bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_4723_orf1 Length=108 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_093180 NADP-specific glutamate dehydrogenase, putat... 72.4 3e-13 eco:b1761 gdhA, ECK1759, JW1750; glutamate dehydrogenase, NADP... 67.0 1e-11 pfa:PF14_0164 NADP-specific glutamate dehydrogenase; K00262 gl... 62.8 3e-10 pfa:PF14_0286 glutamate dehydrogenase, putative (EC:1.4.1.3); ... 60.8 1e-09 bbo:BBOV_IV010390 23.m06170; glutamate dehydrogenase (EC:1.4.1... 54.7 7e-08 ath:AT1G51720 glutamate dehydrogenase, putative; K00262 glutam... 50.4 1e-06 sce:YOR375C GDH1, DHE4, URE1; Gdh1p (EC:1.4.1.4); K00262 gluta... 43.9 1e-04 sce:YAL062W GDH3, FUN51; Gdh3p (EC:1.4.1.4); K00262 glutamate ... 43.5 2e-04 eco:b2770 ygcR, ECK2765, JW5441; predicted flavoprotein 29.6 2.3 > tgo:TGME49_093180 NADP-specific glutamate dehydrogenase, putative (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Length=489 Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Query 1 AREKLLAMGAKVLTLSDSEGMIYCSQGFSKEDIQRIKEAKAADSCVRVRSFADGDSIV-F 59 A EKL +GAKV+T SDS G I +GF IQR+KE K S RV FA S V F Sbjct 285 AGEKLATLGAKVMTFSDSSGYIVNEKGFPLGQIQRLKEMKETRSSTRVSEFAAKYSTVKF 344 Query 60 QNSETPWAVAADLAFPCAKENEVDD 84 + W V D+AFPCA +NE+ + Sbjct 345 VPDKRAWEVPCDIAFPCATQNEISE 369 > eco:b1761 gdhA, ECK1759, JW1750; glutamate dehydrogenase, NADP-specific (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Length=447 Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats. Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%) Query 1 AREKLLAMGAKVLTLSDSEGMIYCSQGFSKEDIQRIKEAKAADSCVRVRSFADGDSIVFQ 60 A EK + GA+V+T SDS G + GF+KE + R+ E KA+ RV +A +V+ Sbjct 247 AIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKASRDG-RVADYAKEFGLVYL 305 Query 61 NSETPWAVAADLAFPCAKENEVDDIAA 87 + PW++ D+A PCA +NE+D AA Sbjct 306 EGQQPWSLPVDIALPCATQNELDVDAA 332 > pfa:PF14_0164 NADP-specific glutamate dehydrogenase; K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Length=470 Score = 62.8 bits (151), Expect = 3e-10, Method: Composition-based stats. Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 10/86 (11%) Query 3 EKLLAMGAKVLTLSDSEGMIYCSQGFSKEDIQ---RIKEAKAADSCVRVRSFADGDSIV- 58 +KLL + KVLTLSDS G +Y GF+ E+++ +KE K R++ + + S Sbjct 269 QKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKG----RIKEYLNHSSTAK 324 Query 59 -FQNSETPWAVAADLAFPCAKENEVD 83 F N E PW V LAFPCA +NE++ Sbjct 325 YFPN-EKPWGVPCTLAFPCATQNEIN 349 > pfa:PF14_0286 glutamate dehydrogenase, putative (EC:1.4.1.3); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Length=510 Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 4/84 (4%) Query 3 EKLLAMGAKVLTLSDSEGMIYCSQGFSKEDIQRIKEAKAADSCVRVRSFADGDSIV--FQ 60 EKL+ GA VLT+SDS G I GF+KE + I + K + +R++ + F+ Sbjct 310 EKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIK-NNQRLRLKEYLKYSKTAKYFE 368 Query 61 NSETPWAVAADLAFPCAKENEVDD 84 N + PW + D+AFPCA +NE+++ Sbjct 369 N-QKPWNIPCDIAFPCATQNEINE 391 > bbo:BBOV_IV010390 23.m06170; glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Length=455 Score = 54.7 bits (130), Expect = 7e-08, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Query 3 EKLLAMGAKVLTLSDSEGMIYCSQGFSKEDIQRIKEAKAADSCVRVRSFAD-GDSIVFQN 61 EKL+ +GA +T+SDS G I +G + E ++ I K S R+ + + + F Sbjct 255 EKLIELGAVPITMSDSSGYIIEPEGITLEGLRYIMAFKNPHS-RRISEYLNYSKTATFHP 313 Query 62 SETPWAVAADLAFPCAKENEV 82 + PW +AD+AFPCA +NE+ Sbjct 314 GDKPWGESADIAFPCATQNEI 334 > ath:AT1G51720 glutamate dehydrogenase, putative; K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Length=637 Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%) Query 3 EKLLAMGAKVLTLSDSEGMIYCSQGFSKEDIQRIKEAKAADSCVRVRSFADGDSIVFQNS 62 EKL+A GA +T+SDS+G + GF + +++ K+ +R S + F + Sbjct 434 EKLIACGAHPVTVSDSKGYLVDDDGFDYMKLAFLRDIKSQQRSLRDYSKTYARAKYF-DE 492 Query 63 ETPWAVAADLAFPCAKENEVD 83 PW D+AFPCA +NEVD Sbjct 493 LKPWNERCDVAFPCASQNEVD 513 > sce:YOR375C GDH1, DHE4, URE1; Gdh1p (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Length=454 Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query 4 KLLAMGAKVLTLSDSEGMIYCSQGFSKEDIQRIKEA----KAADSCVRVRSFADGDSIVF 59 K++ +G V++LSDS+G I G + E + I A K+ + V S + + + Sbjct 235 KVIELGGTVVSLSDSKGCIISETGITSEQVADISSAKVNFKSLEQIVNEYSTFSENKVQY 294 Query 60 QNSETPWAVA--ADLAFPCAKENEV 82 PW D+A PCA +NEV Sbjct 295 IAGARPWTHVQKVDIALPCATQNEV 319 > sce:YAL062W GDH3, FUN51; Gdh3p (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Length=457 Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 18/105 (17%) Query 4 KLLAMGAKVLTLSDSEGMIYCSQGFSKEDIQRIKEAKAADSCVRVRSFAD--GDSIVFQN 61 K++ +G V++LSDS+G I G + E I I AK +R +S + + F Sbjct 236 KVIELGGIVVSLSDSKGCIISETGITSEQIHDIASAK-----IRFKSLEEIVDEYSTFSE 290 Query 62 SET-------PWAVAA--DLAFPCAKENEV--DDIAAAMSSRAEF 95 S+ PW + D+A PCA +NEV D+ A ++S +F Sbjct 291 SKMKYVAGARPWTHVSNVDIALPCATQNEVSGDEAKALVASGVKF 335 > eco:b2770 ygcR, ECK2765, JW5441; predicted flavoprotein Length=259 Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust. Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Query 60 QNSETPWAVAADLAFPCAKENE---VDDIAAAMSSRAEFGTR 98 QN +TP+ +A L +PC + E +D + + R E G R Sbjct 130 QNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLR 171 Lambda K H 0.316 0.128 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2003209916 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40