bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_4970_orf1 Length=130 Score E Sequences producing significant alignments: (Bits) Value ath:AT3G05530 RPT5A; RPT5A (REGULATORY PARTICLE TRIPLE-A ATPAS... 210 7e-55 ath:AT1G09100 RPT5B; RPT5B (26S proteasome AAA-ATPase subunit ... 210 8e-55 xla:379941 nthl1, MGC64280, psmc3, psmc3-a; nth endonuclease I... 205 2e-53 mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S su... 205 2e-53 hsa:5702 PSMC3, MGC8487, TBP1; proteasome (prosome, macropain)... 205 3e-53 dre:321947 psmc3, wu:fb39a02, zgc:86713; proteasome (prosome, ... 205 3e-53 xla:379370 psmc3, MGC53343, psmc3-b, tbp10; proteasome (prosom... 205 3e-53 cpv:cgd2_1350 26S proteasome regulatory subunit, S6a like AAA ... 201 6e-52 cel:F56H1.4 rpt-5; proteasome Regulatory Particle, ATPase-like... 200 9e-52 tgo:TGME49_100310 26S protease regulatory subunit 6a, putative... 194 4e-50 tpv:TP01_0290 26S proteasome subunit; K03065 26S proteasome re... 187 1e-47 bbo:BBOV_IV004580 23.m06430; 26S protease regulatory subunit 6... 177 7e-45 pfa:PF11_0314 26S protease subunit regulatory subunit 6a, puta... 176 2e-44 sce:YOR117W RPT5, YTA1; One of six ATPases of the 19S regulato... 175 2e-44 cel:F23F12.6 rpt-3; proteasome Regulatory Particle, ATPase-lik... 67.8 7e-12 cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like... 67.8 8e-12 bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit... 67.0 1e-11 cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA AT... 67.0 1e-11 pfa:PFD0665c 26S proteasome AAA-ATPase subunit RPT3, putative ... 64.7 7e-11 xla:398853 psmc4, MGC68784; proteasome (prosome, macropain) 26... 64.7 8e-11 pfa:PF10_0081 26S proteasome regulatory subunit 4, putative; K... 64.7 8e-11 xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, mac... 64.3 9e-11 dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,... 64.3 1e-10 dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome (p... 64.3 1e-10 mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macro... 63.9 1e-10 hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome ... 63.9 1e-10 dre:326884 psmc4, wu:fe38b10, zgc:63709; proteasome (prosome, ... 63.5 2e-10 cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA A... 63.2 2e-10 tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4... 62.8 2e-10 hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S... 62.8 2e-10 mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome... 62.8 2e-10 hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7;... 62.8 2e-10 ath:AT2G20140 26S protease regulatory complex subunit 4, putat... 62.8 3e-10 ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a)... 62.4 3e-10 sce:YDL007W RPT2, YHS4, YTA5; One of six ATPases of the 19S re... 62.4 3e-10 ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE ... 62.4 4e-10 tgo:TGME49_029950 26S protease regulatory subunit 6b, putative... 61.6 5e-10 tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062 ... 60.1 2e-09 sce:YDR394W RPT3, YNT1, YTA2; One of six ATPases of the 19S re... 56.2 2e-08 bbo:BBOV_IV009290 23.m06008; 26S protease regulatory subunit 4... 55.8 3e-08 ath:AT1G53750 RPT1A; RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ... 54.7 7e-08 dre:393941 psmc2, MGC63995, zgc:63995; proteasome (prosome, ma... 54.3 8e-08 xla:399327 psmc2, xMSS1; proteasome (prosome, macropain) 26S s... 54.3 9e-08 mmu:19181 Psmc2; proteasome (prosome, macropain) 26S subunit, ... 54.3 9e-08 cel:C10G11.8 ATPase; hypothetical protein; K03062 26S proteaso... 54.3 1e-07 cel:C52E4.4 rpt-1; proteasome Regulatory Particle, ATPase-like... 54.3 1e-07 ath:AT1G53780 ATP binding / ATPase/ hydrolase/ nucleoside-trip... 53.9 1e-07 tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S ... 52.8 3e-07 ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03... 