bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_4473_orf1 Length=162 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_019790 U4/U6 small nuclear ribonucleoprotein, putat... 120 2e-27 dre:403072 prpf3, HPRP3, HPRP3P; PRP3 pre-mRNA processing fact... 100 2e-21 xla:443589 prpf3, MGC130724; PRP3 pre-mRNA processing factor 3... 97.1 2e-20 hsa:9129 PRPF3, HPRP3, HPRP3P, PRP3, Prp3p, RP18; PRP3 pre-mRN... 95.1 8e-20 mmu:70767 Prpf3, 3632413F13Rik; PRP3 pre-mRNA processing facto... 94.0 2e-19 cel:M03C11.7 hypothetical protein; K12843 U4/U6 small nuclear ... 89.7 4e-18 tpv:TP04_0348 hypothetical protein; K12843 U4/U6 small nuclear... 85.5 8e-17 cpv:cgd5_1740 conserved protein, possible U4/U6 associated RNA... 84.0 2e-16 pfa:MAL13P1.45 U4/U6 small nuclear ribonucleoprotein, putative... 76.6 3e-14 bbo:BBOV_II002150 18.m06172; hypothetical protein; K12843 U4/U... 74.7 1e-13 ath:AT1G28060 small nuclear ribonucleoprotein family protein /... 69.7 4e-12 ath:AT3G55930 RNA splicing factor-related 54.3 2e-07 sce:YDR473C PRP3, RNA3; Prp3p; K12843 U4/U6 small nuclear ribo... 47.8 2e-05 ath:AT3G56790 RNA splicing factor-related 35.8 0.062 ath:AT4G34420 hypothetical protein 31.6 1.1 xla:398925 stk4, MGC68762, krs2, mst1, ysk3; serine/threonine ... 31.2 1.4 ath:AT2G01130 ATP binding / ATP-dependent helicase/ RNA bindin... 29.6 4.1 > tgo:TGME49_019790 U4/U6 small nuclear ribonucleoprotein, putative ; K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=694 Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/126 (64%), Positives = 95/126 (75%), Gaps = 4/126 (3%) Query 39 ARIWLSDCPAVEPWDLPLLKQTKTKAYEI--DETKIDALIEHPPPIATV--AKGEAIVNM 94 A+IW + P+VEPWD +LK ++ EI E +D L+EHP P+ V A I+NM Sbjct 386 AKIWAAQPPSVEPWDACILKVDASRPDEILPQEDALDNLVEHPVPVRPVLDASTNVIINM 445 Query 95 YLTPAERKKLRRRKRQEREREKPDKIRMGLLPPPPPKCKLSNLMRVLGDVAVADPSKTEK 154 YLT ERKKLRRRKRQE+EREK DKIRMGL+PPPPPK KL+NLMRVLGD AVADPSK EK Sbjct 446 YLTKQERKKLRRRKRQEKEREKQDKIRMGLMPPPPPKVKLTNLMRVLGDQAVADPSKVEK 505 Query 155 KVREQM 160 +VREQM Sbjct 506 EVREQM 511 > dre:403072 prpf3, HPRP3, HPRP3P; PRP3 pre-mRNA processing factor 3 homolog (yeast); K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=700 Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 94/167 (56%), Gaps = 16/167 (9%) Query 4 QLQQQQQQAAEAAAGTDTKTEVSPQEKLETAAPDLARIWLSDCPAVEPWDLPLL-----K 58 QL++ Q + A+AA KT + KL AP + + P +E WD +L Sbjct 366 QLEKLQMEIAQAA----KKTGIQASTKLALIAPK-KELGEGEIPNIEWWDSYILPFHINL 420 Query 59 QTKTKAYEIDETKIDALIEHP----PPIATVAKGEAIVNMYLTPAERKKLRRRKRQERER 114 T E++ + L+EHP PP+ T + +YLT E+KKLRR+ R+E ++ Sbjct 421 SAHTNLDEVEMHGVTNLVEHPTQMAPPVDT--DKPVTLGVYLTKKEQKKLRRQTRREGQK 478 Query 115 EKPDKIRMGLLPPPPPKCKLSNLMRVLGDVAVADPSKTEKKVREQMA 161 E +K+R+GL+PPP PK ++SNLMRVLG AV DP+K E VR QMA Sbjct 479 EVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMA 525 > xla:443589 prpf3, MGC130724; PRP3 pre-mRNA processing factor 3 homolog; K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=679 Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 94/169 (55%), Gaps = 16/169 (9%) Query 2 QQQLQQQQQQAAEAAAGTDTKTEVSPQEKLETAAPDLARIWLSDCPAVEPWDLPLLKQTK 61 + QL++ Q + A+AA KT + +L AP + + P +E WD ++ Sbjct 342 KSQLEKLQSEIAQAAK----KTGIQTSTRLAMIAPK-KELREGEIPEIEWWDSFIIPNGT 396 Query 62 TKAYEI-----DETKIDALIEHP----PPIATVAKGEAIVNMYLTPAERKKLRRRKRQER 112 E+ D I L+EHP PP+ A + +YLT E+KKLRR+ R+E Sbjct 397 ELTEEVLLKREDFHGITNLVEHPAQLSPPVDKDAP--VTLGIYLTKKEQKKLRRQTRREG 454 Query 113 EREKPDKIRMGLLPPPPPKCKLSNLMRVLGDVAVADPSKTEKKVREQMA 161 ++E +K+R+GL+PPP PK ++SNLMRVLG A+ DP+K E VR QMA Sbjct 455 QKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAIQDPTKVEAHVRAQMA 503 > hsa:9129 PRPF3, HPRP3, HPRP3P, PRP3, Prp3p, RP18; PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae); K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=683 Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 15/166 (9%) Query 4 QLQQQQQQAAEAAAGTDTKTEVSPQEKLETAAPDLARIWLSDCPAVEPWDLPLLKQ---- 59 QL++ Q + ++AA KT + +L AP + D P +E WD ++ Sbjct 347 QLEKLQAEISQAA----RKTGIHTSTRLALIAPK-KELKEGDIPEIEWWDSYIIPNGFDL 401 Query 60 TKTKAYEIDETKIDALIEHP----PPIATVAKGEAIVNMYLTPAERKKLRRRKRQERERE 115 T+ D I L+EHP PP+ + +YLT E+KKLRR+ R+E ++E Sbjct 402 TEENPKREDYFGITNLVEHPAQLNPPVDN--DTPVTLGVYLTKKEQKKLRRQTRREAQKE 459 Query 116 KPDKIRMGLLPPPPPKCKLSNLMRVLGDVAVADPSKTEKKVREQMA 161 +K+R+GL+PPP PK ++SNLMRVLG AV DP+K E VR QMA Sbjct 460 LQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMA 505 > mmu:70767 Prpf3, 3632413F13Rik; PRP3 pre-mRNA processing factor 3 homolog (yeast); K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=683 Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 15/166 (9%) Query 4 QLQQQQQQAAEAAAGTDTKTEVSPQEKLETAAPDLARIWLSDCPAVEPWDLPLLKQ---- 59 QL++ Q + ++AA KT + +L AP + D P +E WD ++ Sbjct 347 QLEKLQAEISQAA----RKTGIHTSTRLALIAPK-KELKEGDIPEIEWWDSYIIPNGFDL 401 Query 60 TKTKAYEIDETKIDALIEHP----PPIATVAKGEAIVNMYLTPAERKKLRRRKRQERERE 115 T+ D I L+EHP PP+ + +YLT E+KKLRR+ R+E ++E Sbjct 402 TEENPKREDYFGITNLVEHPAQLNPPVDN--DTPVTLGVYLTKKEQKKLRRQTRREAQKE 459 Query 116 KPDKIRMGLLPPPPPKCKLSNLMRVLGDVAVADPSKTEKKVREQMA 161 +K+R+GL PPP PK ++SNLMRVLG AV DP+K E VR QMA Sbjct 460 LQEKVRLGLTPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMA 505 > cel:M03C11.7 hypothetical protein; K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=621 Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 12/166 (7%) Query 4 QLQQQQQQAAEAAAGTDTKTEVSPQEKLETAAPDLARIWLSDCPAVEPWDLPLLKQTKT- 62 +L++ Q + + AA T + V KL P + P +E WD+ +L + Sbjct 280 KLERLQNEVSSAAQSTGISSAV----KLAMVTPTGTAKMENGVPDIEWWDMLVLDKVNYD 335 Query 63 -----KAYEIDETKIDALIEHPPPIA--TVAKGEAIVNMYLTPAERKKLRRRKRQERERE 115 E + L+EHP + T + + +YLT E+KK+RR+ R+E +E Sbjct 336 EIPAENDMERYSQTVSELVEHPISMRAPTEPLTQQYLKVYLTTKEKKKIRRQNRKEVLKE 395 Query 116 KPDKIRMGLLPPPPPKCKLSNLMRVLGDVAVADPSKTEKKVREQMA 161 K +KIR+GL P PK K+SNLMRVLG+ A+ DP+K E +VR+QMA Sbjct 396 