bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_6454_orf1 Length=190 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_023390 sec63 domain-containing DEAD/DEAH box helica... 347 2e-95 dre:799690 fb63a09; wu:fb63a09 (EC:3.6.4.13); K12854 pre-mRNA-... 243 3e-64 hsa:23020 SNRNP200, ASCC3L1, BRR2, FLJ11521, HELIC2, RP33, U5-... 241 9e-64 mmu:320632 Snrnp200, A330064G03Rik, Ascc3l1, BC011390, HELIC2,... 241 1e-63 hsa:652147 u5 small nuclear ribonucleoprotein 200 kDa helicase... 239 4e-63 ath:AT1G20960 emb1507 (embryo defective 1507); ATP binding / A... 224 1e-58 cel:Y46G5A.4 hypothetical protein; K12854 pre-mRNA-splicing he... 222 7e-58 ath:AT2G42270 U5 small nuclear ribonucleoprotein helicase, put... 219 4e-57 xla:100158290 snrnp200, ascc3l1; small nuclear ribonucleoprote... 207 2e-53 ath:AT5G61140 DEAD box RNA helicase, putative; K01529 [EC:3.6... 183 2e-46 hsa:10973 ASCC3, ASC1p200, DJ467N11.1, HELIC1, MGC26074, RNAH,... 177 2e-44 pfa:PFD1060w U5 small nuclear ribonucleoprotein-specific prote... 174 2e-43 mmu:77987 Ascc3, ASC1p200, B630009I04Rik, BC023451, D430001L07... 173 3e-43 bbo:BBOV_III000950 17.m07111; sec63 domain containing protein ... 157 2e-38 cel:Y54E2A.6 hypothetical protein; K01529 [EC:3.6.1.-] 155 6e-38 dre:100332599 mutagen-sensitive 308-like 152 5e-37 sce:YGR271W SLH1; Putative RNA helicase related to Ski2p, invo... 144 2e-34 tgo:TGME49_049810 activating signal cointegrator 1 complex sub... 135 8e-32 tpv:TP03_0747 ATP-dependent RNA helicase; K12854 pre-mRNA-spli... 125 1e-28 sce:YER172C BRR2, PRP44, RSS1, SLT22, SNU246; Brr2p (EC:3.6.1.... 115 1e-25 pfa:PF14_0370 DEAD/DEAH box helicase, putative; K01509 adenosi... 113 3e-25 mmu:330149 Hfm1, A330009G12Rik, Gm1046, Sec63d1; HFM1, ATP-dep... 113 5e-25 bbo:BBOV_I001530 19.m02171; helicase 111 1e-24 tpv:TP01_0582 RNA helicase 107 2e-23 hsa:164045 HFM1, FLJ36760, FLJ39011, MER3, MGC163397, RP11-539... 107 3e-23 dre:557052 hfm1, si:ch211-83f14.5; HFM1, ATP-dependent DNA hel... 100 3e-21 cpv:cgd2_2770 U5 small nuclear ribonucleoprotein 200kDA helica... 99.8 5e-21 cpv:cgd5_2960 U5snrp Brr2 SFII RNA helicase (sec63 and the sec... 99.4 7e-21 ath:AT3G27730 RCK; RCK (ROCK-N-ROLLERS); ATP binding / ATP-dep... 92.8 6e-19 cpv:cgd5_2970 hypothetical protein 91.7 1e-18 sce:YGL251C HFM1, MER3; Hfm1p (EC:3.6.1.-); K01529 [EC:3.6.1.-] 88.6 1e-17 dre:559653 skiv2l, fb70b07, wu:fb70b07; superkiller viralicidi... 46.2 6e-05 hsa:6499 SKIV2L, 170A, DDX13, HLP, SKI2, SKI2W, SKIV2; superki... 45.4 1e-04 mmu:108077 Skiv2l, 4930534J06Rik, AW214248, Ddx13, SKI, Ski2w;... 45.4 1e-04 dre:100331276 superkiller viralicidic activity 2-like; K12599 ... 45.1 1e-04 ath:AT1G59760 ATP-dependent RNA helicase, putative; K12598 ATP... 42.7 7e-04 sce:YLR398C SKI2; Ski complex component and putative RNA helic... 42.4 0.001 cel:W08D2.7 mtr-4; yeast MTR (mRNA TRansport) homolog family m... 41.6 0.002 ath:AT1G70070 EMB25; EMB25 (EMBRYO DEFECTIVE 25); ATP-dependen... 41.2 0.002 hsa:23517 SKIV2L2, Dob1, KIAA0052, MGC142069, Mtr4, fSAP118; s... 40.0 0.004 tpv:TP02_0517 hypothetical protein; K12598 ATP-dependent RNA h... 40.0 0.005 ath:AT3G46960 ATP binding / ATP-dependent helicase/ helicase/ ... 40.0 0.005 bbo:BBOV_II002350 18.m06191; helicase with zinc finger motif p... 39.7 0.006 tpv:TP04_0364 hypothetical protein; K12599 antiviral helicase ... 39.7 0.006 cpv:cgd8_2520 Mtr4p like SKI family SFII helicase ; K12598 ATP... 38.9 0.012 mmu:72198 Skiv2l2, 2610528A15Rik, mKIAA0052; superkiller viral... 38.5 0.013 dre:406795 skiv2l2, wu:fd11a05, zgc:63838; superkiller viralic... 38.1 0.016 bbo:BBOV_II005660 18.m06470; DSHCT (NUC185) domain containing ... 38.1 0.019 pfa:PFF0100w ATP-dependent RNA Helicase, putative (EC:3.6.1.-)... 37.7 0.025 tgo:TGME49_085660 DEAD/DEAH box helicase domain-containing pro... 37.4 0.031 > tgo:TGME49_023390 sec63 domain-containing DEAD/DEAH box helicase, putative ; K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2198 Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 157/190 (82%), Positives = 179/190 (94%), Gaps = 0/190 (0%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 VVV AEE AWGLQM +HLVVIVDTK+FTENGYEDY +ADVLQMLG ATRP IDKHG+ VL Sbjct 1708 VVVVAEECAWGLQMYAHLVVIVDTKKFTENGYEDYTVADVLQMLGHATRPSIDKHGFAVL 1767 Query 61 LCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYRRL 120 CPSSKREFYKKF+FEPLP+ESQLEQ+L DH+NAEVVLKTIE+KQDAVDWLTW+FLYRRL Sbjct 1768 FCPSSKREFYKKFVFEPLPVESQLEQNLVDHINAEVVLKTIENKQDAVDWLTWTFLYRRL 1827 Query 121 SKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFYYV 180 +KNPNYYGLQG SHQHLSD+LSELVES+VH+LEQAQC++E+NE++L+PLNLGL++AFYYV Sbjct 1828 AKNPNYYGLQGVSHQHLSDYLSELVESSVHTLEQAQCVSEQNEVDLQPLNLGLVAAFYYV 1887 Query 181 KVATIELFNR 190 KV TIELFNR Sbjct 1888 KVNTIELFNR 1897 Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 114/196 (58%), Gaps = 6/196 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V+ AWG+ + +H V+I T+ + + + + DVLQM+GRA RP D G+ Sbjct 862 VLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGAWAELSPMDVLQMMGRAGRPQYDTSGHA 921 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +L+ S+ ++Y + LPIESQ+ L D +NAEVVL ++ S++DAV+WL +++LY Sbjct 922 ILITQHSELQYYLSLNNQQLPIESQMLSCLPDMLNAEVVLGSVRSREDAVNWLGYTYLYV 981 Query 119 RLSKNPNYYGLQGTSHQH---LSDFLSELVESAVHSLEQAQCLAEKNEL-ELEPLNLGLI 174 R+ KNP+ YG+ + L LV+SA+ L++ + + ++ LG + Sbjct 982 RMLKNPSLYGVPPEDAERDKLLEQHCVNLVDSALKILDKNFLIKYDRRMGAIQVTALGRV 1041 Query 175 SAFYYVKVATIELFNR 190 ++ YY+K TI ++N+ Sbjct 1042 ASHYYIKYPTIAVYNQ 1057 > dre:799690 fb63a09; wu:fb63a09 (EC:3.6.4.13); K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2134 Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 106/191 (55%), Positives = 151/191 (79%), Gaps = 2/191 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTE--NGYEDYPIADVLQMLGRATRPGIDKHGYV 58 VVVA+ WG +S+HLV+++DT+ + + Y DYPI DVLQM+G+A RP D G Sbjct 1639 VVVASRSLCWGTNISAHLVIVMDTQYYNGKIHAYVDYPIYDVLQMVGKANRPLQDDEGRC 1698 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V++C SK++F+KKF++EPLP+ES L+ L DH NAE+V KT+E+KQDAVD+LTW+FLYR Sbjct 1699 VIMCQGSKKDFFKKFLYEPLPVESHLDHCLHDHFNAEIVTKTVENKQDAVDYLTWTFLYR 1758 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFY 178 R+++NPNYY LQG SH+HLSD LSELVE+ + LEQ++C++ ++E+++ PLNLG+I+A+Y Sbjct 1759 RMTQNPNYYNLQGMSHRHLSDHLSELVENTLQDLEQSKCISIEDEMDVAPLNLGMIAAYY 1818 Query 179 YVKVATIELFN 189 Y+ TIELF+ Sbjct 1819 YINYTTIELFS 1829 Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 114/199 (57%), Gaps = 12/199 (6%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT-ENG-YEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V+ AWG+ + +H V+I T+ ++ E G + + D+LQMLGRA RP D G Sbjct 805 VLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDSKGEG 864 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +L+ + ++Y + + LPIESQ+ L D +NAE+VL +++ +DAV+WL +++LY Sbjct 865 ILITSHGELQYYLSLLNQQLPIESQMVGKLADMLNAEIVLGNVQNAKDAVNWLGYTYLYV 924 Query 119 RLSKNPNYYGLQGTSHQHLS-DFLSE-----LVESAVHSLEQAQCLA-EKNELELEPLNL 