xab2, MGC198247, zgc:63498, zgc:63949; XPA binding protein 2; K12867 pre-mRNA-splicing factor SYF1 Length=851 Score = 250 bits (638), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 115/265 (43%), Positives = 173/265 (65%), Gaps = 2/265 (0%) Query 3 RCLVHLSRMPEIWRMNLKFLQQQQLLTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCG 62 R LV + +MP IW +F+ Q +TR RRTFD ALRAL +TQH +WP + + ++ Sbjct 96 RALVFMHKMPRIWIDYCQFMVSQCKITRSRRTFDRALRALPITQHPRIWPLYLRFARNLP 155 Query 63 VPETAVCLYRRWIMIEPERTDEFALYLSSIGRYDEAASHLAAVASDSTITTASGRTRHEL 122 +PETA+ +YRR++ + PE +E+ YL S+GR DEAA LAAV +D + G++ ++L Sbjct 156 LPETAIRVYRRYLKLSPENAEEYIDYLRSVGRLDEAALRLAAVVNDENFVSKEGKSNYQL 215 Query 123 WLELCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARDIYE 182 W ELC L++ +P+ + S+ V I+R G+ RF+D + LWCS+A +Y+R G KARD+YE Sbjct 216 WHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSMADYYIRSGHFEKARDVYE 275 Query 183 EAVSSVSTIRDLAVVYEAYAAFEEAVVAQLLQEQQQASPEAAAAAAKDIDFAIARLERLT 242 EA+ +V T+RD V+++YA FEE+++A ++ + + ++ +AR E L Sbjct 276 EAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTSELGQDEDDDIDLEL--RLARFESLI 333 Query 243 XRRPLLISSCKLRQNPHNVHEWLAR 267 RRPLL++S LRQNPHNVHEW R Sbjct 334 TRRPLLLNSVLLRQNPHNVHEWHKR 358 Score = 33.9 bits (76), Expect = 0.72, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 2/87 (2%) Query 120 HELWLELCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARD 179 HE W + KL P I + E + + + SLW S A Y + AR Sbjct 353 HE-WHKRVKLYEGQPRQIINTYTEAVQTIDPMKATGKPHSLWVSFAKFYEDNEQIDDART 411 Query 180 IYEEAVS-SVSTIRDLAVVYEAYAAFE 205 I+E+A + + DLA V+ Y E Sbjct 412 IFEKATKVNYKQVDDLAAVWCEYGEME 438 > mmu:67439 Xab2, 0610041O14Rik, AV025587; XPA binding protein 2; K12867 pre-mRNA-splicing factor SYF1 Length=855 Score = 249 bits (636), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 115/265 (43%), Positives = 172/265 (64%), Gaps = 2/265 (0%) Query 3 RCLVHLSRMPEIWRMNLKFLQQQQLLTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCG 62 R V + +MP +W +FL Q +T RRTFD ALRAL +TQH +WP + +++S Sbjct 101 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHP 160 Query 63 VPETAVCLYRRWIMIEPERTDEFALYLSSIGRYDEAASHLAAVASDSTITTASGRTRHEL 122 +PETAV YRR++ + PE +E+ YL S R DEAA LA V +D + +G++ ++L Sbjct 161 LPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQL 220 Query 123 WLELCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARDIYE 182 W ELC L++ +P+ + S+ V+ I+R G+ RF+D + LWCSLA +Y+R G KARD+YE Sbjct 221 WHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYE 280 Query 183 EAVSSVSTIRDLAVVYEAYAAFEEAVVAQLLQEQQQASPEAAAAAAKDIDFAIARLERLT 