52.0 5e-07 tgo:TGME49_077500 26S proteasome AAA-ATPase subunit RPT1, puta... 51.6 6e-07 > ath:AT3G05530 RPT5A; RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A); ATPase/ calmodulin binding; K03065 26S proteasome regulatory subunit T5 Length=424 Score = 210 bits (535), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 98/132 (74%), Positives = 121/132 (91%), Gaps = 2/132 (1%) Query 1 EKIRLNKQLPYLVGSVVELF--DNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPV 58 EKI+LNKQLPYLVG++VE+ + E++ E+DGA D+D QRKGKC+V+KTSTRQT+FLPV Sbjct 62 EKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 121 Query 59 IGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118 +GLV+ D LKPGDLVGVNKDSYL+LD LP+EYD+RVKAMEVDE+PTE+Y+D+GGL+KQIQ Sbjct 122 VGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 181 Query 119 ELIEAIVLPMTH 130 EL+EAIVLPMTH Sbjct 182 ELVEAIVLPMTH 193 > ath:AT1G09100 RPT5B; RPT5B (26S proteasome AAA-ATPase subunit RPT5B); ATPase/ calmodulin binding; K03065 26S proteasome regulatory subunit T5 Length=423 Score = 210 bits (535), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 98/132 (74%), Positives = 121/132 (91%), Gaps = 2/132 (1%) Query 1 EKIRLNKQLPYLVGSVVELFDN--EEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPV 58 EKI+LNKQLPYLVG++VE+ + E++ E+DGA D+D QRKGKC+V+KTSTRQT+FLPV Sbjct 61 EKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120 Query 59 IGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118 +GLV+ D LKPGDLVGVNKDSYL+LD LP+EYD+RVKAMEVDE+PTE+Y+D+GGL+KQIQ Sbjct 121 VGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180 Query 119 ELIEAIVLPMTH 130 EL+EAIVLPMTH Sbjct 181 ELVEAIVLPMTH 192 > xla:379941 nthl1, MGC64280, psmc3, psmc3-a; nth endonuclease III-like 1 (EC:4.2.99.18); K03065 26S proteasome regulatory subunit T5 Length=405 Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 99/131 (75%), Positives = 116/131 (88%), Gaps = 1/131 (0%) Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59 EKI++NK LPYLV +V+EL D + + E+DGA D+D QRKGKC VIKTSTRQT FLPVI Sbjct 62 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 121 Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119 GLV+A++LKPGDLVGVNKDSYL+L+ LP EYD+RVKAMEVDERPTE+YSD+GGLDKQIQE Sbjct 122 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 181 Query 120 LIEAIVLPMTH 130 L+EAIVLPM H Sbjct 182 LVEAIVLPMNH 192 > mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S subunit, ATPase 3; K03065 26S proteasome regulatory subunit T5 Length=442 Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 99/131 (75%), Positives = 116/131 (88%), Gaps = 1/131 (0%) Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59 EKI++NK LPYLV +V+EL D + + E+DGA D+D QRKGKC VIKTSTRQT FLPVI Sbjct 81 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 140 Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119 GLV+A++LKPGDLVGVNKDSYL+L+ LP EYD+RVKAMEVDERPTE+YSD+GGLDKQIQE Sbjct 141 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 200 Query 120 LIEAIVLPMTH 130 L+EAIVLPM H Sbjct 201 LVEAIVLPMNH 211 > hsa:5702 PSMC3, MGC8487, TBP1; proteasome (prosome, macropain) 26S subunit, ATPase, 3; K03065 26S proteasome regulatory subunit T5 Length=439 Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 99/131 (75%), Positives = 116/131 (88%), Gaps = 1/131 (0%) Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59 EKI++NK LPYLV +V+EL D + + E+DGA D+D QRKGKC VIKTSTRQT FLPVI Sbjct 78 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 137 Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119 GLV+A++LKPGDLVGVNKDSYL+L+ LP EYD+RVKAMEVDERPTE+YSD+GGLDKQIQE Sbjct 138 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 197 Query 120 LIEAIVLPMTH 130 L+EAIVLPM H Sbjct 198 LVEAIVLPMNH 208 > dre:321947 psmc3, wu:fb39a02, zgc:86713; proteasome (prosome, macropain) 26S subunit, ATPase, 3; K03065 26S proteasome regulatory subunit T5 Length=404 Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 99/131 (75%), Positives = 116/131 (88%), Gaps = 1/131 (0%) Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59 EKI++NK LPYLV +V+EL D + + E+DGA D+D QRKGKC VIKTSTRQT FLPVI Sbjct 43 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 102 Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119 GLV+A++LKPGDLVGVNKDSYL+L+ LP EYD+RVKAMEVDERPTE+YSD+GGLDKQIQE Sbjct 103 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 162 Query 120 LIEAIVLPMTH 130 L+EAIVLPM H Sbjct 163 LVEAIVLPMNH 173 > xla:379370 psmc3, MGC53343, psmc3-b, tbp10; proteasome (prosome, macropain) 26S subunit, ATPase, 3; K03065 26S proteasome regulatory subunit T5 Length=423 Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 99/131 (75%), Positives = 116/131 (88%), Gaps = 1/131 (0%) Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59 EKI++NK LPYLV +V+EL D + + E+DGA D+D QRKGKC VIKTSTRQT FLPVI Sbjct 62 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVI 121 Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119 GLV+A++LKPGDLVGVNKDSYL+L+ LP EYD+RVKAMEVDERPTE+YSD+GGLDKQIQE Sbjct 122 GLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQE 181 Query 120 LIEAIVLPMTH 130 L+EAIVLPM H Sbjct 182 LVEAIVLPMNH 192 > cpv:cgd2_1350 26S proteasome regulatory subunit, S6a like AAA ATpase ; K03065 26S proteasome regulatory subunit T5 Length=461 Score = 201 bits (510), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 96/130 (73%), Positives = 112/130 (86%), Gaps = 0/130 (0%) Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60 EKI+LNKQLPYLV ++VE D +E E++G + D + KC+VIKTS+RQTVFLPVIG Sbjct 100 EKIKLNKQLPYLVANIVESLDFSDEQENEGEGMEFDGDKNDKCMVIKTSSRQTVFLPVIG 159 Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120 LV ++LKPGDLVGVNKDSYL+LDKLP EYD+RVKAMEVDERP EEYSD+GGLDKQIQEL Sbjct 160 LVPENELKPGDLVGVNKDSYLILDKLPPEYDSRVKAMEVDERPMEEYSDIGGLDKQIQEL 219 Query 121 IEAIVLPMTH 130 +EAIVLPMTH Sbjct 220 VEAIVLPMTH 229 > cel:F56H1.4 rpt-5; proteasome Regulatory Particle, ATPase-like family member (rpt-5); K03065 26S proteasome regulatory subunit T5 Length=430 Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 97/130 (74%), Positives = 114/130 (87%), Gaps = 1/130 (0%) Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60 E+I++NK LPYLV +VVEL D E+ E++GA D+D Q K KC VIKTSTR T FLPV+G Sbjct 71 ERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLDAQ-KTKCAVIKTSTRATYFLPVVG 129 Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120 LV+ D+LKPGDLVGVNKDSYL+L+KLPAEYD+RVKAMEVDERPTE+YSD+GG DKQIQEL Sbjct 130 LVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQEL 189 Query 121 IEAIVLPMTH 130 IEA+VLPMTH Sbjct 190 IEAVVLPMTH 199 > tgo:TGME49_100310 26S protease regulatory subunit 6a, putative ; K03065 26S proteasome regulatory subunit T5 Length=655 Score = 194 bits (494), Expect = 4e-50, Method: Composition-based stats. Identities = 107/143 (74%), Positives = 119/143 (83%), Gaps = 13/143 (9%) Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDD--GAATDIDLQRKGKCIVIKTSTRQTVFLPV 58 EKIRLN+QLPYLV +VVELFD+E+ E++ GA DID QRKGKC+VIKTSTRQT+FLPV Sbjct 220 EKIRLNRQLPYLVANVVELFDSEDAEEEEEDGAVGDIDAQRKGKCVVIKTSTRQTIFLPV 279 Query 59 IGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118 IGLV+ LKPGDLVGVNKDSYLVLDKLPAEYD+RV+AMEVDERP EEY+DVGGLDKQIQ Sbjct 280 IGLVDHTLLKPGDLVGVNKDSYLVLDKLPAEYDSRVRAMEVDERPQEEYNDVGGLDKQIQ 339 Query 119 ELIEAI-----------VLPMTH 130 ELIEA VLPMTH Sbjct 340 ELIEATFLPAVSKLVRSVLPMTH 362 > tpv:TP01_0290 26S proteasome subunit; K03065 26S proteasome regulatory subunit T5 Length=419 Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 97/131 (74%), Positives = 115/131 (87%), Gaps = 1/131 (0%) Query 1 EKIRLNKQLPYLVGSVVELFD-NEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI 59 EKI+LNKQLPYLV +VVEL D +EE E+ G+A +I+ + KGK +VIKTSTRQT++LPVI Sbjct 58 EKIQLNKQLPYLVANVVELLDMDEEYEEEYGSAQNIESKPKGKSLVIKTSTRQTIYLPVI 117 Query 60 GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE 119 GL+ +LKPG+LVGVNKDSYLVLDKLP EYD