171 R+ +NP YG+ SH S D L E LV +A LE+ + +K + +L Sbjct 925 RMLRNPTLYGV---SHDDRSIDPLLERRRMDLVHTAATVLEKNNLVKYDKRSGSFQVTDL 981 Query 172 GLISAFYYVKVATIELFNR 190 G I++ +Y+ +I +N+ Sbjct 982 GRIASHFYITHESIMTYNQ 1000 > hsa:23020 SNRNP200, ASCC3L1, BRR2, FLJ11521, HELIC2, RP33, U5-200KD; small nuclear ribonucleoprotein 200kDa (U5) (EC:3.6.4.13); K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2136 Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 106/191 (55%), Positives = 150/191 (78%), Gaps = 2/191 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTE--NGYEDYPIADVLQMLGRATRPGIDKHGYV 58 VVVA+ WG+ +++HLV+I+DT+ + + Y DYPI DVLQM+G A RP D G Sbjct 1643 VVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRC 1702 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V++C SK++F+KKF++EPLP+ES L+ + DH NAE+V KTIE+KQDAVD+LTW+FLYR Sbjct 1703 VIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYR 1762 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFY 178 R+++NPNYY LQG SH+HLSD LSELVE + LEQ++C++ ++E+++ PLNLG+I+A+Y Sbjct 1763 RMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYY 1822 Query 179 YVKVATIELFN 189 Y+ TIELF+ Sbjct 1823 YINYTTIELFS 1833 Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 112/202 (55%), Gaps = 18/202 (8%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT-ENG-YEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V+ AWG+ + +H V+I T+ ++ E G + + D+LQMLGRA RP D G Sbjct 808 VLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEG 867 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +L+ + ++Y + + LPIESQ+ L D +NAE+VL +++ +DAV+WL +++LY Sbjct 868 ILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYI 927 Query 119 RLSKNPNYYGLQGTSHQHLSD--FLSELVESAVHSLEQAQCLAEKNEL--------ELEP 168 R+ ++P YG+ SH L L + VH+ A + +KN L + Sbjct 928 RMLRSPTLYGI---SHDDLKGDPLLDQRRLDLVHT---AALMLDKNNLVKYDKKTGNFQV 981 Query 169 LNLGLISAFYYVKVATIELFNR 190 LG I++ YY+ T++ +N+ Sbjct 982 TELGRIASHYYITNDTVQTYNQ 1003 > mmu:320632 Snrnp200, A330064G03Rik, Ascc3l1, BC011390, HELIC2, KIAA0788, U5-200-KD, U5-200KD; small nuclear ribonucleoprotein 200 (U5) (EC:3.6.4.13); K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2136 Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 106/191 (55%), Positives = 150/191 (78%), Gaps = 2/191 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTE--NGYEDYPIADVLQMLGRATRPGIDKHGYV 58 VVVA+ WG+ +++HLV+I+DT+ + + Y DYPI DVLQM+G A RP D G Sbjct 1643 VVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRC 1702 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V++C SK++F+KKF++EPLP+ES L+ + DH NAE+V KTIE+KQDAVD+LTW+FLYR Sbjct 1703 VIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYR 1762 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFY 178 R+++NPNYY LQG SH+HLSD LSELVE + LEQ++C++ ++E+++ PLNLG+I+A+Y Sbjct 1763 RMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYY 1822 Query 179 YVKVATIELFN 189 Y+ TIELF+ Sbjct 1823 YINYTTIELFS 1833 Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 112/202 (55%), Gaps = 18/202 (8%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT-ENG-YEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V+ AWG+ + +H V+I T+ ++ E G + + D+LQMLGRA RP D G Sbjct 808 VLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEG 867 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +L+ + ++Y + + LPIESQ+ L D +NAE+VL +++ +DAV+WL +++LY Sbjct 868 ILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYI 927 Query 119 RLSKNPNYYGLQGTSHQHLSD--FLSELVESAVHSLEQAQCLAEKNEL--------ELEP 168 R+ ++P YG+ SH L L + VH+ A + +KN L + Sbjct 928 RMLRSPTLYGI---SHDDLKGDPLLDQRRLDLVHT---AALMLDKNNLVKYDKKTGNFQV 981 Query 169 LNLGLISAFYYVKVATIELFNR 190 LG I++ YY+ T++ +N+ Sbjct 982 TELGRIASHYYITNDTVQTYNQ 1003 > hsa:652147 u5 small nuclear ribonucleoprotein 200 kDa helicase-like Length=1700 Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 106/191 (55%), Positives = 149/191 (78%), Gaps = 2/191 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTE--NGYEDYPIADVLQMLGRATRPGIDKHGYV 58 VVVA+ WG+ +++HLV+I+DT + + Y DYPI DVLQM+G A RP D G Sbjct 1207 VVVASRSLCWGMNVAAHLVIIMDTLYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRC 1266 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V++C SK++F+KKF++EPLP+ES L+ + DH NAE+V KTIE+KQDAVD+LTW+FLYR Sbjct 1267 VIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYR 1326 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFY 178 R+++NPNYY LQG SH+HLSD LSELVE + LEQ++C++ ++E+++ PLNLG+I+A+Y Sbjct 1327 RMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYY 1386 Query 179 YVKVATIELFN 189 Y+ TIELF+ Sbjct 1387 YINYTTIELFS 1397 Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 112/202 (55%), Gaps = 18/202 (8%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT-ENG-YEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V+ AWG+ + +H V+I T+ ++ E G + + D+LQMLGRA RP D G Sbjct 372 VLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEG 431 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +L+ + ++Y + + LPIESQ+ L D +NAE+VL +++ +DAV+WL +++LY Sbjct 432 ILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYI 491 Query 119 RLSKNPNYYGLQGTSHQHLSD--FLSELVESAVHSLEQAQCLAEKNEL--------ELEP 168 R+ ++P YG+ SH L L + VH+ A + +KN L + Sbjct 492 RMLRSPTLYGI---SHDDLKGDPLLDQRRLDLVHT---AALMLDKNNLVKYDKKTGNFQV 545 Query 169 LNLGLISAFYYVKVATIELFNR 190 LG I++ YY+ T++ +N+ Sbjct 546 TELGRIASHYYITNDTVQTYNQ 567 > ath:AT1G20960 emb1507 (embryo defective 1507); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / nucleoside-triphosphatase/ nucleotide binding; K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2171 Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 99/191 (51%), Positives = 143/191 (74%), Gaps = 2/191 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT--ENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V V + WG +++HLVV++ T+ + EN + DYP+ D+LQM+GRA+RP +D G Sbjct 1670 VCVMSSSLCWGTPLTAHLVVVMGTQYYDGRENSHSDYPVPDLLQMMGRASRPLLDNAGKC 1729 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V+ C + ++E+YKKF++E P+ESQL+ L D+ NAEVV IE+KQDAVD+LTW+F+YR Sbjct 1730 VIFCHAPRKEYYKKFLYEAFPVESQLQHFLHDNFNAEVVAGVIENKQDAVDYLTWTFMYR 1789 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFY 178 RL +NPNYY LQG SH+HLSD LSELVE+ + LE ++C+ ++E+EL PLNLG+I+++Y Sbjct 1790 RLPQNPNYYNLQGVSHRHLSDHLSELVENTLSDLEASKCIEVEDEMELSPLNLGMIASYY 1849 Query 179 YVKVATIELFN 189 Y+ TIE F+ Sbjct 1850 YISYTTIERFS 1860 Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 112/195 (57%), Gaps = 6/195 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT--ENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V+ AWG+ + +H V+I T+ + + + + DV+QMLGRA RP D+HG Sbjct 832 VLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGAWMELSPLDVMQMLGRAGRPQYDQHGEG 891 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +++ S+ ++Y + E LPIESQ L D +NAE+VL T+++ ++A WL +++LY Sbjct 892 IIITGYSELQYYLSLMNEQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYLYI 951 Query 119 RLSKNPNYYGLQGTSHQH---LSDFLSELVESAVHSLEQAQCLA-EKNELELEPLNLGLI 174 R+ +NP YGL + L + ++L+ SA L++ + ++ + +LG I Sbjct 952 RMVRNPTLYGLAPDALAKDVVLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRI 1011 Query 175 SAFYYVKVATIELFN 189 +++YY+ TI +N Sbjct 1012 ASYYYITHGTIATYN 1026 > cel:Y46G5A.4 hypothetical protein; K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2145 Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 102/193 (52%), Positives = 145/193 (75%), Gaps = 6/193 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENG----YEDYPIADVLQMLGRATRPGIDKHG 56 V V + ++MS++LVV++DT+ + NG YEDYPIAD+L M+G A RP +D Sbjct 1642 VCVVPRGMCYQIEMSAYLVVVMDTQFY--NGKYHVYEDYPIADMLHMVGLANRPILDSDA 1699 Query 57 YVVLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFL 116 V++C +SKR +YKKF+ +PLP+ES L+ L DH NAE+V KTIE+KQDA+D+LTW+ L Sbjct 1700 KCVVMCQTSKRAYYKKFLCDPLPVESHLDHCLHDHFNAEIVTKTIENKQDAIDYLTWTLL 1759 Query 117 YRRLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISA 176 YRR+++NPNYY LQGT+H+HLSD LSELVE + LE ++C+A K+E++ LNLG+I++ Sbjct 1760 YRRMTQNPNYYNLQGTTHRHLSDALSELVELTLKDLENSKCIAVKDEMDTVSLNLGMIAS 1819 Query 177 FYYVKVATIELFN 189 +YY+ TIELF+ Sbjct 1820 YYYISYQTIELFS 1832 Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 111/196 (56%), Gaps = 6/196 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT-ENG-YEDYPIADVLQMLGRATRPGIDKHGYV 58 V+ + AWG+ + +H V+I T+ + E G + + D++QMLGRA RP D G Sbjct 801 VLFSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWTELGALDIMQMLGRAGRPQYDDRGEG 860 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +L+ S+ ++Y + + LP+ESQ+ L D +NAEVVL T+ S +A +WL ++FL+ Sbjct 861 ILITNHSELQYYLSLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFV 920 Query 119 RLSKNPNYYGL---QGTSHQHLSDFLSELVESAVHSLEQAQCLA-EKNELELEPLNLGLI 174 R+ KNP YG+ Q + L ++L+ +A L++A + +K ++ LG I Sbjct 921 RMLKNPTLYGITHEQARADPLLEQRRADLIHTACVLLDKAGLIKYDKRSGIIQATELGRI 980 Query 175 SAFYYVKVATIELFNR 190 ++ +Y +++ +N+ Sbjct 981 ASHFYCTYESMQTYNK 996 > ath:AT2G42270 U5 small nuclear ribonucleoprotein helicase, putative Length=2172 Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 99/191 (51%), Positives = 140/191 (73%), Gaps = 2/191 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT--ENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V V + WG + +HLVV++ T + EN + DYPI+++LQM+GR +RP +D G Sbjct 1671 VCVMSSSLCWGTPLKAHLVVVMGTHFYDGRENSHSDYPISNLLQMMGRGSRPLLDDAGKC 1730 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V+ C + ++E+YKKF++E LP+ES L+ L D+ NAEVV + IE+KQDAVD+LTWSF+YR Sbjct 1731 VIFCHAPRKEYYKKFLYEALPVESHLQHFLHDNFNAEVVARVIENKQDAVDYLTWSFMYR 1790 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFY 178 RL +NPNYY L G SH+HLSD LSELVE+ + LE ++C+ NEL+L PLNLG+I+++Y Sbjct 1791 RLPQNPNYYNLLGVSHRHLSDHLSELVENTLSDLEVSKCIEIDNELDLSPLNLGMIASYY 1850 Query 179 YVKVATIELFN 189 Y+ TIE F+ Sbjct 1851 YINYTTIERFS 1861 Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 114/196 (58%), Gaps = 8/196 (4%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT-ENG--YEDYPIADVLQMLGRATRPGIDKHGY 57 V+++ AWG+ + +H V+I T+ + E G E P+ DV+QM+GRA RP D+ G Sbjct 833 VLISTATLAWGVNLPAHTVIIKGTQVYNPERGEWMELSPL-DVMQMIGRAGRPQYDQQGE 891 Query 58 VVLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLY 117 +++ SK ++Y + + E LPIESQ L D +NAE+VL TI++ ++A WL +++LY Sbjct 892 GIIITGYSKLQYYLRLMNEQLPIESQFISKLADQLNAEIVLGTIQNAREACHWLGYTYLY 951 Query 118 RRLSKNPNYYGLQGTSHQH---LSDFLSELVESAVHSLEQAQCLA-EKNELELEPLNLGL 173 R+ +NP YG+ + L + ++L+ SA L++ + ++ + +LG Sbjct 952 VRMVRNPTLYGVSPDALAKDLLLEERRADLIHSAATILDKNNLIKYDRKSGHFQVTDLGR 1011 Query 174 ISAFYYVKVATIELFN 189 I+++YY+ TI +N Sbjct 1012 IASYYYISHGTIAAYN 1027 > xla:100158290 snrnp200, ascc3l1; small nuclear ribonucleoprotein 200kDa (U5); K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=457 Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 89/151 (58%), Positives = 123/151 (81%), Gaps = 0/151 (0%) Query 39 DVLQMLGRATRPGIDKHGYVVLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVL 98 DVLQM+G A RP D G V++C SK++F+KKF++EPLP+ES L+ + DH NAE+V Sbjct 4 DVLQMVGYANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVT 63 Query 99 KTIESKQDAVDWLTWSFLYRRLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCL 158 KTIE+KQDAVD+LTW+FLYRR+++NPNYY LQG SH+HLSD LSELVE + LEQ++C+ Sbjct 64 KTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGVSHRHLSDHLSELVEHTLSDLEQSKCI 123 Query 159 AEKNELELEPLNLGLISAFYYVKVATIELFN 189 + ++E+++ PLNLG+I+A+YY+ TIELF+ Sbjct 124 SIEDEMDVAPLNLGMIAAYYYINYTTIELFS 154 > ath:AT5G61140 DEAD box RNA helicase, putative; K01529 [EC:3.6.1.-] Length=2146 Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 86/191 (45%), Positives = 127/191 (66%), Gaps = 3/191 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V+ AWG+ + +HLV+I T+ F Y D+P+ ++LQM+GRA RP D+HG Sbjct 1660 VLVSTSTLAWGVNLPAHLVIIKGTEYFDGKTKRYVDFPLTEILQMMGRAGRPQFDQHGKA 1719 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V+L K+ FYKKF++EP P+ES L++ L DH NAE+V TI +K+DAV +LTW++L+R Sbjct 1720 VILVHEPKKSFYKKFLYEPFPVESSLKEKLHDHFNAEIVSGTIGNKEDAVHYLTWTYLFR 1779 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFY 178 RL NP YYGL+GT + + +LS LV++ LE + CL + NE +EP LG I++ Y Sbjct 1780 RLMANPAYYGLEGTQDETICSYLSRLVQTTFEDLEDSGCL-KVNEDSVEPTMLGTIASQY 1838 Query 179 YVKVATIELFN 189 Y+ T+ +F Sbjct 1839 YLCYMTVSMFG 1849 Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 109/195 (55%), Gaps = 6/195 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V AWG+ + +H VVI T+ + G++D + DV+Q+ GRA RP DK G Sbjct 835 VLVCTATLAWGVNLPAHTVVIKGTQLYDAKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEG 894 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +++ K +Y + + LPIESQ L+D++NAEVVL T+ + ++A WL +++L Sbjct 895 IIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVVLGTVTNVKEACAWLGYTYLSI 954 Query 119 RLSKNPNYYGL---QGTSHQHLSDFLSELVESAVHSLEQAQCLA-EKNELELEPLNLGLI 174 R+ NP YG+ + + LS LV A SL++A+ + ++ LG + Sbjct 955 RMKLNPLAYGIGWEEIIADPSLSLKQRALVADAARSLDKAKMMRFDEKSGNFYCTELGRV 1014 Query 175 SAFYYVKVATIELFN 189 ++ +Y++ +++E +N Sbjct 1015 ASHFYIQYSSVETYN 1029 > hsa:10973 ASCC3, ASC1p200, DJ467N11.1, HELIC1, MGC26074, RNAH, dJ121G13.4; activating signal cointegrator 1 complex subunit 3; K01529 [EC:3.6.1.