bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_5027_orf1
Length=100
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_010690 40s ribosomal protein S6, putative ; K02991 ... 143 1e-34
tpv:TP02_0487 40S ribosomal protein S6; K02991 small subunit r... 133 2e-31
bbo:BBOV_III004660 17.m07417; 40S ribosomal protein S6; K02991... 132 4e-31
pfa:PF13_0228 40S ribosomal protein S6, putative; K02991 small... 128 5e-30
cpv:cgd2_4260 40S ribosomal protein S6 ; K02991 small subunit ... 121 4e-28
mmu:20104 Rps6, MGC102571, MGC103209; ribosomal protein S6; K0... 112 4e-25
mmu:667739 Gm13654, OTTMUSG00000013244; predicted gene 13654 112 4e-25
hsa:6194 RPS6; ribosomal protein S6; K02991 small subunit ribo... 112 4e-25
dre:445028 rps6, wu:fa92e06, wu:fb64g06; zgc:92237; K02991 sma... 111 7e-25
cel:Y71A12B.1 rps-6; Ribosomal Protein, Small subunit family m... 108 3e-24
xla:379863 rps6-b, MGC53553, rps6b; ribosomal protein S6; K029... 108 6e-24
xla:380281 rps6-a, MGC64259, rps6, rps6a; ribosomal protein S6... 107 7e-24
mmu:639593 40S ribosomal protein S6-like 106 2e-23
ath:AT5G10360 EMB3010 (embryo defective 3010); structural cons... 105 4e-23
sce:YPL090C RPS6A; Rps6ap; K02991 small subunit ribosomal prot... 102 4e-22
sce:YBR181C RPS6B, LPG18, RPS101, RPS102; Protein component of... 102 4e-22
bbo:BBOV_III008750 17.m07764; tRNA synthetases class I (W and ... 30.0 1.7
hsa:8633 UNC5C, UNC5H3; unc-5 homolog C (C. elegans); K07521 n... 29.6 2.5
mmu:22253 Unc5c, 6030473H24, AI047720, B130051O18Rik, Unc5h3, ... 28.9 4.0
xla:379833 gldc, MGC53992; glycine dehydrogenase (decarboxylat... 28.5 5.6
tgo:TGME49_040890 phosphofructokinase, putative (EC:2.7.1.90);... 27.7 8.4
> tgo:TGME49_010690 40s ribosomal protein S6, putative ; K02991
small subunit ribosomal protein S6e
Length=256
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 71/76 (93%), Gaps = 0/76 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLN+ANP G+QKTVEVDDEKKLLPFFE+RMGAEV GDS+G+EFKGY+FRI+GGNDKQG
Sbjct 1 MKLNLANPQAGMQKTVEVDDEKKLLPFFEKRMGAEVAGDSIGDEFKGYIFRISGGNDKQG 60
Query 81 FPMMQGILANHRVRLC 96
FPMMQG+L NHRVRL
Sbjct 61 FPMMQGVLVNHRVRLL 76
> tpv:TP02_0487 40S ribosomal protein S6; K02991 small subunit
ribosomal protein S6e
Length=218
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 69/75 (92%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLN+ANP G+QKT+E+DDEK+LLPFFERRMG EVPGDS+G+EFKGY+F+I+GGNDKQG
Sbjct 1 MKLNLANPFTGMQKTMEIDDEKRLLPFFERRMGTEVPGDSIGDEFKGYVFKISGGNDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPMMQG+L RVRL
Sbjct 61 FPMMQGVLTPTRVRL 75
> bbo:BBOV_III004660 17.m07417; 40S ribosomal protein S6; K02991
small subunit ribosomal protein S6e
Length=230
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 68/75 (90%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLN+ANP +Q+T+E+DDEKKLLPF+E+RMG EVPGDSLGEEFKGY+F+I+GGNDKQG
Sbjct 1 MKLNLANPFTNMQRTMEIDDEKKLLPFYEKRMGTEVPGDSLGEEFKGYVFKISGGNDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPMMQG+L RVRL
Sbjct 61 FPMMQGVLTTSRVRL 75
> pfa:PF13_0228 40S ribosomal protein S6, putative; K02991 small
subunit ribosomal protein S6e
Length=306
Score = 128 bits (321), Expect = 5e-30, Method: Composition-based stats.