RVKAMEV E+PTE+YSD+GGLDKQIQE Sbjct 118 GLIPHTELKPGELVGVNKDSYLVLDKLPPEYDNRVKAMEVCEKPTEDYSDIGGLDKQIQE 177 Query 120 LIEAIVLPMTH 130 LIEAIVLP+TH Sbjct 178 LIEAIVLPITH 188 > bbo:BBOV_IV004580 23.m06430; 26S protease regulatory subunit 6A; K03065 26S proteasome regulatory subunit T5 Length=418 Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 92/130 (70%), Positives = 110/130 (84%), Gaps = 0/130 (0%) Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60 EKI+LNKQLPYLV +VVEL D E++ +++ + ++ KGK +VIKTSTRQT+FLPVIG Sbjct 58 EKIQLNKQLPYLVSNVVELLDIEDDDDEEAGVQGVAMKSKGKSLVIKTSTRQTIFLPVIG 117 Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120 L+ +L PGDLVGVNKDSYLVLDKLP EYD RVKAMEV E+P E+YSD+GGLDKQIQEL Sbjct 118 LIPHTELHPGDLVGVNKDSYLVLDKLPPEYDNRVKAMEVCEKPIEDYSDIGGLDKQIQEL 177 Query 121 IEAIVLPMTH 130 IEAIVLP+TH Sbjct 178 IEAIVLPITH 187 > pfa:PF11_0314 26S protease subunit regulatory subunit 6a, putative; K03065 26S proteasome regulatory subunit T5 Length=439 Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 90/148 (60%), Positives = 112/148 (75%), Gaps = 19/148 (12%) Query 1 EKIRLNKQLPYLVGSVV------------------ELFDNEEEGEDDGAATDIDLQRKGK 42 EKI LNK LPYLV +VV +L+DN + +G DID +++GK Sbjct 62 EKIHLNKMLPYLVANVVESLDLEDEEEENEIKDEYDLYDNNLKLSHEGF-RDIDDEKRGK 120 Query 43 CIVIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDER 102 C+VIKTSTRQT+FLPV GL++A +LKPGDLVGVNKDSYL++DKLP EYD RVKAMEV E+ Sbjct 121 CMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEK 180 Query 103 PTEEYSDVGGLDKQIQELIEAIVLPMTH 130 P+E+YSD+GGLDKQI++L+EAIVLPM H Sbjct 181 PSEDYSDIGGLDKQIEDLVEAIVLPMLH 208 > sce:YOR117W RPT5, YTA1; One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; recruited to the GAL1-10 promoter region upon induction of transcription; K03065 26S proteasome regulatory subunit T5 Length=434 Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 87/135 (64%), Positives = 106/135 (78%), Gaps = 7/135 (5%) Query 1 EKIRLNKQLPYLVGSVVELFDNEE-------EGEDDGAATDIDLQRKGKCIVIKTSTRQT 53 EKI+ N+QLPYLV +VVE+ D E E G ++D GK V+KTS+RQT Sbjct 67 EKIKNNRQLPYLVANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQT 126 Query 54 VFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGL 113 VFLP++GLV+ D+LKP DLVGVNKDSYL+LD LP+E+D+RVKAMEVDE+PTE YSDVGGL Sbjct 127 VFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGL 186 Query 114 DKQIQELIEAIVLPM 128 DKQI+EL+EAIVLPM Sbjct 187 DKQIEELVEAIVLPM 201 > cel:F23F12.6 rpt-3; proteasome Regulatory Particle, ATPase-like family member (rpt-3); K03063 26S proteasome regulatory subunit T3 Length=414 Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ ++T ++ V+ +++ + LKPG V ++K S ++D LP E D+ ++ + DE+P Sbjct 98 IVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPD 157 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 Y D+GGLD Q QE+ EA+ LP+TH Sbjct 158 ISYGDIGGLDMQKQEVREAVELPLTH 183 > cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like family member (rpt-2); K03062 26S proteasome regulatory subunit T2 Length=443 Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 19/121 (15%) Query 10 PYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIGLVEADQLKP 69 P VGS+ E+ D++ ++ T+ ++ ++ V+ +QL+P Sbjct 109 PMAVGSLEEIIDDQH-------------------AIVSTNVGSEHYVNIMSFVDKEQLEP 149 Query 70 GDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQELIEAIVLPMT 129 G V +N ++ V+ L + D V M++++ P E Y+DVGGLD+QIQE+ EA+ LP+T Sbjct 150 GCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLT 209 Query 130 H 130 H Sbjct 210 H 210 > bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit Rpt3; K03063 26S proteasome regulatory subunit T3 Length=399 Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 58/95 (61%), Gaps = 1/95 (1%) Query 35 IDLQRKGKCIVIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARV 94 +D+ K IV T+ ++ ++ + +QL P V +++ S+ ++D LP E D+ + Sbjct 73 LDMVDKNHAIVSSTAG-SNYYVRILSTINREQLVPNTSVALHRHSHSIVDLLPPEADSSI 131 Query 