bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_4970_orf1
Length=130
Score E
Sequences producing significant alignments: (Bits) Value
ath:AT3G05530 RPT5A; RPT5A (REGULATORY PARTICLE TRIPLE-A ATPAS... 210 7e-55
ath:AT1G09100 RPT5B; RPT5B (26S proteasome AAA-ATPase subunit ... 210 8e-55
xla:379941 nthl1, MGC64280, psmc3, psmc3-a; nth endonuclease I... 205 2e-53
mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S su... 205 2e-53
hsa:5702 PSMC3, MGC8487, TBP1; proteasome (prosome, macropain)... 205 3e-53
dre:321947 psmc3, wu:fb39a02, zgc:86713; proteasome (prosome, ... 205 3e-53
xla:379370 psmc3, MGC53343, psmc3-b, tbp10; proteasome (prosom... 205 3e-53
cpv:cgd2_1350 26S proteasome regulatory subunit, S6a like AAA ... 201 6e-52
cel:F56H1.4 rpt-5; proteasome Regulatory Particle, ATPase-like... 200 9e-52
tgo:TGME49_100310 26S protease regulatory subunit 6a, putative... 194 4e-50
tpv:TP01_0290 26S proteasome subunit; K03065 26S proteasome re... 187 1e-47
bbo:BBOV_IV004580 23.m06430; 26S protease regulatory subunit 6... 177 7e-45
pfa:PF11_0314 26S protease subunit regulatory subunit 6a, puta... 176 2e-44
sce:YOR117W RPT5, YTA1; One of six ATPases of the 19S regulato... 175 2e-44
cel:F23F12.6 rpt-3; proteasome Regulatory Particle, ATPase-lik... 67.8 7e-12
cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like... 67.8 8e-12
bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit... 67.0 1e-11
cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA AT... 67.0 1e-11
pfa:PFD0665c 26S proteasome AAA-ATPase subunit RPT3, putative ... 64.7 7e-11
xla:398853 psmc4, MGC68784; proteasome (prosome, macropain) 26... 64.7 8e-11
pfa:PF10_0081 26S proteasome regulatory subunit 4, putative; K... 64.7 8e-11
xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, mac... 64.3 9e-11
dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,... 64.3 1e-10
dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome (p... 64.3 1e-10
mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macro... 63.9 1e-10
hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome ... 63.9 1e-10
dre:326884 psmc4, wu:fe38b10, zgc:63709; proteasome (prosome, ... 63.5 2e-10
cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA A... 63.2 2e-10
tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4... 62.8 2e-10
hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S... 62.8 2e-10
mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome... 62.8 2e-10
hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7;... 62.8 2e-10
ath:AT2G20140 26S protease regulatory complex subunit 4, putat... 62.8 3e-10
ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a)... 62.4 3e-10
sce:YDL007W RPT2, YHS4, YTA5; One of six ATPases of the 19S re... 62.4 3e-10
ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE ... 62.4 4e-10
tgo:TGME49_029950 26S protease regulatory subunit 6b, putative... 61.6 5e-10
tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062 ... 60.1 2e-09
sce:YDR394W RPT3, YNT1, YTA2; One of six ATPases of the 19S re... 56.2 2e-08
bbo:BBOV_IV009290 23.m06008; 26S protease regulatory subunit 4... 55.8 3e-08
ath:AT1G53750 RPT1A; RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ... 54.7 7e-08
dre:393941 psmc2, MGC63995, zgc:63995; proteasome (prosome, ma... 54.3 8e-08
xla:399327 psmc2, xMSS1; proteasome (prosome, macropain) 26S s... 54.3 9e-08
mmu:19181 Psmc2; proteasome (prosome, macropain) 26S subunit, ... 54.3 9e-08
cel:C10G11.8 ATPase; hypothetical protein; K03062 26S proteaso... 54.3 1e-07
cel:C52E4.4 rpt-1; proteasome Regulatory Particle, ATPase-like... 54.3 1e-07
ath:AT1G53780 ATP binding / ATPase/ hydrolase/ nucleoside-trip... 53.9 1e-07
tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S ... 52.8 3e-07
ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03... 52.0 5e-07
