bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_6698_orf1 Length=182 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_023390 sec63 domain-containing DEAD/DEAH box helica... 343 2e-94 cel:Y46G5A.4 hypothetical protein; K12854 pre-mRNA-splicing he... 283 2e-76 dre:799690 fb63a09; wu:fb63a09 (EC:3.6.4.13); K12854 pre-mRNA-... 282 4e-76 hsa:23020 SNRNP200, ASCC3L1, BRR2, FLJ11521, HELIC2, RP33, U5-... 282 5e-76 mmu:320632 Snrnp200, A330064G03Rik, Ascc3l1, BC011390, HELIC2,... 282 6e-76 bbo:BBOV_III000950 17.m07111; sec63 domain containing protein ... 280 1e-75 hsa:652147 u5 small nuclear ribonucleoprotein 200 kDa helicase... 280 2e-75 ath:AT1G20960 emb1507 (embryo defective 1507); ATP binding / A... 266 2e-71 ath:AT2G42270 U5 small nuclear ribonucleoprotein helicase, put... 255 5e-68 tpv:TP03_0747 ATP-dependent RNA helicase; K12854 pre-mRNA-spli... 249 5e-66 pfa:PFD1060w U5 small nuclear ribonucleoprotein-specific prote... 242 5e-64 cpv:cgd5_2960 U5snrp Brr2 SFII RNA helicase (sec63 and the sec... 233 4e-61 sce:YER172C BRR2, PRP44, RSS1, SLT22, SNU246; Brr2p (EC:3.6.1.... 215 7e-56 ath:AT5G61140 DEAD box RNA helicase, putative; K01529 [EC:3.6... 185 7e-47 hsa:10973 ASCC3, ASC1p200, DJ467N11.1, HELIC1, MGC26074, RNAH,... 177 1e-44 mmu:77987 Ascc3, ASC1p200, B630009I04Rik, BC023451, D430001L07... 172 5e-43 tgo:TGME49_049810 activating signal cointegrator 1 complex sub... 153 3e-37 cel:Y54E2A.6 hypothetical protein; K01529 [EC:3.6.1.-] 151 1e-36 bbo:BBOV_I001530 19.m02171; helicase 142 6e-34 pfa:PF14_0370 DEAD/DEAH box helicase, putative; K01509 adenosi... 142 8e-34 tpv:TP01_0582 RNA helicase 141 1e-33 sce:YGR271W SLH1; Putative RNA helicase related to Ski2p, invo... 137 3e-32 cpv:cgd2_2770 U5 small nuclear ribonucleoprotein 200kDA helica... 135 1e-31 mmu:330149 Hfm1, A330009G12Rik, Gm1046, Sec63d1; HFM1, ATP-dep... 117 1e-26 ath:AT3G27730 RCK; RCK (ROCK-N-ROLLERS); ATP binding / ATP-dep... 114 2e-25 hsa:164045 HFM1, FLJ36760, FLJ39011, MER3, MGC163397, RP11-539... 112 7e-25 dre:557052 hfm1, si:ch211-83f14.5; HFM1, ATP-dependent DNA hel... 111 1e-24 sce:YGL251C HFM1, MER3; Hfm1p (EC:3.6.1.-); K01529 [EC:3.6.1.-] 102 7e-22 ath:AT4G32700 DNA-directed DNA polymerase family protein; K023... 84.7 1e-16 mmu:191578 Helq, AU021725, D430018E21Rik, Hel308, MGC105224; h... 82.8 6e-16 dre:100330111 mutagen-sensitive 308-like 82.0 1e-15 dre:562952 helq, hel308, si:ch211-85e10.2; helicase, POLQ-like 82.0 1e-15 hsa:10721 POLQ, DKFZp781A0112, POLH, PRO0327; polymerase (DNA ... 81.3 2e-15 hsa:113510 HELQ, HEL308, MGC20604; helicase, POLQ-like (EC:3.6... 79.7 5e-15 cel:Y55B1AL.3 hel-308; HELicase family member (hel-308) 77.8 2e-14 cel:F01G4.3 hypothetical protein; K12599 antiviral helicase SK... 77.4 3e-14 dre:566079 bZ1P14.5; si:rp71-1p14.5; K02349 DNA polymerase the... 77.4 3e-14 cel:W03A3.2 polq-1; POLQ (DNA polymerase theta) homolog family... 74.7 1e-13 sce:YLR398C SKI2; Ski complex component and putative RNA helic... 74.7 2e-13 ath:AT1G59760 ATP-dependent RNA helicase, putative; K12598 ATP... 71.6 1e-12 tpv:TP04_0364 hypothetical protein; K12599 antiviral helicase ... 69.7 6e-12 dre:559653 skiv2l, fb70b07, wu:fb70b07; superkiller viralicidi... 69.3 6e-12 cel:W08D2.7 mtr-4; yeast MTR (mRNA TRansport) homolog family m... 68.2 1e-11 cel:C28H8.3 hypothetical protein; K01529 [EC:3.6.1.