bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_6305_orf1 Length=130 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_080610 signal recognition particle protein, putativ... 78.2 6e-15 cpv:cgd8_5260 Srp101p GTpase. signal recognition particle rece... 50.1 2e-06 hsa:6734 SRPR, DP, MGC17355, MGC3650, MGC9571, Sralpha; signal... 42.7 3e-04 mmu:67398 Srpr, 1300011P19Rik, D11Mgi27; signal recognition pa... 40.8 0.001 sce:YDR292C SRP101; Signal recognition particle (SRP) receptor... 36.2 0.024 dre:569063 srpr, id:ibd1064, wu:fd12f02; signal recognition pa... 35.0 0.053 bbo:BBOV_III007430 17.m07650; 30S ribosomal protein S15 30.8 1.1 xla:444667 samd4b, MGC84256; sterile alpha motif domain contai... 30.4 1.3 bbo:BBOV_III005280 17.m07472; SRP54-type protein, GTPase domai... 30.4 1.4 pfa:PF13_0350 signal recognition particle receptor alpha subun... 30.0 1.6 xla:444108 eapp; E2F-associated phosphoprotein 29.3 3.4 dre:406806 cand1, fb78a05, wu:fb78a05, zgc:55729; cullin-assoc... 29.3 3.4 tgo:TGME49_022700 hypothetical protein 28.1 7.5 ath:AT4G30600 signal recognition particle receptor alpha subun... 28.1 8.0 ath:AT4G30990 binding; K14772 U3 small nucleolar RNA-associate... 27.7 9.9 > tgo:TGME49_080610 signal recognition particle protein, putative (EC:2.7.4.9); K13431 signal recognition particle receptor subunit alpha Length=564 Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 51/109 (46%), Positives = 61/109 (55%), Gaps = 7/109 (6%) Query 29 YSKKTG-----NGDEAAHAIERKTYGADSDSQSSEEETEAAAAAAA--ATAEGSWLSFLP 81 +SKK+ NGD+A +ER TYGAD + SE+E E A A W L Sbjct 199 FSKKSPHGELPNGDDAVARMERATYGADEALEESEDEEELLEVEMNEEAAAASGWFRSLT 258 Query 82 KSLQKTAGNKVLDESDIEEVLPYFRQHFSAKNVAEEVTDLLLLSVKKNL 130 LQ GNK+L +DI EVLP FR H + KNVAEEV DLLL SV+ L Sbjct 259 SKLQSFTGNKLLTNADIAEVLPAFRAHLAEKNVAEEVIDLLLHSVQSRL 307 > cpv:cgd8_5260 Srp101p GTpase. signal recognition particle receptor alpha subunit ; K13431 signal recognition particle receptor subunit alpha Length=548 Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 5/117 (4%) Query 10 AAGYWTENKVTKKSMEALDYSKKTGNGDEAAHAIERKTYGADSDSQSSEEETEAAAAAAA 69 A+ W KVTKK+ME LDYSK++GN +E+ + Y + D S +E E A Sbjct 181 ASRQWGNQKVTKKNMEMLDYSKRSGNSEESQSKLS--FYERNEDEVSDDEIEEINQEKKA 238 Query 70 ATAEGSWLSFLPKSLQKTAGNKVLDESDIEEVLPYFRQHFSAKNVAEEVTDLLLLSV 126 + W +FL N L +E+ L + KNVA E+ ++ SV Sbjct 239 VSY---WSNFLSSQFGILNNNTTLTAEMVEKPLQKLKSQLVEKNVASEIAQDIIDSV 292 > hsa:6734 SRPR, DP, MGC17355, MGC3650, MGC9571, Sralpha; signal recognition particle receptor (docking protein); K13431 signal recognition particle receptor subunit alpha Length=610 Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 10/115 (8%) Query 25 EALDYSKKTGNG------DEAAHAIERKTYGA---DSDSQSSEEETEAAAAAAAATAEGS 75 E LDYS T NG E + I G D D SS++E A + + +G+ Sbjct 229 EVLDYSTPTTNGTPEAALSEDINLIRGTGSGGQLQDLDCSSSDDEGAAQNSTKPSATKGT 288 Query 76 WLSFLPKSLQKTAGNKVLDESDIEEVLPYFRQHFSAKNVAEEVTDLLLLSVKKNL 130 L + L+ G+K L D+E VL R H AKNVA ++ L SV L Sbjct 289 -LGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKL 342 > mmu:67398 Srpr, 1300011P19Rik, D11Mgi27; signal recognition particle receptor ('docking protein'); K13431 signal recognition particle receptor subunit alpha Length=636 Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 49/113 (43%), Gaps = 7/113 (6%) Query 25 EALDYSKKTGNGD-EAAHA----IERKTY--GADSDSQSSEEETEAAAAAAAATAEGSWL 77 E LDYS T NG EAA + + R T G D S + E A +A L Sbjct 256 EVLDYSTPTTNGTPEAALSEDINLIRGTGPGGQLQDLDCSSSDDEGATQNTKPSATKGTL 315 Query 78 SFLPKSLQKTAGNKVLDESDIEEVLPYFRQHFSAKNVAEEVTDLLLLSVKKNL 130 + L+ G+K L D+E VL R H AKNVA ++ L SV L Sbjct 316 GGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKL 368 > sce:YDR292C SRP101; Signal recognition particle (SRP) receptor - alpha subunit; contain GTPase domains; involved in SRP-dependent protein targeting; interacts with Srp102p; K13431 signal recognition particle receptor subunit alpha Length=621 Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Query 