tgo:TGME49_077500 26S proteasome AAA-ATPase subunit RPT1, puta... 51.6 6e-07
> ath:AT3G05530 RPT5A; RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE
5A); ATPase/ calmodulin binding; K03065 26S proteasome regulatory
subunit T5
Length=424
Score = 210 bits (535), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 98/132 (74%), Positives = 121/132 (91%), Gaps = 2/132 (1%)
Query 1 EKIRLNKQLPYLVGSVVELF--DNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPV 58
EKI+LNKQLPYLVG++VE+ + E++ E+DGA D+D QRKGKC+V+KTSTRQT+FLPV
Sbjct 62 EKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 121
Query 59 IGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118
+GLV+ D LKPGDLVGVNKDSYL+LD LP+EYD+RVKAMEVDE+PTE+Y+D+GGL+KQIQ
Sbjct 122 VGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 181
Query 119 ELIEAIVLPMTH 130
EL+EAIVLPMTH
Sbjct 182 ELVEAIVLPMTH 193
> ath:AT1G09100 RPT5B; RPT5B (26S proteasome AAA-ATPase subunit
RPT5B); ATPase/ calmodulin binding; K03065 26S proteasome
regulatory subunit T5
Length=423
Score = 210 bits (535), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 98/132 (74%), Positives = 121/132 (91%), Gaps = 2/132 (1%)
Query 1 EKIRLNKQLPYLVGSVVELFDN--EEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPV 58
EKI+LNKQLPYLVG++VE+ + E++ E+DGA D+D QRKGKC+V+KTSTRQT+FLPV
Sbjct 61 EKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
Query 59 IGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118
+GLV+ D LKPGDLVGVNKDSYL+LD LP+EYD+RVKAMEVDE+PTE+Y+D+GGL+KQIQ
Sbjct 121 VGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180
Query 119 ELIEAIVLPMTH 130
EL+EAIVLPMTH
Sbjct 181 ELVEAIVLPMTH 192
> xla:379941 nthl1, MGC64280, psmc3, psmc3-a; nth endonuclease
III-like 1 (EC:4.2.99.18); K03065 26S proteasome regulatory
subunit T5
Length=405
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/131 (75%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59
EKI++NK LPYLV +V+EL D + + E+DGA D+D QRKGKC VIKTSTRQT FLPVI
Sbjct 62 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 121
Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119
GLV+A++LKPGDLVGVNKDSYL+L+ LP EYD+RVKAMEVDERPTE+YSD+GGLDKQIQE
Sbjct 122 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 181
Query 120 LIEAIVLPMTH 130
L+EAIVLPM H
Sbjct 182 LVEAIVLPMNH 192
> mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S
subunit, ATPase 3; K03065 26S proteasome regulatory subunit
T5
Length=442
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/131 (75%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59
EKI++NK LPYLV +V+EL D + + E+DGA D+D QRKGKC VIKTSTRQT FLPVI
Sbjct 81 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 140
Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119
GLV+A++LKPGDLVGVNKDSYL+L+ LP EYD+RVKAMEVDERPTE+YSD+GGLDKQIQE
Sbjct 141 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 200
Query 120 LIEAIVLPMTH 130
L+EAIVLPM H
Sbjct 201 LVEAIVLPMNH 211
> hsa:5702 PSMC3, MGC8487, TBP1; proteasome (prosome, macropain)
26S subunit, ATPase, 3; K03065 26S proteasome regulatory
subunit T5
Length=439
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/131 (75%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59
EKI++NK LPYLV +V+EL D + + E+DGA D+D QRKGKC VIKTSTRQT FLPVI
Sbjct 78 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 137
Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119
GLV+A++LKPGDLVGVNKDSYL+L+ LP EYD+RVKAMEVDERPTE+YSD+GGLDKQIQE
Sbjct 138 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 197
Query 120 LIEAIVLPMTH 130
L+EAIVLPM H
Sbjct 198 LVEAIVLPMNH 208
> dre:321947 psmc3, wu:fb39a02, zgc:86713; proteasome (prosome,
macropain) 26S subunit, ATPase, 3; K03065 26S proteasome regulatory
subunit T5
Length=404
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/131 (75%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59