Identities = 55/75 (73%), Positives = 67/75 (89%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLNI+NP +QK++E+DDEKKLLPF E+R+G VPGDS+GEEF GY+FRITGGNDKQG
Sbjct 1 MKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNAVPGDSIGEEFTGYVFRITGGNDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPM+QG+L N+RVRL
Sbjct 61 FPMIQGVLTNNRVRL 75
> cpv:cgd2_4260 40S ribosomal protein S6 ; K02991 small subunit
ribosomal protein S6e
Length=225
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 66/76 (86%), Gaps = 0/76 (0%)
Query 20 RMKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQ 79
+MKLNIANP GLQK +E+DDEK LLPFFERR+G+E+ LGEEFKGY+ +ITGGNDKQ
Sbjct 4 KMKLNIANPTTGLQKCIEIDDEKLLLPFFERRIGSELDCSFLGEEFKGYILKITGGNDKQ 63
Query 80 GFPMMQGILANHRVRL 95
GFPMMQG+L ++RVRL
Sbjct 64 GFPMMQGVLTSNRVRL 79
> mmu:20104 Rps6, MGC102571, MGC103209; ribosomal protein S6;
K02991 small subunit ribosomal protein S6e
Length=249
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLNI+ PA G QK +EVDDE+KL F+E+RM EV D+LGEE+KGY+ RI+GGNDKQG
Sbjct 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPM QG+L + RVRL
Sbjct 61 FPMKQGVLTHGRVRL 75
> mmu:667739 Gm13654, OTTMUSG00000013244; predicted gene 13654
Length=249
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLNI+ PA G QK +EVDDE+KL F+E+RM EV D+LGEE+KGY+ RI+GGNDKQG
Sbjct 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPM QG+L + RVRL
Sbjct 61 FPMKQGVLTHGRVRL 75
> hsa:6194 RPS6; ribosomal protein S6; K02991 small subunit ribosomal
protein S6e
Length=249
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLNI+ PA G QK +EVDDE+KL F+E+RM EV D+LGEE+KGY+ RI+GGNDKQG
Sbjct 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPM QG+L + RVRL
Sbjct 61 FPMKQGVLTHGRVRL 75
> dre:445028 rps6, wu:fa92e06, wu:fb64g06; zgc:92237; K02991 small
subunit ribosomal protein S6e
Length=249
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLNI+ PA G QK +EVDDE+KL F+E+RM EV DSLG+E+KGY+ RI+GGNDKQG
Sbjct 1 MKLNISFPATGCQKLIEVDDERKLRIFYEKRMATEVAADSLGDEWKGYVVRISGGNDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPM QG+L + RVRL
Sbjct 61 FPMKQGVLTHGRVRL 75
> cel:Y71A12B.1 rps-6; Ribosomal Protein, Small subunit family
member (rps-6); K02991 small subunit ribosomal protein S6e
Length=246
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 60/75 (80%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
M+LN A PA GLQK+ EVD+EKKL FFE+RM EV D+LG+E+KGY+ RI GGNDKQG
Sbjct 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPM QGIL N RVRL
Sbjct 61 FPMKQGILTNGRVRL 75
> xla:379863 rps6-b, MGC53553, rps6b; ribosomal protein S6; K02991
small subunit ribosomal protein S6e
Length=249
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 60/75 (80%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLNI+ PA G QK +EV+DE+KL F+E+RM EV D LG+E+KGY+ RI+GGNDKQG
Sbjct 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVSADPLGDEWKGYVVRISGGNDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPM QG+L + RVRL
Sbjct 61 FPMKQGVLTHGRVRL 75
> xla:380281 rps6-a, MGC64259, rps6, rps6a; ribosomal protein
S6; K02991 small subunit ribosomal protein S6e
Length=249
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 60/75 (80%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLNI+ PA G QK +EV+DE+KL F+E+RM EV D LG+E+KGY+ RI+GGNDKQG
Sbjct 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPM QG+L + RVRL
Sbjct 61 FPMKQGVLTHGRVRL 75
> mmu:639593 40S ribosomal protein S6-like
Length=249
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLNI+ P G QK +EVDDE+KL F+E+RM EV D+LGEE+KGY+ RI+GGNDKQG
Sbjct 1 MKLNISFPTTGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPM G L + RVRL
Sbjct 61 FPMKHGALTHGRVRL 75
