bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_5845_orf2 Length=107 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_008580 DNA ligase 1 precursor, putative (EC:3.2.1.1... 102 2e-22 pfa:MAL13P1.22 PfLigI; DNA ligase I (EC:6.5.1.1); K10747 DNA l... 93.2 2e-19 cpv:cgd3_3820 DNA LIGASE I ; K10747 DNA ligase 1 [EC:6.5.1.1] 76.6 2e-14 bbo:BBOV_IV001520 21.m02964; DNA ligase I (EC:6.5.1.1); K10747... 70.9 9e-13 tpv:TP03_0549 DNA ligase I (EC:6.5.1.1); K10747 DNA ligase 1 [... 66.2 2e-11 dre:556995 lig1, wu:fc54a11; si:dkeyp-35b8.5 (EC:6.5.1.1); K10... 52.4 3e-07 xla:397978 lig1, ligI; ligase I, DNA, ATP-dependent (EC:6.5.1.... 50.4 1e-06 ath:AT1G08130 ATLIG1; ATLIG1 (ARABIDOPSIS THALIANA DNA LIGASE ... 45.4 4e-05 mmu:16881 Lig1, AL033288, LigI; ligase I, DNA, ATP-dependent (... 44.7 7e-05 ath:AT1G66730 ATP dependent DNA ligase family protein 44.3 9e-05 hsa:3978 LIG1, MGC117397, MGC130025; ligase I, DNA, ATP-depend... 43.1 2e-04 cel:C29A12.3 lig-1; LIGase family member (lig-1); K10747 DNA l... 39.7 0.002 ath:AT1G49250 ATP dependent DNA ligase family protein; K10747 ... 34.3 0.089 tgo:TGME49_118440 DEAH-box RNA/DNA helicase, putative (EC:3.4.... 30.0 1.7 ath:AT4G22030 F-box family protein 29.3 3.5 > tgo:TGME49_008580 DNA ligase 1 precursor, putative (EC:3.2.1.11 6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] Length=1112 Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 43/83 (51%), Positives = 62/83 (74%), Gaps = 0/83 (0%) Query 23 FSVLTEALGRIEGLKNSGSGSSKKQTLILANAFRILVFYCPQALAAAVYFCLNRTAPDFL 82 F L A +IE +K SG+GS+KKQT++L N FR+L+FY P+ L A+Y CLN+ APD+L Sbjct 415 FEALVNAFDKIEQMKASGTGSNKKQTVVLTNLFRLLLFYAPKTLHKAIYICLNKVAPDYL 474 Query 83 DAEAGVGDSILFKAVAETYGVSD 105 E GVG+S++ +A+AETYG ++ Sbjct 475 GQEVGVGESLILRAMAETYGRTE 497 > pfa:MAL13P1.22 PfLigI; DNA ligase I (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] Length=912 Score = 93.2 bits (230), Expect = 2e-19, Method: Composition-based stats. Identities = 40/85 (47%), Positives = 61/85 (71%), Gaps = 0/85 (0%) Query 23 FSVLTEALGRIEGLKNSGSGSSKKQTLILANAFRILVFYCPQALAAAVYFCLNRTAPDFL 82 F+ LT A +IE LK SG+GS K ++IL+N FR+L++Y P L AVY LN+ APD+L Sbjct 177 FTFLTNAFNQIEELKGSGTGSKKNVSIILSNIFRVLIYYSPNDLIPAVYITLNKVAPDYL 236 Query 83 DAEAGVGDSILFKAVAETYGVSDNS 107 + EAGVG++++ K ++E Y +++S Sbjct 237 NVEAGVGEALILKTMSEAYSRTESS 261 > cpv:cgd3_3820 DNA LIGASE I ; K10747 DNA ligase 1 [EC:6.5.1.1] Length=825 Score = 76.6 bits (187), Expect = 2e-14, Method: Composition-based stats. Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 3/85 (3%) Query 23 FSVLTEALGRIEGLKNSGSGSSKKQTLILANAFRILVFYCPQALAAAVYFCLNRTAPDFL 82 FSVLT+A RIE LK SGSGS K +ILAN FR+++ + P L AVY C+N+ APD+ Sbjct 166 FSVLTDAFSRIEQLKGSGSGSKKGCIVILANLFRLIIHHNPSDLIDAVYICMNKVAPDYE 225 Query 83 DAEAGVGDSILFKAVAETYGVSDNS 107 E+GVGDSIL K ++E+ SD S Sbjct 226 GKESGVGDSILIKCISES---SDKS 247 > bbo:BBOV_IV001520 21.m02964; DNA ligase I (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] Length=773 Score = 70.9 bits (172), Expect = 9e-13, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 0/85 (0%) Query 23 FSVLTEALGRIEGLKNSGSGSSKKQTLILANAFRILVFYCPQALAAAVYFCLNRTAPDFL 82 F+ L E L ++E SG+GS K +L+N FR+L+++ P + A+Y LNR + ++ Sbjct 150 FNFLAEILQKVEDAFGSGTGSRKYVFTLLSNFFRVLIYHQPSDVIPAMYLMLNRISAEYE 209 Query 83 DAEAGVGDSILFKAVAETYGVSDNS 107 E GVGD++L KA+A++YG S+ + Sbjct 210 GEEFGVGDTMLIKAMAQSYGKSEKA 234 > tpv:TP03_0549 DNA ligase I (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] Length=858 Score = 66.2 bits (160), Expect = 2e-11, Method: Composition-based stats. Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 0/85 (0%) Query 23 FSVLTEALGRIEGLKNSGSGSSKKQTLILANAFRILVFYCPQALAAAVYFCLNRTAPDFL 82 FS+++ L + + + +G GS K +LAN +R+L++Y P + Y LNR P++ Sbjct 215 FSLVSSVLQKSDDIFCTGKGSRKSVLTLLANFYRVLIYYNPPDVIPVTYLLLNRICPEYE 274 Query 83 DAEAGVGDSILFKAVAETYGVSDNS 107 + E GVGDS++ K+++E Y S+ + Sbjct 275 NIEIGVGDSLIIKSMSEAYSKSEKN 299 > dre:556995 lig1, wu:fc54a11; si:dkeyp-35b8.5 (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] Length=1058 Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%) Query 9 KQRQRGQRLGLGRSFSVLTEALGRIEGLKNSGSGSSKKQTLILANAFRILVFYCPQALAA 68 K+ Q+ L + R+F + E GR++ ++ L+N R ++ P L Sbjct 424 KKGQKVPYLAVARTFEKIEEDSGRLKNIET------------LSNFLRSVILLSPDDLLC 471 Query 69 AVYFCLNRTAPDFLDAEAGVGDSILFKAVAETYG 102 VY CLN+ P + E G+G+++L KAVA+ G Sbjct 472 CVYLCLNQLGPAYQGLELGIGETVLMKAVAQATG 505 > xla:397978 lig1, ligI; ligase I, DNA, ATP-dependent (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] Length=1070 Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 12/91 (13%) Query 12 QRGQRLGLGRSFSVLTEALGRIEGLKNSGSGSSKKQTLILANAFRILVFYCPQALAAAVY 71 Q+ L + R+F + E R++ ++ L+N R ++ P+ L +Y Sbjct 438 QKVPYLAVARTFERIEEESARLKNVET------------LSNFLRSVIALTPEDLLPCIY 485 Query 72 FCLNRTAPDFLDAEAGVGDSILFKAVAETYG 102 CLNR P + E G+G++IL KAVA+ G Sbjct 486 LCLNRLGPAYEGLELGIGETILMKAVAQATG 516 > ath:AT1G08130 ATLIG1; ATLIG1 (ARABIDOPSIS THALIANA DNA LIGASE 1); ATP binding / DNA binding / DNA ligase (ATP); K10747 DNA ligase 1 [EC:6.5.1.1] Length=790 Score = 45.4 bits (106), Expect = 4e-05, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 0/59 (0%) Query 48 TLILANAFRILVFYCPQALAAAVYFCLNRTAPDFLDAEAGVGDSILFKAVAETYGVSDN 106 T IL N R ++ P+ L A VY N AP E G+G+S + KA++E +G +++ Sbjct 197 TDILCNMLRTVIATTPEDLVATVYLSANEIAPAHEGVELGIGESTIIKAISEAFGRTED 255 > mmu:16881 Lig1, AL033288, LigI; ligase I, DNA, ATP-dependent (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] Length=932 Score = 44.7 bits (104), Expect = 7e-05, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 12/94 (12%) Query 9 KQRQRGQRLGLGRSFSVLTEALGRIEGLKNSGSGSSKKQTLILANAFRILVFYCPQALAA 68 K Q+ L + R+F + E