-] Length=2202 Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 86/192 (44%), Positives = 125/192 (65%), Gaps = 5/192 (2%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V++A AWG+ +HLV+I T+ + Y D+PI DVLQM+GRA RP D G Sbjct 1642 VLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKA 1701 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V+L K++FYKKF++EP P+ES L L DH+NAE+ TI SKQDA+D++TW++ +R Sbjct 1702 VILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQC--LAEKNELELEPLNLGLISA 176 RL NP+YY L SH ++ FLS L+E ++ LE + C + E N +EPL G I++ Sbjct 1762 RLIMNPSYYNLGDVSHDSVNKFLSHLIEKSLIELELSYCIEIGEDNR-SIEPLTYGRIAS 1820 Query 177 FYYVKVATIELF 188 +YY+K T+++F Sbjct 1821 YYYLKHQTVKMF 1832 Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 6/195 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT--ENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V AWG+ + +H V+I T+ + + D I DV+Q+ GRA RP DK G Sbjct 805 VLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEG 864 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +++ K Y + + PIESQ + L D++NAE+ L T+ + ++AV W+++++LY Sbjct 865 IIITTHDKLSHYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYV 924 Query 119 RLSKNPNYYGLQGTSHQ---HLSDFLSELVESAVHSLEQAQCLA-EKNELELEPLNLGLI 174 R+ NP YG+ ++Q L +LV L++AQ + E+ +LG Sbjct 925 RMRANPLAYGISHKAYQIDPTLRKHREQLVIEVGRKLDKAQMIRFEERTGYFSSTDLGRT 984 Query 175 SAFYYVKVATIELFN 189 ++ YY+K TIE FN Sbjct 985 ASHYYIKYNTIETFN 999 > pfa:PFD1060w U5 small nuclear ribonucleoprotein-specific protein, putative; K01509 adenosinetriphosphatase [EC:3.6.1.3] Length=2874 Score = 174 bits (441), Expect = 2e-43, Method: Composition-based stats. Identities = 82/193 (42%), Positives = 131/193 (67%), Gaps = 3/193 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDT--KRFTENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 +++ + + + L + ++ V+I+DT F N EDY I ++L+M+ A R D +V Sbjct 2333 ILIVSYDYIYSLNVYANNVIILDTIITHFHNNKEEDYSIQNILEMISYAGRQNEDTKAFV 2392 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 + +K+E+YK FI+EPL +ES +E +L + +N E+V+ TIE+ QDA+DWLTWSF YR Sbjct 2393 YIYTYITKKEYYKNFIYEPLTVESNIEDNLPNFLNNEIVMSTIENYQDAIDWLTWSFFYR 2452 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCL-AEKNELELEPLNLGLISAF 177 R+ KNPNYYGL+G S++H+SD+LSEL+E+ + L A C+ E+ ++++P NLG+IS+F Sbjct 2453 RIKKNPNYYGLKGISNEHISDYLSELIENNMEILSFANCINIEEQTMDIKPCNLGIISSF 2512 Query 178 YYVKVATIELFNR 190 Y + I FN+ Sbjct 2513 YNLDYHIIHFFNQ 2525 Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats. Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 2/131 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTEN--GYEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V AWG+ + +H V+I T + N +++ DVLQM+GR+ RP DK G Sbjct 1129 VLVCTSTLAWGINLPAHTVIIKGTSVYNINIGDFDELSSMDVLQMVGRSGRPQYDKSGKA 1188 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +++ + Y E L IES L ++ + +NAE+VLK I++ DA++WL +++Y Sbjct 1189 IIITDHKNLQLYLSLNNEQLFIESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYI 1248 Query 119 RLSKNPNYYGL 129 R+ K P+ YG+ Sbjct 1249 RMLKCPSLYGV 1259 > mmu:77987 Ascc3, ASC1p200, B630009I04Rik, BC023451, D430001L07Rik, D630041L21, Helic1, RNAH; activating signal cointegrator 1 complex subunit 3; K01529 [EC:3.6.1.-] Length=2198 Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 84/192 (43%), Positives = 123/192 (64%), Gaps = 5/192 (2%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V++A AWG+ +HLV+I T+ + Y D+PI DVLQM+GRA RP D G Sbjct 1643 VLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKA 1702 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V+L K++FYKKF++EP P+ES L L DH+NAE+ TI SKQDA+D++TW++ +R Sbjct 1703 VILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1762 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCL--AEKNELELEPLNLGLISA 176 RL NP+YY L S ++ FLS L+ ++ LE + C+ E N +EPL G I++ Sbjct 1763 RLIMNPSYYSLGDVSQDSINKFLSHLIGQSLVELELSHCIEVGEDNR-TIEPLTCGRIAS 1821 Query 177 FYYVKVATIELF 188 +YY+K T+++F Sbjct 1822 YYYLKHKTVKMF 1833 Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 6/195 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT--ENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V AWG+ + +H VVI T+ + + D I DV+Q+ GRA RP DK G Sbjct 806 VLVCTATLAWGVNLPAHAVVIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEG 865 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +++ K Y + + PIESQ + L D++NAE+ L T+ + ++AV W+++++LY Sbjct 866 IIITTHDKLSHYLSLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVRWMSYTYLYV 925 Query 119 RLSKNPNYYGLQGTSHQ---HLSDFLSELVESAVHSLEQAQCLA-EKNELELEPLNLGLI 174 R+ NP YG+ ++Q L +L+ L++A+ + E+ +LG Sbjct 926 RMRANPLAYGISHKAYQIDPTLRKHREQLLIEVGQKLDKAKMIRFEERTGYFSSTDLGRT 985 Query 175 SAFYYVKVATIELFN 189 ++ +Y+K TIE FN Sbjct 986 ASHFYIKYNTIETFN 1000 > bbo:BBOV_III000950 17.m07111; sec63 domain containing protein (EC:3.6.1.-); K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2133 Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 85/192 (44%), Positives = 118/192 (61%), Gaps = 5/192 (2%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTEN---GYEDYPIADVLQMLGRATRPGIDKH-G 56 V++ A W + + + +VVI D N YP D+ +ML A H Sbjct 1659 VLICTASAIWTMSIYAPVVVIADITVSATNRPISQSMYPQTDLTRMLSCAYVSDDAAHRP 1718 Query 57 YVVLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFL 116 ++L SSKR K + + P+ES LE +++ +NAE+V IES QDA+DWLTW+ Sbjct 1719 QALILYESSKRRQLYKLLEDAFPVESCLENRIEELINAEIVQGAIESPQDAIDWLTWTLY 1778 Query 117 YRRLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISA 176 YRRL+KNPNYY +QGTS QH+SD LSELVES SLE+AQC++ ++ + PLNLG I+A Sbjct 1779 YRRLTKNPNYYSMQGTSAQHMSDHLSELVESTFASLEKAQCVS-MDDAGVTPLNLGYIAA 1837 Query 177 FYYVKVATIELF 188 FYY++ TI+ F Sbjct 1838 FYYLRCRTIDTF 1849 Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 9/197 (4%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT--ENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 ++++ +WG+ + +H V+I T+ ++ E + + V QMLGRA RP DK G Sbjct 807 LLISTATLSWGVNLPAHTVIIKGTQVYSPEEGCWTELCPLSVQQMLGRAGRPQYDKEGKG 866 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +++ SK +FY + LPIESQL L D +NAE+VL I ++ DAV WL ++ Sbjct 867 IIITSHSKLQFYLSLNNQQLPIESQLVTTLPDLLNAEIVLGNITTRNDAVTWLGDTYFSI 926 Query 119 RLSKNPNYYGL--QGTSHQHLSDFLSELVESAVHSL-----EQAQCLAEKNELELEPLNL 171 R+ + P Y + + D S +ES HS + A E+ ++ L Sbjct 927 RMRREPRLYSVITDDDDAEPTEDMFSARLESLAHSALLELDKHALIRYERRSGAIKATPL 986 Query 172 GLISAFYYVKVATIELF 188 G I++ YY+K +++ + Sbjct 987 GRIASLYYLKPPSVKTY 1003 > cel:Y54E2A.6 hypothetical protein; K01529 [EC:3.6.1.-] Length=1798 Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 75/191 (39%), Positives = 121/191 (63%), Gaps = 3/191 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V++A AWG+ +HLV++ T+ F + Y D+P+ DVLQM+GRA RP D Sbjct 1279 VLIATATLAWGINCPAHLVIVKGTEYFDGKKGKYVDFPVTDVLQMMGRAGRPQFDDSAVA 1338 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V+ +K+ FYKKF++EP P+ES L L +HVNAE+ TI+SKQ V++L+ ++LYR Sbjct 1339 VIYVQDAKKTFYKKFLYEPFPVESSLLPVLPNHVNAEISAGTIDSKQAIVEYLSKTYLYR 1398 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELE-LEPLNLGLISAF 177 RL NPNYYGL+ S + + F++++V+ +V L ++C+ +E + ++P G I++ Sbjct 1399 RLFANPNYYGLEEDSEEAMLKFITKIVDDSVAELLASECIHVDSEQDVIKPTPCGRIASV 1458 Query 178 YYVKVATIELF 188 YY++ T+ Sbjct 1459 YYLQHETVRFL 1469 Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 6/195 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRF-TENG-YEDYPIADVLQMLGRATRPGIDKHGYV 58 V+ AWG+ + +H VVI T F E G + D + DV Q+ GRA RP + G+ Sbjct 426 VLFCTATLAWGVNLPAHAVVIKGTDVFDAEKGVFTDLGVLDVQQIFGRAGRPQFENEGHG 485 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +++ K + Y + PIESQ L D++NAEV L T+ + + V+WLT++++Y Sbjct 486 IIITTRDKIDKYLTMLVHQNPIESQFYARLHDNLNAEVALGTVSTVDEGVEWLTYTYMYT 