242 EA+ +V T+RD V+++YA FEE+++A ++ + E D++ +AR E+L Sbjct 281 EAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDV--DLELRLARFEQLI 338 Query 243 XRRPLLISSCKLRQNPHNVHEWLAR 267 RRPLL++S LRQNPH+VHEW R Sbjct 339 SRRPLLLNSVLLRQNPHHVHEWHKR 363 > hsa:56949 XAB2, DKFZp762C1015, HCNP, HCRN, NTC90, SYF1; XPA binding protein 2; K12867 pre-mRNA-splicing factor SYF1 Length=855 Score = 249 bits (635), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 115/265 (43%), Positives = 172/265 (64%), Gaps = 2/265 (0%) Query 3 RCLVHLSRMPEIWRMNLKFLQQQQLLTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCG 62 R V + +MP +W +FL Q +T RRTFD ALRAL +TQH +WP + +++S Sbjct 101 RAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHP 160 Query 63 VPETAVCLYRRWIMIEPERTDEFALYLSSIGRYDEAASHLAAVASDSTITTASGRTRHEL 122 +PETAV YRR++ + PE +E+ YL S R DEAA LA V +D + +G++ ++L Sbjct 161 LPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQL 220 Query 123 WLELCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARDIYE 182 W ELC L++ +P+ + S+ V+ I+R G+ RF+D + LWCSLA +Y+R G KARD+YE Sbjct 221 WHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYE 280 Query 183 EAVSSVSTIRDLAVVYEAYAAFEEAVVAQLLQEQQQASPEAAAAAAKDIDFAIARLERLT 242 EA+ +V T+RD V+++YA FEE+++A ++ + E D++ +AR E+L Sbjct 281 EAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDV--DLELRLARFEQLI 338 Query 243 XRRPLLISSCKLRQNPHNVHEWLAR 267 RRPLL++S LRQNPH+VHEW R Sbjct 339 SRRPLLLNSVLLRQNPHHVHEWHKR 363 > xla:100036801 xab2; XPA binding protein 2; K12867 pre-mRNA-splicing factor SYF1 Length=838 Score = 245 bits (626), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 117/265 (44%), Positives = 171/265 (64%), Gaps = 2/265 (0%) Query 3 RCLVHLSRMPEIWRMNLKFLQQQQLLTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCG 62 R LV + +MP IW +FL Q +TR RRTFD ALRAL +TQH +WP + +V++ Sbjct 92 RALVFMHKMPRIWLDYCQFLMDQCKITRARRTFDRALRALPITQHHRIWPLYLRFVRAHP 151 Query 63 VPETAVCLYRRWIMIEPERTDEFALYLSSIGRYDEAASHLAAVASDSTITTASGRTRHEL 122 +PETAV +YRR++ + PE +E+ YL SI R DEAAS LAA+ + + G++ ++L Sbjct 152 LPETAVRVYRRYLKLSPENAEEYIEYLRSIDRLDEAASRLAAIVNQDGFVSKEGKSNYQL 211 Query 123 WLELCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARDIYE 182 W +LC L++ HP S+ S+ I+R G+ RF+D LWC+LA ++ R G KARD+YE Sbjct 212 WQQLCTLLSQHPGSVRSLDAAAIIRGGLTRFTDQRGKLWCALAEYHTRSGHFEKARDVYE 271 Query 183 EAVSSVSTIRDLAVVYEAYAAFEEAVVAQLLQEQQQASPEAAAAAAKDIDFAIARLERLT 242 EA+ +V+T+RD V+++YA FEE+V+A ++ E ++ +AR E+L Sbjct 272 EAIQTVTTVRDFTQVFDSYAQFEESVIAAKMETVSDLGKEDEDDLDLEL--RLARFEQLI 329 Query 243 