bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_4472_orf2 Length=57 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_033190 hypothetical protein ; K06063 SNW domain-con... 65.5 4e-11 mmu:66354 Snw1, 2310008B08Rik, AW048543, MGC55033, NCoA-62, SK... 60.5 1e-09 xla:734970 snw1, MGC132028, bx42, ncoa-62, prp45, prpf45, skii... 60.5 1e-09 hsa:22938 SNW1, Bx42, MGC119379, NCOA-62, PRPF45, Prp45, SKIIP... 57.8 8e-09 cel:T27F2.1 skp-1; mammalian SKIP (Ski interacting protein) ho... 53.9 1e-07 dre:100334141 SKI-interacting protein-like 52.4 4e-07 dre:100329938 SKI-interacting protein-like 52.0 4e-07 dre:321852 snw1, MGC123090, fb37b08, skiip, wu:fb37b08, zgc:12... 52.0 5e-07 ath:AT1G77180 chromatin protein family; K06063 SNW domain-cont... 50.1 2e-06 pfa:PFB0875c chromatin-binding protein, putative; K06063 SNW d... 41.6 6e-04 > tgo:TGME49_033190 hypothetical protein ; K06063 SNW domain-containing protein 1 Length=557 Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 27/34 (79%), Positives = 30/34 (88%), Gaps = 0/34 (0%) Query 24 PPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPLG 57 PPY R+GF+PR EEDFGGGGA+PEI VAQFPLG Sbjct 83 PPYGQRKGFVPRSEEDFGGGGAFPEILVAQFPLG 116 > mmu:66354 Snw1, 2310008B08Rik, AW048543, MGC55033, NCoA-62, SKIP, Skiip; SNW domain containing 1; K06063 SNW domain-containing protein 1 Length=536 Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 0/50 (0%) Query 8 AQSRLQKSQKAPAREIPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPLG 57 +Q LQ S + RE PPY +R+G+IPR EDFG GGA+PEI VAQ+PL Sbjct 26 SQRSLQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLD 75 > xla:734970 snw1, MGC132028, bx42, ncoa-62, prp45, prpf45, skiip; SNW domain containing 1; K06063 SNW domain-containing protein 1 Length=535 Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 0/50 (0%) Query 8 AQSRLQKSQKAPAREIPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPLG 57 AQ Q + + RE PPY HR+G++PR EDFG GGA+PEI VAQ+PL Sbjct 26 AQKSRQTALVSSRREPPPYGHRKGWVPRSLEDFGDGGAFPEIHVAQYPLD 75 > hsa:22938 SNW1, Bx42, MGC119379, NCOA-62, PRPF45, Prp45, SKIIP, SKIP; SNW domain containing 1; K06063 SNW domain-containing protein 1 Length=536 Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 0/50 (0%) Query 8 AQSRLQKSQKAPAREIPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPLG 57 +Q Q S + RE PPY +R+G+IPR EDFG GGA+PEI VAQ+PL Sbjct 26 SQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLD 75 > cel:T27F2.1 skp-1; mammalian SKIP (Ski interacting protein) homolog family member (skp-1); K06063 SNW domain-containing protein 1 Length=535 Score = 53.9 bits (128), Expect = 1e-07, Method: Composition-based stats. Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 0/38 (0%) Query 20 AREIPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPLG 57 ++E PPY R F PR EDFG GGA+PEI VAQFPLG Sbjct 41 SKEPPPYGKRTSFRPRGPEDFGDGGAFPEIHVAQFPLG 78 > dre:100334141 SKI-interacting protein-like Length=344 Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 0/36 (0%) Query 21 REIPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPL 56 R+ PPY R+ ++PR EDFG GGA+PEI VAQ+PL Sbjct 39 RDPPPYGFRKSWVPRALEDFGDGGAFPEIHVAQYPL 74 > dre:100329938 SKI-interacting protein-like Length=464 Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 0/36 (0%) Query 21 REIPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPL 56 R+ PPY R+ ++PR EDFG GGA+PEI VAQ+PL Sbjct 39 RDPPPYGFRKSWVPRALEDFGDGGAFPEIHVAQYPL 74 > dre:321852 snw1, MGC123090, fb37b08, skiip, wu:fb37b08, zgc:123090; SNW domain containing 1; K06063 SNW domain-containing protein 1 Length=536 Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 0/36 (0%) Query 21 REIPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPL 56 R+ PPY R+ ++PR EDFG GGA+PEI VAQ+PL Sbjct 39 RDPPPYGFRKSWVPRALEDFGDGGAFPEIHVAQYPL 74 > ath:AT1G77180 chromatin protein family; K06063 SNW domain-containing protein 1 Length=613 Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats. Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 0/48 (0%) Query 9 QSRLQKSQKAPAREIPPYLHRQGFIPRCEEDFGGGGAYPEIFVAQFPL 56 +S KS + +P YL+RQG P+ EDFG GGA+PEI + Q+PL Sbjct 32 ESETVKSSSIKFKVVPAYLNRQGLRPKNPEDFGDGGAFPEIHLPQYPL 79 > pfa:PFB0875c chromatin-binding protein, putative; K06063 SNW domain-containing protein 1 Length=482 Score = 41.6 bits (96), Expect = 6e-04, Method: Composition-based stats. Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 0/30 (0%) Query 26 YLHRQGFIPRCEEDFGGGGAYPEIFVAQFP 55 YL R+ C EDF GGGAYPEI + Q+P Sbjct 47 YLKRRHLRITCNEDFQGGGAYPEIHMNQYP 76 Lambda K H 0.321 0.141 0.444 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2082685716 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40