545 Query 119 RLSKNPNYYGLQGTSHQ---HLSDFLSELVESAVHSLEQAQCLAEKNELE-LEPLNLGLI 174 R KNP YG+ + + +L D ++ A L+Q + + E L +LG I Sbjct 546 RALKNPMAYGIAYNAIERDPNLRDHFGNVIREAAMQLDQNKMIRFDMATEYLNSTDLGRI 605 Query 175 SAFYYVKVATIELFN 189 ++ +YVK TI+L N Sbjct 606 ASNFYVKYETIQLLN 620 > dre:100332599 mutagen-sensitive 308-like Length=864 Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 69/149 (46%), Positives = 103/149 (69%), Gaps = 1/149 (0%) Query 41 LQMLGRATRPGIDKHGYVVLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKT 100 +QM+GRA RP D G V+L K++FYKKF++EP P+ES L L DH+NAE+ T Sbjct 518 IQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNAEIAAGT 577 Query 101 IESKQDAVDWLTWSFLYRRLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCL-A 159 + SKQDA+D++TW++ +RRL NP+YY L SH+ ++ +LS LVE ++ LE + C+ Sbjct 578 VTSKQDAMDYITWTYFFRRLVMNPSYYNLDDISHETINKYLSNLVERSLRDLECSYCMEI 637 Query 160 EKNELELEPLNLGLISAFYYVKVATIELF 188 +++E +EPL G IS++YY+K TI +F Sbjct 638 QQDEQTIEPLTYGRISSYYYLKHQTIRMF 666 > sce:YGR271W SLH1; Putative RNA helicase related to Ski2p, involved in translation inhibition of non-poly(A) mRNAs; required for repressing propagation of dsRNA viruses (EC:3.6.1.-); K01529 [EC:3.6.1.-] Length=1967 Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 116/189 (61%), Gaps = 6/189 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTEN--GYEDYPIADVLQMLGRATRPGIDKHGYV 58 +++A AWG+ + +HLV+I T+ F GY D + D+LQM+GRA RP D G Sbjct 1457 ILIATSTLAWGVNLPAHLVIIKGTQFFDAKIEGYRDMDLTDILQMMGRAGRPAYDTTGTA 1516 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 ++ SK+ FYK F+ P+ES L + L DH+ AE+ +I +KQ+A+D+L+W+FL+R Sbjct 1517 IVYTKESKKMFYKHFLNVGFPVESSLHKVLDDHLGAEITSGSITNKQEALDFLSWTFLFR 1576 Query 119 RLSKNPNYYGLQ-GTSHQHLSDFLSELVESAVHSLEQAQC-LAEKNELELEPLNLGLISA 176 R NP YYG++ TS +S+ LS L++S + +L ++QC L +++ P IS+ Sbjct 1577 RAHHNPTYYGIEDDTSTAGVSEHLSSLIDSTLENLRESQCVLLHGDDIVATP--FLSISS 1634 Query 177 FYYVKVATI 185 +YY+ TI Sbjct 1635 YYYISHLTI 1643 Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 106/197 (53%), Gaps = 7/197 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V+ AWG+ + + V+I T+ + + G+ D I+DV+Q+ GR RPG Sbjct 621 VLCCTATLAWGVNLPADCVIIKGTQVYDSKKGGFIDLGISDVIQIFGRGGRPGFGSANGT 680 Query 59 VLLCPSSKR-EFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLY 117 +LC S+ R + Y I + PIES+ L D++NAE+ L ++ + +A++WL +++++ Sbjct 681 GILCTSNDRLDHYVSLITQQHPIESRFGSKLVDNLNAEISLGSVTNVDEAIEWLGYTYMF 740 Query 118 RRLSKNPNYYGL---QGTSHQHLSDFLSELVESAVHSLEQAQCLA-EKNELELEPLNLGL 173 R+ KNP YG+ + + L + +++ A L Q + ++ + +LG Sbjct 741 VRMRKNPFTYGIDWEEIANDPQLYERRRKMIVVAARRLHALQMIVFDEVSMHFIAKDLGR 800 Query 174 ISAFYYVKVATIELFNR 190 +S+ +Y+ ++E+FN+ Sbjct 801 VSSDFYLLNESVEIFNQ 817 > tgo:TGME49_049810 activating signal cointegrator 1 complex subunit 3, putative (EC:5.99.1.3) Length=2539 Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 111/197 (56%), Gaps = 13/197 (6%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTE--NGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V+VA AWG+ + + LVV+ T+ + N Y+D+PI D+LQM+GRA RP D Sbjct 1901 VLVATATLAWGMNLPARLVVVKGTEYYDAETNRYKDFPITDLLQMIGRAGRPQFDSQAVA 1960 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V+ C K+ FYK+F+++P P+ES L L +H+NAE+V TI++KQ A+++LTW++ +R Sbjct 1961 VIFCHEPKKNFYKRFLYQPFPVESCLLNVLAEHLNAEIVGGTIQTKQQAIEYLTWTYFFR 2020 Query 119 RLSKNPNYYGLQGTSHQHLSDFLS---ELVESAVHS--------LEQAQCLAEKNELELE 167 RL+ NP+YY S F S L SAV +++A C A LE Sbjct 2021 RLTSNPSYYDPSLMIQDFTSSFASRGDRLQASAVRQRRAAIAAFVDKAVCEALDELLEAS 2080 Query 168 PLNLGLISAFYYVKVAT 184 L L +A ++ T Sbjct 2081 ALRLRFPTAEEKLQAVT 2097 Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query 9 AWGLQMSSHLVVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKHGYVVLLCPSSK 66 AWG+ + + V+I T + G+ D + DVLQ+ GRA RP D G VL+ + Sbjct 1021 AWGVNLPARTVIIKGTSVYDSKSGGFRDISVLDVLQIFGRAGRPQYDTRGSAVLITEGHE 1080 Query 67 REF-YKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYRRLSKNPN 125 R Y + LP+ES+ ++L++ +NAEV + T+ S +AVDWL ++F + R+ +NP Sbjct 1081 RLMRYVGQLTHSLPVESKFLENLENALNAEVAIGTVSSVDEAVDWLRYTFCFVRMCRNPR 1140 Query 126 YYGLQGT---SHQHLSDFLSELVESAVHSLEQAQCLAEKNELE-LEPLNLGLISAFYYVK 181 YG T L +L+ A +L + + + + + L+P NLG ++ YYV Sbjct 1141 VYGADETILMDDPELCALRRKLIVDAAETLHKHRLIRFNSRTQRLDPTNLGRMACRYYVD 1200 Query 182 VATIELFNR 190 T LF + Sbjct 1201 YETASLFRQ 1209 > tpv:TP03_0747 ATP-dependent RNA helicase; K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2249 Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 19/207 (9%) Query 1 VVVAAEEAAWGLQMSSHLVVIVD-----TKR-FTENGYEDYPIADVLQMLGRATR-PGID 53 V++ + W L + V++ D T R +N Y Y + +L + + D Sbjct 1763 VLIVTSQVLWNLNIKCPYVIVADVNASYTNRPLVQNYYTQYDLQYILSLANPTSNYDKSD 1822 Query 54 KHG----YVVLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVD 109 H + L ++K+E K+ +++ + +ES LE L++ +N E+V I++ Q+A+D Sbjct 1823 DHEDEDLECIFLLENNKKEEVKRMLYDSVVVESNLELSLEEALNNEIVRGLIKTPQEAID 1882 Query 110 WLTWSFLYRRLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNEL----- 164 WLTW+F YRRLSKNPNYY L T+ QHLS+ LSEL+E+ +++L+ + +L Sbjct 1883 WLTWTFYYRRLSKNPNYYSLIATTPQHLSEHLSELIENTIYNLKNMGLIQTSQDLPDSEE 1942 Query 165 ---ELEPLNLGLISAFYYVKVATIELF 188 E+ +NLG I++FY V+ TIELF Sbjct 1943 EIEEIMAVNLGHIASFYSVRCGTIELF 1969 Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 109/212 (51%), Gaps = 24/212 (11%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT--ENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 ++V+ +WG+ + + +V+I T+ + + +++ V QM+GRA RP D G Sbjct 833 LLVSTATLSWGVNLPAGVVIIKGTQIYVPEQGSWDELCPLSVQQMMGRAGRPQFDTFGKG 892 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +++ + K ++Y + LPIESQL L + +N+E+VL+ I + Q A++W+ ++LY Sbjct 893 IIITANEKLQYYLSLNNQQLPIESQLIAKLPEVLNSEIVLRNITNLQQALEWIKTTYLYV 952 Query 119 RLSKNPNYYGLQ---------------------GTSHQHLSDFLSELVESAVHSLEQAQC 157 R+ KNP YG + + L ++L L+ S+ LE+ Sbjct 953 RVKKNPLLYGFETEDEELDEDDNMEGEEDKPEPKIDMEKLENYLLVLINSSFVHLEKNGL 1012 Query 158 LA-EKNELELEPLNLGLISAFYYVKVATIELF 188 + E+ + LG+I++ YY++ +I+++ Sbjct 1013 IKYERKSGMVTSTGLGVIASNYYLRPESIKIY 1044 > sce:YER172C BRR2, PRP44, RSS1, SLT22, SNU246; Brr2p (EC:3.6.1.