-] 67.8 2e-11 hsa:6499 SKIV2L, 170A, DDX13, HLP, SKI2, SKI2W, SKIV2; superki... 67.8 2e-11 ath:AT1G70070 EMB25; EMB25 (EMBRYO DEFECTIVE 25); ATP-dependen... 67.4 2e-11 mmu:108077 Skiv2l, 4930534J06Rik, AW214248, Ddx13, SKI, Ski2w;... 67.4 3e-11 ath:AT3G46960 ATP binding / ATP-dependent helicase/ helicase/ ... 67.0 4e-11 sce:YJL050W MTR4, DOB1; ATP-dependent 3'-5' RNA helicase, invo... 66.6 5e-11 mmu:72198 Skiv2l2, 2610528A15Rik, mKIAA0052; superkiller viral... 66.6 5e-11 > tgo:TGME49_023390 sec63 domain-containing DEAD/DEAH box helicase, putative ; K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2198 Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 162/181 (89%), Positives = 173/181 (95%), Gaps = 0/181 (0%) Query 1 ECAGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQD 60 E AGK+QVLIFVHSRKE VKTA+FI D A+Q+DTLPRFLQ +ASREILQ+EAEAVKT D Sbjct 768 ESAGKSQVLIFVHSRKETVKTARFIRDMAMQRDTLPRFLQHMTASREILQSEAEAVKTGD 827 Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 LK+LLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV Sbjct 828 LKELLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 887 Query 121 YLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 YLPEKGAW+ELSPMD+LQMMGRAGRPQYDT GHAILITQHSELQ+YLSLNNQQLPIESQM Sbjct 888 YLPEKGAWAELSPMDVLQMMGRAGRPQYDTSGHAILITQHSELQYYLSLNNQQLPIESQM 947 Query 181 I 181 + Sbjct 948 L 948 Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 5/176 (2%) Query 7 QVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLP 66 V++F R+ TA + A D +FL S E+++ V+ + L + L Sbjct 1623 NVIVFCSDRRHCRLTAIDLLLQAAADDDPKKFLH---VSDEVMRKYTSVVRDKMLSETLA 1679 Query 67 YGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKG 126 YG + H+GL +++LV+ L A IQV+V AWG+ + AH V+I T+ + + Sbjct 1680 YGVGLLHSGLSAAEQQLVQQLHAAGAIQVVVVAEECAWGLQMYAHLVVIVDTKKF--TEN 1737 Query 127 AWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMIQ 182 + + + D+LQM+G A RP D G A+L S+ +FY + LP+ESQ+ Q Sbjct 1738 GYEDYTVADVLQMLGHATRPSIDKHGFAVLFCPSSKREFYKKFVFEPLPVESQLEQ 1793 > cel:Y46G5A.4 hypothetical protein; K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2145 Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 135/181 (74%), Positives = 151/181 (83%), Gaps = 0/181 (0%) Query 1 ECAGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQD 60 E AGK+QVL+FVHSRKE KTAK I DA L+KDTL F++ SAS EIL+ EAE K D Sbjct 707 EHAGKSQVLVFVHSRKETAKTAKAIRDACLEKDTLSAFMREGSASTEILRTEAEQAKNLD 766 Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 LKDLLPYGFA+HHAG+ R DR LVEDLFADRHIQVL STATLAWGVNLPAHTVIIKGTQ+ Sbjct 767 LKDLLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVLFSTATLAWGVNLPAHTVIIKGTQI 826 Query 121 YLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 Y PEKG W+EL +DI+QM+GRAGRPQYD G ILIT HSELQ+YLSL NQQLP+ESQM Sbjct 827 YNPEKGRWTELGALDIMQMLGRAGRPQYDDRGEGILITNHSELQYYLSLMNQQLPVESQM 886 Query 181 I 181 + Sbjct 887 V 887 Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 1/172 (0%) Query 9 LIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLPYG 68 L+FV R++ A + AL RFL+ + + QA ++ + L++ + G Sbjct 1557 LVFVPVRRQTRPVAVALLTMALADGAPKRFLR-LAEHDDTFQALLADIEDESLRESVSCG 1615 Query 69 FAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGAW 128 H G D +V+ LF IQV V + + + + A+ V++ TQ Y + + Sbjct 1616 VGFLHEGTAPKDVHIVQQLFESNAIQVCVVPRGMCYQIEMSAYLVVVMDTQFYNGKYHVY 1675 Query 129 SELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 + D+L M+G A RP D+ +++ Q S+ +Y LP+ES + Sbjct 1676 EDYPIADMLHMVGLANRPILDSDAKCVVMCQTSKRAYYKKFLCDPLPVESHL 1727 > dre:799690 fb63a09; wu:fb63a09 (EC:3.6.4.13); K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2134 Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 136/181 (75%), Positives = 151/181 (83%), Gaps = 0/181 (0%) Query 1 ECAGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQD 60 E AGKNQVL+FVHSRKE KTA+ I D L+KDTL FL+ SAS E+L+ EAE K + Sbjct 711 EHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLE 770 Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 LKDLLPYGFA+HHAG+ R DR LVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV Sbjct 771 LKDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 830 Query 121 YLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 Y PEKG W+EL +DILQM+GRAGRPQYD+ G ILIT H ELQ+YLSL NQQLPIESQM Sbjct 831 YSPEKGRWTELGALDILQMLGRAGRPQYDSKGEGILITSHGELQYYLSLLNQQLPIESQM 890 Query 181 I 181 + Sbjct 891 V 891 Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/177 (36%), Positives = 96/177 (54%), Gaps = 11/177 (6%) Query 8 VLIFVHSRKEAVKTAKFI---CDAALQKDTLP-RFLQSFSASREILQAEAEAVKTQDLKD 63 VL+FV SR++ TA I C A D +P RFL S + + L E + LK+ Sbjct 1555 VLVFVPSRRQTRLTAIDILTFCAA----DVVPQRFLHS---TEKDLVPFMENLSDVTLKE 1607 Query 64 LLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLP 123 L G H GL T+R++VE LF IQV+V++ +L WG N+ AH VI+ TQ Y Sbjct 1608 TLSNGVGYLHEGLSPTERRIVEHLFTSGAIQVVVASRSLCWGTNISAHLVIVMDTQYYNG 1667 Query 124 EKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 + A+ + D+LQM+G+A RP D G +++ Q S+ F+ + LP+ES + Sbjct 1668 KIHAYVDYPIYDVLQMVGKANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHL 1724 > hsa:23020 SNRNP200, ASCC3L1, BRR2, FLJ11521, HELIC2, RP33, U5-200KD; small nuclear ribonucleoprotein 200kDa (U5) (EC:3.6.4.13); K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2136 Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 136/181 (75%), Positives = 151/181 (83%), Gaps = 0/181 (0%) Query 1 ECAGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQD 60 E AGKNQVL+FVHSRKE KTA+ I D L+KDTL FL+ SAS E+L+ EAE K + Sbjct 714 EHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLE 773 Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 LKDLLPYGFA+HHAG+ R DR LVEDLFAD+HIQVLVSTATLAWGVNLPAHTVIIKGTQV Sbjct 774 LKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQV 833 Query 121 YLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 Y PEKG W+EL +DILQM+GRAGRPQYDT G ILIT H ELQ+YLSL NQQLPIESQM Sbjct 834 YSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQM 893 Query 181 I 181 + Sbjct 894 V 894 Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/179 (36%), Positives = 96/179 (53%), Gaps = 9/179 (5%) Query 5 KNQVLIFVHSRKEAVKTAKFI---CDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDL 61 K V++FV SRK+ TA I C A +Q+ RFL + + L E + L Sbjct 1556 KKPVIVFVPSRKQTRLTAIDILTTCAADIQRQ---RFLH---CTEKDLIPYLEKLSDSTL 1609 Query 62 KDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVY 121 K+ L G H GL +R+LVE LF+ IQV+V++ +L WG+N+ AH VII TQ Y Sbjct 1610 KETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYY 1669 Query 122 LPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 + A+ + D+LQM+G A RP D G +++ Q S+ F+ + LP+ES + Sbjct 1670 NGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHL 1728 > mmu:320632 