EKI++NK LPYLV +V+EL D + + E+DGA D+D QRKGKC VIKTSTRQT FLPVI
Sbjct 43 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 102
Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119
GLV+A++LKPGDLVGVNKDSYL+L+ LP EYD+RVKAMEVDERPTE+YSD+GGLDKQIQE
Sbjct 103 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 162
Query 120 LIEAIVLPMTH 130
L+EAIVLPM H
Sbjct 163 LVEAIVLPMNH 173
> xla:379370 psmc3, MGC53343, psmc3-b, tbp10; proteasome (prosome,
macropain) 26S subunit, ATPase, 3; K03065 26S proteasome
regulatory subunit T5
Length=423
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/131 (75%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59
EKI++NK LPYLV +V+EL D + + E+DGA D+D QRKGKC VIKTSTRQT FLPVI
Sbjct 62 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 121
Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119
GLV+A++LKPGDLVGVNKDSYL+L+ LP EYD+RVKAMEVDERPTE+YSD+GGLDKQIQE
Sbjct 122 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 181
Query 120 LIEAIVLPMTH 130
L+EAIVLPM H
Sbjct 182 LVEAIVLPMNH 192
> cpv:cgd2_1350 26S proteasome regulatory subunit, S6a like AAA
ATpase ; K03065 26S proteasome regulatory subunit T5
Length=461
Score = 201 bits (510), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 112/130 (86%), Gaps = 0/130 (0%)
Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60
EKI+LNKQLPYLV ++VE D +E E++G + D + KC+VIKTS+RQTVFLPVIG
Sbjct 100 EKIKLNKQLPYLVANIVESLDFSDEQENEGEGMEFDGDKNDKCMVIKTSSRQTVFLPVIG 159
Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120
LV ++LKPGDLVGVNKDSYL+LDKLP EYD+RVKAMEVDERP EEYSD+GGLDKQIQEL
Sbjct 160 LVPENELKPGDLVGVNKDSYLILDKLPPEYDSRVKAMEVDERPMEEYSDIGGLDKQIQEL 219
Query 121 IEAIVLPMTH 130
+EAIVLPMTH
Sbjct 220 VEAIVLPMTH 229
> cel:F56H1.4 rpt-5; proteasome Regulatory Particle, ATPase-like
family member (rpt-5); K03065 26S proteasome regulatory subunit
T5
Length=430
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 114/130 (87%), Gaps = 1/130 (0%)
Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60
E+I++NK LPYLV +VVEL D E+ E++GA D+D Q K KC VIKTSTR T FLPV+G
Sbjct 71 ERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLDAQ-KTKCAVIKTSTRATYFLPVVG 129
Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120
LV+ D+LKPGDLVGVNKDSYL+L+KLPAEYD+RVKAMEVDERPTE+YSD+GG DKQIQEL
Sbjct 130 LVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQEL 189
Query 121 IEAIVLPMTH 130
IEA+VLPMTH
Sbjct 190 IEAVVLPMTH 199
> tgo:TGME49_100310 26S protease regulatory subunit 6a, putative
; K03065 26S proteasome regulatory subunit T5
Length=655
Score = 194 bits (494), Expect = 4e-50, Method: Composition-based stats.
Identities = 107/143 (74%), Positives = 119/143 (83%), Gaps = 13/143 (9%)
Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDD--GAATDIDLQRKGKCIVIKTSTRQTVFLPV 58
EKIRLN+QLPYLV +VVELFD+E+ E++ GA DID QRKGKC+VIKTSTRQT+FLPV
Sbjct 220 EKIRLNRQLPYLVANVVELFDSEDAEEEEEDGAVGDIDAQRKGKCVVIKTSTRQTIFLPV 279
Query 59 IGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118
IGLV+ LKPGDLVGVNKDSYLVLDKLPAEYD+RV+AMEVDERP EEY+DVGGLDKQIQ
Sbjct 280 IGLVDHTLLKPGDLVGVNKDSYLVLDKLPAEYDSRVRAMEVDERPQEEYNDVGGLDKQIQ 339
Query 119 ELIEAI-----------VLPMTH 130
ELIEA VLPMTH
Sbjct 340 ELIEATFLPAVSKLVRSVLPMTH 362
> tpv:TP01_0290 26S proteasome subunit; K03065 26S proteasome
regulatory subunit T5
Length=419
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/131 (74%), Positives = 115/131 (87%), Gaps = 1/131 (0%)
Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59
EKI+LNKQLPYLV +VVEL D +EE E+ G+A +I+ + KGK +VIKTSTRQT++LPVI
Sbjct 58 EKIQLNKQLPYLVANVVELLDMDEEYEEEYGSAQNIESKPKGKSLVIKTSTRQTIYLPVI 117
Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119
GL+ +LKPG+LVGVNKDSYLVLDKLP EYD RVKAMEV E+PTE+YSD+GGLDKQIQE
Sbjct 118 GLIPHTELKPGELVGVNKDSYLVLDKLPPEYDNRVKAMEVCEKPTEDYSDIGGLDKQIQE 177
Query 120 LIEAIVLPMTH 130
LIEAIVLP+TH