-); K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2163 Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 109/194 (56%), Gaps = 4/194 (2%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT--ENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V AWG+ + +H V+I T ++ + +E DVLQMLGRA RP D G Sbjct 827 VLVCTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEG 886 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +++ S ++Y + + LPIESQ L D++NAEVV I+ + DAV+WL +++LY Sbjct 887 IIITDQSNVQYYLSVLNQQLPIESQFVSKLVDNLNAEVVAGNIKCRNDAVNWLAYTYLYV 946 Query 119 RLSKNPNYYGLQG-TSHQHLSDFLSELVESAVHSL-EQAQCLAEKNELELEPLNLGLISA 176 R+ +P Y + +S L F LV SA+ L EQ L + +E +LG I++ Sbjct 947 RMLASPMLYKVPDISSDGQLKKFRESLVHSALCILKEQELVLYDAENDVIEATDLGNIAS 1006 Query 177 FYYVKVATIELFNR 190 +Y+ A+++++NR Sbjct 1007 SFYINHASMDVYNR 1020 Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 109/189 (57%), Gaps = 21/189 (11%) Query 19 VVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKH-GYVVLLCPSSKREFYKKFIF 75 V+I+ T + E+ Y Y I ++L+M+G A+ G D G V++L + + +YKKF+ Sbjct 1680 VIILGTNLYDGAEHKYMPYTINELLEMVGLAS--GNDSMAGKVLILTSHNMKAYYKKFLI 1737 Query 76 EPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYRRLSKNPNYYGLQGTSHQ 135 EPLP ES L+ + D +N E+ I+SKQD VDW T+S+ YRR+ NP+YYG++ TS Sbjct 1738 EPLPTESYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPH 1797 Query 136 HLSDFLSELVESAVHSL----------EQAQCLAEKNELE------LEPLNLGLISAFYY 179 +S FLS LVE+ ++ L +A+ AE N + + L+ GLI++ Y Sbjct 1798 GISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIISTLSNGLIASHYG 1857 Query 180 VKVATIELF 188 V TI+ F Sbjct 1858 VSFFTIQSF 1866 > pfa:PF14_0370 DEAD/DEAH box helicase, putative; K01509 adenosinetriphosphatase [EC:3.6.1.3] Length=2472 Score = 113 bits (283), Expect = 3e-25, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 18/206 (8%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 +++ AWG+ + ++LV+I + + Y+D P D+LQM+GRA RP D Sbjct 1841 ILICTSTLAWGINLPAYLVIIKGNEFYDAKTKKYKDIPYTDLLQMIGRAGRPQFDDKALA 1900 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +LL ++ K F++ P+ IES + ++ +H+NAE+ I +K+D ++LT S+ ++ Sbjct 1901 ILLVQEKRKNAIKNFLYHPMNIESNIMENFNEHINAEICSNVINNKEDIFNYLTKSYYFK 1960 Query 119 RLSKNPNYY-------------GLQGTSHQHLSDFLSELVESAVHSLEQAQCL---AEKN 162 RL NP+YY L + + + D L++++E+ + L Q +CL E Sbjct 1961 RLFSNPSYYIKEVQYVQFFENSKLSTHAKKIIYDHLNDVIENGIKFLVQNKCLEVVQENY 2020 Query 163 ELELEPLNLGLISAFYYVKVATIELF 188 L LG I++ YY+K T+ F Sbjct 2021 VLNYYATPLGHIASMYYIKCETVYFF 2046 Score = 95.5 bits (236), Expect = 9e-20, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 105/192 (54%), Gaps = 5/192 (2%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT-ENG-YEDYPIADVLQMLGRATRPGIDKHGYV 58 V+ AWG+ + H V+I T F+ E+G ED I D+ Q+ GR RP + HG+ Sbjct 782 VLCCTSTLAWGVNLPVHTVIIKGTNYFSSESGKLEDMDILDINQIFGRCGRPQYESHGHA 841 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +L+ +K Y K + IES +++++H+NAE+ + TI++ +D + WL +++L+ Sbjct 842 ILITERTKLYKYIKLLTNNTVIESNFLKNIENHLNAEISIGTIKNIEDGIKWLEYTYLFI 901 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLN--LGLISA 176 R+ KNP Y + + +L + +++ A+ +L + + L + L + + G I+A Sbjct 902 RMKKNPYLYDVDINNDLNLYNKRKDIIMKAIQNLSENK-LVRRVLLTNDFIGTFYGQIAA 960 Query 177 FYYVKVATIELF 188 YYV TI +F Sbjct 961 KYYVDYKTIGMF 972 > mmu:330149 Hfm1, A330009G12Rik, Gm1046, Sec63d1; HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) Length=1434 Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 98/189 (51%), Gaps = 1/189 (0%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A G+ M +HLVVI T ++ +E+Y D+LQM+GRA RP D V+ Sbjct 607 VLFTTSTLAMGMNMPAHLVVIKSTMHYSGGVFEEYSETDILQMIGRAGRPQFDTTATAVI 666 Query 61 LCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYRRL 120 + S RE Y + + +ES L +HL +H+NAE+VL TI A+DW+ + LY R Sbjct 667 MTRLSTREKYVQMLACNDTVESSLHRHLIEHLNAEIVLHTITDVNIALDWIRSTMLYIRA 726 Query 121 SKNPNYYGL-QGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFYY 179 KNP++YG G + + L EL + L + ++ +P G + A+YY Sbjct 727 LKNPSHYGFSSGLNKDGIEAKLQELCLKNLKDLSSLDLIKMDEDVNFKPTEAGRLMAWYY 786 Query 180 VKVATIELF 188 + T++ F Sbjct 787 ITFETVKKF 795 > bbo:BBOV_I001530 19.m02171; helicase Length=1798 Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 19/202 (9%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V++A AWG+ + + +V++ T+ + Y DY + D+LQM+GRA R DK Y Sbjct 1351 VLIATATLAWGVNLPAKIVIVKGTEYYDGKTKKYADYSVTDILQMVGRAGRRVFDKEAYA 1410 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 + S K +FYK F+F P P ES + L D +N+E+ TI +K + +L +F ++ Sbjct 1411 YVYTESRKVDFYKAFMFSPFPAESSFHERLLDSMNSEIASGTIANKAQGLQYLKNTFFFK 1470 Query 119 RLSKNPNYY-------GLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELE------ 165 RL KNP YY G +G + D + ++ V L + C++ K+ Sbjct 1471 RLKKNPQYYLNIDLFNGYEG--ELAIEDLTNWVISKCVEKLNELGCISTKSTATSVYNDD 1528 Query 166 --LEPLNLGLISAFYYVKVATI 185 P +G++++ YY+ T+ Sbjct 1529 NVFIPSIIGILASQYYISCETM 1550 Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 105/191 (54%), Gaps = 5/191 (2%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIA--DVLQMLGRATRPGIDKHGYV 58 V+V+ AWG+ + ++ V+I T F D I ++ Q++GRA RP D G Sbjct 495 VLVSTSTLAWGVNLPANCVIIKGT--FIGGLGVDRNINYLELTQIMGRAGRPQFDTSGTG 552 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 VL+ Y K E LPIES L +HL++ +NAE+VL T+ + DAV WL ++FLY Sbjct 553 VLITEHKNLNDYIKMQTEQLPIESHLHRHLENALNAEIVLGTVVDEADAVTWLRYTFLYV 612 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLA-EKNELELEPLNLGLISAF 177 R+ KN YG++ ++ + + L ++V A +L++++ + + E +LG I+A Sbjct 613 RMRKNALKYGIKSSNDGEIFNQLHKIVRDAAINLDRSKLIRYHEPSGEFASTDLGRIAAR 672 Query 178 YYVKVATIELF 188 YYV TI F Sbjct 673 YYVDYETIYNF 683 > tpv:TP01_0582 RNA helicase Length=1764 Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 36/224 (16%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTE--NGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V++A AWG+ + + +V+I T+ + Y DY D++QM+GRA R D Y Sbjct 1299 VLIATSTLAWGVNLPAKIVIIKGTEFYDGRVKRYIDYSATDIIQMVGRAGRNIYDGEAYA 1358 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 + + K FYK F+F P P ES + + D +N+E+ ++ +K+ A+D+L+ +FLY+ Sbjct 1359 YVFTETRKVGFYKAFMFTPFPTESFFLEKINDCLNSEIATGSVTTKKGALDYLSRTFLYK 1418 Query 119 RLSKNPNYYG-------------------------LQGTSHQHLSDFLSELVESAVHSLE 153 RL NP YY L G L D +V +A+ SL Sbjct 1419 RLKSNPKYYTQSPNPLYEDKGDVINDGNNSLNFVKLSGVDGTKLEDICEAIVNNAISSLV 1478 Query 154 QAQCLA---EKNELE------LEPLNLGLISAFYYVKVATIELF 188 + C++ ++EL+ L P G+ ++ YYV T+ F Sbjct 1479 KLGCVSLEYPEDELKIIEHGLLVPTLNGIFASQYYVNCKTVHEF 1522 Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 5/191 (2%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADV--LQMLGRATRPGIDKHGYV 58 V+V AWG+ + +H V+I T F D I ++ Q++GRA RP D G Sbjct 451 VLVCTSTLAWGVNLPAHSVIIKGT--FIGGVGVDRNINNLELNQIMGRAGRPQFDVEGKG 508 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +LL Y + E +PIESQL HL++ +NAE+ + +I + DA+ WL +++L+ Sbjct 509 ILLTDHKNLYSYVRMQTERVPIESQLHVHLENFLNAEIAIGSINNDTDALLWLQYTYLFV 568 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNEL-ELEPLNLGLISAF 177 R+ KNP +YG+ G L + E++++A +L +++ + ++ + +LG I+A Sbjct 569 RMVKNPLFYGINGDDEDTLLKYRHEIIKNAAKNLNKSKLIRYSSKTGDFSSTDLGRIAAR 628 Query 178 YYVKVATIELF 188 YYV T F Sbjct 629 YYVDYETTHNF 639 > hsa:164045 HFM1, FLJ36760, FLJ39011, MER3, MGC163397, RP11-539G11.1, SEC63D1, Si-11, Si-11-6, helicase; HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) (EC:3.6.4.12) Length=1435 Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 1/189 (0%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A G+ + +HLVVI T + +E+Y D+LQM+GRA RP D V+ Sbjct 609 VLFTTSTLAMGVNLPAHLVVIKSTMHYAGGLFEEYSETDILQMIGRAGRPQFDTTATAVI 668 Query 61 LCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYRRL 120 + S R+ Y + + +ES L +HL +H+NAE+VL TI AV+W+ + LY R Sbjct 669 MTRLSTRDKYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRA 728 