> ath:AT5G10360 EMB3010 (embryo defective 3010); structural constituent
of ribosome; K02991 small subunit ribosomal protein
S6e
Length=249
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 59/75 (78%), Gaps = 0/75 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MK N+ANP G QK +E+DD++KL FF++R+ EV GD+LGEEFKGY+F+I GG DKQG
Sbjct 1 MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query 81 FPMMQGILANHRVRL 95
FPM QG+L RVRL
Sbjct 61 FPMKQGVLTPGRVRL 75
> sce:YPL090C RPS6A; Rps6ap; K02991 small subunit ribosomal protein
S6e
Length=236
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 61/76 (80%), Gaps = 0/76 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLNI+ P G QKT E+DDE ++ FF++R+G EV G+++G+EFKGY+F+I+GGNDKQG
Sbjct 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60
Query 81 FPMMQGILANHRVRLC 96
FPM QG+L R++L
Sbjct 61 FPMKQGVLLPTRIKLL 76
> sce:YBR181C RPS6B, LPG18, RPS101, RPS102; Protein component
of the small (40S) ribosomal subunit; identical to Rps6Ap and
has similarity to rat S6 ribosomal protein; K02991 small subunit
ribosomal protein S6e
Length=236
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 61/76 (80%), Gaps = 0/76 (0%)
Query 21 MKLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYLFRITGGNDKQG 80
MKLNI+ P G QKT E+DDE ++ FF++R+G EV G+++G+EFKGY+F+I+GGNDKQG
Sbjct 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60
Query 81 FPMMQGILANHRVRLC 96
FPM QG+L R++L
Sbjct 61 FPMKQGVLLPTRIKLL 76
> bbo:BBOV_III008750 17.m07764; tRNA synthetases class I (W and
Y) family protein; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Length=388
Score = 30.0 bits (66), Expect = 1.7, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
Query 22 KLNIANPACGLQKTVEVDDEKKLLPFFERRMGAEVPGD 59
K+ +A + + EV + ++LL FF GA +PGD
Sbjct 276 KIKVAKTSTDDTSSTEVTNLRRLLKFFSGDSGANIPGD 313
> hsa:8633 UNC5C, UNC5H3; unc-5 homolog C (C. elegans); K07521
netrin receptor unc-5
Length=931
Score = 29.6 bits (65), Expect = 2.5, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query 9 VGGSGANALSARMKLNIANPAC--GLQKTVEV---DDEKKLLP---FFERRMGAEVPGDS 60
VG S A + R+KL I P C L+ ++ V DD + L ER+MG ++ +
Sbjct 670 VGHSTTKAAAKRLKLAIFGPLCCSSLEYSIRVYCLDDTQDALKEILHLERQMGGQLLEEP 729
Query 61 LGEEFKG 67
FKG
Sbjct 730 KALHFKG 736
> mmu:22253 Unc5c, 6030473H24, AI047720, B130051O18Rik, Unc5h3,
rcm; unc-5 homolog C (C. elegans); K07521 netrin receptor
unc-5
Length=931
Score = 28.9 bits (63), Expect = 4.0, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query 9 VGGSGANALSARMKLNIANPAC--GLQKTVEV---DDEKKLLP---FFERRMGAEVPGDS 60
VG S A + R+KL I P C L+ ++ V DD + L ER+MG ++ +
Sbjct 670 VGQSTTKAAAKRLKLAIFGPLCCSSLEYSIRVYCLDDTQDALKEVLQLERQMGGQLLEEP 729
Query 61 LGEEFKG 67
FKG
Sbjct 730 KALHFKG 736
> xla:379833 gldc, MGC53992; glycine dehydrogenase (decarboxylating)
(EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2]
Length=1024
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 0/39 (0%)
Query 31 GLQKTVEVDDEKKLLPFFERRMGAEVPGDSLGEEFKGYL 69
L +TV+ D LL F AE+ +S+GEE KG L
Sbjct 476 SLDETVKEKDLDDLLWVFGCESSAELVAESMGEEIKGIL 514
> tgo:TGME49_040890 phosphofructokinase, putative (EC:2.7.1.90);
K00850 6-phosphofructokinase [EC:2.7.1.11]
Length=1399
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Query 5 GIYAVGGSGANALSARMK--LNIANPAC---GLQKTVEVDDEKKLLPFFERRMGAEVPGD 59
G+ VGG G+N+ +A + + + P+C G+ KT++ D + P E G +
Sbjct 323 GLVLVGGDGSNSNAALLAEFMQVHLPSCAVVGVPKTIDGDLKS---PLIEASFGFDTAAK 379
Query 60 SLGEEFKGYLFRITGGNDKQGFPMMQGILANHRVRLCS 97
+ E I F + G A+H V C+
Sbjct 380 TYSELIGNLCTDINSSQTTYHFVRVMGRSASHLVLECA 417
Lambda K H
0.323 0.142 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2041372988
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40