KTEKIRLGLEKAPEPKVKISNLMRVLGNEAIQDPTKMEAQVRKQMA 441 > tpv:TP04_0348 hypothetical protein; K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=604 Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 54/140 (38%), Positives = 75/140 (53%), Gaps = 21/140 (15%) Query 42 WLSDCPAVEPWDLPL-----------LKQTKTKAY---------EIDETKIDALIEHPPP 81 W D P VE WD + L+ K Y +I+E + + IEHP Sbjct 295 WDDDEPFVEWWDRGVIILKSGEDPFKLQNLKKHQYITNVNLNELKINEDRFNNYIEHPVK 354 Query 82 I-ATVAKGEAIVNMYLTPAERKKLRRRKRQEREREKPDKIRMGLLPPPPPKCKLSNLMRV 140 + KG IV LT ER+K R +R++R++E DKI +G +PPPPPK ++SNL+ V Sbjct 355 LDGKRKKGLNIVPTQLTKKERRKARTLRRKQRQKEIRDKIAIGSIPPPPPKLRMSNLVNV 414 Query 141 LGDVAVADPSKTEKKVREQM 160 L + ADPSK EK V++QM Sbjct 415 LKNQTAADPSKVEKMVKKQM 434 > cpv:cgd5_1740 conserved protein, possible U4/U6 associated RNA splicing factor ; K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=452 Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 7/120 (5%) Query 47 PAVEPWDLPLLKQTKTKA-----YEIDETKIDALIEHPPPIATVAKGEAIVN--MYLTPA 99 P +E WD+P +K + + +EI +KI LIEHP P+ + V+ ++LT Sbjct 175 PELEHWDMPFVKPKENVSEDEFPFEILVSKISNLIEHPVPLEPYFDPDENVSSVIFLTKK 234 Query 100 ERKKLRRRKRQEREREKPDKIRMGLLPPPPPKCKLSNLMRVLGDVAVADPSKTEKKVREQ 159 E+ +LRR RQE+E E+ D+IRMG+ P P KLSNL +L + VA+PS E ++++Q Sbjct 235 EKARLRRMNRQEKEMERQDRIRMGIESPLRPILKLSNLHNILNEKVVAEPSNIELEIKKQ 294 > pfa:MAL13P1.45 U4/U6 small nuclear ribonucleoprotein, putative; K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=728 Score = 76.6 bits (187), Expect = 3e-14, Method: Composition-based stats. Identities = 60/101 (59%), Positives = 76/101 (75%), Gaps = 3/101 (2%) Query 63 KAYEIDETKIDALIEHPPPI---ATVAKGEAIVNMYLTPAERKKLRRRKRQEREREKPDK 119 + Y I+ I + IEHP P+ + +++M+LTP ERKKLR+RKRQE+EREK DK Sbjct 414 RLYSINLNCIKSYIEHPVPLNEDENYDDDKYLIHMFLTPQERKKLRKRKRQEKEREKQDK 473 Query 120 IRMGLLPPPPPKCKLSNLMRVLGDVAVADPSKTEKKVREQM 160 IR+GL+PPPPPK KLSNLMRV+GD A+A PSKTE VR+QM Sbjct 474 IRIGLMPPPPPKMKLSNLMRVMGDTALAQPSKTEYAVRKQM 514 > bbo:BBOV_II002150 18.m06172; hypothetical protein; K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=539 Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/139 (44%), Positives = 81/139 (58%), Gaps = 20/139 (14%) Query 42 WLSDCPAVEPWDLPLL---------KQTKTKAYE----------IDETKIDALIEHPPPI 82 W D P +E WD ++ K K ++ I+E K + IEHP I Sbjct 226 WDDDEPWMEWWDRGVIILKTGEDPFKSGNVKKHQTLDIDPDLCMINEKKFNNYIEHPCKI 285 Query 83 -ATVAKGEAIVNMYLTPAERKKLRRRKRQEREREKPDKIRMGLLPPPPPKCKLSNLMRVL 141 KG+ ++ LT ERKKLRRRKR+E+ + DKIR+GL+PPP PK KLSNL+RVL Sbjct 286 DGKRKKGKDTPSIMLTKEERKKLRRRKREEKLKAIQDKIRIGLIPPPAPKLKLSNLLRVL 345 Query 142 GDVAVADPSKTEKKVREQM 160 D +VADPS EK+VR+QM Sbjct 346 KDQSVADPSLVEKQVRDQM 364 > ath:AT1G28060 small nuclear ribonucleoprotein family protein / snRNP family protein; K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=786 Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/124 (39%), Positives = 65/124 (52%), Gaps = 14/124 (11%) Query 46 