Query 121 SKNPNYYGL-QGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFYY 179 KNP++YG G + + L EL ++ L + + +P G + A+YY Sbjct 729 LKNPSHYGFASGLNKDGIEAKLQELCLKNLNDLSSLDLIKMDEGVNFKPTEAGRLMAWYY 788 Query 180 VKVATIELF 188 + T++ F Sbjct 789 ITFETVKKF 797 > dre:557052 hfm1, si:ch211-83f14.5; HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) Length=1228 Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 15/189 (7%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A G+ M +HLVVI T + E+Y AD+LQM+GRA RP D V+ Sbjct 515 VLFTTSTLAMGVNMPAHLVVIKSTMHYVGGACEEYSEADLLQMIGRAGRPQFDTTATAVI 574 Query 61 LCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYRRL 120 + ++ Y F+ IES L +L +H+NAE+VL TI A+DW+ +FLY R Sbjct 575 MTRPQTKDKYMHFLSGLDCIESSLHTNLVEHLNAEIVLHTISDVNMALDWIRSTFLYIRA 634 Query 121 SKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFYYV 180 KNP +Y EL ++SL + ++ ++P G + A Y V Sbjct 635 LKNPKHY---------------ELCLKNLNSLASFNLITMDEDINIKPTETGKLMARYCV 679 Query 181 KVATIELFN 189 T++ F+ Sbjct 680 AFDTVKQFS 688 > cpv:cgd2_2770 U5 small nuclear ribonucleoprotein 200kDA helicase, Pre-mRNA splicing helicase BRR2 2 (RNA helicase plus Sec63 domain) Length=2184 Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 3/130 (2%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTEN--GYEDYPIADVLQMLGRATRPGIDKHGYV 58 +VVA AWG+ +H +I T+ F Y DYPI DVLQM+GR+ RP D H Sbjct 1595 IVVATSTLAWGVNFPAHFAIIKGTEYFDAKLGQYIDYPITDVLQMVGRSGRPQYDSHSVA 1654 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLE-QHLQDHVNAEVVLKTIESKQDAVDWLTWSFLY 117 ++ +K+ FYK+F+++ LP+ES L + NAEV +I+S DA+ +L+ SF + Sbjct 1655 CIMTLEAKKPFYKRFLYDSLPLESCFGVSPLIEIFNAEVSSLSIKSIPDAICFLSNSFFF 1714 Query 118 RRLSKNPNYY 127 +R+ NP +Y Sbjct 1715 KRVVINPAFY 1724 Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 12/200 (6%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRF--TENGYEDYPIADVLQMLGRATRPGIDKHGYV 58 V++ AWG+ + + V+I T + + ++D I D+LQ+ GRA RP +K G Sbjct 664 VLITTATLAWGVNLPARHVIIKGTNVYDSKKGSFKDLGILDILQIFGRAGRPQFEKLGSA 723 Query 59 VLLCPSSKREFY-KKFIFEPLPIESQL--EQHLQDHVNAEVVLKTIESKQDAVDWLTWSF 115 ++ S K + Y KK F+ PIESQL E +L + +NAE+ +I + +DA WL ++F Sbjct 724 YMITSSDKVQSYVKKLTFQA-PIESQLSNESNLCNLLNAEIARGSILNAKDASRWLKYTF 782 Query 116 LYRRLSKNPNYYGLQG---TSHQHLSDFLSELVESAVHSLEQAQCLAEK--NELELEPLN 170 L R+ K+P YG + + +L+ F + + L Q++ + NE E+ P + Sbjct 783 LVTRVKKSPIAYGFKAEEIINDPNLAQFCYNNISKCLDLLYQSKLIRYNIINE-EVSPTH 841 Query 171 LGLISAFYYVKVATIELFNR 190 G +++ YY+ T +F + Sbjct 842 YGRLASKYYIDFNTANIFRK 861 > cpv:cgd5_2960 U5snrp Brr2 SFII RNA helicase (sec63 and the second part of the RNA Length=1204 Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 2/167 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT-ENG-YEDYPIADVLQMLGRATRPGIDKHGYV 58 V+V AWG+ + +H V+I T+ + E G + + D+LQM+GR RP D +G+ Sbjct 853 VLVTTATLAWGVNLPAHTVIIKGTQIYQPERGEWTELSPLDMLQMIGRGGRPQYDNNGHG 912 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V++ +Y + + L IESQL L D +NAE+ L +++K+DA+DW+ +FLY Sbjct 913 VVITDFDHLTYYLSLLNQQLNIESQLIPKLPDLINAEISLGNVQNKRDALDWIKKTFLYI 972 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELE 165 R+ +NP+ YGL S +LV +LE+ + LA KN +E Sbjct 973 RIIRNPSLYGLDIDEIIDKSRQDKDLVAENKDALEEERDLAFKNAVE 1019 > ath:AT3G27730 RCK; RCK (ROCK-N-ROLLERS); ATP binding / ATP-dependent helicase/ DNA helicase Length=1133 Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 4/190 (2%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFT-ENG-YEDYPIADVLQMLGRATRPGIDKHGYV 58 V+ A G+ + +H VVI T+ F E G Y +Y + +LQM GRA RP D G V Sbjct 363 VICTTNTLAHGINLPAHTVVIKSTQHFNKEKGHYMEYDRSTLLQMSGRAGRPPFDDTGMV 422 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 +++ Y+ + +ESQL L +H+ AE+V TI A++W+ S+LY Sbjct 423 IIMTRRETVHLYENLLNGCEVVESQLLPCLIEHLTAEIVQLTISDITRAIEWMKCSYLYV 482 Query 119 RLSKNPNYYGL-QGTSHQHLSDFLSELVESAVHSLEQAQCL-AEKNELELEPLNLGLISA 176 R+ KNP Y + +G + L EL ++ L Q Q + + + L+P G + Sbjct 483 RMKKNPENYAIKKGIPKDRVEKHLQELCLQKINELSQYQMIWTDTDGFVLKPEEPGRLMT 542 Query 177 FYYVKVATIE 186 YY+K T++ Sbjct 543 KYYLKFETMK 552 > cpv:cgd5_2970 hypothetical protein Length=622 Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 78/134 (58%), Gaps = 13/134 (9%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYE------------DYPIADVLQMLGRAT 48 +++A E+ + + VV++DTK+ + + DY D+ QML R Sbjct 483 IIIACEDMKNSITLKFDYVVVMDTKKIDYDDNKGSLINSKIRKTIDYSQFDIHQMLSRC- 541 Query 49 RPGIDKHGYVVLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAV 108 R +D + +LLC S+K+EFY+ I LP+ES ++ + D +N E+ LKTI++KQD + Sbjct 542 RNQMDHYSNFILLCSSNKQEFYEYTINNSLPLESNIDFGIIDCLNTEIALKTIKTKQDTI 601 Query 109 DWLTWSFLYRRLSK 122 DW+TW+ YRR+SK Sbjct 602 DWITWTLFYRRISK 615 > sce:YGL251C HFM1, MER3; Hfm1p (EC:3.6.1.-); K01529 [EC:3.6.1.-] Length=1187 Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 0/127 (0%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 ++ + A G+ + ++LV+I TK + + ++Y DVLQM+GRA RP + HG V+ Sbjct 447 ILCSTSTLAVGVNLPAYLVIIKGTKSWNSSEIQEYSDLDVLQMIGRAGRPQFETHGCAVI 506 Query 61 LCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYRRL 120 + S ++ Y+ I +ES L +L +H+ AE L+T+ S + AV+WL +F Y R Sbjct 507 MTDSKMKQTYENLIHGTDVLESSLHLNLIEHLAAETSLETVYSIETAVNWLRNTFFYVRF 566 Query 121 SKNPNYY 127 KNP Y Sbjct 567 GKNPAAY 573 > dre:559653 skiv2l, fb70b07, wu:fb70b07; superkiller viralicidic activity 2 (S. cerevisiae homolog)-like; K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1230 Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A E A G+ M + VV ++ G+ + + +QM GRA R G+D G V++ Sbjct 653 VLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGTVII 712 Query 61 LCPSS---KREFYKKFIFEPLPIESQL 84 LC + E + + +P + SQ Sbjct 713 LCKAGVHDMGELHSMMLGKPTVLHSQF 739 > hsa:6499 SKIV2L, 170A, DDX13, HLP, SKI2, SKI2W, SKIV2; superkiller viralicidic activity 2-like (S. cerevisiae); K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1246 Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A E A G+ M + VV ++ + + D + +QM GRA R G+D G V+L Sbjct 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVIL 717 Query 61 LCPSSKRE---FYKKFIFEPLPIESQL 84 LC E ++ + +P ++SQ Sbjct 718 LCKGRVPEMADLHRMMMGKPSQLQSQF 744 > mmu:108077 Skiv2l, 4930534J06Rik, AW214248, Ddx13, SKI, Ski2w; superkiller viralicidic activity 2-like (S. cerevisiae); K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1244 Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A E A G+ M + VV ++ + + D + +QM GRA R G+D G V+L Sbjct 655 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVIL 714 Query 61 LCPSSKRE---FYKKFIFEPLPIESQL 84 LC E ++ + +P ++SQ Sbjct 715 LCKGRVPEMADLHRMMMGKPSQLQSQF 741 > dre:100331276 superkiller viralicidic activity 2-like; K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1235 Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A E A G+ M + VV ++ + + D + +QM GRA R G+D G V+L Sbjct 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVIL 717 Query 61 LCPSSKRE---FYKKFIFEPLPIESQLE 85 LC E ++ + +P ++SQ Sbjct 718 LCKGRVPEMADLHRMMMGKPSQLQSQFR 745 > ath:AT1G59760 ATP-dependent RNA helicase, putative; K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=988 Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 0/58 (0%) Query 4 AAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVLL 61 A E + GL M + VV + ++F + + + +QM GRA R GIDK G +L+ Sbjct 415 ATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGICILM 472 > sce:YLR398C SKI2; Ski complex component and putative RNA helicase, mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay (EC:3.6.1.