bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_4933_orf2 Length=179 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_069200 crooked neck-like protein 1, putative ; K128... 282 4e-76 ath:AT5G41770 crooked neck protein, putative / cell cycle prot... 213 3e-55 cel:M03F8.3 hypothetical protein; K12869 crooked neck 207 1e-53 hsa:51340 CRNKL1, CLF, CRN, Clf1, HCRN, MSTP021, SYF3; crooked... 205 5e-53 ath:AT5G45990 crooked neck protein, putative / cell cycle prot... 205 6e-53 dre:393920 crnkl1, MGC55327, zgc:55327; crooked neck pre-mRNA ... 202 3e-52 mmu:66877 Crnkl1, 1200013P10Rik, 5730590A01Rik, C80326, crn; C... 202 6e-52 pfa:PFD0180c CGI-201 protein, short form; K12869 crooked neck 198 7e-51 ath:AT3G13210 crooked neck protein, putative / cell cycle prot... 196 3e-50 bbo:BBOV_III004750 17.m07426; tetratricopeptide repeat domain ... 192 5e-49 tpv:TP02_0476 crooked neck protein; K12869 crooked neck 165 7e-41 sce:YLR117C CLF1, NTC77, SYF3; Clf1p; K12869 crooked neck 109 6e-24 cpv:cgd7_3690 crooked neck protein HAT repeats ; K12869 crooke... 108 1e-23 ath:AT3G51110 crooked neck protein, putative / cell cycle prot... 72.8 5e-13 dre:323855 c20orf14, fc12b02, prpf6, wu:fa05f07, wu:fc12b02, z... 50.1 4e-06 ath:AT4G03430 EMB2770 (EMBRYO DEFECTIVE 2770); RNA splicing fa... 49.3 6e-06 xla:447198 prpf6, MGC80263; PRP6 pre-mRNA processing factor 6 ... 48.9 1e-05 mmu:68879 Prpf6, 1190003A07Rik, 2610031L17Rik, ANT-1, MGC11655... 48.5 1e-05 ath:AT3G11964 RNA binding; K14792 rRNA biogenesis protein RRP5 45.4 9e-05 dre:387600 xab2, MGC198247, zgc:63498, zgc:63949; XPA binding ... 44.7 2e-04 xla:779090 pdcd11, alg-4, alg4, nfbp, rrp5; programmed cell de... 44.7 2e-04 hsa:22984 PDCD11, ALG-4, ALG4, KIAA0185, NFBP, RRP5; programme... 44.3 2e-04 mmu:18572 Pdcd11, 1110021I22Rik, ALG-4, Pdcd7, mKIAA0185; prog... 43.5 4e-04 tpv:TP04_0906 hypothetical protein 43.1 5e-04 cel:C16A3.3 let-716; LEThal family member (let-716); K14792 rR... 42.4 8e-04 bbo:BBOV_III009870 17.m07855; hypothetical protein 42.0 0.001 hsa:653889 pre-mRNA-processing factor 6-like 42.0 0.001 dre:368864 prpf39, fa10d07, si:dz261o22.3, wu:fa10d07; PRP39 p... 41.6 0.002 hsa:24148 PRPF6, ANT-1, C20orf14, Prp6, TOM, U5-102K, hPrp6; P... 41.2 0.002 ath:AT3G17040 HCF107; HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107... 40.4 0.003 sce:YBR055C PRP6, RNA6, TSM7269; Prp6p; K12855 pre-mRNA-proces... 40.4 0.003 dre:794079 pdcd11, MGC162501, cb680, im:7148359, sb:cb680, wu:... 39.3 0.008 mmu:67439 Xab2, 0610041O14Rik, AV025587; XPA binding protein 2... 38.9 0.010 mmu:328110 Prpf39, FLJ11128, MGC37077, Srcs1; PRP39 pre-mRNA p... 38.5 0.011 tpv:TP01_0797 hypothetical protein; K12855 pre-mRNA-processing... 38.5 0.012 hsa:56949 XAB2, DKFZp762C1015, HCNP, HCRN, NTC90, SYF1; XPA bi... 38.5 0.013 dre:100334796 Pre-mRNA-processing factor 39-like 38.1 0.018 hsa:55015 PRPF39, FLJ11128, FLJ20666, FLJ45460, MGC149842, MGC... 37.7 0.019 cpv:cgd5_920 Pre-mRNA splicing factor Pro1/Prp6. HAT repeat pr... 37.4 0.024 ath:AT5G28740 transcription-coupled DNA repair protein-related... 37.4 0.027 pfa:PF11_0108 U5 snRNP-associated protein, putative; K12855 pr... 37.0 0.032 bbo:BBOV_IV000660 21.m02991; XBA-binding protein 2; K12867 pre... 37.0 0.032 xla:100036801 xab2; XPA binding protein 2; K12867 pre-mRNA-spl... 37.0 0.033 pfa:PFL1735c RNA-processing protein, putative; K12867 pre-mRNA... 36.6 0.052 bbo:BBOV_IV009720 23.m06014; u5 snRNP-associated subunit, puta... 36.2 0.057 cpv:cgd7_970 Syf1p. protein with 8 HAT domains ; K12867 pre-mR... 36.2 0.060 sce:YMR229C RRP5; RNA binding protein with preference for sing... 36.2 0.064 cel:C50F2.3 hypothetical protein; K12867 pre-mRNA-splicing fac... 36.2 0.069 bbo:BBOV_IV005070 23.m05737; hypothetical protein; K14792 rRNA... 35.8 0.091 xla:734636 prpf39.1, MGC115228, prpf39; PRP39 pre-mRNA process... 35.4 0.100 > tgo:TGME49_069200 crooked neck-like protein 1, putative ; K12869 crooked neck Length=794 Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 130/177 (73%), Positives = 157/177 (88%), Gaps = 0/177 (0%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 Y+YIWISYALFEELQAKD++RCR VY K LEV+PHK FSFAK+W+L+ +FE+RQ +L++A Sbjct 496 YVYIWISYALFEELQAKDVERCRQVYVKMLEVIPHKKFSFAKIWSLYASFEVRQRDLDKA 555 Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 R IFG AI +CGK KIF AYAQLELRLG IDRCR+I+AKFIE +P NP+AWI MI+LEVL Sbjct 556 RLIFGRAIAECGKPKIFVAYAQLELRLGCIDRCRKIYAKFIELHPFNPRAWIAMIDLEVL 615 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQHV 177 AEE RARA+CE+A+ ME+M+ PEL+WKAYIDMEV WGA+DRAR+LYERLL+KTQHV Sbjct 616 AEEQARARALCELAIGMEEMDTPELLWKAYIDMEVGWGAVDRARSLYERLLEKTQHV 672 Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%) Query 23 RSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQ 82 R+V+E+ +E P K W L++ FE R L+RARK+F + ++ F + + Sbjct 293 RNVFERWMEWNPSD-----KGWMLYIHFEERCKELDRARKVFERYLSNRPSQESFLRFCK 347 Query 83 LELRLGNIDRCRQIHAKFIETYP---LNPKAWIQMIELEVLAEETERARAICEIAVSMEQ 139 E R I R R K IE P L+ +++ + E ETERA+ I + A+ Sbjct 348 FEERHRQIPRARAGFEKAIELLPEDMLDEHFFLKFAQFEERQRETERAKVIYQQALEQLP 407 Query 140 MEMPELIWKAYIDMEVNWG 158 +L+++ Y+ + +G Sbjct 408 KGESDLLYEKYVTFQKQFG 426 Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 21/191 (10%) Query 5 WISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIF 64 ++ + FEE + + + R R+ +EKA+E++P + + F FE RQ ERA+ I+ Sbjct 342 FLRFCKFEE-RHRQIPRARAGFEKAIELLPEDMLD-EHFFLKFAQFEERQRETERAKVIY 399 Query 65 GAAIGKCGKEK---IFQAYAQLELRLGNIDRCRQ--------IHAKFIETYPLNPKAWIQ 113 A+ + K + +++ Y + + G+ + ++ + + +PLN WI Sbjct 400 QQALEQLPKGESDLLYEKYVTFQKQFGDKEGIEDTVLSKRVFVYEEELHGHPLNYDCWID 459 Query 114 MIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWG--------ALDRARA 165 I LE + ++ R + E A++ + + WK Y+ + +++ ++R R Sbjct 460 YIRLEESRGDIDKIRNVYERALANVPPVLEKRFWKRYVYIWISYALFEELQAKDVERCRQ 519 Query 166 LYERLLDKTQH 176 +Y ++L+ H Sbjct 520 VYVKMLEVIPH 530 Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 20/180 (11%) Query 5 WISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIF 64 W+ Y FEE + K++DR R V+E+ L P + SF + F FE R + RAR F Sbjct 309 WMLYIHFEE-RCKELDRARKVFERYLSNRPSQE-SFLR----FCKFEERHRQIPRARAGF 362 Query 65 GAAIGKCGK----EKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWI-------- 112 AI + E F +AQ E R +R + I+ + +E P + Sbjct 363 EKAIELLPEDMLDEHFFLKFAQFEERQRETERAKVIYQQALEQLPKGESDLLYEKYVTFQ 422 Query 113 -QMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLL 171 Q + E + E+T ++ + + + W YI +E + G +D+ R +YER L Sbjct 423 KQFGDKEGI-EDTVLSKRVFVYEEELHGHPLNYDCWIDYIRLEESRGDIDKIRNVYERAL 481 Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 33/116 (28%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVP----------------------------- 34 I+++YA E L+ +DRCR +Y K +E+ P Sbjct 571 IFVAYAQLE-LRLGCIDRCRKIYAKFIELHPFNPRAWIAMIDLEVLAEEQARARALCELA 629 Query 35 ---HKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQLELRL 87 ++ + LW ++ E+ ++RAR ++ + K K+F+++A E R+ Sbjct 630 IGMEEMDTPELLWKAYIDMEVGWGAVDRARSLYERLLEKTQHVKVFKSFADFEWRI 685 > ath:AT5G41770 crooked neck protein, putative / cell cycle protein, putative; K12869 crooked neck Length=705 Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 100/176 (56%), Positives = 136/176 (77%), Gaps = 0/176 (0%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 YIY+WI+YALFEE++ +D++R R VY + L+++PH FSFAK+W L FEIRQLNL A Sbjct 383 YIYLWINYALFEEIETEDIERTRDVYRECLKLIPHSKFSFAKIWLLAAQFEIRQLNLTGA 442 Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 R+I G AIGK K+KIF+ Y ++EL+LGN+DRCR+++ +++E P N AW + ELE Sbjct 443 RQILGNAIGKAPKDKIFKKYIEIELQLGNMDRCRKLYERYLEWSPENCYAWSKYAELERS 502 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQH 176 ETERARAI E+A+S ++MPEL+WKAYID E++ G L+R RALYERLLD+T+H Sbjct 503 LVETERARAIFELAISQPALDMPELLWKAYIDFEISEGELERTRALYERLLDRTKH 558 Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 12/174 (6%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I +W+ YA +EE Q KD R RSV+E+A+E + LW + FE++ + AR Sbjct 92 IQVWVKYAQWEESQ-KDYARARSVWERAIE----GDYRNHTLWLKYAEFEMKNKFVNSAR 146 Query 62 KIFGAAIGKCGK-EKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 ++ A+ + ++++ Y +E LGNI RQI ++++ P + + W+ I+ E+ Sbjct 147 NVWDRAVTLLPRVDQLWYKYIHMEEILGNIAGARQIFERWMDWSP-DQQGWLSFIKFELR 205 Query 121 AEETERARAICEIAVSMEQMEMPEL-IWKAYIDMEVNWGALDRARALYERLLDK 173 E ERAR I E V + P++ + Y E+ G + R R++YER +K Sbjct 206 YNEIERARTIYERFV----LCHPKVSAYIRYAKFEMKGGEVARCRSVYERATEK 255 Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 9/158 (5%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W Y EE+ ++ R ++E+ ++ P + + W F+ FE+R +ERAR I Sbjct 162 LWYKYIHMEEILG-NIAGARQIFERWMDWSPDQ-----QGWLSFIKFELRYNEIERARTI 215 Query 64 FGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKA---WIQMIELEVL 120 + + K + YA+ E++ G + RCR ++ + E + +A ++ E E Sbjct 216 YERFVLCHPKVSAYIRYAKFEMKGGEVARCRSVYERATEKLADDEEAEILFVAFAEFEER 275 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWG 158 +E ERAR I + A+ E +++ ++ E +G Sbjct 276 CKEVERARFIYKFALDHIPKGRAEDLYRKFVAFEKQYG 313 Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 27/197 (13%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAF---EIRQLNLE 58 + +I YA FE ++ ++ RCRSVYE+A E KL + LFVAF E R +E Sbjct 226 VSAYIRYAKFE-MKGGEVARCRSVYERATE----KLADDEEAEILFVAFAEFEERCKEVE 280 Query 59 RARKIFGAA---IGKCGKEKIFQAYAQLELRLGN--------IDRCRQIHAKFIETYPLN 107 RAR I+ A I K E +++ + E + G+ + + R + + P N Sbjct 281 RARFIYKFALDHIPKGRAEDLYRKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKSPSN 340 Query 108 PKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWG--------A 159 +W + LE +R R I E A++ + W+ YI + +N+ Sbjct 341 YDSWFDYVRLEESVGNKDRIREIYERAIANVPPAEEKRYWQRYIYLWINYALFEEIETED 400 Query 160 LDRARALYERLLDKTQH 176 ++R R +Y L H Sbjct 401 IERTRDVYRECLKLIPH 417 Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 32/104 (30%) Query 13 ELQAKDMDRCRSVYEKALEVVPHKLFSFAK------------------------------ 42 ELQ +MDRCR +YE+ LE P ++++K Sbjct 466 ELQLGNMDRCRKLYERYLEWSPENCYAWSKYAELERSLVETERARAIFELAISQPALDMP 525 Query 43 --LWTLFVAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQLE 84 LW ++ FEI + LER R ++ + + K++ ++A+ E Sbjct 526 ELLWKAYIDFEISEGELERTRALYERLLDRTKHYKVWVSFAKFE 569 > cel:M03F8.3 hypothetical protein; K12869 crooked neck Length=747 Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 95/177 (53%), Positives = 131/177 (74%), Gaps = 0/177 (0%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 YIY+WI+YAL+EEL AKD DR R VY+ ++++PHK F+FAK+W +F FEIRQL+L A Sbjct 382 YIYLWINYALYEELVAKDFDRARQVYKACIDIIPHKTFTFAKVWIMFAHFEIRQLDLNAA 441 Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 RKI G AIGKC K+K+F+AY LEL+L DRCR+++ KF+E+ P + + WI+ ELE L Sbjct 442 RKIMGVAIGKCPKDKLFRAYIDLELQLREFDRCRKLYEKFLESSPESSQTWIKFAELETL 501 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQHV 177 +T+R+RA+ IAV ++MPEL+WKAYID E+ ++AR LYE LL +T H+ Sbjct 502 LGDTDRSRAVFTIAVQQPALDMPELLWKAYIDFEIACEEHEKARDLYETLLQRTNHI 558 Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 6/172 (3%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I IW+ YA E ++ K ++ R+V+++A+ ++P + + W + E N+ AR Sbjct 120 ISIWLQYAEME-MRCKQINHARNVFDRAITIMPRAM----QFWLKYSYMEEVIENIPGAR 174 Query 62 KIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLA 121 +IF I E+ +Q Y ELR IDR R ++ +F+ + +N + WI+ + E Sbjct 175 QIFERWIEWEPPEQAWQTYINFELRYKEIDRARSVYQRFLHVHGINVQNWIKYAKFEERN 234 Query 122 EETERARAICEIAVS-MEQMEMPELIWKAYIDMEVNWGALDRARALYERLLD 172 ARA E A+ + ++ E + A+ E +RAR +++ LD Sbjct 235 GYIGNARAAYEKAMEYFGEEDINETVLVAFALFEERQKEHERARGIFKYGLD 286 Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 9/169 (5%) Query 5 WISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIF 64 WI Y +EE ++ R RSV+E+AL+ V H+ S +W + E+R + AR +F Sbjct 89 WIKYGKWEE-SIGEIQRARSVFERALD-VDHRSIS---IWLQYAEMEMRCKQINHARNVF 143 Query 65 GAAIGKCGKEKIF-QAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEE 123 AI + F Y+ +E + NI RQI ++IE P +AW I E+ +E Sbjct 144 DRAITIMPRAMQFWLKYSYMEEVIENIPGARQIFERWIEWEPPE-QAWQTYINFELRYKE 202 Query 124 TERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLD 172 +RAR++ + + + + + W Y E G + ARA YE+ ++ Sbjct 203 IDRARSVYQRFLHVHGINVQN--WIKYAKFEERNGYIGNARAAYEKAME 249 Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 32/115 (27%) Query 13 ELQAKDMDRCRSVYEKALEVVPHKLFSFAK------------------------------ 42 ELQ ++ DRCR +YEK LE P ++ K Sbjct 465 ELQLREFDRCRKLYEKFLESSPESSQTWIKFAELETLLGDTDRSRAVFTIAVQQPALDMP 524 Query 43 --LWTLFVAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQ 95 LW ++ FEI E+AR ++ + + K++ + A+ E +GN + R+ Sbjct 525 ELLWKAYIDFEIACEEHEKARDLYETLLQRTNHIKVWISMAEFEQTIGNFEGARK 579 Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust. Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 12/101 (11%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W +Y FE + ++ ++ R +YE L+ H K+W FE N E ARK Sbjct 527 LWKAYIDFE-IACEEHEKARDLYETLLQRTNH-----IKVWISMAEFEQTIGNFEGARKA 580 Query 64 F---GAAIGKCGKEK---IFQAYAQLELRLGNIDRCRQIHA 98 F ++ KE+ + +A+ + E + G+ + +++ Sbjct 581 FERANQSLENAEKEERLMLLEAWKECETKSGDQEALKRVET 621 Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Query 94 RQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDM 153 R+ + +E P PK ++ + + L E + R E + +M++ W Y Sbjct 40 REAKERELELIPPAPKT--KITDPDELKEYQRKKRKEFEDGIRKNRMQLAN--WIKYGKW 95 Query 154 EVNWGALDRARALYERLLD 172 E + G + RAR+++ER LD Sbjct 96 EESIGEIQRARSVFERALD 114 > hsa:51340 CRNKL1, CLF, CRN, Clf1, HCRN, MSTP021, SYF3; crooked neck pre-mRNA splicing factor-like 1 (Drosophila); K12869 crooked neck Length=848 Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 93/177 (52%), Positives = 131/177 (74%), Gaps = 0/177 (0%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 YIY+WI+YAL+EEL+AKD +R R VY+ +LE++PHK F+FAK+W L+ FEIRQ NL A Sbjct 533 YIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLA 592 Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 R+ G +IGKC K K+F+ Y +LEL+L DRCR+++ KF+E P N +WI+ ELE + Sbjct 593 RRALGTSIGKCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETI 652 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQHV 177 + +RARAI E+A+S +++MPE++WK+YID E+ +R R LY RLL +TQHV Sbjct 653 LGDIDRARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHV 709 Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 12/173 (6%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I WI YA +EE K++ R RS+YE+AL+V + LW + E++ + AR Sbjct 242 ISNWIKYAQWEE-SLKEIQRARSIYERALDVD----YRNITLWLKYAEMEMKNRQVNHAR 296 Query 62 KIFGAAIGKCGK-EKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 I+ AI + + + Y +E LGN+ RQ+ +++E P +AW I E+ Sbjct 297 NIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP-EEQAWHSYINFELR 355 Query 121 AEETERARAICEIAVSMEQMEMPEL-IWKAYIDMEVNWGALDRARALYERLLD 172 +E +RAR I E V + P++ W Y E AR +YER ++ Sbjct 356 YKEVDRARTIYERFV----LVHPDVKNWIKYARFEEKHAYFAHARKVYERAVE 404 Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 7/179 (3%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I +W+ YA E ++ + ++ R+++++A+ +P + W + E N+ AR Sbjct 276 ITLWLKYAEME-MKNRQVNHARNIWDRAITTLPR----VNQFWYKYTYMEEMLGNVAGAR 330 Query 62 KIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLA 121 ++F + +E+ + +Y ELR +DR R I+ +F+ +P + K WI+ E Sbjct 331 QVFERWMEWQPEEQAWHSYINFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKH 389 Query 122 EETERARAICEIAVSMEQME-MPELIWKAYIDMEVNWGALDRARALYERLLDKTQHVNA 179 AR + E AV E M E ++ A+ E N +R R +Y+ LD+ +A Sbjct 390 AYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQDA 448 Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 6/102 (5%) Query 5 WISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIF 64 WI +A E + D+DR R++YE L + +L LW ++ FEI Q ER R ++ Sbjct 643 WIKFAELETILG-DIDRARAIYE--LAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLY 699 Query 65 GAAIGKCGKEKIFQAYAQLEL---RLGNIDRCRQIHAKFIET 103 + + K++ ++AQ EL + G++ +CRQI+ + +T Sbjct 700 RRLLQRTQHVKVWISFAQFELSSGKEGSLTKCRQIYEEANKT 741 Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Query 1 YIYIWISYALFEELQAKD--MDRCRSVYEKA 29 ++ +WIS+A FE K+ + +CR +YE+A Sbjct 708 HVKVWISFAQFELSSGKEGSLTKCRQIYEEA 738 > ath:AT5G45990 crooked neck protein, putative / cell cycle protein, putative Length=673 Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 96/176 (54%), Positives = 131/176 (74%), Gaps = 0/176 (0%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 YIY+WI+YAL+EE++ KD++R R VY + L+++PH FSFAK+W L +EIRQLNL A Sbjct 370 YIYLWINYALYEEIETKDVERTRDVYRECLKLIPHTKFSFAKIWLLAAEYEIRQLNLTGA 429 Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 R+I G AIGK K KIF+ Y ++EL+L NIDRCR+++ +F+E P N AW E E+ Sbjct 430 RQILGNAIGKAPKVKIFKKYIEMELKLVNIDRCRKLYERFLEWSPENCYAWRNYAEFEIS 489 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQH 176 ETERARAI E+A+S ++MPEL+WK YID E++ G ++ RALYERLLD+T+H Sbjct 490 LAETERARAIFELAISQPALDMPELLWKTYIDFEISEGEFEKTRALYERLLDRTKH 545 Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 9/173 (5%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I +W+ YA +EE Q D R RSV+E+ALE + LW + FE++ + AR Sbjct 78 IQVWVKYAKWEESQM-DYARARSVWERALE----GEYRNHTLWVKYAEFEMKNKFVNNAR 132 Query 62 KIFGAAIGKCGK-EKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 ++ ++ + +++++ Y +E +LGN+ RQI +++ P + KAW+ I+ E+ Sbjct 133 NVWDRSVTLLPRVDQLWEKYIYMEEKLGNVTGARQIFERWMNWSP-DQKAWLCFIKFELR 191 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDK 173 E ERAR+I E V + ++ I A +M+ G + AR +YER +DK Sbjct 192 YNEIERARSIYERFV-LCHPKVSAFIRYAKFEMKRG-GQVKLAREVYERAVDK 242 Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 92/171 (53%), Gaps = 8/171 (4%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W+ YA FE ++ K ++ R+V+++++ ++P +LW ++ E + N+ AR+I Sbjct 114 LWVKYAEFE-MKNKFVNNARNVWDRSVTLLPR----VDQLWEKYIYMEEKLGNVTGARQI 168 Query 64 FGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEV-LAE 122 F + +K + + + ELR I+R R I+ +F+ +P A+I+ + E+ Sbjct 169 FERWMNWSPDQKAWLCFIKFELRYNEIERARSIYERFVLCHP-KVSAFIRYAKFEMKRGG 227 Query 123 ETERARAICEIAVS-MEQMEMPELIWKAYIDMEVNWGALDRARALYERLLD 172 + + AR + E AV + E E+++ ++ + E ++RAR +Y+ LD Sbjct 228 QVKLAREVYERAVDKLANDEEAEILFVSFAEFEERCKEVERARFIYKFALD 278 Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 20/191 (10%) Query 6 ISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFG 65 I YA FE + + R VYE+A++ + + + L+ F FE R +ERAR I+ Sbjct 216 IRYAKFEMKRGGQVKLAREVYERAVDKLANDEEA-EILFVSFAEFEERCKEVERARFIYK 274 Query 66 AA---IGKCGKEKIFQAYAQLELRLGN--------IDRCRQIHAKFIETYPLNPKAWIQM 114 A I K E++++ + E + G+ + + R + + PLN +W Sbjct 275 FALDHIRKGRAEELYKKFVAFEKQYGDKEGIEDAIVGKKRFEYEDEVSKNPLNYDSWFDY 334 Query 115 IELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWG--------ALDRARAL 166 + LE +R R I E A++ + W+ YI + +N+ ++R R + Sbjct 335 VRLEESVGNKDRIREIYERAIANVPPAQEKRFWQRYIYLWINYALYEEIETKDVERTRDV 394 Query 167 YERLLDKTQHV 177 Y L H Sbjct 395 YRECLKLIPHT 405 Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust. Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 3/82 (3%) Query 3 YIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARK 62 Y W +YA FE + + +R R+++E A+ + LW ++ FEI + E+ R Sbjct 478 YAWRNYAEFE-ISLAETERARAIFELAISQPALDMPEL--LWKTYIDFEISEGEFEKTRA 534 Query 63 IFGAAIGKCGKEKIFQAYAQLE 84 ++ + + K++ ++A+ E Sbjct 535 LYERLLDRTKHCKVWISFAKFE 556 > dre:393920 crnkl1, MGC55327, zgc:55327; crooked neck pre-mRNA splicing factor-like 1 (Drosophila); K12869 crooked neck Length=753 Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 91/177 (51%), Positives = 129/177 (72%), Gaps = 0/177 (0%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 YIY+WI+YAL+EEL+ KD +R R VY+ LE++PHK F+FAK+W L+ FEIRQ NL+ A Sbjct 371 YIYLWINYALYEELEVKDPERTRQVYKACLELIPHKKFTFAKIWLLYGQFEIRQKNLQNA 430 Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 R+ G AIGKC K K+F+ Y +LEL+L DRCR+++ K++E P N WI+ ELE + Sbjct 431 RRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETI 490 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQHV 177 +T+R+RAI E+A+ +++MPE++WK+YID E+ D R LY+RLL +TQHV Sbjct 491 LGDTDRSRAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRLLQRTQHV 547 Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 12/173 (6%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I WI YA +EE +++ R RS+YE+AL+ V H+ + LW + E++ + AR Sbjct 80 ISNWIKYAQWEE-SLQEVQRSRSIYERALD-VDHRNIT---LWLKYAEMEMKNRQVNHAR 134 Query 62 KIFGAAIGKCGK-EKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 I+ AI + + + Y +E LGNI CRQ+ +++E P +AW I E+ Sbjct 135 NIWDRAITILPRVNQFWYKYTYMEEMLGNIAGCRQVFERWMEWEP-EEQAWHSYINFELR 193 Query 121 AEETERARAICEIAVSMEQMEMPELI-WKAYIDMEVNWGALDRARALYERLLD 172 +E ++AR+I E V M PE+ W Y E G + R R ++ER ++ Sbjct 194 YKEVDKARSIYENFV----MVHPEVKNWIKYAHFEEKHGYVARGRKVFERAVE 242 Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 82/173 (47%), Gaps = 7/173 (4%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I +W+ YA E ++ + ++ R+++++A+ ++P + W + E N+ R Sbjct 114 ITLWLKYAEME-MKNRQVNHARNIWDRAITILPR----VNQFWYKYTYMEEMLGNIAGCR 168 Query 62 KIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLA 121 ++F + +E+ + +Y ELR +D+ R I+ F+ +P K WI+ E Sbjct 169 QVFERWMEWEPEEQAWHSYINFELRYKEVDKARSIYENFVMVHP-EVKNWIKYAHFEEKH 227 Query 122 EETERARAICEIAVS-MEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDK 173 R R + E AV + ++ E ++ A+ E +R R +Y+ LD+ Sbjct 228 GYVARGRKVFERAVEFFGEEQVSENLYVAFARFEEKQKEFERVRVIYKYALDR 280 Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 35/120 (29%) Query 13 ELQAKDMDRCRSVYEKALEVVPHKLFSFAK------------------------------ 42 ELQ ++ DRCR +YEK LE P ++ K Sbjct 454 ELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDTDRSRAIFELAIGQPRLDMP 513 Query 43 --LWTLFVAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQLELRLGNID---RCRQIH 97 LW ++ FEI Q + R ++ + + K++ +YAQ EL + D RCRQ++ Sbjct 514 EVLWKSYIDFEIEQEEYDNTRGLYKRLLQRTQHVKVWISYAQFELSIDTEDRVQRCRQVY 573 Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Query 111 WIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERL 170 WI+ + E +E +R+R+I E A+ ++ + +W Y +ME+ ++ AR +++R Sbjct 83 WIKYAQWEESLQEVQRSRSIYERALDVDHRNI--TLWLKYAEMEMKNRQVNHARNIWDRA 140 Query 171 LDKTQHVN 178 + VN Sbjct 141 ITILPRVN 148 Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust. Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%) Query 1 YIYIWISYALFE-ELQAKD-MDRCRSVYEKA 29 ++ +WISYA FE + +D + RCR VYE+A Sbjct 546 HVKVWISYAQFELSIDTEDRVQRCRQVYEEA 576 > mmu:66877 Crnkl1, 1200013P10Rik, 5730590A01Rik, C80326, crn; Crn, crooked neck-like 1 (Drosophila); K12869 crooked neck Length=690 Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 91/177 (51%), Positives = 130/177 (73%), Gaps = 0/177 (0%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 YIY+W++YAL+EEL+AKD +R R VY+ +LE++PHK F+FAK+W + FEIRQ NL A Sbjct 372 YIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFA 431 Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 R+ G +IGKC K K+F+ Y +LEL+L DRCR+++ KF+E P N +WI+ ELE + Sbjct 432 RRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETI 491 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQHV 177 + ERARAI E+A+S +++MPE++WK+YID E+ +R R LY +LL +TQHV Sbjct 492 LGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQLLQRTQHV 548 Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 12/173 (6%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I WI YA +EE K++ R RS+YE+AL+V + LW + E++ + AR Sbjct 81 ISNWIKYAQWEE-SLKEIQRARSIYERALDVD----YRNITLWLKYAEMEMKNRQVNHAR 135 Query 62 KIFGAAIGKCGK-EKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 I+ AI + + + Y +E LGN+ RQ+ +++E P +AW I E+ Sbjct 136 NIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQP-EEQAWHSYINFELR 194 Query 121 AEETERARAICEIAVSMEQMEMPELI-WKAYIDMEVNWGALDRARALYERLLD 172 +E ERAR I E V + P + W Y E AR +YER ++ Sbjct 195 YKEVERARTIYERFV----LVHPAVKNWIKYARFEEKHAYFAHARKVYERAVE 243 Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 7/173 (4%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I +W+ YA E ++ + ++ R+++++A+ +P + W + E N+ AR Sbjct 115 ITLWLKYAEME-MKNRQVNHARNIWDRAITTLPR----VNQFWYKYTYMEEMLGNVAGAR 169 Query 62 KIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLA 121 ++F + +E+ + +Y ELR ++R R I+ +F+ +P K WI+ E Sbjct 170 QVFERWMEWQPEEQAWHSYINFELRYKEVERARTIYERFVLVHPA-VKNWIKYARFEEKH 228 Query 122 EETERARAICEIAVSMEQME-MPELIWKAYIDMEVNWGALDRARALYERLLDK 173 AR + E AV E M E ++ A+ E N +R R +Y+ LD+ Sbjct 229 AYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDR 281 Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 35/120 (29%) Query 13 ELQAKDMDRCRSVYEKALEVVPHKLFSFAK------------------------------ 42 ELQ ++ DRCR +YEK LE P S+ K Sbjct 455 ELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMP 514 Query 43 --LWTLFVAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQLEL---RLGNIDRCRQIH 97 LW ++ FEI Q ER R ++ + + K++ ++AQ EL + G++ +CRQI+ Sbjct 515 EVLWKSYIDFEIEQEETERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVAKCRQIY 574 Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Query 111 WIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERL 170 WI+ + E +E +RAR+I E A+ ++ + +W Y +ME+ ++ AR +++R Sbjct 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNI--TLWLKYAEMEMKNRQVNHARNIWDRA 141 Query 171 LDKTQHVN 178 + VN Sbjct 142 ITTLPRVN 149 > pfa:PFD0180c CGI-201 protein, short form; K12869 crooked neck Length=780 Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 87/176 (49%), Positives = 126/176 (71%), Gaps = 0/176 (0%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 YIY+WI+Y++FEEL A+++ R R VY ++++ F+F K++ L+ FE+RQLN+ +A Sbjct 369 YIYLWINYSIFEELYAQNIQRARDVYNNIIKILSSYEFTFKKIFILYATFELRQLNVNKA 428 Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 R IF A+ EKIF+ + + EL+LGNI CR ++AK++E +P N KAWI MI E+ Sbjct 429 RSIFNNALQTIPNEKIFEKFCEFELKLGNIRECRNVYAKYVEAFPFNSKAWISMINFELS 488 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQH 176 +E ERAR I EIA++++ M++PELIWK YIDME+N D AR LY+RLL+ TQH Sbjct 489 LDEVERARQIAEIAINLDDMKLPELIWKNYIDMEINLQEYDNARKLYDRLLNITQH 544 Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 12/173 (6%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I +I Y L+E ++ KD++RCRS++E+AL + ++ LW ++ E+ N+ AR Sbjct 71 ISTYIKYGLWE-IKQKDIERCRSIFERALNID----YTNKNLWLKYIEVELINKNINSAR 125 Query 62 KIFGAAIGKCGKEKIF-QAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 + + E IF + YA LE L N R I+ ++I+ + ++ +++ I E Sbjct 126 NLLERVVLLLPLENIFWKKYAHLEEILNNYVNARNIYERWIK-FKIDESSFLCYIYFEER 184 Query 121 AEETERARAICE-IAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLD 172 E + R I E + VS+ ++E + +I E + + RARA YE+ ++ Sbjct 185 CNEINKCREIFERLIVSIPKLEC----FYKFIKFEKKYKNIVRARAAYEKCIE 233 Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 4/99 (4%) Query 5 WISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIF 64 WIS FE L +++R R + E A+ + KL +W ++ EI + ARK++ Sbjct 479 WISMINFE-LSLDEVERARQIAEIAINLDDMKLPEL--IWKNYIDMEINLQEYDNARKLY 535 Query 65 GAAIGKCGKEKIFQAYAQLE-LRLGNIDRCRQIHAKFIE 102 + K++++YA+ + L +I+ CR+I + IE Sbjct 536 DRLLNITQHYKVYKSYAEFTYIYLDDIEMCRKILEEGIE 574 Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 33/188 (17%) Query 5 WISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIF 64 ++ Y FEE + ++++CR ++E+ + +P KL F K F+ FE + N+ RAR Sbjct 175 FLCYIYFEE-RCNEINKCREIFERLIVSIP-KLECFYK----FIKFEKKYKNIVRAR--- 225 Query 65 GAAIGKCGK--------EKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNP-----KAW 111 AA KC + E + + E +RC++I+ + ++ P N K + Sbjct 226 -AAYEKCIELLPSCYIDENFYIHFCNFEEEQNEYERCKKIYIEALKILPKNKSELLYKNF 284 Query 112 IQMIELEVLAEETERARAICEIAVSMEQMEMPEL---IWKAYIDM-EVNWGALD------ 161 +Q + +E + I E ++++ + IW YI + E N ++ Sbjct 285 LQFQKKYANKDELHESLLIKERIFYEDELKKNKNDYDIWFNYIKLEESNINNINKEKCII 344 Query 162 RARALYER 169 R R LYER Sbjct 345 RIRDLYER 352 > ath:AT3G13210 crooked neck protein, putative / cell cycle protein, putative Length=657 Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 93/176 (52%), Positives = 127/176 (72%), Gaps = 0/176 (0%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 YIY+WI+YA F E+ +D++ R VY L+++PH FSFAK+W L EIRQLNL A Sbjct 340 YIYLWINYAFFAEMVTEDVESTRDVYRACLKLIPHSKFSFAKIWLLAAQHEIRQLNLTGA 399 Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 R+I G AIGK K+KIF+ Y ++EL+L NIDRCR+++ +++E P N AW + E E+ Sbjct 400 RQILGNAIGKAPKDKIFKKYIEIELQLRNIDRCRKLYERYLEWSPGNCYAWRKYAEFEMS 459 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQH 176 ETER RAI E+A+S ++MPEL+WK YID E++ G L+R RALYERLLD+T+H Sbjct 460 LAETERTRAIFELAISQPALDMPELLWKTYIDFEISEGELERTRALYERLLDRTKH 515 Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 88/175 (50%), Gaps = 13/175 (7%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W+ YA FE ++ K ++ R+V+++A+ ++P +LW F+ E + N+ AR+I Sbjct 93 VWVKYADFE-MKNKSVNEARNVWDRAVSLLPR----VDQLWYKFIHMEEKLGNIAGARQI 147 Query 64 FGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEE 123 I ++ + + + EL+ I+ R I+ +F+ +P A+I+ + E+ + Sbjct 148 LERWIHCSPDQQAWLCFIKFELKYNEIECARSIYERFVLCHP-KVSAYIRYAKFEMKHGQ 206 Query 124 TERARAICEIAVS-MEQMEMPELIWKAYIDMEVNWG-ALD-----RARALYERLL 171 E A + E A + E E+++ A+ + E + ALD RA LY + + Sbjct 207 VELAMKVFERAKKELADDEEAEILFVAFAEFEEQYKFALDQIPKGRAENLYSKFV 261 Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Query 41 AKLWTLFVAFEIRQLNLERARKIFGAAIGKCGK-EKIFQAYAQLELRLGNIDRCRQIHAK 99 ++W + FE++ ++ AR ++ A+ + ++++ + +E +LGNI RQI + Sbjct 91 TQVWVKYADFEMKNKSVNEARNVWDRAVSLLPRVDQLWYKFIHMEEKLGNIAGARQILER 150 Query 100 FIETYPLNPKAWIQMIELEVLAEETERARAICE 132 +I P + +AW+ I+ E+ E E AR+I E Sbjct 151 WIHCSP-DQQAWLCFIKFELKYNEIECARSIYE 182 Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust. Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 32/104 (30%) Query 13 ELQAKDMDRCRSVYEKALEVVPHKLFSFAK------------------------------ 42 ELQ +++DRCR +YE+ LE P +++ K Sbjct 423 ELQLRNIDRCRKLYERYLEWSPGNCYAWRKYAEFEMSLAETERTRAIFELAISQPALDMP 482 Query 43 --LWTLFVAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQLE 84 LW ++ FEI + LER R ++ + + K++ +A+ E Sbjct 483 ELLWKTYIDFEISEGELERTRALYERLLDRTKHCKVWVDFAKFE 526 Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 8/116 (6%) Query 59 RARKIFGAAIGKCG-KEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIEL 117 R RK F I + +++ YA E++ +++ R + + + P + W + I + Sbjct 75 RRRKEFEDQIRRARLNTQVWVKYADFEMKNKSVNEARNVWDRAVSLLPRVDQLWYKFIHM 134 Query 118 EVLAEETERARAICE--IAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLL 171 E AR I E I S +Q W +I E+ + ++ AR++YER + Sbjct 135 EEKLGNIAGARQILERWIHCSPDQQ-----AWLCFIKFELKYNEIECARSIYERFV 185 Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/196 (21%), Positives = 78/196 (39%), Gaps = 50/196 (25%) Query 5 WISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIF 64 W+ + FE L+ +++ RS+YE+ + P + + FE++ +E A K+F Sbjct 161 WLCFIKFE-LKYNEIECARSIYERFVLCHPK-----VSAYIRYAKFEMKHGQVELAMKVF 214 Query 65 GAAIGKCGKEK----IFQAYAQLE----LRLGNIDRCR--QIHAKFI------------- 101 A + ++ +F A+A+ E L I + R +++KF+ Sbjct 215 ERAKKELADDEEAEILFVAFAEFEEQYKFALDQIPKGRAENLYSKFVAFEKQNGDKEGIE 274 Query 102 ---------------ETYPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPEL- 145 PLN +W + LE +R R I E AV+ + PE Sbjct 275 DAIIGKRRCQYEDEVRKNPLNYDSWFDFVRLEETVGNKDRIREIYERAVA--NVPPPEAQ 332 Query 146 ---IWKAYIDMEVNWG 158 W+ YI + +N+ Sbjct 333 EKRYWQRYIYLWINYA 348 > bbo:BBOV_III004750 17.m07426; tetratricopeptide repeat domain containing protein; K12869 crooked neck Length=665 Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 85/177 (48%), Positives = 122/177 (68%), Gaps = 3/177 (1%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 Y Y+W+ YA+F EL + +DR +VY KAL+V+P FAK + L +RQ +L+ Sbjct 379 YSYLWVGYAIFSELTLQQLDRAVAVYRKALQVLPK---DFAKFYILLAELYLRQGDLDSM 435 Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 RK FG +G+C K K+F+ YAQ+EL+LGN+DRCR IHAK+IET+P P++W+ IELE++ Sbjct 436 RKTFGLGLGQCKKPKLFETYAQIELKLGNLDRCRHIHAKYIETWPFKPESWLSFIELELM 495 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQHV 177 E +R R +CE A++M+QM+MPE +W YI++E W R +YERLL KT H+ Sbjct 496 LNERKRVRGLCEAAIAMDQMDMPETVWNRYIEIEREWQQYAHVRNIYERLLLKTTHI 552 Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 7/133 (5%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 ++ WI YAL+E Q +D R RSV+E+AL+V P+ + LW ++ E++ N+ A Sbjct 72 HMGTWIKYALWEANQ-QDFRRARSVFERALQVDPNNV----NLWLRYIETEMKNKNVNAA 126 Query 61 RKIFGAAIGKCGK-EKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEV 119 R +F + + ++ + YA E LGN R + +++E P + ++W+ I+ E Sbjct 127 RNLFDRVVSLLPRVDQFWFKYAHFEELLGNYAGARTVFERWMEWNP-DDRSWMLYIKFEE 185 Query 120 LAEETERARAICE 132 E +R R I E Sbjct 186 RCGELDRCRQIFE 198 Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 40/203 (19%) Query 5 WISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIF 64 ++ +A FE+ Q K+ R+ Y K LE++P +L + + + F AFE +Q NL A K++ Sbjct 210 FLKFAKFEQRQ-KNYPLARAAYVKCLEIIPPELLT-EEFFLKFAAFETQQGNLSGAEKVY 267 Query 65 GAAIG---KCGKEKIFQAYAQLELR------LGNI---DRCRQIHAKFIETYPLNPKAWI 112 +G + E++++++ + + + N+ R + + I++ P N W Sbjct 268 EQGLGILPRESSEQLYRSFVSFQKQHRDRETIDNLVVTKRRNEYEEQLIDS-PCNYDIWF 326 Query 113 QMIELE---------VLAEET----ERARAICEI---AVSMEQMEMPELIWKAY------ 150 I +E L +++ +RAR +CE+ A+S +W+ Y Sbjct 327 DYIRMEEQQLGPHATSLPDDSHTDAQRAR-VCELYERAISNLPQVDDRRLWRRYSYLWVG 385 Query 151 --IDMEVNWGALDRARALYERLL 171 I E+ LDRA A+Y + L Sbjct 386 YAIFSELTLQQLDRAVAVYRKAL 408 Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust. Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 32/124 (25%) Query 13 ELQAKDMDRCRSVYEKALEVVPHKL---FSFAKL-------------------------- 43 EL+ ++DRCR ++ K +E P K SF +L Sbjct 459 ELKLGNLDRCRHIHAKYIETWPFKPESWLSFIELELMLNERKRVRGLCEAAIAMDQMDMP 518 Query 44 ---WTLFVAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKF 100 W ++ E R I+ + K K+F +Y + E G D R I + Sbjct 519 ETVWNRYIEIEREWQQYAHVRNIYERLLLKTTHIKVFLSYCEFEFTSGFPDNARAIAERA 578 Query 101 IETY 104 +E Y Sbjct 579 LEYY 582 > tpv:TP02_0476 crooked neck protein; K12869 crooked neck Length=657 Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 79/177 (44%), Positives = 111/177 (62%), Gaps = 4/177 (2%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 Y Y+WI YA F ELQ +R +Y K+L+++P F+K++ +R +L++ Sbjct 377 YSYLWIFYAFFSELQLDSKERAEEIYLKSLQILPR---DFSKIYIYLSQLYLRMGDLKKM 433 Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120 R + G AIG C KEKIF+ Y+ +EL+LGNIDRCR I K++E YP N K+W+ I E+L Sbjct 434 RSVMGNAIGLCKKEKIFETYSDIELKLGNIDRCRIIFTKYVEIYPYNYKSWLAYINFELL 493 Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQHV 177 E R R +CE A+ MEQM PE IW YI +E N+ + ALY++LL KTQH+ Sbjct 494 LNEINRVRKLCEYAIEMEQMNNPEAIWNKYISIEKNY-SYSNVIALYKKLLQKTQHI 549 Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 11/133 (8%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60 +I WI YA++E Q ++ R RS++E+AL V P+ LW ++ E++ N+ A Sbjct 72 HIGTWIKYAVWEANQ-QEFRRARSIFERALLVDPNN----PSLWLRYIETEMKNKNINSA 126 Query 61 RKIFGAAIGKCGKEKIFQ---AYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIEL 117 R +F + C +I Q YA E LGN R I+ +++E P + KAW+ I+ Sbjct 127 RNLFDRVV--CLLPRIDQFWFKYAHFEELLGNYAGARSIYERWMEWNPED-KAWMLYIKF 183 Query 118 EVLAEETERARAI 130 E E +R R+I Sbjct 184 EERCGEVDRCRSI 196 Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 6/95 (6%) Query 80 YAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQ 139 YA E R R I + + P NP W++ IE E+ + AR + + V + Sbjct 79 YAVWEANQQEFRRARSIFERALLVDPNNPSLWLRYIETEMKNKNINSARNLFDRVVCL-- 136 Query 140 MEMPEL--IWKAYIDMEVNWGALDRARALYERLLD 172 +P + W Y E G AR++YER ++ Sbjct 137 --LPRIDQFWFKYAHFEELLGNYAGARSIYERWME 169 Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query 110 AWIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 WI+ E +E RAR+I E A+ ++ P L W YI+ E+ ++ AR L++R Sbjct 75 TWIKYAVWEANQQEFRRARSIFERALLVDP-NNPSL-WLRYIETEMKNKNINSARNLFDR 132 Query 170 LL 171 ++ Sbjct 133 VV 134 > sce:YLR117C CLF1, NTC77, SYF3; Clf1p; K12869 crooked neck Length=687 Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 63/181 (34%), Positives = 103/181 (56%), Gaps = 5/181 (2%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALE-VVPHKLFSFAKLWTLFVAFEIRQLNLER 59 YIY+W+ Y + EL+ ++ ++++ ++ ++PHK F+F+K+W ++ F IR ++ + Sbjct 363 YIYLWMRYICYVELELENSLLEEELFQRLIDDIIPHKHFTFSKIWLMYAKFLIRHDDVPK 422 Query 60 ARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEV 119 ARKI G AIG C K K F+ Y +LE++L DR R+I+ KFIE P + + W Q ELE Sbjct 423 ARKILGKAIGLCPKAKTFKGYIELEVKLKEFDRVRKIYEKFIEFQPSDLQIWSQYGELEE 482 Query 120 LAEETERARAICEIAVSMEQ----MEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQ 175 + +R R I IA+ E ++ + YI E ++AR LY R L+ Q Sbjct 483 NLGDWDRVRGIYTIALDENSDFLTKEAKIVLLQKYITFETESQEFEKARKLYRRYLELNQ 542 Query 176 H 176 + Sbjct 543 Y 543 Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 12/170 (7%) Query 5 WISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIF 64 WI YA FE ++ DM R RS++E+AL V SF LW ++ E++ + AR + Sbjct 68 WIRYAQFE-IEQHDMRRARSIFERALLVDS----SFIPLWIRYIDAELKVKCINHARNLM 122 Query 65 GAAIGKCGK-EKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEE 123 AI + +K++ Y +E L N++ R ++ K+ P AW ++ E+ + Sbjct 123 NRAISTLPRVDKLWYKYLIVEESLNNVEIVRSLYTKWCSLEP-GVNAWNSFVDFEIRQKN 181 Query 124 TERARAICEIAVSMEQMEMPEL-IWKAYIDMEVNWGALDRARALYERLLD 172 R I V M P++ W ++ E G + R++Y +D Sbjct 182 WNGVREIYSKYV----MAHPQMQTWLKWVRFENRHGNTEFTRSVYSLAID 227 Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 19/169 (11%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W Y + EE +++ RS+Y K + P W FV FEIRQ N R+I Sbjct 135 LWYKYLIVEE-SLNNVEIVRSLYTKWCSLEPG-----VNAWNSFVDFEIRQKNWNGVREI 188 Query 64 FGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYP--LNPKAWIQM------- 114 + + + + + + + E R GN + R +++ I+T N + W M Sbjct 189 YSKYVMAHPQMQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEVAKLVN 248 Query 115 --IELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALD 161 E +E ER+ A+ +IA+ E+ +L+ +D E +G ++ Sbjct 249 SFAHWEAAQQEYERSSALYQIAI--EKWPSNQLLKAGLLDFEKQFGDIN 295 Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 11/109 (10%) Query 13 ELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIG--- 69 E++ K+ DR R +YEK +E P L ++W+ + E + +R R I+ A+ Sbjct 447 EVKLKEFDRVRKIYEKFIEFQPSDL----QIWSQYGELEENLGDWDRVRGIYTIALDENS 502 Query 70 ----KCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQM 114 K K + Q Y E ++ R+++ +++E +P++WI+ Sbjct 503 DFLTKEAKIVLLQKYITFETESQEFEKARKLYRRYLELNQYSPQSWIEF 551 Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query 92 RCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYI 151 R R + +++ L+ WI+ + E+ + RAR+I E A+ ++ +P +W YI Sbjct 49 RKRTEYEGYLKRNRLDMGQWIRYAQFEIEQHDMRRARSIFERALLVDSSFIP--LWIRYI 106 Query 152 DMEVNWGALDRARALYERLLDKTQHVN 178 D E+ ++ AR L R + V+ Sbjct 107 DAELKVKCINHARNLMNRAISTLPRVD 133 Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 35/136 (25%) Query 44 WTLFVAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIET 103 W + FEI Q ++ RAR IF +R + + FI Sbjct 68 WIRYAQFEIEQHDMRRARSIF--------------------------ERALLVDSSFI-- 99 Query 104 YPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRA 163 PL WI+ I+ E+ + AR + A+S + + +W Y+ +E + ++ Sbjct 100 -PL----WIRYIDAELKVKCINHARNLMNRAIST--LPRVDKLWYKYLIVEESLNNVEIV 152 Query 164 RALYERLLDKTQHVNA 179 R+LY + VNA Sbjct 153 RSLYTKWCSLEPGVNA 168 > cpv:cgd7_3690 crooked neck protein HAT repeats ; K12869 crooked neck Length=736 Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats. Identities = 52/138 (37%), Positives = 88/138 (63%), Gaps = 0/138 (0%) Query 40 FAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAK 99 FAK++ F ++R +L +ARKI G +G+ +F Y +E +LGN DRCR + K Sbjct 461 FAKVFIYFSNHQLRIGDLNKARKILGIGLGRVPCINLFDHYIDIEFKLGNFDRCRVLFTK 520 Query 100 FIETYPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGA 159 +IE P++ +WI+ ++ E E +R +I E A+SM +++ PE+IW+ YI++ +N Sbjct 521 YIEYDPVSTNSWIKYMQFEYNLCEIKRVISIAESAISMPELDSPEIIWQYYIELMINEKN 580 Query 160 LDRARALYERLLDKTQHV 177 ++ A +Y+RLL+KTQH+ Sbjct 581 IEFADIIYKRLLEKTQHI 598 Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Query 43 LWTLFVAFEIRQLNLERARKIFGAAI-GKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFI 101 L+ + +E Q N++ +R IF I +I++ Y +LE+ GNI+ R + + Sbjct 104 LYLSYAKWESLQNNIKNSRSIFERGILVNYENVRIWREYIKLEITNGNINNARNLFERVT 163 Query 102 ETYPLNPKAWIQMIELEVLAEETERARAI 130 P + WI+ I++E++ + R I Sbjct 164 HLLPRIDEFWIKYIQMELILKNYINVRHI 192 Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 7/117 (5%) Query 59 RARKIFGAAIG-KCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIEL 117 R RK F +I K K ++ +YA+ E NI R I + I N + W + I+L Sbjct 86 RKRKEFEDSIRRKRWKISLYLSYAKWESLQNNIKNSRSIFERGILVNYENVRIWREYIKL 145 Query 118 EVLAEETERARAICEIAVSMEQMEMPEL--IWKAYIDMEVNWGALDRARALYERLLD 172 E+ AR + E + +P + W YI ME+ R +Y + +D Sbjct 146 EITNGNINNARNLFERVTHL----LPRIDEFWIKYIQMELILKNYINVRHIYRKWID 198 Score = 32.7 bits (73), Expect = 0.65, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 6/117 (5%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 + IW Y E + +++ R+++E+ V H L + W ++ E+ N R Sbjct 136 VRIWREYIKLE-ITNGNINNARNLFER----VTHLLPRIDEFWIKYIQMELILKNYINVR 190 Query 62 KIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELE 118 I+ I I+ Y++ E G I R + I +YP + +I+ I+ E Sbjct 191 HIYRKWIDWKPDPSIYIQYSKFEEECGEIKSARGVMKDLIISYP-DESNFIEYIKFE 246 Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 7/93 (7%) Query 13 ELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGKC- 71 E + + DRCR ++ K +E P S W ++ FE ++R I +AI Sbjct 505 EFKLGNFDRCRVLFTKYIEYDPVSTNS----WIKYMQFEYNLCEIKRVISIAESAISMPE 560 Query 72 --GKEKIFQAYAQLELRLGNIDRCRQIHAKFIE 102 E I+Q Y +L + NI+ I+ + +E Sbjct 561 LDSPEIIWQYYIELMINEKNIEFADIIYKRLLE 593 > ath:AT3G51110 crooked neck protein, putative / cell cycle protein, putative Length=413 Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 98/175 (56%), Gaps = 9/175 (5%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W+ YA +EE Q KD DR RSV+E+ALE ++ + LW + FE+R ++ AR + Sbjct 73 VWVRYADWEESQ-KDHDRARSVWERALEDESYRNHT---LWLKYAEFEMRNKSVNHARNV 128 Query 64 FGAAIGKCGK-EKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAE 122 + A+ + ++ + Y +E LGNID R+I ++++ P + +AW+ I+ E+ Sbjct 129 WDRAVKILPRVDQFWYKYIHMEEILGNIDGARKIFERWMDWSP-DQQAWLCFIKFELRYN 187 Query 123 ETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQHV 177 E ER+R+I E V + + I A +M+ + +L AR +YER ++ + V Sbjct 188 EIERSRSIYERFV-LCHPKASSFIRYAKFEMKNSQVSL--ARIVYERAIEMLKDV 239 Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 92/171 (53%), Gaps = 8/171 (4%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W+ YA FE ++ K ++ R+V+++A++++P + W ++ E N++ ARKI Sbjct 108 LWLKYAEFE-MRNKSVNHARNVWDRAVKILPR----VDQFWYKYIHMEEILGNIDGARKI 162 Query 64 FGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEE 123 F + ++ + + + ELR I+R R I+ +F+ +P ++I+ + E+ + Sbjct 163 FERWMDWSPDQQAWLCFIKFELRYNEIERSRSIYERFVLCHP-KASSFIRYAKFEMKNSQ 221 Query 124 TERARAICEIAVSM--EQMEMPELIWKAYIDMEVNWGALDRARALYERLLD 172 AR + E A+ M + E E+I+ A+ + E ++RAR LY+ LD Sbjct 222 VSLARIVYERAIEMLKDVEEEAEMIFVAFAEFEELCKEVERARFLYKYALD 272 Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 10/159 (6%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 W Y EE+ ++D R ++E+ ++ P + + W F+ FE+R +ER+R I Sbjct 142 FWYKYIHMEEILG-NIDGARKIFERWMDWSPDQ-----QAWLCFIKFELRYNEIERSRSI 195 Query 64 FGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETY-PLNPKA---WIQMIELEV 119 + + K F YA+ E++ + R ++ + IE + +A ++ E E Sbjct 196 YERFVLCHPKASSFIRYAKFEMKNSQVSLARIVYERAIEMLKDVEEEAEMIFVAFAEFEE 255 Query 120 LAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWG 158 L +E ERAR + + A+ E ++K ++ E +G Sbjct 256 LCKEVERARFLYKYALDHIPKGRAEDLYKKFVAFEKQYG 294 Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 19/34 (55%), Positives = 28/34 (82%), Gaps = 0/34 (0%) Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVP 34 YIY+WI YALFEE+ A+D++R R+VY + L ++P Sbjct 364 YIYLWIDYALFEEILAEDVERTRAVYRECLNLIP 397 Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 20/186 (10%) Query 6 ISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFG 65 I YA FE ++ + R VYE+A+E++ ++ F FE +ERAR ++ Sbjct 210 IRYAKFE-MKNSQVSLARIVYERAIEMLKDVEEEAEMIFVAFAEFEELCKEVERARFLYK 268 Query 66 AA---IGKCGKEKIFQAYAQLELRLGN--------IDRCRQIHAKFIETYPLNPKAWIQM 114 A I K E +++ + E + GN + R + + + PLN +W Sbjct 269 YALDHIPKGRAEDLYKKFVAFEKQYGNKEGIDDAIVGRRKLQYEGEVRKNPLNYDSWFDY 328 Query 115 IELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWG--------ALDRARAL 166 I LE + +R R + E A++ + + W+ YI + +++ ++R RA+ Sbjct 329 ISLEETLGDKDRIREVYERAIANVPLAEEKRYWQRYIYLWIDYALFEEILAEDVERTRAV 388 Query 167 YERLLD 172 Y L+ Sbjct 389 YRECLN 394 Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 5/113 (4%) Query 57 LERARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIE 116 L+ AR+ + I + K+KI + E RL R R+ I N + W++ + Sbjct 24 LKEAREREDSRILRPPKQKITDSDELAEYRL----RRRKEFEDQIRGAKTNSQVWVRYAD 79 Query 117 LEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 E ++ +RAR++ E A+ E L W Y + E+ +++ AR +++R Sbjct 80 WEESQKDHDRARSVWERALEDESYRNHTL-WLKYAEFEMRNKSVNHARNVWDR 131 > dre:323855 c20orf14, fc12b02, prpf6, wu:fa05f07, wu:fc12b02, zgc:65913; c20orf14 homolog (H. sapiens); K12855 pre-mRNA-processing factor 6 Length=944 Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 6/154 (3%) Query 16 AKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEK 75 A D+ RS+ A + P+ ++W V E ERAR++ A + Sbjct 624 AGDVPAARSILALAFQANPNS----EEIWLAAVKLESENNEYERARRLLAKARSSAPTAR 679 Query 76 IFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAV 135 +F +LE LGNI+ ++ + ++ Y PK W+ ++E +E +RAR + Sbjct 680 VFMKSVRLEWVLGNIEAAHELCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYNQGL 739 Query 136 SMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 M +W +E G L RARA+ E+ Sbjct 740 KKCPHSMS--LWLLLSRLEEKVGQLTRARAILEK 771 > ath:AT4G03430 EMB2770 (EMBRYO DEFECTIVE 2770); RNA splicing factor, transesterification mechanism; K12855 pre-mRNA-processing factor 6 Length=1029 Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 6/151 (3%) Query 16 AKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEK 75 A D+ R++ ++A +P+ ++W E ERAR + A + G E+ Sbjct 706 AGDVPAARAILQEAYAAIPNS----EEIWLAAFKLEFENKEPERARMLLAKARERGGTER 761 Query 76 IFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAV 135 ++ A +E LGN++ R++ + ++ +P K W+ + +LE + E+AR + + Sbjct 762 VWMKSAIVERELGNVEEERRLLNEGLKQFPTFFKLWLMLGQLEERFKHLEQARKAYDTGL 821 Query 136 SMEQMEMPELIWKAYIDMEVNWGALDRARAL 166 +P +W + D+E L++ARA+ Sbjct 822 KHCPHCIP--LWLSLADLEEKVNGLNKARAI 850 Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 8/136 (5%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I +W+S A EE + +++ R++ A + P A+LW + E+R N A Sbjct 828 IPLWLSLADLEE-KVNGLNKARAILTTARKKNP----GGAELWLAAIRAELRHDNKREAE 882 Query 62 KIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLA 121 + A+ C K I A A +E+ + + I A ++ +P I + +L Sbjct 883 HLMSKALQDCPKSGILWA-ADIEMAPRPRRKTKSIDA--MKKCDRDPHVTIAVAKLFWQD 939 Query 122 EETERARAICEIAVSM 137 ++ E+ARA E AV++ Sbjct 940 KKVEKARAWFERAVTV 955 > xla:447198 prpf6, MGC80263; PRP6 pre-mRNA processing factor 6 homolog; K12855 pre-mRNA-processing factor 6 Length=948 Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 6/154 (3%) Query 16 AKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEK 75 A D+ RS+ A + P+ ++W V E ERAR++ A + Sbjct 628 AGDVPAARSILALAFQANPNS----EEIWLAAVKLESENNEYERARRLLAKARSSAPTAR 683 Query 76 IFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAV 135 +F +LE LGNI+ + + + + Y PK W+ ++E E+TE+AR Sbjct 684 VFMKSVKLEWVLGNIEAAQDLCEEALRHYEDFPKLWMMKGQIEEQMEQTEKARDAYN--Q 741 Query 136 SMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 +++ +W +E G L RARA+ E+ Sbjct 742 GLKKCIHSTSLWLLLSRLEEKVGQLTRARAILEK 775 > mmu:68879 Prpf6, 1190003A07Rik, 2610031L17Rik, ANT-1, MGC11655, MGC36967, MGC38351, U5-102K; PRP6 pre-mRNA splicing factor 6 homolog (yeast); K12855 pre-mRNA-processing factor 6 Length=941 Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 6/154 (3%) Query 16 AKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEK 75 A D+ RS+ A + P+ ++W V E ERAR++ A + Sbjct 621 AGDVPAARSILALAFQANPNS----EEIWLAAVKLESENNEYERARRLLAKARSSAPTAR 676 Query 76 IFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAV 135 +F +LE LGNI +++ + + Y PK W+ ++E E E+AR + Sbjct 677 VFMKSVKLEWVLGNISAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGL 736 Query 136 SMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 P +W +E G L RARA+ E+ Sbjct 737 KKCPHSTP--LWLLLSRLEEKIGQLTRARAILEK 768 Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query 39 SFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKE-KIFQAYAQLELRLGNIDRCRQIH 97 F KLW + E + +E+AR+ + + KC ++ ++LE ++G + R R I Sbjct 707 DFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAIL 766 Query 98 AKFIETYPLNPKAWIQMIELEVLA 121 K P NP W++ + LE A Sbjct 767 EKSRLKNPKNPGLWLESVRLEYRA 790 > ath:AT3G11964 RNA binding; K14792 rRNA biogenesis protein RRP5 Length=1896 Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 13/176 (7%) Query 3 YIWISYALFEELQAKDMDRCRSVYEKALEVV-----PHKLFSFAKLWTLFVAFEIRQLN- 56 ++WI Y F L D+++ RS+ E+AL + KL +W + E N Sbjct 1648 FVWIKYMAFM-LSLADIEKARSIAERALRTINIREEEEKL----NIWVAYFNLENEHGNP 1702 Query 57 -LERARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMI 115 E +K+F A C +K++ A + R ++ + I+ + + K W++ I Sbjct 1703 PEESVKKVFERARQYCDPKKVYLALLGVYERTEQYKLADKLLDEMIKKFKQSCKIWLRKI 1762 Query 116 ELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLL 171 + + E + + + + + + I + I +E G DR R+L+E +L Sbjct 1763 QSSLKQNEEAIQSVVNRALLCLPRHKHIKFISQTAI-LEFKCGVADRGRSLFEGVL 1817 Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 4/114 (3%) Query 27 EKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQ---L 83 +K L+ + K K+W + ++Q N E + + A+ + K + +Q L Sbjct 1741 DKLLDEMIKKFKQSCKIWLRKIQSSLKQ-NEEAIQSVVNRALLCLPRHKHIKFISQTAIL 1799 Query 84 ELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAVSM 137 E + G DR R + + YP W ++ E+ E + R++ E A+S+ Sbjct 1800 EFKCGVADRGRSLFEGVLREYPKRTDLWSVYLDQEIRLGEDDVIRSLFERAISL 1853 Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%) Query 99 KFIETYPLNPKAWIQMIELEVLAEETERARAICEIA---VSMEQMEMPELIWKAYIDMEV 155 K + + P + WI+ + + + E+AR+I E A +++ + E IW AY ++E Sbjct 1638 KLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEEEKLNIWVAYFNLEN 1697 Query 156 NWG--ALDRARALYER 169 G + + ++ER Sbjct 1698 EHGNPPEESVKKVFER 1713 > dre:387600 xab2, MGC198247, zgc:63498, zgc:63949; XPA binding protein 2; K12867 pre-mRNA-splicing factor SYF1 Length=851 Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 28/193 (14%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W+S+A F E + +D R+++EKA +V ++ A +W + E+R N ++A +I Sbjct 392 LWVSFAKFYE-DNEQIDDARTIFEKATKVNYKQVDDLAAVWCEYGEMELRHENYDQALRI 450 Query 64 FGAAIGKCGKE------------------KIFQAYAQLELRLGNIDRCRQIHAKFIETYP 105 A ++ K++ A LE LG + ++ + I+ Sbjct 451 LRKATAIPARKAEYFDSSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRIIDLRI 510 Query 106 LNPKAWIQ---MIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVN-WGA-- 159 P+ I +E EE+ +A E +++ + IW Y+ ++ +G Sbjct 511 ATPQIIINYAMFLEEHNYFEESFKA---YERGIALFKWPNVHDIWNTYLTKFIDRYGGKK 567 Query 160 LDRARALYERLLD 172 L+RAR L+E+ LD Sbjct 568 LERARDLFEQALD 580 Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 11/171 (6%) Query 4 IWISY--ALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLER-A 60 IW +Y + K ++R R ++E+AL+ P K +AK L A + L R A Sbjct 551 IWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAK---YAKTIYLLYAKLEEEYGLARHA 607 Query 61 RKIF---GAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNP--KAWIQMI 115 ++ AA+ + ++F Y + + + R I+ K IE P ++ Sbjct 608 MAVYERATAAVEAEERHQMFNIYIKRAAEIYGVTHTRAIYQKAIEVLPDEHARDMCLRFA 667 Query 116 ELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARAL 166 ++E E +RARAI + + W+ + + E+ G D R + Sbjct 668 DMESKLGEIDRARAIYSYCSQICDPRVTAHFWQTWKEFEIRHGNEDTIREM 718 > xla:779090 pdcd11, alg-4, alg4, nfbp, rrp5; programmed cell death 11; K14792 rRNA biogenesis protein RRP5 Length=1812 Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 8/135 (5%) Query 43 LWTLFVAFEIRQLNLERARKIFGAAIGKCGKEK----IFQAYAQLELRLGNIDRCRQIHA 98 +W F F ++Q + K+ A+ K EK + +AQLE +LG+ +R + + Sbjct 1668 VWIKFATFLLKQGQGDGTHKLLQRAL-KSLPEKDHVDVISKFAQLEFQLGDTERAKALFE 1726 Query 99 KFIETYPLNPKAWIQMIELEVLAEETERARAICE--IAVSMEQMEMPELIWKAYIDMEVN 156 + +YP W I++ V + R I E I +S+ ++ + +K Y++ E Sbjct 1727 STLSSYPKRTDLWSVYIDMMVKHGSQKEVRDIFERVIHLSLAAKKI-KFFFKRYLEYEKK 1785 Query 157 WGALDRARALYERLL 171 G+ + +A+ E+ L Sbjct 1786 HGSTESVQAVKEKAL 1800 Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 78/210 (37%), Gaps = 50/210 (23%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAK------LWTLFVAFEIRQLNL 57 +W+ Y F L A ++++ R V E+AL+ + SF + +W + E Sbjct 1562 LWLQYMAFH-LHATEIEKARVVAERALKTI-----SFREEQEKLNVWVALLNLENMYGTE 1615 Query 58 ERARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWI----- 112 E K F A+ K+FQ A + ++ + ++ ++ + WI Sbjct 1616 ESLTKAFERAVQYNEPLKVFQQLADIYIKSEKFKQAEDLYNTMLKRFRQEKSVWIKFATF 1675 Query 113 -------------------------------QMIELEVLAEETERARAICEIAVSMEQME 141 + +LE +TERA+A+ E +S Sbjct 1676 LLKQGQGDGTHKLLQRALKSLPEKDHVDVISKFAQLEFQLGDTERAKALFESTLSSYPKR 1735 Query 142 MPELIWKAYIDMEVNWGALDRARALYERLL 171 +W YIDM V G+ R ++ER++ Sbjct 1736 TD--LWSVYIDMMVKHGSQKEVRDIFERVI 1763 > hsa:22984 PDCD11, ALG-4, ALG4, KIAA0185, NFBP, RRP5; programmed cell death 11; K14792 rRNA biogenesis protein RRP5 Length=1871 Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 8/136 (5%) Query 43 LWTLFVAFEIRQLNLERARKIFGAAIGKCGKEK----IFQAYAQLELRLGNIDRCRQIHA 98 +W + AF +R+ + ++ A+ +C K + +AQLE +LG+ +R + I Sbjct 1727 VWIKYGAFLLRRSQAAASHRVLQRAL-ECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFE 1785 Query 99 KFIETYPLNPKAWIQMIELEVLAEETERARAICE--IAVSMEQMEMPELIWKAYIDMEVN 156 + TYP W I++ + + R I E I +S+ M + +K Y+D E Sbjct 1786 NTLSTYPKRTDVWSVYIDMTIKHGSQKDVRDIFERVIHLSLAPKRM-KFFFKRYLDYEKQ 1844 Query 157 WGALDRARALYERLLD 172 G +A+ + L+ Sbjct 1845 HGTEKDVQAVKAKALE 1860 Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 50/210 (23%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAK------LWTLFVAFEIRQLNL 57 +W+ Y F LQA ++++ R+V E+AL+ + SF + +W + E + Sbjct 1621 LWLQYMAFH-LQATEIEKARAVAERALKTI-----SFREEQEKLNVWVALLNLENMYGSQ 1674 Query 58 ERARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWI----- 112 E K+F A+ K+F A + + +++ + ++ + WI Sbjct 1675 ESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAF 1734 Query 113 -------------------------------QMIELEVLAEETERARAICEIAVSMEQME 141 + +LE + ERA+AI E +S Sbjct 1735 LLRRSQAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKR 1794 Query 142 MPELIWKAYIDMEVNWGALDRARALYERLL 171 +W YIDM + G+ R ++ER++ Sbjct 1795 TD--VWSVYIDMTIKHGSQKDVRDIFERVI 1822 Score = 35.8 bits (81), Expect = 0.073, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Query 99 KFIETYPLNPKAWIQMIELEVLAEETERARAICEIA---VSMEQMEMPELIWKAYIDMEV 155 + + + P + W+Q + + A E E+ARA+ E A +S + + +W A +++E Sbjct 1610 RLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLEN 1669 Query 156 NWGALDRARALYER 169 +G+ + ++ER Sbjct 1670 MYGSQESLTKVFER 1683 > mmu:18572 Pdcd11, 1110021I22Rik, ALG-4, Pdcd7, mKIAA0185; programmed cell death 11; K14792 rRNA biogenesis protein RRP5 Length=1862 Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 50/210 (23%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAK------LWTLFVAFEIRQLNL 57 +W+ Y F LQA ++++ R+V E+AL+ + SF + +W + E + Sbjct 1612 LWLQYMAFH-LQATEIEKARAVAERALKTI-----SFREEQEKLNVWVALLNLENMYGSQ 1665 Query 58 ERARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWI----- 112 E K+F A+ K+F A + + +++ + ++ + WI Sbjct 1666 ESLTKVFERAVQYNEPLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQEKAVWIKYGAF 1725 Query 113 -------------------------------QMIELEVLAEETERARAICEIAVSMEQME 141 + +LE + ERA+AI E +S Sbjct 1726 VLGRSQAGASHRVLQRALECLPAKEHVDVIVKFAQLEFQLGDVERAKAIFENTLSTYPKR 1785 Query 142 MPELIWKAYIDMEVNWGALDRARALYERLL 171 +W YIDM + G+ R ++ER++ Sbjct 1786 TD--VWSVYIDMTIKHGSQTAVRDIFERVI 1813 Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 11/156 (7%) Query 26 YEKALEVVPHKLFSFAK---LWTLFVAFEIRQLNLERARKIFGAAIGKCGKEK----IFQ 78 Y++A E+ L F + +W + AF + + + ++ A+ +C K + Sbjct 1698 YKEAGELYNRMLKRFRQEKAVWIKYGAFVLGRSQAGASHRVLQRAL-ECLPAKEHVDVIV 1756 Query 79 AYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICE--IAVS 136 +AQLE +LG+++R + I + TYP W I++ + R I E I +S Sbjct 1757 KFAQLEFQLGDVERAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQTAVRDIFERVIHLS 1816 Query 137 MEQMEMPELIWKAYIDMEVNWGALDRARALYERLLD 172 + M + +K Y+D E G +A+ + L+ Sbjct 1817 LAPKRM-KFFFKRYLDYEKQHGTEKDVQAVKAKALE 1851 Score = 36.2 bits (82), Expect = 0.070, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Query 99 KFIETYPLNPKAWIQMIELEVLAEETERARAICEIA---VSMEQMEMPELIWKAYIDMEV 155 + + + P + W+Q + + A E E+ARA+ E A +S + + +W A +++E Sbjct 1601 RLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLEN 1660 Query 156 NWGALDRARALYER 169 +G+ + ++ER Sbjct 1661 MYGSQESLTKVFER 1674 > tpv:TP04_0906 hypothetical protein Length=1137 Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 14/180 (7%) Query 2 IYIWISYALFEELQA---KDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLE 58 +YIW+SY F + D + R+++E +LEV+ +LW+ + FE ++L + Sbjct 101 VYIWLSYLRFVSGNSHTLSDFNHLRALFESSLEVLGLHALDGPQLWSEYRHFE-QELISK 159 Query 59 RARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIEL- 117 R +GA I K +F QLEL L + + + P + + + E Sbjct 160 LPRDQYGAQIDKV--RSLF--CRQLELPLAGLPDLLDEYLVWESELPSDYRKPTAVAEAA 215 Query 118 EVLAEETERARAICEIAVSMEQMEMPEL-----IWKAYIDMEVNWGALDRARALYERLLD 172 E R E+ + + EM +W YID E+ G + R Y R LD Sbjct 216 HKRGFEGWEQRKCFELKIQSDFHEMMSRDNMNSLWNEYIDFELKCGDMPRIMITYHRALD 275 > cel:C16A3.3 let-716; LEThal family member (let-716); K14792 rRNA biogenesis protein RRP5 Length=1743 Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 14/141 (9%) Query 42 KLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEK----IFQAYAQLELRLGNIDRCRQIH 97 ++WTL + Q + + AR++ A+ K + + +AQLE + G+ +R R + Sbjct 1594 EVWTLLAEHLMTQNDQKAARELLPRALKSAPKAQQHVQLISKFAQLEFKHGDAERGRTLL 1653 Query 98 AKFIETYPLNPKAWIQMIELEVLAEETERARAI----CEIAVSMEQMEMPELIWKAYIDM 153 + +P W+ E + E AR + C + S+ +M ++K +++M Sbjct 1654 EGLVTAHPKKTDLWLVYAEAVLKHLGIEHARKVLERACNLGFSIHKMRP---LYKKWLEM 1710 Query 154 EVNWG---ALDRARALYERLL 171 E G A++ +A E+ L Sbjct 1711 ESKHGDAAAVELVKAKAEKFL 1731 Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%) Query 90 IDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAV-SMEQMEMPEL--I 146 I++ + H++ + + P + WI+ + + + AR E A+ ++ E EL I Sbjct 1468 IEKSEEDHSRLVRSDPNSAINWIEYMSHFIEKSDLAAARKTAEEALGAINPTESDELLKI 1527 Query 147 WKAYIDMEVNWGALDRARALYER 169 W AY++MEV +G + ++ER Sbjct 1528 WTAYLNMEVAYGDAATVQKVFER 1550 Score = 35.4 bits (80), Expect = 0.093, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 73/171 (42%), Gaps = 6/171 (3%) Query 5 WISYALFEELQAKDMDRCRSVYEKALEVV-PHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 WI Y + ++ D+ R E+AL + P + K+WT ++ E+ + +K+ Sbjct 1489 WIEY-MSHFIEKSDLAAARKTAEEALGAINPTESDELLKIWTAYLNMEVAYGDAATVQKV 1547 Query 64 FGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNP-KAWIQMIELEVLAE 122 F A + + +++ + QI + ++ + N + W + E + Sbjct 1548 FERACKNANAYTVHKTLSKIYQKFEKNAEATQILEQMVKKFRANQLEVWTLLAEHLMTQN 1607 Query 123 ETERARAICEIAV--SMEQMEMPELIWKAYIDMEVNWGALDRARALYERLL 171 + + AR + A+ + + + +LI K + +E G +R R L E L+ Sbjct 1608 DQKAARELLPRALKSAPKAQQHVQLISK-FAQLEFKHGDAERGRTLLEGLV 1657 > bbo:BBOV_III009870 17.m07855; hypothetical protein Length=950 Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 38/190 (20%) Query 4 IWISYALFEELQAK---DMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLN---- 56 +WI+Y FE +A ++ R R+++E+ L+ V LW+ + FE L+ Sbjct 104 LWIAYTRFERRRASADANIGRIRTLFERGLKSVGLHALDGPLLWSEYRTFEQELLDTYKN 163 Query 57 ------LERARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKA 110 +ER R +F + QLEL L + + + P + Sbjct 164 ADYGNQVERIRSLF---------------FRQLELPLSGLADLLDEYRVWESELPKEHRK 208 Query 111 WIQMIELEVLAE---ETERARAICEIAVSMEQMEM-----PELIWKAYIDMEVNWGALDR 162 +IE E++ + + +R E+ V E EM +W Y++ E+ G DR Sbjct 209 --PVIEGEIIHKHGFDAWESRKCFELKVQSEFDEMLNPGKMNTLWNDYLNFELKGGDTDR 266 Query 163 ARALYERLLD 172 +Y R LD Sbjct 267 ITIVYMRALD 276 > hsa:653889 pre-mRNA-processing factor 6-like Length=406 Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 6/154 (3%) Query 16 AKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEK 75 A D+ RS+ A + P+ ++W V E ERAR++ A + Sbjct 86 AGDVPAARSILALAFQANPNS----EEIWLAAVKLESENDEYERARRLLAKARSSAPTAR 141 Query 76 IFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAV 135 +F +LE NI + + + + Y PK W+ ++E E E+AR + Sbjct 142 VFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGL 201 Query 136 SMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 P +W +E G L RARA+ E+ Sbjct 202 KKCPHSTP--LWLLLSRLEEKIGQLTRARAILEK 233 Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 3/117 (2%) Query 40 FAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEK-IFQAYAQLELRLGNIDRCRQIHA 98 F KLW + E ++ +E+AR+ + + KC ++ ++LE ++G + R R I Sbjct 173 FPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILE 232 Query 99 KFIETYPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEV 155 K P NP W++ + LE A A + +A ++++ ++W I +E Sbjct 233 KSRLKNPKNPGLWLESVRLEYRAGLKNIANTL--MAKALQECPNSGILWSEAIFLEA 287 > dre:368864 prpf39, fa10d07, si:dz261o22.3, wu:fa10d07; PRP39 pre-mRNA processing factor 39 homolog (yeast); K13217 pre-mRNA-processing factor 39 Length=752 Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 7/102 (6%) Query 77 FQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAVS 136 ++ YA +E + G I +++ + ++ PL+ W+ I ++T A I S Sbjct 203 WKKYADIERKHGYIQMADEVYRRGLQAIPLSVDLWLHYITFLRENQDTSDGEAESRIRAS 262 Query 137 MEQMEMP-------ELIWKAYIDMEVNWGALDRARALYERLL 171 E + + +W+AYI E G L A+Y+RLL Sbjct 263 YEHAVLACGTDFRSDRLWEAYIAWETEQGKLANVTAIYDRLL 304 > hsa:24148 PRPF6, ANT-1, C20orf14, Prp6, TOM, U5-102K, hPrp6; PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae); K12855 pre-mRNA-processing factor 6 Length=941 Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query 39 SFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKE-KIFQAYAQLELRLGNIDRCRQIH 97 F KLW + E ++ +E+AR+ + + KC ++ ++LE ++G + R R I Sbjct 707 DFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAIL 766 Query 98 AKFIETYPLNPKAWIQMIELEVLA 121 K P NP W++ + LE A Sbjct 767 EKSRLKNPKNPGLWLESVRLEYRA 790 Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 6/154 (3%) Query 16 AKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEK 75 A D+ RS+ A + P+ ++W V E ERAR++ A + Sbjct 621 AGDVPAARSILALAFQANPNS----EEIWLAAVKLESENDEYERARRLLAKARSSAPTAR 676 Query 76 IFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAV 135 +F +LE NI + + + + Y PK W+ ++E E E+AR + Sbjct 677 VFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGL 736 Query 136 SMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 P +W +E G L RARA+ E+ Sbjct 737 KKCPHSTP--LWLLLSRLEEKIGQLTRARAILEK 768 > ath:AT3G17040 HCF107; HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107); binding Length=652 Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 6/149 (4%) Query 22 CRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKE-KIFQAY 80 R +YEK + + + +W + E R N+ RAR++F AA K + + Sbjct 221 ARILYEKGCQSTQGE---NSYIWQCWAVLENRLGNVRRARELFDAATVADKKHVAAWHGW 277 Query 81 AQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQM 140 A LE++ GNI + R + AK ++ N + + LE A E+AR + + A Sbjct 278 ANLEIKQGNISKARNLLAKGLKFCGRNEYIYQTLALLEAKAGRYEQARYLFKQATICNSR 337 Query 141 EMPELIWKAYIDMEVNWGALDRARALYER 169 W A+ +E+ AR L+E+ Sbjct 338 SCAS--WLAWAQLEIQQERYPAARKLFEK 364 Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 42/202 (20%) Query 3 YIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARK 62 YIW +A+ E + ++ R R +++ A V K A W + EI+Q N+ +AR Sbjct 238 YIWQCWAVLEN-RLGNVRRARELFDAA--TVADKKHVAA--WHGWANLEIKQGNISKARN 292 Query 63 IFGAAIGKCGK-EKIFQAYAQLELRLG---------------NIDRC------------- 93 + + CG+ E I+Q A LE + G N C Sbjct 293 LLAKGLKFCGRNEYIYQTLALLEAKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQ 352 Query 94 ------RQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPELIW 147 R++ K ++ P N AW E ER R + +I ++ + P L+ Sbjct 353 ERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLLKIGHALNPRD-PVLLQ 411 Query 148 KAYIDMEVNWGALDRARALYER 169 + +E + + ARAL R Sbjct 412 SLGL-LEYKHSSANLARALLRR 432 Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust. Identities = 35/169 (20%), Positives = 69/169 (40%), Gaps = 15/169 (8%) Query 13 ELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAI---- 68 E + + R++ +A E+ P +W + E ++ N AR+++ A+ Sbjct 417 EYKHSSANLARALLRRASELDPR----HQPVWIAWGWMEWKEGNTTTARELYQRALSIDA 472 Query 69 GKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERAR 128 + QA+ LE R GN+ R++ + + W+ +LE +TERA Sbjct 473 NTESASRCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTWMTWAQLEEDQGDTERAE 532 Query 129 AICEIAVSMEQMEMPELIW-KAYIDMEVNWGALDRARALYERLLDKTQH 176 I + + + W ++D+ +D A +RLL+ Q+ Sbjct 533 EIRNLYFQQRTEVVDDASWVTGFLDI------IDPALDTVKRLLNFGQN 575 > sce:YBR055C PRP6, RNA6, TSM7269; Prp6p; K12855 pre-mRNA-processing factor 6 Length=899 Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 6/126 (4%) Query 18 DMDRCRSVYEKALEVVPHKLFSFAKLW-TLFVAFEIRQLNLERARKIFGAAIGKCGKEKI 76 +++ R Y +VP+ LW +L EI N RAR I + K + + Sbjct 683 NIEMSRETYLSGTRLVPNCPL----LWVSLSKIDEIDLKNPVRARSILDRGLLKNPDDVL 738 Query 77 FQ-AYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAV 135 F A Q+E+RLGN+D+ + + ++ +P N W++ I+L ++ + I + A+ Sbjct 739 FYIAKIQMEIRLGNLDQAELLVTQALQKFPSNALLWVEQIKLFKHGNKSSLKKTIFQDAL 798 Query 136 SMEQME 141 Q + Sbjct 799 RRTQND 804 Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 7/102 (6%) Query 75 KIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIEL-EVLAEETERARAICEI 133 K F Q+ +GNI+ R+ + P P W+ + ++ E+ + RAR+I + Sbjct 669 KFFLQLGQIYHSMGNIEMSRETYLSGTRLVPNCPLLWVSLSKIDEIDLKNPVRARSILDR 728 Query 134 AVSMEQMEMPE--LIWKAYIDMEVNWGALDRARALYERLLDK 173 + ++ P+ L + A I ME+ G LD+A L + L K Sbjct 729 GL----LKNPDDVLFYIAKIQMEIRLGNLDQAELLVTQALQK 766 > dre:794079 pdcd11, MGC162501, cb680, im:7148359, sb:cb680, wu:fc68c10; programmed cell death 11; K14792 rRNA biogenesis protein RRP5 Length=1816 Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 76/160 (47%), Gaps = 3/160 (1%) Query 14 LQAKDMDRCRSVYEKALEVVPHKLFSFA-KLWTLFVAFEIRQLNLERARKIFGAAIGKCG 72 LQA +++ R+V E+AL+ + + +W + E + +K+F AI C Sbjct 1575 LQATQIEQARAVAERALKTISFREEQEKLNIWVAMLNLENMYGTPDSLQKVFERAIQYCE 1634 Query 73 KEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICE 132 ++Q A + + I ++ ++ + + ++ + +++ A A+ + Sbjct 1635 PLLVYQQLADIYAKSEKIKEAESLYKSMVKRFRQDKAVYLSYGTFLLRQRQSDAANALLQ 1694 Query 133 IAV-SMEQMEMPELIWKAYIDMEVNWGALDRARALYERLL 171 A+ S+ E +LI + + +E +G ++A+++++++L Sbjct 1695 RALQSLSSKEHVDLIAR-FARLEFQFGNSEKAKSMFDKVL 1733 Score = 35.8 bits (81), Expect = 0.079, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 62/137 (45%), Gaps = 10/137 (7%) Query 50 FEIRQLNLERARKIFGAAIGKCGKEK---IFQAYAQLELRLGNIDRCRQIHAKFIETYPL 106 F +RQ + A + A+ ++ + +A+LE + GN ++ + + K + TYP Sbjct 1679 FLLRQRQSDAANALLQRALQSLSSKEHVDLIARFARLEFQFGNSEKAKSMFDKVLTTYPK 1738 Query 107 NPKAWIQMIELEVLAEETERARA----ICEIAVSMEQMEMPELIWKAYIDMEVNWGALDR 162 W I+L V + R + ++VS++++ + +K Y++ E G + Sbjct 1739 RTDLWSVFIDLMVKHGSQKEVRELFDRVIHLSVSVKKI---KFFFKRYLEYEKKNGTPET 1795 Query 163 ARALYERLLDKTQHVNA 179 + + ++ L+ + A Sbjct 1796 IQVVKQKALEYVESKGA 1812 Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Query 113 QMIELEVLAEETERARAICEIA---VSMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 Q + + A + E+ARA+ E A +S + + IW A +++E +G D + ++ER Sbjct 1569 QYMAFHLQATQIEQARAVAERALKTISFREEQEKLNIWVAMLNLENMYGTPDSLQKVFER 1628 Query 170 LL 171 + Sbjct 1629 AI 1630 > mmu:67439 Xab2, 0610041O14Rik, AV025587; XPA binding protein 2; K12867 pre-mRNA-splicing factor SYF1 Length=855 Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 15/174 (8%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLN---LERA 60 I I+YA+F E + K + YE+ + + K + + +W+ ++ I + LERA Sbjct 520 IVINYAMFLE-EHKYFEESFKAYERGISLF--KWPNVSDIWSTYLTKFISRYGGRKLERA 576 Query 61 RKIFGAAIGKCGKE---KIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIEL 117 R +F A+ C + ++ YAQLE G ++ + T + P M + Sbjct 577 RDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYDR--ATRAVEPAQQYDMFNI 634 Query 118 