CPAVEPWDLPLLKQTKTKAYEIDET----------KIDALIEHP--PPIATVAKGEAIVN 93 P VE WD +L T + EI + K+ IEHP A Sbjct 490 IPDVEWWDANVL--TNGEYGEITDGTITESHLKIEKLTHYIEHPRPIEPPAEAAPPPPQP 547 Query 94 MYLTPAERKKLRRRKRQEREREKPDKIRMGLLPPPPPKCKLSNLMRVLGDVAVADPSKTE 153 + LT E+KKLR ++R +E+EK + IR GLL PP K K+SNLM+VLG A DP+K E Sbjct 548 LKLTKKEQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLE 607 Query 154 KKVR 157 K++R Sbjct 608 KEIR 611 > ath:AT3G55930 RNA splicing factor-related Length=437 Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Query 72 IDALIEHPPPIATVAKGEAIVN--MYLTPAERKKLRRRKRQEREREKPDKIRMGLLPPPP 129 + IEHP PI A+ + + +T ERKKLR +R +E EK + I G + P Sbjct 181 FNCHIEHPFPIEPPAEAASPPPQPLKMTKEERKKLRTLRRVAKEMEKREMISQGRVEPQK 240 Query 130 PKCKLSNLMRVLGDVAVADPSKTEKKVREQMA 161 K K+SNLM+V A +P+K EK++R + A Sbjct 241 SKVKMSNLMKVRASEATQNPTKLEKEIRTEAA 272 > sce:YDR473C PRP3, RNA3; Prp3p; K12843 U4/U6 small nuclear ribonucleoprotein PRP3 Length=469 Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 2/87 (2%) Query 75 LIEHPPPIATVAKGEAIVNMYLTPAERKKLRRRKRQEREREKPDKIRMGLLPPPPPKCKL 134 + HP P + + + + YLT ERK+LRR +R+ + KI++GLLP P PK KL Sbjct 216 YVAHPLP-EKINEAKVSIKAYLTQHERKRLRRNRRKMAREAREIKIKLGLLPKPEPKVKL 274 Query 135 SNLMRVL-GDVAVADPSKTEKKVREQM 160 SN+M V D + DP+ EK V++Q+ Sbjct 275 SNMMSVFENDQNITDPTAWEKVVKDQV 301 > ath:AT3G56790 RNA splicing factor-related Length=206 Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust. Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 0/35 (0%) Query 108 KRQEREREKPDKIRMGLLPPPPPKCKLSNLMRVLG 142 +R +E+EK IR L P K KLSNLM+VL Sbjct 162 RRVAKEKEKQKMIRQALFEPQKSKVKLSNLMKVLA 196 > ath:AT4G34420 hypothetical protein Length=491 Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 0/23 (0%) Query 47 PAVEPWDLPLLKQTKTKAYEIDE 69 P +EPWD+P + K K Y DE Sbjct 218 PNIEPWDIPFVHYPKPKTYNRDE 240 > xla:398925 stk4, MGC68762, krs2, mst1, ysk3; serine/threonine kinase 4 (EC:2.7.11.1); K04411 serine/threonine kinase 4 [EC:2.7.11.6] Length=485 Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 13/97 (13%) Query 75 LIEHPPPIATVAKGEAIVNMYLTPAERKKLRRRKRQERERE-------KPDKIRMGLLPP 127 L++HP AKGE+I+ L A+ +KL+R + ++RE E D++ +G + Sbjct 275 LLQHP--FIKAAKGESILRHLLNAAQDEKLKRTELKQREVEPEEKENVNEDEVDVGTMVQ 332 Query 128 PPPKCKLSNLMRVLGDVA-VADPSKTEK-KVREQMAA 162 K N M+ LG ++ AD + EK K+ QM Sbjct 333 AGGKD--LNTMKELGMMSEGADGTMVEKDKLETQMGT 367 > ath:AT2G01130 ATP binding / ATP-dependent helicase/ RNA binding / double-stranded RNA binding / helicase/ nucleic acid binding Length=1113 Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust. Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 0/51 (0%) Query 72 IDALIEHPPPIATVAKGEAIVNMYLTPAERKKLRRRKRQEREREKPDKIRM 122 + A++ PI TVA G ++ + +LTP ++K L + + R+ D + + Sbjct 719 LGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLAL 769 Lambda K H 0.312 0.128 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 3767900632 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40