XRRPLLISSCKLRQNPHNVHEWLAR 267 RRPLL+++ LRQNPHNVHEW R Sbjct 330 ERRPLLLNAVLLRQNPHNVHEWHKR 354 > ath:AT5G28740 transcription-coupled DNA repair protein-related; K12867 pre-mRNA-splicing factor SYF1 Length=917 Score = 231 bits (589), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 120/299 (40%), Positives = 170/299 (56%), Gaps = 34/299 (11%) Query 3 RCLVHLSRMPEIWRMNLKFLQQQQLLTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCG 62 R LV + +MP IW M L+ L QQL+TR RRTFD AL AL VTQH+ +W + +V G Sbjct 93 RGLVTMHKMPRIWVMYLQTLTVQQLITRTRRTFDRALCALPVTQHDRIWEPYLVFVSQNG 152 Query 63 VP-ETAVCLYRRWIMIEPERTDEFALYLSSIGRYDEAASHLAAVASDSTITTASGRTRHE 121 +P ET++ +YRR++M +P +EF +L R+ E+A LA+V +D + G+T+H+ Sbjct 153 IPIETSLRVYRRYLMYDPSHIEEFIEFLVKSERWQESAERLASVLNDDKFYSIKGKTKHK 212 Query 122 LWLELCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARDIY 181 LWLELC+L+ H I + V+ I+R GI +F+D V LW SLA +Y+R LL KARDIY Sbjct 213 LWLELCELLVHHANVISGLNVDAIIRGGIRKFTDEVGMLWTSLADYYIRKNLLEKARDIY 272 Query 182 EEAVSSVSTIRDLAVVYEAYAAFEEAVVAQLLQEQQQASPEAAAAAA------------- 228 EE + V T+RD +V+++ Y+ FEE+ VA+ ++ + E Sbjct 273 EEGMMKVVTVRDFSVIFDVYSRFEESTVAKKMEMMSSSDEEDENEENGVEDDEEDVRLNF 332 Query 229 --------------------KDIDFAIARLERLTXRRPLLISSCKLRQNPHNVHEWLAR 267 D+D +ARLE L RRP L +S LRQNPHNV +W R Sbjct 333 NLSVKELQRKILNGFWLNDDNDVDLRLARLEELMNRRPALANSVLLRQNPHNVEQWHRR 391 > cel:C50F2.3 hypothetical protein; K12867 pre-mRNA-splicing factor SYF1 Length=855 Score = 231 bits (588), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 112/266 (42%), Positives = 167/266 (62%), Gaps = 5/266 (1%) Query 3 RCLVHLSRMPEIWRMNLKFLQQQQLLTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCG 62 RCL+ L +MP IW + + ++ L+T RR FD ALR+L VTQH +W + ++ S Sbjct 108 RCLMRLHKMPRIWICYCEVMIKRGLITETRRVFDRALRSLPVTQHMRIWTLYIGFLTSHD 167 Query 63 VPETAVCLYRRWIMIEPERTDEFALYLSSIGRYDEAASHLAAVASDSTITTASGRTRHEL 122 +PET + +YRR++ + P+ +++ YL + DEAA L + + + GRT H+L Sbjct 168 LPETTIRVYRRYLKMNPKAREDYVEYLIERDQIDEAAKELTTLVNQDQNVSEKGRTAHQL 227 Query 123 WLELCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARDIYE 182 W +LC L++ +P I S+ V+ I+R GI R++D V LWCSLA +Y+R +ARD+YE Sbjct 228 WTQLCDLISKNPVKIFSLNVDAIIRQGIYRYTDQVGFLWCSLADYYIRSAEFERARDVYE 287 Query 183 EAVSSVSTIRDLAVVYEAYAAFEEAVVAQLLQE-QQQASPEAAAAAAKDIDFAIARLERL 241 EA++ VST+RD A VY+AYAAFEE V+ ++QE +Q PE D+++ R + L Sbjct 288 EAIAKVSTVRDFAQVYDAYAAFEEREVSIMMQEVEQSGDPEEEV----DLEWMFQRYQHL 343 Query 242 TXRRPLLISSCKLRQNPHNVHEWLAR 267 R+ L++S LRQNPHNV EWL R Sbjct 344 MERKNELMNSVLLRQNPHNVGEWLNR 369 > bbo:BBOV_IV000660 21.m02991; XBA-binding