Sbjct 178 LIEAIVLPITH 188
> bbo:BBOV_IV004580 23.m06430; 26S protease regulatory subunit
6A; K03065 26S proteasome regulatory subunit T5
Length=418
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 110/130 (84%), Gaps = 0/130 (0%)
Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60
EKI+LNKQLPYLV +VVEL D E++ +++ + ++ KGK +VIKTSTRQT+FLPVIG
Sbjct 58 EKIQLNKQLPYLVSNVVELLDIEDDDDEEAGVQGVAMKSKGKSLVIKTSTRQTIFLPVIG 117
Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120
L+ +L PGDLVGVNKDSYLVLDKLP EYD RVKAMEV E+P E+YSD+GGLDKQIQEL
Sbjct 118 LIPHTELHPGDLVGVNKDSYLVLDKLPPEYDNRVKAMEVCEKPIEDYSDIGGLDKQIQEL 177
Query 121 IEAIVLPMTH 130
IEAIVLP+TH
Sbjct 178 IEAIVLPITH 187
> pfa:PF11_0314 26S protease subunit regulatory subunit 6a, putative;
K03065 26S proteasome regulatory subunit T5
Length=439
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/148 (60%), Positives = 112/148 (75%), Gaps = 19/148 (12%)
Query 1 EKIRLNKQLPYLVGSVV------------------ELFDNEEEGEDDGAATDIDLQRKGK 42
EKI LNK LPYLV +VV +L+DN + +G DID +++GK
Sbjct 62 EKIHLNKMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGF-RDIDDEKRGK 120
Query 43 CIVIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDER 102
C+VIKTSTRQT+FLPV GL++A +LKPGDLVGVNKDSYL++DKLP EYD RVKAMEV E+
Sbjct 121 CMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEK 180
Query 103 PTEEYSDVGGLDKQIQELIEAIVLPMTH 130
P+E+YSD+GGLDKQI++L+EAIVLPM H
Sbjct 181 PSEDYSDIGGLDKQIEDLVEAIVLPMLH 208
> sce:YOR117W RPT5, YTA1; One of six ATPases of the 19S regulatory
particle of the 26S proteasome involved in the degradation
of ubiquitinated substrates; recruited to the GAL1-10 promoter
region upon induction of transcription; K03065 26S proteasome
regulatory subunit T5
Length=434
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 106/135 (78%), Gaps = 7/135 (5%)
Query 1 EKIRLNKQLPYLVGSVVELFDNEE-------EGEDDGAATDIDLQRKGKCIVIKTSTRQT 53
EKI+ N+QLPYLV +VVE+ D E E G ++D GK V+KTS+RQT
Sbjct 67 EKIKNNRQLPYLVANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQT 126
Query 54 VFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGL 113
VFLP++GLV+ D+LKP DLVGVNKDSYL+LD LP+E+D+RVKAMEVDE+PTE YSDVGGL
Sbjct 127 VFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGL 186
Query 114 DKQIQELIEAIVLPM 128
DKQI+EL+EAIVLPM
Sbjct 187 DKQIEELVEAIVLPM 201
> cel:F23F12.6 rpt-3; proteasome Regulatory Particle, ATPase-like
family member (rpt-3); K03063 26S proteasome regulatory
subunit T3
Length=414
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ ++T ++ V+ +++ + LKPG V ++K S ++D LP E D+ ++ + DE+P
Sbjct 98 IVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPD 157
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
Y D+GGLD Q QE+ EA+ LP+TH
Sbjct 158 ISYGDIGGLDMQKQEVREAVELPLTH 183
> cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like
family member (rpt-2); K03062 26S proteasome regulatory subunit
T2
Length=443
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 19/121 (15%)
Query 10 PYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIGLVEADQLKP 69
P VGS+ E+ D++ ++ T+ ++ ++ V+ +QL+P
Sbjct 109 PMAVGSLEEIIDDQH-------------------AIVSTNVGSEHYVNIMSFVDKEQLEP 149
Query 70 GDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQELIEAIVLPMT 129
G V +N ++ V+ L + D V M++++ P E Y+DVGGLD+QIQE+ EA+ LP+T
Sbjct 150 GCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLT 209
Query 130 H 130
H
Sbjct 210 H 210
> bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit
Rpt3; K03063 26S proteasome regulatory subunit T3
Length=399
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query 35 IDLQRKGKCIVIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARV 94
+D+ K IV T+ ++ ++ + +QL P V +++ S+ ++D LP E D+ +
Sbjct 73 LDMVDKNHAIVSSTAG-SNYYVRILSTINREQLVPNTSVALHRHSHSIVDLLPPEADSSI 131
Query 95 KAMEVDERPTEEYSDVGGLDKQIQELIEAIVLPMT 129
+ M++ +RP Y+D+GGLD Q QE+ EA+ LP+T
