bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_4658_orf4 Length=101 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_092130 60s ribosomal protein L13a, putative ; K0287... 67.4 1e-11 sce:YIL133C RPL16A, RPL13; Rpl16ap; K02872 large subunit ribos... 62.4 4e-10 sce:YNL069C RPL16B, RP23; Rpl16bp; K02872 large subunit riboso... 61.6 6e-10 ath:AT5G48760 60S ribosomal protein L13A (RPL13aD); K02872 lar... 53.9 1e-07 hsa:23521 RPL13A, TSTA1; ribosomal protein L13a; K02872 large ... 53.1 2e-07 ath:AT3G07110 60S ribosomal protein L13A (RPL13aA) 53.1 2e-07 xla:379822 rpl13a, MGC54018; ribosomal protein L13a; K02872 la... 51.6 6e-07 dre:560828 rpl13a, MGC56275, hm:zehp0384, wu:fa95e06, wu:fb08g... 51.2 8e-07 mmu:638236 60S ribosomal protein L13a-like 50.8 9e-07 mmu:22121 Rpl13a, 1810026N22Rik, MGC107571, Tstap198-7, tum-an... 50.8 1e-06 ath:AT3G24830 60S ribosomal protein L13A (RPL13aB); K02872 lar... 50.8 1e-06 ath:AT4G13170 60S ribosomal protein L13A (RPL13aC); K02872 lar... 50.8 1e-06 bbo:BBOV_II002800 18.m06229; ribosomal protein L13; K02872 lar... 50.1 2e-06 tpv:TP04_0388 60S ribosomal protein L13; K02872 large subunit ... 49.3 3e-06 cpv:cgd5_970 60S ribosomal protein L13A ; K02872 large subunit... 48.5 6e-06 pfa:PF10_0043 60S ribosomal protein L13, putative; K02872 larg... 48.1 6e-06 cel:M01F1.2 rpl-16; Ribosomal Protein, Large subunit family me... 43.1 2e-04 > tgo:TGME49_092130 60s ribosomal protein L13a, putative ; K02872 large subunit ribosomal protein L13Ae Length=286 Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 29/42 (69%), Positives = 36/42 (85%), Gaps = 0/42 (0%) Query 31 LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 LQV+EGVP ERKK++VVP ALR+VRL+P R+FCRLG+LS Sbjct 185 LQVFEGVPTMVERKKRMVVPSALRIVRLKPKRNFCRLGDLSS 226 > sce:YIL133C RPL16A, RPL13; Rpl16ap; K02872 large subunit ribosomal protein L13Ae Length=199 Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 2/61 (3%) Query 16 RQQQQQQMARDAAGV--LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSEL 73 R + AR A + L+V+EG+P Y++KK+VVVPQALRV+RL+PGR + LG+LS Sbjct 85 RGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTS 144 Query 74 I 74 + Sbjct 145 V 145 > sce:YNL069C RPL16B, RP23; Rpl16bp; K02872 large subunit ribosomal protein L13Ae Length=198 Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 2/61 (3%) Query 16 RQQQQQQMARDAAGV--LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSEL 73 R + AR A + L+++EG+P Y++KK+VVVPQALRV+RL+PGR + LG+LS Sbjct 84 RGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTS 143 Query 74 I 74 + Sbjct 144 V 144 > ath:AT5G48760 60S ribosomal protein L13A (RPL13aD); K02872 large subunit ribosomal protein L13Ae Length=206 Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%) Query 21 QQMARDAAGV--LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 + R AA + L+VYEGVP Y++ K++V+P AL+V+RL+ G +C LG LS Sbjct 95 HKTKRGAAALARLKVYEGVPTPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSS 148 > hsa:23521 RPL13A, TSTA1; ribosomal protein L13a; K02872 large subunit ribosomal protein L13Ae Length=203 Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 22/42 (52%), Positives = 33/42 (78%), Gaps = 0/42 (0%) Query 31 LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 L+V++G+P Y++KK++VVP AL+VVRL+P R F LG L+ Sbjct 102 LKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAH 143 > ath:AT3G07110 60S ribosomal protein L13A (RPL13aA) Length=207 Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 0/47 (0%) Query 26 DAAGVLQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 +A L+V+EGVP Y++ K++VVP AL+V+RL+ G +C LG LS Sbjct 102 NALARLKVFEGVPTPYDKIKRMVVPDALKVLRLQAGHKYCLLGRLSS 148 > xla:379822 rpl13a, MGC54018; ribosomal protein L13a; K02872 large subunit ribosomal protein L13Ae Length=231 Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 33/42 (78%), Gaps = 0/42 (0%) Query 31 LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 