95 KAMEVDERPTEEYSDVGGLDKQIQELIEAIVLPMT 129 + M++ +RP Y+D+GGLD Q QE+ EA+ LP+T Sbjct 132 QMMQISDRPDVSYADIGGLDAQKQEVREAVELPLT 166 > cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA ATpase ; K03062 26S proteasome regulatory subunit T2 Length=445 Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 55/86 (63%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ +S ++ ++ V+ +QL+PG V ++ Y V+ + E D V M+VD+ P Sbjct 127 IVSSSVGSEYYVNILSFVDKNQLEPGSSVLLHNKVYSVVGIMNDEVDPLVSVMKVDKAPL 186 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E Y+D+GGL++QIQE+ EA+ +P+TH Sbjct 187 ESYADIGGLEQQIQEIKEAVEIPLTH 212 > pfa:PFD0665c 26S proteasome AAA-ATPase subunit RPT3, putative (EC:3.6.4.8); K03063 26S proteasome regulatory subunit T3 Length=392 Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 56/85 (65%), Gaps = 0/85 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ ++ ++ ++ + + LKP V +++ S+ +++ LP+E D+ ++ +++ ERP Sbjct 75 IVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPN 134 Query 105 EEYSDVGGLDKQIQELIEAIVLPMT 129 +Y+D+GGLD Q QE+ EA+ LP+T Sbjct 135 VKYTDLGGLDMQKQEMKEAVELPLT 159 > xla:398853 psmc4, MGC68784; proteasome (prosome, macropain) 26S subunit, ATPase, 4; K03063 26S proteasome regulatory subunit T3 Length=420 Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ ++T ++ ++ ++ + LKP V ++K S ++D LP E D+ + + D++P Sbjct 104 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSITMLTADQKPD 163 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 YSD+GG+D Q QE+ EA+ LP+TH Sbjct 164 VLYSDIGGMDIQKQEVREAVELPLTH 189 > pfa:PF10_0081 26S proteasome regulatory subunit 4, putative; K03062 26S proteasome regulatory subunit T2 Length=448 Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 +I TS ++ ++ V+ D L+PG V +N + V+ L E D V M+V++ P Sbjct 130 IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPL 189 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E Y+D+GGL+ QIQE+ EA+ LP+TH Sbjct 190 ESYADIGGLESQIQEIKEAVELPLTH 215 > xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, macropain) 26S subunit, ATPase, 1; K03062 26S proteasome regulatory subunit T2 Length=440 Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ TS ++ ++ V+ D L+PG V +N + V+ L + D V M+V++ P Sbjct 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E Y+D+GGLD QIQE+ E++ LP+TH Sbjct 182 ETYADIGGLDNQIQEIKESVELPLTH 207 > dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome, macropain) 26S subunit, ATPase, 1b; K03062 26S proteasome regulatory subunit T2 Length=440 Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ TS ++ ++ V+ D L+PG V +N + V+ L + D V M+V++ P Sbjct 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E Y+D+GGLD QIQE+ E++ LP+TH Sbjct 182 ETYADIGGLDNQIQEIKESVELPLTH 207 > dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome (prosome, macropain) 26S subunit, ATPase, 1a; K03062 26S proteasome regulatory subunit T2 Length=440 Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ TS ++ ++ V+ D L+PG V +N + V+ L + D V M+V++ P Sbjct 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E Y+D+GGLD QIQE+ E++ LP+TH Sbjct 182 ETYADIGGLDSQIQEIKESVELPLTH 207 > mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macropain) 26S subunit, ATPase 1; K03062 26S proteasome regulatory subunit T2 Length=440 Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ TS ++ ++ V+ D L+PG V +N + V+ L + D V M+V++ P Sbjct 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E Y+D+GGLD QIQE+ E++ LP+TH Sbjct 182 ETYADIGGLDNQIQEIKESVELPLTH 207 > hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome (prosome, macropain) 26S subunit, ATPase, 1; K03062 26S proteasome regulatory subunit T2 Length=440 Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ TS ++ ++ V+ D L+PG V +N + V+ L + D V M+V++ P Sbjct 122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQ 181 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E Y+D+GGLD QIQE+ E++ LP+TH Sbjct 182 