Sbjct 132 QMMQISDRPDVSYADIGGLDAQKQEVREAVELPLT 166
> cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA
ATpase ; K03062 26S proteasome regulatory subunit T2
Length=445
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 55/86 (63%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ +S ++ ++ V+ +QL+PG V ++ Y V+ + E D V M+VD+ P
Sbjct 127 IVSSSVGSEYYVNILSFVDKNQLEPGSSVLLHNKVYSVVGIMNDEVDPLVSVMKVDKAPL 186
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E Y+D+GGL++QIQE+ EA+ +P+TH
Sbjct 187 ESYADIGGLEQQIQEIKEAVEIPLTH 212
> pfa:PFD0665c 26S proteasome AAA-ATPase subunit RPT3, putative
(EC:3.6.4.8); K03063 26S proteasome regulatory subunit T3
Length=392
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 56/85 (65%), Gaps = 0/85 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ ++ ++ ++ + + LKP V +++ S+ +++ LP+E D+ ++ +++ ERP
Sbjct 75 IVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPN 134
Query 105 EEYSDVGGLDKQIQELIEAIVLPMT 129
+Y+D+GGLD Q QE+ EA+ LP+T
Sbjct 135 VKYTDLGGLDMQKQEMKEAVELPLT 159
> xla:398853 psmc4, MGC68784; proteasome (prosome, macropain)
26S subunit, ATPase, 4; K03063 26S proteasome regulatory subunit
T3
Length=420
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ ++T ++ ++ ++ + LKP V ++K S ++D LP E D+ + + D++P
Sbjct 104 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSITMLTADQKPD 163
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
YSD+GG+D Q QE+ EA+ LP+TH
Sbjct 164 VLYSDIGGMDIQKQEVREAVELPLTH 189
> pfa:PF10_0081 26S proteasome regulatory subunit 4, putative;
K03062 26S proteasome regulatory subunit T2
Length=448
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
+I TS ++ ++ V+ D L+PG V +N + V+ L E D V M+V++ P
Sbjct 130 IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPL 189
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E Y+D+GGL+ QIQE+ EA+ LP+TH
Sbjct 190 ESYADIGGLESQIQEIKEAVELPLTH 215
> xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, macropain)
26S subunit, ATPase, 1; K03062 26S proteasome regulatory
subunit T2
Length=440
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ TS ++ ++ V+ D L+PG V +N + V+ L + D V M+V++ P
Sbjct 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E Y+D+GGLD QIQE+ E++ LP+TH
Sbjct 182 ETYADIGGLDNQIQEIKESVELPLTH 207
> dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,
macropain) 26S subunit, ATPase, 1b; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ TS ++ ++ V+ D L+PG V +N + V+ L + D V M+V++ P
Sbjct 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E Y+D+GGLD QIQE+ E++ LP+TH
Sbjct 182 ETYADIGGLDNQIQEIKESVELPLTH 207
> dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome
(prosome, macropain) 26S subunit, ATPase, 1a; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ TS ++ ++ V+ D L+PG V +N + V+ L + D V M+V++ P
Sbjct 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E Y+D+GGLD QIQE+ E++ LP+TH
Sbjct 182 ETYADIGGLDSQIQEIKESVELPLTH 207
> mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macropain)
26S subunit, ATPase 1; K03062 26S proteasome regulatory
subunit T2
Length=440
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ TS ++ ++ V+ D L+PG V +N + V+ L + D V M+V++ P
Sbjct 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E Y+D+GGLD QIQE+ E++ LP+TH
Sbjct 182 ETYADIGGLDNQIQEIKESVELPLTH 207
> hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome
(prosome, macropain) 26S subunit, ATPase, 1; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ TS ++ ++ V+ D L+PG V +N + V+ L + D V M+V++ P
Sbjct 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E Y+D+GGLD QIQE+ E++ LP+TH
Sbjct 182 ETYADIGGLDNQIQEIKESVELPLTH 207
> dre:326884 psmc4, wu:fe38b10, zgc:63709; proteasome (prosome,
macropain) 26S subunit, ATPase, 4; K03063 26S proteasome regulatory
subunit T3
Length=418