protein 2; K12867 pre-mRNA-splicing factor SYF1 Length=796 Score = 190 bits (482), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 91/263 (34%), Positives = 153/263 (58%), Gaps = 9/263 (3%) Query 3 RCLVHLSRMPEIWRMNLKFLQQQQLLTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCG 62 RC++H+ P I+ + +FL+ Q +++R RRT+D AL L +TQH ++W + +++VK Sbjct 151 RCIIHVYAAPAIYILYGQFLRTQNMISRTRRTYDRALLNLPITQHMMIWQQYIEFVKEVD 210 Query 63 VPETAVCLYRRWIMIEPERTDEFALYLSSIGRYDEAASHLAAVASDSTITTASGRTRHEL 122 + + +R+I ++P + L YDEA L + +D + SG+T+++L Sbjct 211 LLPMGKAVLKRYIQLQPNTRESLYKMLKQHEHYDEACIVLCELLNDGKFVSESGKTQYDL 270 Query 123 WLELCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARDIYE 182 W+ELC+L+ + + I S+ +E I++ GIA++SD VA LW LA Y+ G + ARD+YE Sbjct 271 WVELCELIRDYSQYIRSVPIEAIIKEGIAKYSDQVAQLWIILADIYILRGQMLNARDVYE 330 Query 183 EAVSSVSTIRDLAVVYEAYAAFEEAVVAQLLQEQQQASPEAAAAAAKDIDFAIARLERLT 242 EA+ SV+T++D + +++ YA F E Q + A D+ + RLE L Sbjct 331 EALKSVTTVQDFSTIFDVYAKFLEKYAKQ---------RKKLRGADLDVVMTVDRLENLI 381 Query 243 XRRPLLISSCKLRQNPHNVHEWL 265 R +L++ KL+QN HNV+ WL Sbjct 382 NTRAMLMAKVKLKQNAHNVYNWL 404 Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 0/66 (0%) Query 121 ELWLELCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARDI 180 ELW H + + R+ + G +F D +AS+WC+ ++R L +A ++ Sbjct 439 ELWTSYASYFENHVDVDAADRIFEKAVEGNYKFVDDLASVWCAWVEMHIRHNNLKRALEL 498 Query 181 YEEAVS 186 +AV Sbjct 499 SRQAVD 504 > tpv:TP01_0087 adapter protein; K12867 pre-mRNA-splicing factor SYF1 Length=839 Score = 178 bits (451), Expect = 2e-44, Method: Composition-based stats. Identities = 92/274 (33%), Positives = 153/274 (55%), Gaps = 20/274 (7%) Query 4 CLVHLSRMPEIWRMNLKFLQQQQLLTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCGV 63 CL+H P + + FL+ Q +T+VRR +D AL +A+TQH L+W E + +V + Sbjct 172 CLIHNFAYPTFYLLYGAFLRFQHRITKVRRLYDKALLNIAITQHHLIWDEYLRFVNEVDL 231 Query 64 PETAVCLYRRWIMIEPERTDEFALYLSSIGRYDEAASHLAAVASDSTITTASGRTRHELW 123 +YRR+I ++P + +L G YD+AA L + +D T + SG++ ++LW Sbjct 232 LPLGKAVYRRYIQLKPSYREVLYEFLKRHGSYDDAAQVLYKLLNDHTFASESGKSSYDLW 291 Query 124 LELCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARDIYEE 183 +ELC+L+ H ++I S+ VE +++ GI +++D VA+LW LA Y+ G L ARD YEE Sbjct 292 IELCELIRDHSDAITSIPVETLIKEGIGKYTDQVATLWIILADIYIVRGQLNIARDTYEE 351 Query 184 AVSSVSTIRDLAVVYEAYAAFEEAVVAQLLQEQQQASPEAAAAAAKDIDF---------- 233 A+ V+T++D +++++ YA F L+ + S + ++ Sbjct 352 ALDRVTTVQDFSIIFDVYAKF--------LENYAKQSNKLGYVLINNLHLHYIRTDHLET 403 Query 234 --AIARLERLTXRRPLLISSCKLRQNPHNVHEWL 265 + RLE L R LL++S KL+QN HNV+ W+ Sbjct 