bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_5089_orf2 Length=80 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_088680 endonuclease V, putative (EC:3.1.21.2); K107... 105 3e-23 cpv:cgd1_310 AP endonuclease of the TIM barrel fold, possible ... 92.0 4e-19 tpv:TP02_0334 apurinic/apyrimidinic endonuclease; K10771 AP en... 82.0 4e-16 pfa:PF13_0176 apn1; apurinic/apyrimidinic endonuclease Apn1 (E... 81.6 5e-16 eco:b2159 nfo, ECK2152, JW2146; endonuclease IV with intrinsic... 76.3 2e-14 bbo:BBOV_III005900 17.m07523; apurinic endonuclease (APN1) fam... 73.2 2e-13 dre:558198 APurinic/apyrimidinic endoNuclease family member (a... 63.5 2e-10 cel:T05H10.2 apn-1; APurinic/apyrimidinic endoNuclease family ... 59.7 2e-09 sce:YKL114C APN1; Apn1p (EC:4.2.99.18); K10771 AP endonuclease... 57.4 1e-08 cel:C56C10.9 hypothetical protein 27.7 8.9 > tgo:TGME49_088680 endonuclease V, putative (EC:3.1.21.2); K10771 AP endonuclease 1 [EC:4.2.99.18] Length=667 Score = 105 bits (263), Expect = 3e-23, Method: Composition-based stats. Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 2/75 (2%) Query 1 GYKFLRGMHLNDSKSELSSGLDRHELLGKGHLGLAPFKYIMQHQTRFKDMPLILETPDPT 60 G K+L+ MH+NDSK+ L SGLDRHE LGKG LG+APFK+IMQH T FKDMPL+LETPD Sbjct 588 GMKYLKAMHINDSKAPLGSGLDRHEHLGKGTLGMAPFKFIMQHPTWFKDMPLVLETPDVD 647 Query 61 EG--TIWKKEIKQMY 73 +W+KE + MY Sbjct 648 NSGPAMWRKETEMMY 662 > cpv:cgd1_310 AP endonuclease of the TIM barrel fold, possible bacterial horizontal transfer ; K10771 AP endonuclease 1 [EC:4.2.99.18] Length=364 Score = 92.0 bits (227), Expect = 4e-19, Method: Composition-based stats. Identities = 43/74 (58%), Positives = 58/74 (78%), Gaps = 2/74 (2%) Query 1 GYKFLRGMHLNDSKSELSSGLDRHELLGKGHLGLAPFKYIMQHQTRFKDMPLILETPDP- 59 G K+L+ MHLNDSK + +SGLDRHE LGKG++G+ FK+IM + +RF D+PLILETPDP Sbjct 285 GLKYLKAMHLNDSKGQFNSGLDRHENLGKGNIGMECFKFIM-NDSRFNDIPLILETPDPN 343 Query 60 TEGTIWKKEIKQMY 73 + ++KKEI +Y Sbjct 344 NDDKVYKKEIAILY 357 > tpv:TP02_0334 apurinic/apyrimidinic endonuclease; K10771 AP endonuclease 1 [EC:4.2.99.18] Length=422 Score = 82.0 bits (201), Expect = 4e-16, Method: Composition-based stats. Identities = 42/75 (56%), Positives = 56/75 (74%), Gaps = 4/75 (5%) Query 1 GYKFLRGMHLNDSKSELSSGLDRHELLGKGHLGLAPFKYIMQHQTRFKDMPLILETPDPT 60 G K+LR +HLNDSKS+L SGLDRHE +GKG L F++I+ + FK+MP+ILETP P Sbjct 346 GLKYLRAVHLNDSKSDLGSGLDRHENIGKGKLSEQTFRFIV-NSPYFKNMPIILETPVP- 403 Query 61 EGT--IWKKEIKQMY 73 EG ++K+E+K MY Sbjct 404 EGNEEVYKQEVKLMY 418 > pfa:PF13_0176 apn1; apurinic/apyrimidinic endonuclease Apn1 (EC:4.2.99.18); K10771 AP endonuclease 1 [EC:4.2.99.18] Length=597 Score = 81.6 bits (200), Expect = 5e-16, Method: Composition-based stats. Identities = 40/72 (55%), Positives = 57/72 (79%), Gaps = 2/72 (2%) Query 3 KFLRGMHLNDSKSELSSGLDRHELLGKGHLGLAPFKYIMQHQTRFKDMPLILETPDPT-E 61 K+L+ +HLNDSKS++ SGLDRHE +GKG L + FKYIM+ + FK++P+ILETPD T + Sbjct 521 KYLKAVHLNDSKSDIGSGLDRHENIGKGKLTMDTFKYIMKSKY-FKNIPIILETPDITND 579 Query 62 GTIWKKEIKQMY 73 +I+K EI+ +Y Sbjct 580 ESIYKYEIQNLY 591 > eco:b2159 nfo, ECK2152, JW2146; endonuclease IV with intrinsic 3'-5' exonuclease activity (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] Length=285 Score = 76.3 bits (186), Expect = 2e-14, Method: Composition-based stats. Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 4/69 (5%) Query 1 GYKFLRGMHLNDSKSELSSGLDRHELLGKGHLGLAPFKYIMQHQTRFKDMPLILETPDPT 60 G+K+LRGMHLND+KS S +DRH LG+G++G F++IMQ RF +PLILET +P Sbjct 208 GFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQ-DDRFDGIPLILETINP- 265 Query 61 EGTIWKKEI 69 IW +EI Sbjct 266 --DIWAEEI 272 > bbo:BBOV_III005900 17.m07523; apurinic endonuclease (APN1) family protein; K10771 AP endonuclease 1 [EC:4.2.99.18] Length=374 Score = 73.2 bits (178), Expect = 2e-13, Method: Composition-based stats. Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 2/74 (2%) Query 1 GYKFLRGMHLNDSKSELSSGLDRHELLGKGHLGLAPFKYIMQHQTRFKDMPLILETPD-P 59 G K+L +HLND KS+L SGLDRHE +G G L F++I + F++MP+ILETPD Sbjct 290 GLKYLVAVHLNDCKSDLGSGLDRHENIGIGKLTRETFEFI-ANSGYFRNMPIILETPDIH 348 Query 60 TEGTIWKKEIKQMY 73 + TI+K+E+K MY Sbjct 349 GDETIYKQEVKVMY 362 > dre:558198 APurinic/apyrimidinic endoNuclease family member (apn-1)-like Length=296 Score = 63.5 bits (153), Expect = 2e-10, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 2/73 (2%) Query 1 GYKFLRGMHLNDSKSELSSGLDRHELLGKGHLGLAPFKYIMQHQTRFKDMPLILETPDPT 60 G +LR +HLNDSK +L S LDRHE +G G +G+ F+ I+ ++ R ++PLILETP Sbjct 217 GLHYLRAVHLNDSKGKLGSHLDRHEDIGHGQIGITAFREIV-NEPRLDNIPLILETPG-R 274 Query 61 EGTIWKKEIKQMY 73 +G + ++I+ +Y Sbjct 275 QGFEYAEQIELLY 287 > cel:T05H10.2 apn-1; APurinic/apyrimidinic endoNuclease family member (apn-1); K10771 AP endonuclease 1 [EC:4.2.99.18] Length=396 Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%) Query 1 GYKFLRGMHLNDSKSELSSGLDRHELLGKGHLGLAPFKYIMQHQTRFKDMPLILETPD 58 G+ +L+ +H+NDSK ++ S LDRHE +G+G +G A F+ +M + R +P+ILETP+ Sbjct 324 GWNYLKAIHINDSKGDVGSKLDRHEHIGQGKIGKAAFELLM-NDNRLDGIPMILETPE 380 > sce:YKL114C APN1; Apn1p (EC:4.2.99.18); K10771 AP endonuclease 1 [EC:4.2.99.18] Length=367 Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 4/73 (5%) Query 1 GYKFLRGMHLNDSKSELSSGLDRHELLGKGHLGLAPFKYIMQHQTRFKDMPLILETP-DP 59 G+K+L +HLNDSK+ L + D HE LG+G+LG+ F+ I H + +P++LETP + Sbjct 221 GFKYLSAVHLNDSKAPLGANRDLHERLGQGYLGIDVFRMIA-HSEYLQGIPIVLETPYEN 279 Query 60 TEGTIWKKEIKQM 72 EG + EIK M Sbjct 280 DEG--YGNEIKLM 290 > cel:C56C10.9 hypothetical protein Length=320 Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 0/63 (0%) Query 15 SELSSGLDRHELLGKGHLGLAPFKYIMQHQTRFKDMPLILETPDPTEGTIWKKEIKQMYL 74 S LS L+R + L H+ L P + + +F+ + DP++ + IK+M+ Sbjct 13 SALSIPLNRSDFLENDHVELMPLEKDGELNDKFRQEMIFSHNLDPSDSKQLSESIKEMFK 72 Query 75 GRD 77 D Sbjct 73 KTD 75 Lambda K H 0.319 0.139 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2058492688 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40