EV--LAE--ETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALY 167 + AE R I + A+ + E + + DME G +DRARA+Y Sbjct 635 YIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIY 688 Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 28/193 (14%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W+++A F E + +D R + EKA +V ++ A +W E+R N + A K+ Sbjct 397 LWVAFAKFYEDNGQ-LDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALKL 455 Query 64 FGAAIGKCGKE------------------KIFQAYAQLELRLGNIDRCRQIHAKFIETYP 105 A + K++ A LE LG + ++ + ++ Sbjct 456 LRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRI 515 Query 106 LNPKAWIQ---MIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVN-WGA-- 159 P+ I +E EE+ +A E +S+ + IW Y+ ++ +G Sbjct 516 ATPQIVINYAMFLEEHKYFEESFKA---YERGISLFKWPNVSDIWSTYLTKFISRYGGRK 572 Query 160 LDRARALYERLLD 172 L+RAR L+E+ LD Sbjct 573 LERARDLFEQALD 585 Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 11/171 (6%) Query 4 IWISY--ALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAK-LWTLFVAFEIRQLNLERA 60 IW +Y + ++R R ++E+AL+ P K +AK L+ L+ E A Sbjct 556 IWSTYLTKFISRYGGRKLERARDLFEQALDGCPPK---YAKTLYLLYAQLEEEWGLARHA 612 Query 61 RKIFGAA---IGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNP--KAWIQMI 115 ++ A + + +F Y + + + R I+ K IE + ++ Sbjct 613 MAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFA 672 Query 116 ELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARAL 166 ++E E +RARAI + W+ + D EV G D R + Sbjct 673 DMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREM 723 > mmu:328110 Prpf39, FLJ11128, MGC37077, Srcs1; PRP39 pre-mRNA processing factor 39 homolog (yeast); K13217 pre-mRNA-processing factor 39 Length=665 Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 7/101 (6%) Query 78 QAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIE-----LEVLAEETERA-RAIC 131 + YA LE R NI + +++ + ++ PL+ WI I L+ +ET R Sbjct 131 KKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDQETNTTIRGTF 190 Query 132 EIAVSMEQMEM-PELIWKAYIDMEVNWGALDRARALYERLL 171 E AV + + +W+ YI+ E G L A+Y+R+L Sbjct 191 EHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRIL 231 > tpv:TP01_0797 hypothetical protein; K12855 pre-mRNA-processing factor 6 Length=1032 Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 0/120 (0%) Query 58 ERARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIEL 117 +RARK+ A +C K++ QLE +L N ++ ++ K +E +P K W+ +L Sbjct 664 DRARKLLEKARTRCNTPKVWMKSVQLERQLKNYEKALELVDKALEIHPYFDKLWMISGQL 723 Query 118 EVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQHV 177 ++ + A +E +W I++++ +ARAL E +K + + Sbjct 724 KLEKHPKDVEGATLTYKQGVETCPWSVNLWLLSIELQIELKEFAKARALVETAKNKIRTI 783 > hsa:56949 XAB2, DKFZp762C1015, HCNP, HCRN, NTC90, SYF1; XPA binding protein 2; K12867 pre-mRNA-splicing factor SYF1 Length=855 Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 15/174 (8%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLN---LERA 60 I I+YA+F E + K + YE+ + + K + + +W+ ++ I + LERA Sbjct 520 IVINYAMFLE-EHKYFEESFKAYERGISLF--KWPNVSDIWSTYLTKFIARYGGRKLERA 576 Query 61 RKIFGAAIGKCGKE---KIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIEL 117 R +F A+ C + ++ YAQLE G ++ + T + P M + Sbjct 577 RDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYER--ATRAVEPAQQYDMFNI 634 Query 118 EV--LAE--ETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALY 167 + AE R I + A+ + E + + DME G +DRARA+Y Sbjct 635 YIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIY 688 Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 28/193 (14%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W+++A F E + +D R + EKA +V ++ A +W E+R N + A ++ Sbjct 397 LWVAFAKFYEDNGQ-LDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRL 455 Query 64 FGAAIGKCGKE------------------KIFQAYAQLELRLGNIDRCRQIHAKFIETYP 105 A + K++ A LE LG + ++ + ++ Sbjct 456 LRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRI 515 Query 106 LNPKAWIQ---MIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEV-NWGA-- 159 P+ I +E EE+ +A E +S+ + IW Y+ + +G Sbjct 516 ATPQIVINYAMFLEEHKYFEESFKA---YERGISLFKWPNVSDIWSTYLTKFIARYGGRK 572 Query 160 LDRARALYERLLD 172 L+RAR L+E+ LD Sbjct 573 LERARDLFEQALD 585 Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 66/166 (39%), Gaps = 11/166 (6%) Query 4 IWISY--ALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAK-LWTLFVAFEIRQLNLERA 60 IW +Y + ++R R ++E+AL+ P K +AK L+ L+ E A Sbjct 556 IWSTYLTKFIARYGGRKLERARDLFEQALDGCPPK---YAKTLYLLYAQLEEEWGLARHA 612 Query 61 RKIF---GAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNP--KAWIQMI 115 ++ A+ + +F Y + + + R I+ K IE + ++ Sbjct 613 MAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFA 672 Query 116 ELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALD 161 ++E E +RARAI + W+ + D EV G D Sbjct 673 DMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNED 718 > dre:100334796 Pre-mRNA-processing factor 39-like Length=707 Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 8/111 (7%) Query 77 FQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEV------LAEETERARAI 130 ++ +A LE R G+ ++ ++ + +++ PL+ WI I L + L E T R R++ Sbjct 119 WKKFADLERRAGHNEKAEEVCEQGLKSIPLSVDLWIHYINLLLGTLNMNLPESTRRIRSV 178 Query 131 CEIAVSMEQMEM-PELIWKAYIDMEVNWGALDRARALYERLLD-KTQHVNA 179 E AVS + + +W Y + E L +Y+R+L T+H N Sbjct 179 FEEAVSAAGWDFHSDRLWDLYAEWEKEQNNLTFMTRIYDRVLSVPTRHYNT 229 Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query 88 GNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPELIW 147 G++ RQ F+ YPL W + +LE A E+A +CE ++ + + +W Sbjct 96 GHMRASRQALNAFLLRYPLCYGYWKKFADLERRAGHNEKAEEVCEQG--LKSIPLSVDLW 153 Query 148 KAYIDM 153 YI++ Sbjct 154 IHYINL 159 > hsa:55015 PRPF39, FLJ11128, FLJ20666, FLJ45460, MGC149842, MGC149843; PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae); K13217 pre-mRNA-processing factor 39 Length=669 Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 7/101 (6%) Query 78 QAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIEL--EVL----AEETERARAIC 131 + YA LE R NI +++ + ++ PL+ WI I E L E R Sbjct 133 KKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPETNNTIRGTF 192 Query 132 EIAVSMEQMEM-PELIWKAYIDMEVNWGALDRARALYERLL 171 E AV + + +W+ YI+ E G L A+Y+R+L Sbjct 193 EHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRIL 233 > cpv:cgd5_920 Pre-mRNA splicing factor Pro1/Prp6. HAT repeat protein ; K12855 pre-mRNA-processing factor 6 Length=923 Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 8/118 (6%) Query 3 YIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARK 62 Y WI +A FEE + + ++ V +K+L+ P K LW + N E AR Sbjct 538 YFWIKWANFEE-KYGNFEKVDHVLQKSLKNCPDKQI----LWLKAAQNQSANGNAEIARL 592 Query 63 IF--GAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELE 118 I G + KE+I A+LEL G I+R + I + P + + W++ I+LE Sbjct 593 ILSKGYSSSLNDKEEIVLEAARLELSQGEIERAKIILERERTNSP-SVQIWVESIKLE 649 Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 2/119 (1%) Query 52 IRQLNLERARKIFGAAIGKC-GKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKA 110 I+ N+ AR +F ++ KE + +A E + GN ++ + K ++ P Sbjct 514 IKSNNIISARAMFESSADMFKSKEYFWIKWANFEEKYGNFEKVDHVLQKSLKNCPDKQIL 573 Query 111 WIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 W++ + + E AR I S + E++ +A +E++ G ++RA+ + ER Sbjct 574 WLKAAQNQSANGNAEIARLILSKGYSSSLNDKEEIVLEA-ARLELSQGEIERAKIILER 631 > ath:AT5G28740 transcription-coupled DNA repair protein-related; K12867 pre-mRNA-splicing factor SYF1 Length=917 Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 22/179 (12%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVV--PHKLFSFAKLWTLFVAFEIR---QLNLE 58 I ++YA E + K + VYE+ +++ PH +W ++ ++ + LE Sbjct 551 IIMNYAFLLE-ENKYFEDAFKVYERGVKIFKYPH----VKDIWVTYLTKFVKRYGKTKLE 605 Query 59 RARKIFGAAIGKCGKEKI---FQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMI 115 RAR++F A+ + + + YA+LE G R +++ + + P K + I Sbjct 606 RARELFEHAVSMAPSDAVRTLYLQYAKLEEDYGLAKRAMKVYEEATKKVPEGQKLEMYEI 665 Query 116 ELEVLAE--ETERARAICEIAVSMEQMEMP----ELIWKAYIDMEVNWGALDRARALYE 168 + AE R R I E A+ + +P +++ + ++E + G +DRARALY+ Sbjct 666 YISRAAEIFGVPRTREIYEQAI---ESGLPHKDVKIMCIKFAELERSLGEIDRARALYK 721 Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust. Identities = 46/230 (20%), Positives = 84/230 (36%), Gaps = 61/230 (26%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W+++A E KD+ R +++KA++V + A +W + E+R N + A ++ Sbjct 425 LWVAFAKLYE-NHKDLVNTRVIFDKAVQVNYKTVDHLASVWCEWAEMELRHKNFKGALEL 483 Query 64 FGAA-----------IGKCGKE----------KIFQAYAQLELRLGNIDRCRQIHAKFIE 102 A + G E +++ Y LE LG ++ R ++ K ++ Sbjct 484 MRRATAVPTVEVRRRVAADGNEPVQMKLHRSLRLWSFYVDLEESLGTLESTRAVYEKILD 543 Query 103 ------------------------------------TYPLNPKAWIQMIELEVL---AEE 123 YP W+ + V + Sbjct 544 LRIATPQIIMNYAFLLEENKYFEDAFKVYERGVKIFKYPHVKDIWVTYLTKFVKRYGKTK 603 Query 124 TERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDK 173 ERAR + E AVSM + ++ Y +E ++G RA +YE K Sbjct 604 LERARELFEHAVSMAPSDAVRTLYLQYAKLEEDYGLAKRAMKVYEEATKK 653 Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 10/171 (5%) Query 4 IWISY--ALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 IW++Y + ++R R ++E A+ + P + L+ + E +RA Sbjct 587 IWVTYLTKFVKRYGKTKLERARELFEHAVSMAPSD--AVRTLYLQYAKLEEDYGLAKRAM 644 Query 62 KIFGAAIGKCG---KEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMI--- 115 K++ A K K ++++ Y + + R R+I+ + IE+ + I I Sbjct 645 KVYEEATKKVPEGQKLEMYEIYISRAAEIFGVPRTREIYEQAIESGLPHKDVKIMCIKFA 704 Query 116 ELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARAL 166 ELE E +RARA+ + + W + + EV G D R + Sbjct 705 ELERSLGEIDRARALYKYSSQFADPRSDPEFWNKWHEFEVQHGNEDTYREM 755 > pfa:PF11_0108 U5 snRNP-associated protein, putative; K12855 pre-mRNA-processing factor 6 Length=1329 Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 7/137 (5%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W++ A E K D V +A++ PH + LW + + +++AR+I Sbjct 692 LWLALANLELTHGKRED-VDEVLHRAVQSCPHS----SVLWLMLAKQKWLNNEIDKAREI 746 Query 64 FGAA-IGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAE 122 + I E+I A +LE DR R + K PK W+Q ++LE L Sbjct 747 LAESFIHNQNTEEISLAAIKLERENNEFDRARFLLKK-SRVQCNTPKIWMQSVQLERLLR 805 Query 123 ETERARAICEIAVSMEQ 139 + A+ + A+ + + Sbjct 806 NYKEAKMLAHEALKIHK 822 Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 7/167 (4%) Query 5 WISYALFEEL-QAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 WI +A EE Q+K C S+ + + L + +++ I ++ AR + Sbjct 622 WIKFA--EECEQSKFTHTCESIIRNTMHIGVETL-NKKRIYKQDAQNCIHNKSIHTARTL 678 Query 64 FGAAIGKCG-KEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAE 122 + A+ K+ ++ A A LEL G + ++ + +++ P + W+ + + + L Sbjct 679 YNEALKIFKTKKSLWLALANLELTHGKREDVDEVLHRAVQSCPHSSVLWLMLAKQKWLNN 738 Query 123 ETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 E ++AR I +A S + E I A I +E DRAR L ++ Sbjct 739 EIDKAREI--LAESFIHNQNTEEISLAAIKLERENNEFDRARFLLKK 783 > bbo:BBOV_IV000660 21.m02991; XBA-binding protein 2; K12867 pre-mRNA-splicing factor SYF1 Length=796 Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust. Identities = 36/179 (20%), Positives = 72/179 (40%), Gaps = 44/179 (24%) Query 2 IYIWISYALFEELQAKDMDRCRSVYEKALEVV-PHKLFS-FAKLWTLFVAFEIRQLNLER 59 +Y W+ Y +L D+++ + ++E+A+ V P K +LWT + ++ ++++ Sbjct 400 VYNWLHYV---KLVENDINKTQEIFEQAVATVDPRKSVGRVTELWTSYASYFENHVDVDA 456 Query 60 ARKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEV 119 A +IF A+ GN KF++ W +E+ + Sbjct 457 ADRIFEKAVE------------------GNY--------KFVDDLA---SVWCAWVEMHI 