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ ++T ++ ++ ++ + LKP V ++K S ++D LP E D+ + + D++P
Sbjct 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
YSD+GG+D Q QE+ EA+ LP+TH
Sbjct 162 VLYSDIGGMDIQKQEVREAVELPLTH 187
> cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA
ATpase ; K03063 26S proteasome regulatory subunit T3
Length=401
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 70/128 (54%), Gaps = 19/128 (14%)
Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60
E+I+ + +P ++G +E+ D+ R G ++ ++ ++ V+
Sbjct 59 EEIKRIQSVPLVIGQFLEMIDS----------------RYG---IVSSTAGSNYYVRVLS 99
Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120
+ + LKP V +++ S+ ++D LP E D+ ++ +++ E+P YSD+GG+D Q QE+
Sbjct 100 TINREDLKPPASVALHRHSHAIVDILPPEADSSIQMLQMQEKPDVTYSDIGGMDIQKQEV 159
Query 121 IEAIVLPM 128
EA+ LP+
Sbjct 160 REAVELPL 167
> tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4.8);
K03063 26S proteasome regulatory subunit T3
Length=396
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 53/85 (62%), Gaps = 0/85 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ ++ ++ ++ + + L P V +++ S+ V+D LP E D+ ++ ++V E+P
Sbjct 79 IVSSTAGSNYYVRILSTINRELLTPNTSVALHRHSHSVVDILPPEADSSIQMLQVSEKPD 138
Query 105 EEYSDVGGLDKQIQELIEAIVLPMT 129
Y+D+GG+D Q QE+ EA+ LP+T
Sbjct 139 VTYADIGGMDSQKQEIKEAVELPLT 163
> hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S
proteasome regulatory subunit T3
Length=414
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ ++T ++ ++ ++ + LKP V ++K S ++D LP E D+ + + D++P
Sbjct 98 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 157
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
Y+D+GG+D Q QE+ EA+ LP+TH
Sbjct 158 VMYADIGGMDIQKQEVREAVELPLTH 183
> mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome,
macropain) 26S subunit, ATPase, 4; K03063 26S proteasome
regulatory subunit T3
Length=418
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ ++T ++ ++ ++ + LKP V ++K S ++D LP E D+ + + D++P
Sbjct 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
Y+D+GG+D Q QE+ EA+ LP+TH
Sbjct 162 VMYADIGGMDIQKQEVREAVELPLTH 187
> hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7;
proteasome (prosome, macropain) 26S subunit, ATPase, 4; K03063
26S proteasome regulatory subunit T3
Length=418
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ ++T ++ ++ ++ + LKP V ++K S ++D LP E D+ + + D++P
Sbjct 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
Y+D+GG+D Q QE+ EA+ LP+TH
Sbjct 162 VMYADIGGMDIQKQEVREAVELPLTH 187
> ath:AT2G20140 26S protease regulatory complex subunit 4, putative;
K03062 26S proteasome regulatory subunit T2
Length=443
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ +S ++ ++ V+ DQL+PG + ++ V+ L E D V M+V++ P
Sbjct 125 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 184
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E Y+D+GGL+ QIQE+ EA+ LP+TH
Sbjct 185 ESYADIGGLEAQIQEIKEAVELPLTH 210
> ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a);
ATPase; K03062 26S proteasome regulatory subunit T2
Length=443
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ +S ++ ++ V+ DQL+PG + ++ V+ L E D V M+V++ P
Sbjct 125 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 184
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E Y+D+GGL+ QIQE+ EA+ LP+TH
Sbjct 185 ESYADIGGLEAQIQEIKEAVELPLTH 210
> sce:YDL007W RPT2, YHS4, YTA5; One of six ATPases of the 19S
regulatory particle of the 26S proteasome involved in the degradation
of ubiquitinated substrates; required for normal peptide
hydrolysis by the core 20S particle; K03062 26S proteasome
regulatory subunit T2
Length=437
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ + T ++ ++ V+ + L+PG V ++ + ++ L + D V M++D+ PT
Sbjct 119 IVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPT 178
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E YSD+GGL+ QIQE+ E++ LP+TH