ETYADIGGLDNQIQEIKESVELPLTH 207 > dre:326884 psmc4, wu:fe38b10, zgc:63709; proteasome (prosome, macropain) 26S subunit, ATPase, 4; K03063 26S proteasome regulatory subunit T3 Length=418 Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ ++T ++ ++ ++ + LKP V ++K S ++D LP E D+ + + D++P Sbjct 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 YSD+GG+D Q QE+ EA+ LP+TH Sbjct 162 VLYSDIGGMDIQKQEVREAVELPLTH 187 > cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA ATpase ; K03063 26S proteasome regulatory subunit T3 Length=401 Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 70/128 (54%), Gaps = 19/128 (14%) Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60 E+I+ + +P ++G +E+ D+ R G ++ ++ ++ V+ Sbjct 59 EEIKRIQSVPLVIGQFLEMIDS----------------RYG---IVSSTAGSNYYVRVLS 99 Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120 + + LKP V +++ S+ ++D LP E D+ ++ +++ E+P YSD+GG+D Q QE+ Sbjct 100 TINREDLKPPASVALHRHSHAIVDILPPEADSSIQMLQMQEKPDVTYSDIGGMDIQKQEV 159 Query 121 IEAIVLPM 128 EA+ LP+ Sbjct 160 REAVELPL 167 > tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4.8); K03063 26S proteasome regulatory subunit T3 Length=396 Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 53/85 (62%), Gaps = 0/85 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ ++ ++ ++ + + L P V +++ S+ V+D LP E D+ ++ ++V E+P Sbjct 79 IVSSTAGSNYYVRILSTINRELLTPNTSVALHRHSHSVVDILPPEADSSIQMLQVSEKPD 138 Query 105 EEYSDVGGLDKQIQELIEAIVLPMT 129 Y+D+GG+D Q QE+ EA+ LP+T Sbjct 139 VTYADIGGMDSQKQEIKEAVELPLT 163 > hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S proteasome regulatory subunit T3 Length=414 Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ ++T ++ ++ ++ + LKP V ++K S ++D LP E D+ + + D++P Sbjct 98 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 157 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 Y+D+GG+D Q QE+ EA+ LP+TH Sbjct 158 VMYADIGGMDIQKQEVREAVELPLTH 183 > mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome, macropain) 26S subunit, ATPase, 4; K03063 26S proteasome regulatory subunit T3 Length=418 Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ ++T ++ ++ ++ + LKP V ++K S ++D LP E D+ + + D++P Sbjct 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 Y+D+GG+D Q QE+ EA+ LP+TH Sbjct 162 VMYADIGGMDIQKQEVREAVELPLTH 187 > hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7; proteasome (prosome, macropain) 26S subunit, ATPase, 4; K03063 26S proteasome regulatory subunit T3 Length=418 Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ ++T ++ ++ ++ + LKP V ++K S ++D LP E D+ + + D++P Sbjct 102 IVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPD 161 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 Y+D+GG+D Q QE+ EA+ LP+TH Sbjct 162 VMYADIGGMDIQKQEVREAVELPLTH 187 > ath:AT2G20140 26S protease regulatory complex subunit 4, putative; K03062 26S proteasome regulatory subunit T2 Length=443 Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ +S ++ ++ V+ DQL+PG + ++ V+ L E D V M+V++ P Sbjct 125 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 184 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E Y+D+GGL+ QIQE+ EA+ LP+TH Sbjct 185 ESYADIGGLEAQIQEIKEAVELPLTH 210 > ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a); ATPase; K03062 26S proteasome regulatory subunit T2 Length=443 Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ +S ++ ++ V+ DQL+PG + ++ V+ L E D V M+V++ P Sbjct 125 IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPL 184 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E Y+D+GGL+ QIQE+ EA+ LP+TH Sbjct 185 ESYADIGGLEAQIQEIKEAVELPLTH 210 > sce:YDL007W RPT2, YHS4, YTA5; One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for normal peptide hydrolysis by the core 20S particle; K03062 26S proteasome regulatory subunit T2 Length=437 Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ + T ++ ++ V+ + L+PG V ++ + ++ L + D V M++D+ PT Sbjct 119 IVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPT 178 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E YSD+GGL+ QIQE+ E++ LP+TH Sbjct 179 ESYSDIGGLESQIQEIKESVELPLTH 204 > ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3); ATPase; K03063 26S proteasome regulatory subunit T3 Length=408 Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 19/130 (14%) Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60 E+++ + +P ++G +E+ D Q G ++ ++T ++ ++ Sbjct 67 EEVKRIQSVPLVIGQFMEMVD----------------QNNG---IVGSTTGSNYYVRILS 107 Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120 + + LKP V +++ S ++D LP E D+ + + E+P Y+D+GG D Q QE+ Sbjct 108 TINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEI 167 Query 121 IEAIVLPMTH 130 EA+ LP+TH Sbjct 168 REAVELPLTH 177 > tgo:TGME49_029950 26S protease regulatory subunit 6b, putative ; K03063 26S proteasome regulatory subunit T3 Length=409 Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 19/129 (14%) Query 1 EKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIG 60 E+++ + +P ++G +EL N EG ++ ++ + + ++ Sbjct 67 EELKRIQSVPLVIGQFMELI-NANEG------------------IVASTAGSSYVVRILS 107 Query 61 LVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQEL 120 + + LK G V +++ S+ V+D LP E D+ ++ +++ E+P YSD+GG+D Q QE+ Sbjct 108 TLNRELLKTGCSVALHRHSHSVVDILPPEADSTIQTLQMQEKPDVTYSDIGGMDIQKQEI 167 Query 121 IEAIVLPMT 129 EA+ LP+T Sbjct 168 REAVELPLT 176 > tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062 26S proteasome regulatory subunit T2 Length=441 Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ +S ++ ++ V+ D L+PG V ++ + ++ L E D + M+V++ P Sbjct 123 IVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILNDEVDPLISVMKVEKAPL 182 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E Y+D+GGL+KQIQE+ EA+ P+TH Sbjct 183 ETYADIGGLEKQIQEVKEAVEFPLTH 208 > sce:YDR394W RPT3, YNT1, YTA2; One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; substrate of N-acetyltransferase B; K03063 26S proteasome regulatory subunit T3 Length=428 Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ ++T + + ++ ++ + LKP V +++ S ++D LP + D+ + M +E+P Sbjct 109 IVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPD 168 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 Y+DVGGLD Q QE+ EA+ LP+ Sbjct 169 VTYADVGGLDMQKQEIREAVELPLVQ 194 > bbo:BBOV_IV009290 23.m06008; 26S protease regulatory subunit 4; K03062 26S proteasome regulatory subunit T2 Length=438 Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ +S ++ ++ V+ L+PG V ++ + V+ L D V M+V+ P Sbjct 120 IVTSSMGPEYYVNILSFVDKTLLEPGCSVLLHNKTNSVVGILLDAIDPLVSLMKVERAPL 179 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E YSD+GGL+ QIQE+ EA+ LP+TH Sbjct 180 ESYSDIGGLEDQIQEIKEAVELPLTH 205 > ath:AT1G53750 RPT1A; RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ATPase; K03061 26S proteasome regulatory subunit T1 Length=426 Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 7/78 (8%) Query 58 VIGLVEADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGG 112 V+GL D++ P D+ VGV+++ Y + LP + D V M V+E+P Y+DVGG Sbjct 115 VVGL--GDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172 Query 113 LDKQIQELIEAIVLPMTH 130 +QI+++ E + LPM H Sbjct 173 CKEQIEKMREVVELPMLH 190 > dre:393941 psmc2, MGC63995, zgc:63995; proteasome (prosome, macropain) 26S subunit, ATPase 2; K03061 26S proteasome regulatory subunit T1 Length=433 Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Query 64 ADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118 +DQ+ P D+ VGV+++ Y + LP + D V M+V+E+P YSDVGG +QI+ Sbjct 126 SDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIE 185 Query 119 ELIEAIVLPMTH 130 +L E + P+ H Sbjct 186 KLREVVETPLLH 197 > xla:399327 psmc2, xMSS1; proteasome (prosome, macropain) 26S subunit, ATPase, 2; K03061 26S proteasome regulatory subunit T1 Length=433 Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Query 64 ADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118 +DQ+ P D+ VGV+++ Y + LP + D V M+V+E+P YSDVGG +QI+ Sbjct 126 SDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIE 185 Query 119 ELIEAIVLPMTH 130 +L E + P+ H Sbjct 186 KLREVVETPLLH 197 > mmu:19181 Psmc2; proteasome (prosome, macropain) 26S subunit, ATPase 2; K03061 26S proteasome regulatory subunit T1 Length=475 Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Query 64 ADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118 +DQ+ P D+ VGV+++ Y + LP + D V M+V+E+P YSDVGG +QI+ Sbjct 168 SDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIE 227 Query 119 ELIEAIVLPMTH 130 +L E + P+ H Sbjct 228 KLREVVETPLLH 239 > cel:C10G11.8 ATPase; hypothetical protein; K03062 26S proteasome regulatory subunit T2 Length=438 Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 23/127 (18%) Query 10 PYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIGLVEADQLKP 69 P + V ELFD+E+ +V+ +R+ ++P++ +V+ D L+ Sbjct 96 PTTLARVHELFDDEKH-----------------AVVVVEGSRREWYVPILSIVDKDLLRL 138 Query 70 GDLVGVNKDSYL------VLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQELIEA 123 LV V ++ L + D+ +V++ P E + D+GG + QIQEL E+ Sbjct 139 NALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKES 198 Query 124 IVLPMTH 130 + LP+TH Sbjct 199 VELPLTH 205 > cel:C52E4.4 rpt-1; proteasome Regulatory Particle, ATPase-like family member (rpt-1); K03061 26S proteasome regulatory subunit T1 Length=435 Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 5/72 (6%) Query 64 ADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQ 118 AD + P D+ VGV+++ Y + LPA+ D V M+V+E+P YSDVGG QI+ Sbjct 128 ADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIE 187 Query 119 ELIEAIVLPMTH 130 +L E + P+ H Sbjct 188 KLREVVETPLLH 199 > ath:AT1G53780 ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding / peptidyl-prolyl cis-trans isomerase; K03061 26S proteasome regulatory subunit T1 Length=598 Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 7/78 (8%) Query 58 VIGLVEADQLKPGDL-----VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGG 112 V+GL D+ P D+ VGV++ Y + LP + D V M V+E+P YSD+GG Sbjct 286 VVGL--GDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGG 343 Query 113 LDKQIQELIEAIVLPMTH 130 +QI+++ E + LPM H Sbjct 344 CKEQIEKIREVVELPMLH 361 > tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S proteasome regulatory subunit T2 Length=415 Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 0/86 (0%) Query 45 VIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPT 104 ++ +S ++ ++ V+ + L+PG V ++ + ++ L + D V M+V++ P Sbjct 97 IVTSSIGPEYYVNILSFVDKELLEPGCSVLLHNKTNSIVGILLDDVDPLVSVMKVEKAPL 156 Query 105 EEYSDVGGLDKQIQELIEAIVLPMTH 130 E Y D+GGL++QIQE+ EA+ LP+T Sbjct 157 ESYDDIGGLEEQIQEIKEAVELPLTR 182 > ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03066 26S proteasome regulatory subunit T6 Length=419 Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 0/69 (0%) Query 62 VEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQELI 121 ++ +L P V + DSY++ LP++ D V M+V++ P Y +GGLD+QI+E+ Sbjct 115 IDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIK 174 Query 122 EAIVLPMTH 130 E I LP+ H Sbjct 175 EVIELPIKH 183 > tgo:TGME49_077500 26S proteasome AAA-ATPase subunit RPT1, putative ; K03061 26S proteasome regulatory subunit T1 Length=476 Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 12/118 (10%) Query 21 DNEEEGEDDGAATDIDLQRKG-----KCIVIKTSTRQTVFLPVIGL---VEADQLKPGDL 72 +N E GE GA T G K I+ + +Q V+GL V A ++ G Sbjct 124 ENGENGESGGAGTTAPPPFGGDDEEPKYII---NVKQIAKF-VVGLGEKVAAMDIEEGMR 179 Query 73 VGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQELIEAIVLPMTH 130 VGV+++ Y + LP + D V M V+E+P Y+DVGG +Q+++L E + LP+ H Sbjct 180 VGVDRNKYKIQIPLPPKIDPTVTMMTVEEKPDVTYNDVGGAKEQLEKLREVLELPLLH 237 Lambda K H 0.314 0.137 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2039374804 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40