487 Query 120 LAEETERARAICEIAVSMEQMEMPELI----------WKAYIDMEVNWGALDRARALYE 168 +RA + AV + + P + W +D+E N G + ARA ++ Sbjct 488 RHNNLKRALELSRQAVDVRNKKEPNYVEQRLYRSVKLWSLCLDLEQNLGTIATARATFD 546 Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 25/183 (13%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVV--PHKLFSFAKLWTLFVAFEIRQLNLERAR 61 I +++A++ E + K + S +EK + + P + + T FV R LER R Sbjct 558 IALNFAMYLE-EHKYFEAAFSAFEKCVALFKWPQLYYLYLPYLTKFVK-RYRGTKLERTR 615 Query 62 KIFGAAIGKCGKEK------------IFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPK 109 +IF + G+E ++ YA +E G + RC I + + Sbjct 616 EIFDQCLHS-GRESSTGDVPAQYVKYLYFLYAHMEEEFGLVRRCLGILKDAAKCAAKEDQ 674 Query 110 AWIQMIELEVLAEETE-----RARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRAR 164 + MI+L +A+ E + R I + + E+ + + YI ME G +DRAR Sbjct 675 --MTMIKL-YIAKTAEFYGIVQTRNIYQECLEFVDDEIARELCEMYIQMERGLGEIDRAR 731 Query 165 ALY 167 A++ Sbjct 732 AIF 734 > xla:100036801 xab2; XPA binding protein 2; K12867 pre-mRNA-splicing factor SYF1 Length=838 Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 11/172 (6%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLN---LERA 60 I I+YA+F E + + YE+ + + + + +W+ +++ I + LERA Sbjct 511 IVINYAMFLE-EHNYFEESFKAYERGIALF--RWPNVYDIWSTYLSKFIARYGGKKLERA 567 Query 61 RKIFGAAIGKCGKE---KIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIEL 117 R +F ++ C ++ IF YA+LE G ++ + + + + I + Sbjct 568 RDLFEQSLDGCPRKFAKNIFLLYAKLEEEHGLARHAMALYERATQAVETGEQYEMFNIYI 627 Query 118 EVLAE--ETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALY 167 + AE R I E A+ + E + + DME G +DRARA+Y Sbjct 628 KRAAEIYGVTHTRTIYERAIELLPDEQSREMCLRFADMECKLGEIDRARAIY 679 Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 28/193 (14%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKI 63 +W+S+A F E + ++ R++ ++A V + A +W F E+R N + A KI Sbjct 388 LWVSFAKFYEENGQ-IEDARAILQRATLVQYTHVDDLASVWCQFGEMELRHENYDAALKI 446 Query 64 FGAAIGKCGKE------------------KIFQAYAQLELRLGNIDRCRQIHAKFIETYP 105 A ++ +++ A LE LG + ++ + I+ + Sbjct 447 LRKATAVPARKAEYFDSSEPVQNRLYKSLRVWSMLADLEESLGTFKSTKAVYDRIIDLHI 506 Query 106 LNPKAWIQ---MIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEV-NWGA-- 159 P+ I +E EE+ +A E +++ + IW Y+ + +G Sbjct 507 ATPQIVINYAMFLEEHNYFEESFKA---YERGIALFRWPNVYDIWSTYLSKFIARYGGKK 563 Query 160 LDRARALYERLLD 172 L+RAR L+E+ LD Sbjct 564 LERARDLFEQSLD 576 Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust. Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 11/171 (6%) Query 4 IWISY--ALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAK-LWTLFVAFEIRQLNLERA 60 IW +Y K ++R R ++E++L+ P K FAK ++ L+ E A Sbjct 547 IWSTYLSKFIARYGGKKLERARDLFEQSLDGCPRK---FAKNIFLLYAKLEEEHGLARHA 603 Query 61 RKIF---GAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYP--LNPKAWIQMI 115 ++ A+ + ++F Y + + + R I+ + IE P + + ++ Sbjct 604 MALYERATQAVETGEQYEMFNIYIKRAAEIYGVTHTRTIYERAIELLPDEQSREMCLRFA 663 Query 116 ELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARAL 166 ++E E +RARAI + + W+ + D EV G D R + Sbjct 664 DMECKLGEIDRARAIYSYCSQICDPRLTAGFWQTWRDFEVRHGNEDTLREM 714 > pfa:PFL1735c RNA-processing protein, putative; K12867 pre-mRNA-splicing factor SYF1 Length=1031 Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 68/171 (39%), Gaps = 24/171 (14%) Query 15 QAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAF------EIRQLNLERARKIFGAAI 68 + K + VYEKAL V F + ++ ++V + + N+ R +F AI Sbjct 772 EKKYFNESFKVYEKALSV-----FHYPYVYPIYVNYINKYIQRYKDKNISYVRDLFKQAI 826 Query 69 -GKCGK--------EKIFQAYAQLELRLGNIDRCRQIHAK---FIETYPLNPKAWIQMIE 116 G K + IF YA E G I + I+ + F+E P K + I Sbjct 827 YGNDNKTFIPKEFAKHIFLMYANFESNYGFIKKELSIYKEAIPFLEE-PDKIKFYKIFIS 885 Query 117 LEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALY 167 A ++AR E A+ + + YIDME +R RALY Sbjct 886 KVSRAYGIQKAREAFEEAIQTLSDDSARQLCMIYIDMEYKLNEYERVRALY 936 > bbo:BBOV_IV009720 23.m06014; u5 snRNP-associated subunit, putaitve; K12855 pre-mRNA-processing factor 6 Length=1040 Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 8/125 (6%) Query 48 VAFEIRQLNLERARKIFGAAIGKCGKEKIFQAYAQLELRLGN----IDRCRQIHAKFIET 103 V E ERAR + + +CG KI+ QLE +LGN ID C Q +E Sbjct 658 VKLEREHDEFERARALLERSRKQCGTRKIWMQSIQLERQLGNYSVAIDLCDQA----LEI 713 Query 104 YPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRA 163 +P K W+ +L + E + A AI +Q +W ++ V +A Sbjct 714 HPYFDKLWMIAGQLRLELPEPDVATAINIFKDGADQCPWSVGLWLLALESLVRDNEHAKA 773 Query 164 RALYE 168 RAL + Sbjct 774 RALVD 778 Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 3/111 (2%) Query 60 ARKIFGAAIGKC-GKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELE 118 AR I+ +A+ + K+ ++ A A+LE R G + + ++ + P + W+ + + Sbjct 568 ARAIYRSALEQMKTKKSLWLALAELETRHGKPEDVDDVLSQATKYCPNSDILWLMAAKHK 627 Query 119 VLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 + + E ARAI A S + M++ E I A + +E +RARAL ER Sbjct 628 WIQGDVESARAILADAYS-KNMDV-ESISLAAVKLEREHDEFERARALLER 676 > cpv:cgd7_970 Syf1p. protein with 8 HAT domains ; K12867 pre-mRNA-splicing factor SYF1 Length=1020 Score = 36.2 bits (82), Expect = 0.060, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 9/85 (10%) Query 94 RQIHAKFIETYPLNPKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPEL------IW 147 R + +IE Y L W + IE+E+ E A + ++ M + + ++ IW Sbjct 565 RSLSEDYIEDYSL---IWTEWIEMELRFGNFEEALNLSRRSICMAKEQKSKITLRNGRIW 621 Query 148 KAYIDMEVNWGALDRARALYERLLD 172 D+E+++G L+ +RAL E L + Sbjct 622 NLAADLEMSFGTLESSRALIEDLFE 646 Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 0/43 (0%) Query 127 ARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYER 169 AR I E ++S + +E LIW +I+ME+ +G + A L R Sbjct 559 ARDIFERSLSEDYIEDYSLIWTEWIEMELRFGNFEEALNLSRR 601 > sce:YMR229C RRP5; RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both 18S and 5.8S rRNAs; component of both the ribosomal small subunit (SSU) processosome and the 90S preribosome; K14792 rRNA biogenesis protein RRP5 Length=1729 Score = 36.2 bits (82), Expect = 0.064, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 85/211 (40%), Gaps = 47/211 (22%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEVVPHK--------------------------- 36 +W++Y F+ LQ ++++ R + E+AL+ + + Sbjct 1477 VWMNYMAFQ-LQLSEIEKARELAERALKTINFREEAEKLNIWIAMLNLENTFGTEETLEE 1535 Query 37 LFSFAKLWT--------LFVAFEIRQLNLERARKIFGAAIGKCGKEK--IFQAYAQLELR 86 +FS A + L +EI + ++A ++F A K G EK I+ ++ + Sbjct 1536 VFSRACQYMDSYTIHTKLLGIYEISE-KFDKAAELFKATAKKFGGEKVSIWVSWGDFLIS 1594 Query 87 LGNIDRCRQIHAKFIETYPLNPKAWI--QMIELEVLAEETERARAICEIAVSMEQMEMPE 144 R I ++ P + + +LE + ER R++ E V+ + P+ Sbjct 1595 HNEEQEARTILGNALKALPKRNHIEVVRKFAQLEFAKGDPERGRSLFEGLVA----DAPK 1650 Query 145 LI--WKAYIDMEVNWGALDRARALYERLLDK 173 I W Y+D EV + L+ER++ K Sbjct 1651 RIDLWNVYVDQEVKAKDKKKVEDLFERIITK 1681 > cel:C50F2.3 hypothetical protein; K12867 pre-mRNA-splicing factor SYF1 Length=855 Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust. Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 9/162 (5%) Query 4 IWISY--ALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERAR 61 IW +Y + K ++R R ++E+ LE P + ++ L+ E A Sbjct 560 IWNTYLVKFIKRYGGKKLERARDLFEQCLENCPPTHAKY--IFLLYAKLEEEHGLARHAL 617 Query 62 KIFG---AAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQM--IE 116 I+ + + + ++ Y + + I +CR I + I P + + + + Sbjct 618 SIYNRACSGVDRADMHSMYNIYIKKVQEMYGIAQCRPIFERAISELPEDKSRAMSLRYAQ 677 Query 117 LEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWG 158 LE E +RARAI A + ++ W + + EV G Sbjct 678 LETTVGEIDRARAIYAHAAEISDPKVHVKFWDTWKNFEVAHG 719 Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 49/208 (23%) Query 4 IWISYALFEELQAKDMDRCRSVYEKALEV---VPHKLFSFA------------------- 41 +W YA +EE ++ CR VY+K +E+ P + ++A Sbjct 490 LWAMYADYEEC-CGTVESCRKVYDKMIELRVASPQMIMNYAMFLEENEYFELAFQAYEKG 548 Query 42 ----------KLWTLFVAFEIRQLN---LERARKIFGAAIGKCGKEK---IFQAYAQLEL 85 +W ++ I++ LERAR +F + C IF YA+LE Sbjct 549 IALFKWPGVFDIWNTYLVKFIKRYGGKKLERARDLFEQCLENCPPTHAKYIFLLYAKLEE 608 Query 86 RLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVLAE--ETERARAICEIAVSMEQMEMP 143 G I+ + + I ++ + E + R I E A+S E+P Sbjct 609 EHGLARHALSIYNRACSGVDRADMHSMYNIYIKKVQEMYGIAQCRPIFERAIS----ELP 664 Query 144 ELIWKA----YIDMEVNWGALDRARALY 167 E +A Y +E G +DRARA+Y Sbjct 665 EDKSRAMSLRYAQLETTVGEIDRARAIY 692 Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 8/141 (5%) Query 3 YIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARK 62 YI++ YA EE S+Y +A V ++ +++ + + R Sbjct 598 YIFLLYAKLEEEHGL-ARHALSIYNRACSGVDRA--DMHSMYNIYIKKVQEMYGIAQCRP 654 Query 63 IFGAAIGKCGKEK---IFQAYAQLELRLGNIDRCRQI--HAKFIETYPLNPKAWIQMIEL 117 IF AI + ++K + YAQLE +G IDR R I HA I ++ K W Sbjct 655 IFERAISELPEDKSRAMSLRYAQLETTVGEIDRARAIYAHAAEISDPKVHVKFWDTWKNF 714 Query 118 EVLAEETERARAICEIAVSME 138 EV R + + S+E Sbjct 715 EVAHGNEATVRDMLRVRRSVE 735 Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust. Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 22/196 (11%) Query 4 IWISYA-LFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARK 62 +WI A L+E+ D+D R +E A+ + A +W + E++ + A Sbjct 403 LWIGLAKLYED--NGDLDAARKTFETAVISQFGGVSELANVWCAYAEMEMKHKRAKAALT 460 Query 63 IFGAA--IGKCGKEKIFQA--------------YAQLELRLGNIDRCRQIHAKFIETYPL 106 + A + K G + Q+ YA E G ++ CR+++ K IE Sbjct 461 VMQRACVVPKPGDYENMQSVQARVHRSPILWAMYADYEECCGTVESCRKVYDKMIELRVA 520 Query 107 NPKAWIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKAYIDMEVN-WGA--LDRA 163 +P+ + E E A E +++ + IW Y+ + +G L+RA Sbjct 521 SPQMIMNYAMFLEENEYFELAFQAYEKGIALFKWPGVFDIWNTYLVKFIKRYGGKKLERA 580 Query 164 RALYERLLDKTQHVNA 179 R L+E+ L+ +A Sbjct 581 RDLFEQCLENCPPTHA 596 Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%) Query 43 LWTLFVAFEIRQLNLERARKIFGAAIGKCGK----EKIFQAYAQLELR 86 LW + IR ERAR ++ AI K +++ AYA E R Sbjct 265 LWCSLADYYIRSAEFERARDVYEEAIAKVSTVRDFAQVYDAYAAFEER 312 > bbo:BBOV_IV005070 23.m05737; hypothetical protein; K14792 rRNA biogenesis protein RRP5 Length=383 Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 22/143 (15%) Query 41 AKLWTLFVAFEIRQLNLERARKIFGAAIGKCGKEKI-FQAYAQ-LELRLGNI-------D 91 A LW ++AF +R +LE AR++ + G E+I F+A ++ L L + NI D Sbjct 122 ASLWIEYMAFHLRNGSLEGARQVV-----RRGLERIDFRAISERLTLWVANINMECLYGD 176 Query 92 RCRQIHAKFIETYPLN-PKA-WIQMIELEVLAEETERARAICEIAVSMEQMEMPELIWKA 149 R +++ F E+ N PK +++MI + V + A +CE + +++ + W+A Sbjct 177 RVKEV---FQESLRFNDPKTMYLKMISIFVKNDRLSDAIEVCERGI--KKLGKSKKFWQA 231 Query 150 YIDMEV-NWGALDRARALYERLL 171 Y+ + + + AR +Y R L Sbjct 232 YLRLLFEHVKDFEEARKVYNRCL 254 > xla:734636 prpf39.1, MGC115228, prpf39; PRP39 pre-mRNA processing factor 39 homolog, gene 1; K13217 pre-mRNA-processing factor 39 Length=641 Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 16/156 (10%) Query 26 YEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERARKIFGAAIGK---CGKEKIFQAYAQ 82 Y K+++ P WT + + ++ +L ARK F A + C ++ YA Sbjct 59 YWKSVQAYPEDF----NTWTYLLQYVEQENHLFAARKAFDAFLAHYPYCYG--YWKKYAD 112 Query 83 LELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIEL--EVL----AEETERARAICEIAVS 136 LE + NI +++ + I+ L+ W+ + E L E + R E AV Sbjct 113 LEKKNNNILEADEVYRRGIQAITLSVDLWMHYLNFLKETLDPADPETSLTLRGTFEHAVV 172 Query 137 MEQMEM-PELIWKAYIDMEVNWGALDRARALYERLL 171 ++ + +W+ YI+ E G L ++Y RLL Sbjct 173 SAGLDFRSDKLWEMYINWETEQGNLSGVTSIYSRLL 208 Lambda K H 0.326 0.137 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 4795148792 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40