Sbjct 179 ESYSDIGGLESQIQEIKESVELPLTH 204
> ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE
3); ATPase; K03063 26S proteasome regulatory subunit T3
Length=408
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 19/130 (14%)
Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60
E+++ + +P ++G +E+ D Q G ++ ++T ++ ++
Sbjct 67 EEVKRIQSVPLVIGQFMEMVD----------------QNNG---IVGSTTGSNYYVRILS 107
Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120
+ + LKP V +++ S ++D LP E D+ + + E+P Y+D+GG D Q QE+
Sbjct 108 TINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEI 167
Query 121 IEAIVLPMTH 130
EA+ LP+TH
Sbjct 168 REAVELPLTH 177
> tgo:TGME49_029950 26S protease regulatory subunit 6b, putative
; K03063 26S proteasome regulatory subunit T3
Length=409
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 19/129 (14%)
Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60
E+++ + +P ++G +EL N EG ++ ++ + + ++
Sbjct 67 EELKRIQSVPLVIGQFMELI-NANEG------------------IVASTAGSSYVVRILS 107
Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120
+ + LK G V +++ S+ V+D LP E D+ ++ +++ E+P YSD+GG+D Q QE+
Sbjct 108 TLNRELLKTGCSVALHRHSHSVVDILPPEADSTIQTLQMQEKPDVTYSDIGGMDIQKQEI 167
Query 121 IEAIVLPMT 129
EA+ LP+T
Sbjct 168 REAVELPLT 176
> tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062
26S proteasome regulatory subunit T2
Length=441
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ +S ++ ++ V+ D L+PG V ++ + ++ L E D + M+V++ P
Sbjct 123 IVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILNDEVDPLISVMKVEKAPL 182
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E Y+D+GGL+KQIQE+ EA+ P+TH
Sbjct 183 ETYADIGGLEKQIQEVKEAVEFPLTH 208
> sce:YDR394W RPT3, YNT1, YTA2; One of six ATPases of the 19S
regulatory particle of the 26S proteasome involved in the degradation
of ubiquitinated substrates; substrate of N-acetyltransferase
B; K03063 26S proteasome regulatory subunit T3
Length=428
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ ++T + + ++ ++ + LKP V +++ S ++D LP + D+ + M +E+P
Sbjct 109 IVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPD 168
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
Y+DVGGLD Q QE+ EA+ LP+
Sbjct 169 VTYADVGGLDMQKQEIREAVELPLVQ 194
> bbo:BBOV_IV009290 23.m06008; 26S protease regulatory subunit
4; K03062 26S proteasome regulatory subunit T2
Length=438
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ +S ++ ++ V+ L+PG V ++ + V+ L D V M+V+ P
Sbjct 120 IVTSSMGPEYYVNILSFVDKTLLEPGCSVLLHNKTNSVVGILLDAIDPLVSLMKVERAPL 179
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E YSD+GGL+ QIQE+ EA+ LP+TH
Sbjct 180 ESYSDIGGLEDQIQEIKEAVELPLTH 205
> ath:AT1G53750 RPT1A; RPT1A (REGULATORY PARTICLE TRIPLE-A 1A);
ATPase; K03061 26S proteasome regulatory subunit T1
Length=426
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query 58 VIGLVEADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGG 112
V+GL D++ P D+ VGV+++ Y + LP + D V M V+E+P Y+DVGG
Sbjct 115 VVGL--GDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
Query 113 LDKQIQELIEAIVLPMTH 130
+QI+++ E + LPM H
Sbjct 173 CKEQIEKMREVVELPMLH 190
> dre:393941 psmc2, MGC63995, zgc:63995; proteasome (prosome,
macropain) 26S subunit, ATPase 2; K03061 26S proteasome regulatory
subunit T1
Length=433
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query 64 ADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118
+DQ+ P D+ VGV+++ Y + LP + D V M+V+E+P YSDVGG +QI+
Sbjct 126 SDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIE 185
Query 119 ELIEAIVLPMTH 130
+L E + P+ H
Sbjct 186 KLREVVETPLLH 197
> xla:399327 psmc2, xMSS1; proteasome (prosome, macropain) 26S
subunit, ATPase, 2; K03061 26S proteasome regulatory subunit
T1
Length=433
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query 64 ADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118
+DQ+ P D+ VGV+++ Y + LP + D V M+V+E+P YSDVGG +QI+