-); K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1287 Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A E A GL + + V+ ++ NG + + QM GRA R G+D G V++ Sbjct 718 VLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIV 777 Query 61 LC---PSSKREFYKKFIFEPLPIESQL 84 + P S F + + P ++SQ Sbjct 778 MAYNSPLSIATFKEVTMGVPTRLQSQF 804 > cel:W08D2.7 mtr-4; yeast MTR (mRNA TRansport) homolog family member (mtr-4); K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=1026 Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 8/113 (7%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A E + GL M + VV ++F + + +QM GRA R G D G V+L Sbjct 465 VLFATETFSMGLNMPARTVVFTSARKFDGSDNRYITSGEYIQMAGRAGRRGKDDRGTVIL 524 Query 61 LCPSSKREFYKKFIFEPL--PIESQLEQHLQDHVNAEVVLKTIESKQDAVDWL 111 + S+ K I + P+ SQ + +VL + + AV W+ Sbjct 525 MVDSAMSADDAKQIIKGATDPLNSQF------RLTYNMVLNLMRVEGMAVSWI 571 > ath:AT1G70070 EMB25; EMB25 (EMBRYO DEFECTIVE 25); ATP-dependent helicase/ RNA helicase Length=1171 Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 0/61 (0%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 VV A E A G+ M + VI + N + ++ QM GRA R GID+ GY VL Sbjct 524 VVFATETLAAGINMPARTAVISSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVL 583 Query 61 L 61 + Sbjct 584 V 584 > hsa:23517 SKIV2L2, Dob1, KIAA0052, MGC142069, Mtr4, fSAP118; superkiller viralicidic activity 2-like 2 (S. cerevisiae) (EC:3.6.4.13); K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=1042 Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 0/58 (0%) Query 4 AAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVLL 61 A E A G+ M + V+ + ++F + + +QM GRA R G+D G V+L+ Sbjct 481 ATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 538 > tpv:TP02_0517 hypothetical protein; K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=1012 Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ + E + GL M + VV K++ + +QM GRA R G+D G V++ Sbjct 447 VLFSTETFSMGLNMPAKTVVFTKMKKWDGREVRYISSGEYIQMAGRAGRRGLDTIGVVII 506 Query 61 LCPSS----KREFYKKFIFEPLPIES 82 + S E K F+ +PL ++S Sbjct 507 MLDKSDVLIDEEVKKIFLGKPLNLDS 532 > ath:AT3G46960 ATP binding / ATP-dependent helicase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding; K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1347 Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 0/62 (0%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ + E A G+ + VV ++F + + QM GRA R G+DK G VV+ Sbjct 741 VLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVV 800 Query 61 LC 62 +C Sbjct 801 MC 802 > bbo:BBOV_II002350 18.m06191; helicase with zinc finger motif protein; K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1113 Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 12/114 (10%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A E A G+ M + V+ + ++ QM GRA R G+D G V + Sbjct 544 VLFATETFAMGVNMPARSVIFTSIHKHDGQKTRHLTASEYTQMAGRAGRRGLDSFGSVYI 603 Query 61 LCPSSKREF--YKKFIFE-PLPIESQ--------LEQHLQDHVN-AEVVLKTIE 102 CP + +FE +ES+ L+ H ++H+N E++LK+ + Sbjct 604 FCPDDPPDLQDLTTMMFEKSTKLESKFRITYNMLLQVHSREHMNITEMMLKSFK 657 > tpv:TP04_0364 hypothetical protein; K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1069 Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 12/117 (10%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A E A G+ M + VV + Y ++ QM GRA R G+D G V + Sbjct 516 VLFATETFAMGVNMPARSVVFTSIYKHDGITYRYLTSSEYTQMAGRAGRRGLDTFGNVYI 575 Query 61 LC---PSSKREFYKKFIFEPLPIESQ--------LEQHLQDHVN-AEVVLKTIESKQ 105 C P ++ I +ES+ L+ +DH+N E++LK+ ++ Sbjct 576 FCSDEPPDVQDLTNMMIERSTRLESRFRITYNMLLQIQSRDHMNITEMMLKSFRERE 632 > cpv:cgd8_2520 Mtr4p like SKI family SFII helicase ; K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=1280 Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust. Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ + E + G+ M + V+ ++F Y + +QM GRA R G+D G + Sbjct 442 VLFSTETFSMGINMPAKTVIFTSLRKFDGKEYRIVNSGEFIQMSGRAGRRGLDDRGITIT 501 Query 61 LCPSSKREFYKKFIF--EPLPIESQL 84 + + K + +PL I+SQ Sbjct 502 MIDELADPWAIKSMLTGQPLRIDSQF 527 > mmu:72198 Skiv2l2, 2610528A15Rik, mKIAA0052; superkiller viralicidic activity 2-like 2 (S. cerevisiae) (EC:3.6.4.13); K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=1040 Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 0/58 (0%) Query 4 AAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVLL 61 A E A G+ M + V+ + +++ + + +QM GRA R G+D G V+L+ Sbjct 479 ATETFAMGINMPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILM 536 > dre:406795 skiv2l2, wu:fd11a05, zgc:63838; superkiller viralicidic activity 2-like 2 (EC:3.6.4.13); K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=1034 Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 0/58 (0%) Query 4 AAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVLL 61 A E A G+ M + V+ ++F + + +QM GRA R G+D+ G V+ + Sbjct 474 ATETFAMGINMPARTVLFTSARKFDGKDFRWISSGEYIQMSGRAGRRGMDERGIVIFM 531 > bbo:BBOV_II005660 18.m06470; DSHCT (NUC185) domain containing DEAD/DEAH box helicase family protein (EC:3.6.1.3); K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=986 Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 0/75 (0%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ + E + G+ M + VV + ++ + +QM GRA R G+D+HG V++ Sbjct 415 VLFSTETFSMGVNMPARCVVFTNLSKWDGQTNRLITSGEYIQMAGRAGRRGLDEHGLVII 474 Query 61 LCPSSKREFYKKFIF 75 + + K IF Sbjct 475 MMDRGIKPEEAKAIF 489 > pfa:PFF0100w ATP-dependent RNA Helicase, putative (EC:3.6.1.-); K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=1350 Score = 37.7 bits (86), Expect = 0.025, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPI--ADVLQMLGRATRPGIDKHGYV 58 V+ + E + G+ M + VV +F +G E I + +QM GRA R G+D G V Sbjct 599 VLFSTETFSMGINMPAKTVVFTSLTKF--DGLEKRLITSGEYIQMAGRAGRRGLDDRGIV 656 Query 59 VLL--CPSSKREFYKKFIFEPLPIESQL 84 +++ P RE +K F+ E + SQ Sbjct 657 IIMLDTPLHWREAHKLFVGEANRLVSQF 684 > tgo:TGME49_085660 DEAD/DEAH box helicase domain-containing protein ; K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1329 Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 0/62 (0%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTENGYEDYPIADVLQMLGRATRPGIDKHGYVVL 60 V+ A E A GL M + VV K+ ++ QM GRA R GID G+V + Sbjct 826 VLFATETLAIGLNMPARSVVFSALKKHDGQRSRMLLASEYTQMAGRAGRRGIDTFGHVYI 885 Query 61 LC 62 C Sbjct 886 FC 887 Lambda K H 0.319 0.135 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5429324208 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40