L+V++G+P Y+++K++VVP AL++VRL+P R F LG L+ Sbjct 130 LKVFDGIPPPYDKRKRMVVPAALKIVRLKPTRKFAFLGRLAH 171 > dre:560828 rpl13a, MGC56275, hm:zehp0384, wu:fa95e06, wu:fb08g07, wu:fd05d08; ribosomal protein L13a; K02872 large subunit ribosomal protein L13Ae Length=205 Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 33/42 (78%), Gaps = 0/42 (0%) Query 31 LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 L+V++G+P Y+++K++VVP AL++VRL+P R F LG L+ Sbjct 104 LKVFDGIPPPYDKRKRMVVPAALKIVRLKPTRKFALLGRLAH 145 > mmu:638236 60S ribosomal protein L13a-like Length=174 Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 0/42 (0%) Query 31 LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 L+V +G P Y++KK++VVP AL+VVRL+P R F LG L+ Sbjct 73 LKVLDGTPPPYDKKKRMVVPAALKVVRLKPTRTFAYLGRLAH 114 > mmu:22121 Rpl13a, 1810026N22Rik, MGC107571, Tstap198-7, tum-antigen; ribosomal protein L13A; K02872 large subunit ribosomal protein L13Ae Length=203 Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 22/42 (52%), Positives = 32/42 (76%), Gaps = 0/42 (0%) Query 31 LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 L+V +G+P Y++KK++VVP AL+VVRL+P R F LG L+ Sbjct 102 LKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAH 143 > ath:AT3G24830 60S ribosomal protein L13A (RPL13aB); K02872 large subunit ribosomal protein L13Ae Length=206 Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 2/54 (3%) Query 21 QQMARDAAGV--LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 + R AA + L+V+EGVP Y++ K++V+P AL+V+RL+ G +C LG LS Sbjct 95 HKTKRGAAALARLKVFEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSS 148 > ath:AT4G13170 60S ribosomal protein L13A (RPL13aC); K02872 large subunit ribosomal protein L13Ae Length=206 Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%) Query 21 QQMARDAAGV--LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 + R AA + L+V+EG+P Y++ K++V+P AL+V+RL+ G +C LG LS Sbjct 95 HKTKRGAAALARLKVFEGIPPPYDKIKRMVIPDALKVLRLQSGHKYCLLGRLSS 148 > bbo:BBOV_II002800 18.m06229; ribosomal protein L13; K02872 large subunit ribosomal protein L13Ae Length=202 Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 0/40 (0%) Query 31 LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGEL 70 L+ YEGVP Y++ KK VVP ALR ++L+P R CRLG++ Sbjct 101 LKTYEGVPPPYDKVKKQVVPSALRFLKLKPHRRHCRLGDV 140 > tpv:TP04_0388 60S ribosomal protein L13; K02872 large subunit ribosomal protein L13Ae Length=201 Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 0/52 (0%) Query 19 QQQQMARDAAGVLQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGEL 70 + + A L+ +EGVP KY + KK VV ALR ++L+PGR + RLG++ Sbjct 89 HKTKRGNHALKTLKTFEGVPPKYAKVKKHVVTSALRFLKLKPGRRYARLGDV 140 > cpv:cgd5_970 60S ribosomal protein L13A ; K02872 large subunit ribosomal protein L13Ae Length=204 Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%) Query 21 QQMARDAAGV--LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSELI 74 + R AA + L +G P +++ K+VVVP +LRV+RL+P R + LG LS L+ Sbjct 91 HKTPRGAAALARLTTIDGCPAPFDKVKRVVVPSSLRVLRLKPQRKYTTLGTLSSLV 146 > pfa:PF10_0043 60S ribosomal protein L13, putative; K02872 large subunit ribosomal protein L13Ae Length=202 Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 0/42 (0%) Query 31 LQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 L+V G+P Y++KKK V+P ALR RL+ R +CRLG LS Sbjct 101 LKVCVGMPYPYDKKKKYVLPSALRAFRLKKHRRYCRLGTLSS 142 > cel:M01F1.2 rpl-16; Ribosomal Protein, Large subunit family member (rpl-16); K02872 large subunit ribosomal protein L13Ae Length=202 Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Query 19 QQQQMARDAAGVLQVYEGVPVKYERKKKVVVPQALRVVRLRPGRDFCRLGELSE 72 + +A L+ YEGVP KY++ K + P A R RL+P R FC +G LS Sbjct 91 HKTNRGNEALKNLRAYEGVPAKYQKTKSLHAPSASR-FRLQPRRKFCVVGRLSH 143 Lambda K H 0.322 0.135 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2036602604 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40