Sbjct 126 SDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIE 185
Query 119 ELIEAIVLPMTH 130
+L E + P+ H
Sbjct 186 KLREVVETPLLH 197
> mmu:19181 Psmc2; proteasome (prosome, macropain) 26S subunit,
ATPase 2; K03061 26S proteasome regulatory subunit T1
Length=475
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query 64 ADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118
+DQ+ P D+ VGV+++ Y + LP + D V M+V+E+P YSDVGG +QI+
Sbjct 168 SDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIE 227
Query 119 ELIEAIVLPMTH 130
+L E + P+ H
Sbjct 228 KLREVVETPLLH 239
> cel:C10G11.8 ATPase; hypothetical protein; K03062 26S proteasome
regulatory subunit T2
Length=438
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 23/127 (18%)
Query 10 PYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIGLVEADQLKP 69
P + V ELFD+E+ +V+ +R+ ++P++ +V+ D L+
Sbjct 96 PTTLARVHELFDDEKH-----------------AVVVVEGSRREWYVPILSIVDKDLLRL 138
Query 70 GDLVGVNKDSYL------VLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQELIEA 123
LV V ++ L + D+ +V++ P E + D+GG + QIQEL E+
Sbjct 139 NALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKES 198
Query 124 IVLPMTH 130
+ LP+TH
Sbjct 199 VELPLTH 205
> cel:C52E4.4 rpt-1; proteasome Regulatory Particle, ATPase-like
family member (rpt-1); K03061 26S proteasome regulatory subunit
T1
Length=435
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query 64 ADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118
AD + P D+ VGV+++ Y + LPA+ D V M+V+E+P YSDVGG QI+
Sbjct 128 ADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIE 187
Query 119 ELIEAIVLPMTH 130
+L E + P+ H
Sbjct 188 KLREVVETPLLH 199
> ath:AT1G53780 ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/
nucleotide binding / peptidyl-prolyl cis-trans
isomerase; K03061 26S proteasome regulatory subunit T1
Length=598
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query 58 VIGLVEADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGG 112
V+GL D+ P D+ VGV++ Y + LP + D V M V+E+P YSD+GG
Sbjct 286 VVGL--GDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGG 343
Query 113 LDKQIQELIEAIVLPMTH 130
+QI+++ E + LPM H
Sbjct 344 CKEQIEKIREVVELPMLH 361
> tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S
proteasome regulatory subunit T2
Length=415
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 0/86 (0%)
Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104
++ +S ++ ++ V+ + L+PG V ++ + ++ L + D V M+V++ P
Sbjct 97 IVTSSIGPEYYVNILSFVDKELLEPGCSVLLHNKTNSIVGILLDDVDPLVSVMKVEKAPL 156
Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130
E Y D+GGL++QIQE+ EA+ LP+T
Sbjct 157 ESYDDIGGLEEQIQEIKEAVELPLTR 182
> ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03066
26S proteasome regulatory subunit T6
Length=419
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 0/69 (0%)
Query 62 VEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQELI 121
++ +L P V + DSY++ LP++ D V M+V++ P Y +GGLD+QI+E+
Sbjct 115 IDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIK 174
Query 122 EAIVLPMTH 130
E I LP+ H
Sbjct 175 EVIELPIKH 183
> tgo:TGME49_077500 26S proteasome AAA-ATPase subunit RPT1, putative
; K03061 26S proteasome regulatory subunit T1
Length=476
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 12/118 (10%)
Query 21 DNEEEGEDDGAATDIDLQRKG-----KCIVIKTSTRQTVFLPVIGL---VEADQLKPGDL 72
+N E GE GA T G K I+ + +Q V+GL V A ++ G
Sbjct 124 ENGENGESGGAGTTAPPPFGGDDEEPKYII---NVKQIAKF-VVGLGEKVAAMDIEEGMR 179
Query 73 VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQELIEAIVLPMTH 130
VGV+++ Y + LP + D V M V+E+P Y+DVGG +Q+++L E + LP+ H
Sbjct 180 VGVDRNKYKIQIPLPPKIDPTVTMMTVEEKPDVTYNDVGGAKEQLEKLREVLELPLLH 237
Lambda K H
0.314 0.137 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2039374804
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40