404 LMTVERLESLVNNRALLLASVKLKQNIHNVYNWI 437 > pfa:PFL1735c RNA-processing protein, putative; K12867 pre-mRNA-splicing factor SYF1 Length=1031 Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 104/222 (46%), Gaps = 12/222 (5%) Query 3 RCLVHLSRMPEIWRMNLKFLQQQQLLTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCG 62 +CL+++ I+ M ++FL Q+ + ++R+ F+ +L+ + + Q LW + + + Sbjct 240 QCLLYMYNFKSIYIMYIQFLYIQRDVKKIRQIFNLSLQNVYLNQQNDLWECQLLFNEKIN 299 Query 63 VPETAVCLYRRWIMIEPERTDEFALYLSSIGRYDEAASHLAAVASDSTITTASGRTRHEL 122 +R++ I PE+ + Y A + + +++++ Sbjct 300 NKVINYEYIKRYVTIYPEQIIHLFKHYVKYKMYKNAMITFFYILNSEDNFDLGNFSKYDI 359 Query 123 WLELCKLV----AAHPESIHSMRVEDILRSGIARFS--DAVASLWCSLASHYVRMGLLAK 176 + E+ KL+ + + + IH +LR+ + F +++ S++ LA++++ G K Sbjct 360 YQEIYKLLNSKGSLNNDIIH------LLRNNLYIFKNYESITSIYILLANNFIYDGRWNK 413 Query 177 ARDIYEEAVSSVSTIRDLAVVYEAYAAFEEAVVAQLLQEQQQ 218 A D YEE +S T+ D +++ Y + ++ + EQ++ Sbjct 414 AMDSYEEGISECYTVNDFITLFDNYIEMLKMLIDLNIYEQEE 455 > cpv:cgd7_970 Syf1p. protein with 8 HAT domains ; K12867 pre-mRNA-splicing factor SYF1 Length=1020 Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 6/94 (6%) Query 13 EIWRMNLKFLQQQQL-LTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCGVPETAVCLY 71 ++W +L++ +L T R D +L++L + QH +W ++Y +PE ++ + Sbjct 171 DLWLRYNAYLRKSRLEFTNSRLVLDRSLKSLPIEQHHKIWERYLEYSMEMNIPELSISIS 230 Query 72 RRWIMIEPERTDEFALYLSSI---GRYDEAASHL 102 RR+I+ + +Y+ ++ GRY+E L Sbjct 231 RRFILF--SYVEGIRMYIQALIDGGRYEECLDKL 262 > hsa:9733 SART3, DSAP1, KIAA0156, MGC138188, P100, RP11-13G14, TIP110, p110, p110(nrb); squamous cell carcinoma antigen recognized by T cells 3 Length=963 Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%) Query 120 HELWLE-LCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYV----RMGLL 174 ELWLE L ++ + + V D+ + + ++W + V + G L Sbjct 146 EELWLEWLHDEISMAQDGLDREHVYDLFEKAVKDY--ICPNIWLEYGQYSVGGIGQKGGL 203 Query 175 AKARDIYEEAVSSVS--TIRDLAVVYEAYAAFEEAVV 209 K R ++E A+SSV + LA ++EAY FE A+V Sbjct 204 EKVRSVFERALSSVGLHMTKGLA-LWEAYREFESAIV 239 > tgo:TGME49_073160 hypothetical protein Length=243 Score = 33.5 bits (75), Expect = 0.77, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 0/54 (0%) Query 45 TQHELLWPEMMDYVKSCGVPETAVCLYRRWIMIEPERTDEFALYLSSIGRYDEA 98 ++ +LL+ E D G PE C+ + +PE E A +L GR +EA Sbjct 105 SERQLLFAEAADGDARAGKPEEESCMDASGLAGDPEPAGERACFLEPQGRLEEA 158 > tpv:TP01_0797 hypothetical protein; K12855 pre-mRNA-processing factor 6 Length=1032 Score = 33.1 bits (74), Expect = 0.98, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 8/72 (11%) Query 117 RTRHELWLELCKLVAAH--PESIHSMRVEDILRSGIARFSDAVASLWCSLASHYVRMGLL 174 +TR LWL L +L + H P+ +VED LRS ++ ++ LW A H G + Sbjct 576 KTRSSLWLALVELESKHGTPD-----KVEDHLRSAVSYCPNS-EILWLMYAKHKWVEGDV 629 Query 175 AKARDIYEEAVS 186 +RDI A++ Sbjct 630 ESSRDILSRALT 641 > dre:368631 pms1, PMSL1, si:dz164h20.2, si:dz72b14.2; PMS1 postmeiotic segregation increased 1 (S. cerevisiae); K10864 DNA mismatch repair protein PMS1 Length=896 Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 0/31 (0%) Query 200 AYAAFEEAVVAQLLQEQQQASPEAAAAAAKD 230 A++ FE+ +Q+LQE +ASP+ AAAK+ Sbjct 532 AFSLFEQDTRSQVLQENPKASPQDVTAAAKE 562 > sce:YDR416W SYF1, NTC90; Member of the NineTeen Complex (NTC) that contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; null mutant has splicing defect and arrests in G2/M; homologs in human and C. elegans; K12867 pre-mRNA-splicing factor SYF1 Length=859 Score = 32.3 bits (72), Expect = 1.9, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 2/127 (1%) Query 143 EDILRSGIARFSDAVASLWCSLASHYVRMGLLAKARDIYEEAVSSVSTIRDLAVVYEAYA 202 E+ +R + D L SLA +Y+ G L D+ ++++ D +Y Y Sbjct 288 EEFMRQMNGIYPDKWLFLILSLAKYYISRGRLDSCGDLLKKSLQQTLRYSDFDRIYNFYL 347 Query 203 AFEEAVVAQLLQEQQQASPE--AAAAAAKDIDFAIARLERLTXRRPLLISSCKLRQNPHN 260 FE+ +L + ++ + + + +A E L + ++ LRQ+ + Sbjct 348 LFEQECSQFILGKLKENDSKFFNQKDWTEKLQAHMATFESLINLYDIYLNDVALRQDSNL 407 Query 261 VHEWLAR 267 V W+ R Sbjct 408 VETWMKR 414 > ath:AT3G04240 SEC; SEC (secret agent); transferase, transferring glycosyl groups; K09667 polypeptide N-acetylglucosaminyltransferase [EC:2.4.1.-] Length=977 Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 21/142 (14%) Query 129 LVAAHPESIHSMRVEDILRSGIARFSDAV------ASLWCSLASHYVRMGLLAKARDIYE 182 LV AH + M+ + ++ + + +AV A W +LA ++ G L +A Y+ Sbjct 188 LVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYK 247 Query 183 EAVSSVSTIRD----LAVVYEAYAAFEEAVVAQLLQEQQQASPEAAAAAAK--------- 229 EAV D L VY+A EA++ Q Q P +A A Sbjct 248 EAVKLKPAFPDAYLNLGNVYKALGRPTEAIMC--YQHALQMRPNSAMAFGNIASIYYEQG 305 Query 230 DIDFAIARLERLTXRRPLLISS 251 +D AI ++ R P + + Sbjct 306 QLDLAIRHYKQALSRDPRFLEA 327 Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 15/71 (21%) Query 152 RFSDAVASLWCSLASHYVRMGLLAKARDIYEEAVS-------SVSTIRDL----AVVYEA 200 F+DA W +LAS Y+R G L++A ++A+S + S + +L +++EA Sbjct 153 NFADA----WSNLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEA 208 Query 201 YAAFEEAVVAQ 211 Y+ + EAV Q Sbjct 209 YSCYLEAVRIQ 219 > mmu:53890 Sart3, AU045857, mKIAA0156; squamous cell carcinoma antigen recognized by T-cells 3 Length=962 Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 10/97 (10%) Query 120 HELWLE-LCKLVAAHPESIHSMRVEDILRSGIARFSDAVASLWCSLASHYV----RMGLL 174 ELWLE L ++ + + V ++ + + ++W + V + G L Sbjct 147 EELWLEWLHDEISMAMDGLDREHVYELFERAVKDY--ICPNIWLEYGQYSVGGIGQKGGL 204 Query 175 AKARDIYEEAVSSVS--TIRDLAVVYEAYAAFEEAVV 209 K R ++E A+SSV + LA ++EAY FE A+V Sbjct 205 EKVRSVFERALSSVGLHMTKGLA-IWEAYREFESAIV 240 > ath:AT3G03580 pentatricopeptide (PPR) repeat-containing protein Length=882 Score = 32.0 bits (71), Expect = 2.6, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Query 163 SLASHYVRMGLLAKARDIYEE-AVSSVSTIRDLAVVYEAYAAFEEAV 208 +L Y RMGLL +AR +++E V + + L Y ++ +EEA+ Sbjct 146 ALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192 > hsa:374920 C19orf68, MGC50339; chromosome 19 open reading frame 68 Length=578 Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 0/82 (0%) Query 99 ASHLAAVASDSTITTASGRTRHELWLELCKLVAAHPESIHSMRVEDILRSGIARFSDAVA 158 A L + S + +GR LW LC+L A + + + ++ G A F D Sbjct 269 AQGLETLFSKAQELGGAGREDPGLWSRLCRLAGASSPAAYDEALAELHAHGPAAFVDYFE 328 Query 159 SLWCSLASHYVRMGLLAKARDI 180 W +VR ARD+ Sbjct 329 RNWEPRRDMWVRFRAFEAARDL 350 > ath:AT4G08210 pentatricopeptide (PPR) repeat-containing protein Length=686 Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Query 26 QLLTRVRRTFDAALRALAVTQHELLWPEMMDYVKSCGVPETAVCLYRRWIMIEPERTDEF 85 +LL+ + FD VT W M+ S G P A+ LYRR + E E +EF Sbjct 54 RLLSDAHKVFDEMSERNIVT-----WTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEF 108 > tgo:TGME49_085970 hypothetical protein Length=912 Score = 30.4 bits (67), Expect = 7.9, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 11/56 (19%) Query 223 AAAAAAKDIDFAIARLERLTXRRPL-----------LISSCKLRQNPHNVHEWLAR 267 AA + A+D++F RL P L S KLR++PH H+W R Sbjct 280 AANSVAEDLEFLCRRLSVPNLPHPTHPFRLKLLLDALFESFKLRKDPHYAHDWAQR 335 > mmu:108155 Ogt, 1110038P24Rik, 4831420N21Rik, AI115525, Ogtl; O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase); K09667 polypeptide N-acetylglucosaminyltransferase [EC:2.4.1.-] Length=1046 Score = 30.0 bits (66), Expect = 9.5, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 10/78 (12%) Query 153 FSDAVASLWCSLASHYVRMGLLAKARDIYEEAV----SSVSTIRDLAVVYEAYAAFEEAV 208 F DA +C+LA+ G +A+A D Y A+ + ++ +LA + EEAV Sbjct 292 FPDA----YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAV 347 Query 209 VAQLLQEQQQASPEAAAA 226 +L ++ + PE AAA Sbjct 348 --RLYRKALEVFPEFAAA 363 Lambda K H 0.323 0.131 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 9954723792 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40