R+ K L+N R +V P L Sbjct 296 KHGQKVPFLAVARTFEKIEEVSARL------------KMVETLSNLLRSVVALSPPDLLP 343 Query 69 AVYFCLNRTAPDFLDAEAGVGDSILFKAVAETYG 102 +Y LNR P E GVGD +L KAVA+ G Sbjct 344 VLYLSLNRLGPPQQGLELGVGDGVLLKAVAQATG 377 > ath:AT1G66730 ATP dependent DNA ligase family protein Length=1417 Score = 44.3 bits (103), Expect = 9e-05, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 12/99 (12%) Query 9 KQRQRGQRLGLGRSFSVLTEALGRIEGLKNSGSGSSKKQTLILANAFRILVFYCPQALAA 68 ++ Q + L R+F+ + G+I+ + +L N FR L P+ + Sbjct 760 REGQPAPYIHLVRTFASVESEKGKIKAMS------------MLCNMFRSLFALSPEDVLP 807 Query 69 AVYFCLNRTAPDFLDAEAGVGDSILFKAVAETYGVSDNS 107 AVY C N+ A D + E +G S++ A+ E G+S ++ Sbjct 808 AVYLCTNKIAADHENIELNIGGSLISSALEEACGISRST 846 > hsa:3978 LIG1, MGC117397, MGC130025; ligase I, DNA, ATP-dependent (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] Length=919 Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 12/94 (12%) Query 9 KQRQRGQRLGLGRSFSVLTEALGRIEGLKNSGSGSSKKQTLILANAFRILVFYCPQALAA 68 K Q+ L + R+F + E R+ ++ L+N R +V P L Sbjct 282 KPGQKVPYLAVARTFEKIEEVSARLRMVET------------LSNLLRSVVALSPPDLLP 329 Query 69 AVYFCLNRTAPDFLDAEAGVGDSILFKAVAETYG 102 +Y LN P E GVGD +L KAVA+ G Sbjct 330 VLYLSLNHLGPPQQGLELGVGDGVLLKAVAQATG 363 > cel:C29A12.3 lig-1; LIGase family member (lig-1); K10747 DNA ligase 1 [EC:6.5.1.1] Length=773 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 0/63 (0%) Query 43 SSKKQTLILANAFRILVFYCPQALAAAVYFCLNRTAPDFLDAEAGVGDSILFKAVAETYG 102 S KK+ LA F ++ + P L A VY +N+ P + E GV ++ L KAVA+ G Sbjct 35 SGKKKVDELAQFFTKVLDFSPDDLTACVYMSVNQLGPSYEGLELGVAENSLIKAVAKATG 94 Query 103 VSD 105 ++ Sbjct 95 RTE 97 > ath:AT1G49250 ATP dependent DNA ligase family protein; K10747 DNA ligase 1 [EC:6.5.1.1] Length=657 Score = 34.3 bits (77), Expect = 0.089, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query 48 TLILANAFRILVFYCPQALAAAVYFCLNRTAPDFLDAEAGVGD-SILFKAVAETYGVSDN 106 T IL N R ++ P L VY N AP + G+G S + KA++E +G +++ Sbjct 65 THILCNMLRTVIATTPDDLLPTVYLAANEIAPAHEGIKLGMGKGSYIIKAISEAFGRTES 124 > tgo:TGME49_118440 DEAH-box RNA/DNA helicase, putative (EC:3.4.22.44 3.6.1.15) Length=2234 Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Query 26 LTEALGRIEGLKNSGSGSSKKQT---LILANAFRILVFYCPQALAAAVYFCLNRTAPDFL 82 L E LGR G + SG + K+T + F ++ P ALAA + L+ L Sbjct 367 LEEPLGRSVGYRISGDAVTSKETKVCFVTTGYFLQVLINQPHALAALTHIILDEVHERDL 426 Query 83 DAE 85 DA+ Sbjct 427 DAD 429 > ath:AT4G22030 F-box family protein Length=626 Score = 29.3 bits (64), Expect = 3.5, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Query 7 RKKQRQRG---QRLGLGRSFSVLTEALGRIEGLKNSGSGSSKKQTLIL 51 R++Q++RG Q L R +VL E + R+E KN G + +L+L Sbjct 70 RQRQKKRGCDDQVLQRSRLMAVLEEVIDRVEMHKNIGEQRNNWNSLLL 117 Lambda K H 0.322 0.137 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2007980300 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40