62 EAAAAAAAATAEGSWLSFLPKSLQKTAGNKVLDESDIEEVLPYFRQHFSAKNVAEEVTDL 121 EA + +TA G FL K + GNK ++ESD++ VL Q KNVA E D Sbjct 282 EAKNSGYVSTAFG----FLQKHV---LGNKTINESDLKSVLEKLTQQLITKNVAPEAADY 334 Query 122 LLLSVKKNL 130 L V +L Sbjct 335 LTQQVSHDL 343 > dre:569063 srpr, id:ibd1064, wu:fd12f02; signal recognition particle receptor (docking protein); K13431 signal recognition particle receptor subunit alpha Length=650 Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 0/47 (0%) Query 84 LQKTAGNKVLDESDIEEVLPYFRQHFSAKNVAEEVTDLLLLSVKKNL 130 L+ G+K L + D+E VL + H AKNVA E+ L SV K L Sbjct 336 LKGLVGSKNLTQEDMEPVLDKMKDHLIAKNVAAEIASQLCDSVAKKL 382 > bbo:BBOV_III007430 17.m07650; 30S ribosomal protein S15 Length=299 Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 0/64 (0%) Query 56 SSEEETEAAAAAAAATAEGSWLSFLPKSLQKTAGNKVLDESDIEEVLPYFRQHFSAKNVA 115 +SE++T++ ++ T+ S+ SFLPK +K + + DI++ P FR+ + + V Sbjct 65 TSEDQTQSEDSSKTETSTESFDSFLPKKKKKREPKNPVVKRDIDKFEPLFRKIPALRYVK 124 Query 116 EEVT 119 +EVT Sbjct 125 KEVT 128 > xla:444667 samd4b, MGC84256; sterile alpha motif domain containing 4B Length=676 Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query 54 SQSSEEETEAAAAAAAATAEGSWLSFLP---KSLQKTAGNKVLDESDIEEVLPYFRQHFS 110 S SE+ E +A T +GS + +P KSL+ + + EE++ QH Sbjct 279 SSGSEQTEEVSAGRNTFTEDGSGMKDVPTWLKSLRLHKYASLFAQMSYEEMMTLTEQHLE 338 Query 111 AKNVAEEVTDLLLLSVKK 128 +NV + + LS++K Sbjct 339 CQNVTKGARHKIALSIQK 356 > bbo:BBOV_III005280 17.m07472; SRP54-type protein, GTPase domain containing protein; K13431 signal recognition particle receptor subunit alpha Length=566 Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 0/56 (0%) Query 75 SWLSFLPKSLQKTAGNKVLDESDIEEVLPYFRQHFSAKNVAEEVTDLLLLSVKKNL 130 S L + + K AGN VL IEE L + + + KNVA +++ ++ S+ L Sbjct 254 SVLDTFSQMVLKYAGNMVLTPEVIEEPLKELKLNLNTKNVANDISTMICDSISAGL 309 > pfa:PF13_0350 signal recognition particle receptor alpha subunit, putative; K13431 signal recognition particle receptor subunit alpha Length=576 Score = 30.0 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 0/41 (0%) Query 90 NKVLDESDIEEVLPYFRQHFSAKNVAEEVTDLLLLSVKKNL 130 N ++E DIE++L + +KNVA + D L+ +K+NL Sbjct 280 NSKIEEEDIEKILHEIKNKLLSKNVAIGICDTLIDRMKENL 320 > xla:444108 eapp; E2F-associated phosphoprotein Length=293 Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Query 34 GNGDEAAHAIERKTYGADSDSQSSEE---ETEAAAAAAAATAEGSWLSFLP 81 G D+ I R+ +S+S S +E E E+ ++A T EGSW S +P Sbjct 37 GTPDQKRKMI-RECLTGESESSSDDEFEKEMESELSSAMKTMEGSWQSIVP 86 > dre:406806 cand1, fb78a05, wu:fb78a05, zgc:55729; cullin-associated and neddylation-dissociated 1 Length=1230 Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 0/46 (0%) Query 44 ERKTYGADSDSQSSEEETEAAAAAAAATAEGSWLSFLPKSLQKTAG 89 E KT D+ S +SEE AA+ A + + G+ +LP LQ+ +G Sbjct 856 ELKTVILDAFSSASEEVKSAASYALGSISVGNLPEYLPFVLQEISG 901 > tgo:TGME49_022700 hypothetical protein Length=648 Score = 28.1 bits (61), Expect = 7.5, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 0/30 (0%) Query 43 IERKTYGADSDSQSSEEETEAAAAAAAATA 72 +ERK+ G D DSQ +E++ E+ A TA Sbjct 244 VERKSDGRDVDSQQAEQQCESPAEPGDTTA 273 > ath:AT4G30600 signal recognition particle receptor alpha subunit family protein; K13431 signal recognition particle receptor subunit alpha Length=634 Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Query 76 WLSFLPKSLQKTAGNKVLDESDIEEVLPYFRQHFSAKNVAEEVTDLLLLSVKKNL 130 W S + Q G L+ +D+ L ++ KNVAEE+ + L SV+ +L Sbjct 329 WFSSV---FQSITGKANLERTDLGPALKALKERLMTKNVAEEIAEKLCESVEASL 380 > ath:AT4G30990 binding; K14772 U3 small nucleolar RNA-associated protein 20 Length=2570 Score = 27.7 bits (60), Expect = 9.9, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 0/47 (0%) Query 76 WLSFLPKSLQKTAGNKVLDESDIEEVLPYFRQHFSAKNVAEEVTDLL 122 W S L +L+ ++ SD+EE L + + + S + V V D+L Sbjct 559 WQSLLGTTLRSCYKMTGINHSDLEEALSFAKDYKSCEQVLSPVADVL 605 Lambda K H 0.303 0.119 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2039374804 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40