Snrnp200, A330064G03Rik, Ascc3l1, BC011390, HELIC2, KIAA0788, U5-200-KD, U5-200KD; small nuclear ribonucleoprotein 200 (U5) (EC:3.6.4.13); K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2136 Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 136/181 (75%), Positives = 151/181 (83%), Gaps = 0/181 (0%) Query 1 ECAGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQD 60 E AGKNQVL+FVHSRKE KTA+ I D L+KDTL FL+ SAS E+L+ EAE K + Sbjct 714 EHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLE 773 Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 LKDLLPYGFA+HHAG+ R DR LVEDLFAD+HIQVLVSTATLAWGVNLPAHTVIIKGTQV Sbjct 774 LKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQV 833 Query 121 YLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 Y PEKG W+EL +DILQM+GRAGRPQYDT G ILIT H ELQ+YLSL NQQLPIESQM Sbjct 834 YSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQM 893 Query 181 I 181 + Sbjct 894 V 894 Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/179 (36%), Positives = 96/179 (53%), Gaps = 9/179 (5%) Query 5 KNQVLIFVHSRKEAVKTAKFI---CDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDL 61 K V++FV SRK+ TA I C A +Q+ RFL + + L E + L Sbjct 1556 KKPVIVFVPSRKQTRLTAIDILTTCAADIQRQ---RFLH---CTEKDLIPYLEKLSDSTL 1609 Query 62 KDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVY 121 K+ L G H GL +R+LVE LF+ IQV+V++ +L WG+N+ AH VII TQ Y Sbjct 1610 KETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYY 1669 Query 122 LPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 + A+ + D+LQM+G A RP D G +++ Q S+ F+ + LP+ES + Sbjct 1670 NGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHL 1728 > bbo:BBOV_III000950 17.m07111; sec63 domain containing protein (EC:3.6.1.-); K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2133 Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 130/181 (71%), Positives = 152/181 (83%), Gaps = 0/181 (0%) Query 1 ECAGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQD 60 E AGKNQVL+FVHSRKE +TAK I D A + D L FL S SASREIL E+EA+KT + Sbjct 713 EDAGKNQVLVFVHSRKETARTAKLIRDMAFKTDNLGIFLHSDSASREILSTESEAIKTTE 772 Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 LK+LLPYG +HHAGLPR+DRKLVEDLF+D HIQ+L+STATL+WGVNLPAHTVIIKGTQV Sbjct 773 LKELLPYGLGIHHAGLPRSDRKLVEDLFSDGHIQLLISTATLSWGVNLPAHTVIIKGTQV 832 Query 121 YLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 Y PE+G W+EL P+ + QM+GRAGRPQYD G I+IT HS+LQFYLSLNNQQLPIESQ+ Sbjct 833 YSPEEGCWTELCPLSVQQMLGRAGRPQYDKEGKGIIITSHSKLQFYLSLNNQQLPIESQL 892 Query 181 I 181 + Sbjct 893 V 893 Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 16/149 (10%) Query 40 QSFSASREILQAEAEAVKTQD--LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLV 97 +S S + ++ E + T++ L L+ G H G + + ++DL+ I+VL+ Sbjct 1602 ESLSVAEQLTGECWERLSTRERALGTLVQAGVGYCHEGFSDAEIRYIQDLYQRGVIKVLI 1661 Query 98 STATLAWGVNLPAHTVIIKGTQVYLPEKGAWSELSP-MDILQMMG-------RAGRPQYD 149 TA+ W +++ A V+I V + + P D+ +M+ A RPQ Sbjct 1662 CTASAIWTMSIYAPVVVIADITVSATNRPISQSMYPQTDLTRMLSCAYVSDDAAHRPQ-- 1719 Query 150 TGGHAILITQHSELQFYLSLNNQQLPIES 178 A+++ + S+ + L P+ES Sbjct 1720 ----ALILYESSKRRQLYKLLEDAFPVES 1744 > hsa:652147 u5 small nuclear ribonucleoprotein 200 kDa helicase-like Length=1700 Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 135/181 (74%), Positives = 150/181 (82%), Gaps = 0/181 (0%) Query 1 ECAGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQD 60 E AGKNQVL+FVHSRKE KTA+ I D L+KDTL FL+ SAS E+L+ EAE K + Sbjct 278 EHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLE 337 Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 LKDLLPYGFA+HHAG+ R DR LVEDLF D+HIQVLVSTATLAWGVNLPAHTVIIKGTQV Sbjct 338 LKDLLPYGFAIHHAGMTRVDRTLVEDLFGDKHIQVLVSTATLAWGVNLPAHTVIIKGTQV 397 Query 121 YLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 Y PEKG W+EL +DILQM+GRAGRPQYDT G ILIT H ELQ+YLSL NQQLPIESQM Sbjct 398 YSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQM 457 Query 181 I 181 + Sbjct 458 V 458 Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/179 (35%), Positives = 95/179 (53%), Gaps = 9/179 (5%) Query 5 KNQVLIFVHSRKEAVKTAKFI---CDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDL 61 K V++FV SRK+ TA I C A +Q+ RFL + + L E + L Sbjct 1120 KKPVIVFVPSRKQTRLTAIDILTTCAADIQRQ---RFLH---CTEKDLIPYLEKLSDSTL 1173 Query 62 KDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVY 121 K+ L G H GL +R+LVE LF+ IQV+V++ +L WG+N+ AH VII T Y Sbjct 1174 KETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTLYY 1233 Query 122 LPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 + A+ + D+LQM+G A RP D G +++ Q S+ F+ + LP+ES + Sbjct 1234 NGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHL 1292 > ath:AT1G20960 emb1507 (embryo defective 1507); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / nucleoside-triphosphatase/ nucleotide binding; K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2171 Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 125/179 (69%), Positives = 148/179 (82%), Gaps = 0/179 (0%) Query 3 AGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLK 62 AGK+QVLIFVHSRKE KTA+ I D A+ DTL RFL+ S +R++L + + VK DLK Sbjct 740 AGKHQVLIFVHSRKETSKTARAIRDTAMANDTLSRFLKEDSVTRDVLHSHEDIVKNSDLK 799 Query 63 DLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYL 122 D+LPYGFA+HHAGL R DR++VE LF+ H+QVLVSTATLAWGVNLPAHTVIIKGTQVY Sbjct 800 DILPYGFAIHHAGLSRGDREIVETLFSQGHVQVLVSTATLAWGVNLPAHTVIIKGTQVYN 859 Query 123 PEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMI 181 PEKGAW ELSP+D++QM+GRAGRPQYD G I+IT +SELQ+YLSL N+QLPIESQ I Sbjct 860 PEKGAWMELSPLDVMQMLGRAGRPQYDQHGEGIIITGYSELQYYLSLMNEQLPIESQFI 918 Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 4/178 (2%) Query 4 GKNQVLIFVHSRKEAVKTA-KFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLK 62 K ++FV +RK TA + + + P FL E L E ++ + LK Sbjct 1581 NKKPAIVFVPTRKHVRLTAVDLMAYSHMDNPQSPDFLL---GKLEELDPFVEQIREETLK 1637 Query 63 DLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYL 122 + L +G H GL D+++V LF IQV V +++L WG L AH V++ GTQ Y Sbjct 1638 ETLCHGIGYLHEGLSSLDQEIVTQLFEAGRIQVCVMSSSLCWGTPLTAHLVVVMGTQYYD 1697 Query 123 PEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 + + S+ D+LQMMGRA RP D G ++ ++Y + P+ESQ+ Sbjct 1698 GRENSHSDYPVPDLLQMMGRASRPLLDNAGKCVIFCHAPRKEYYKKFLYEAFPVESQL 1755 > ath:AT2G42270 U5 small nuclear ribonucleoprotein helicase, putative Length=2172 Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 122/179 (68%), Positives = 146/179 (81%), Gaps = 0/179 (0%) Query 3 AGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLK 62 AGK+QVLIFVHSRKE KTA+ I D A+ DTL RFL+ S SREIL+ A +K DLK Sbjct 741 AGKHQVLIFVHSRKETAKTARAIRDTAMANDTLSRFLKEDSQSREILKCLAGLLKNNDLK 800 Query 63 DLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYL 122 +LLPYGFA+HHAGL RTDR++VE+ F ++QVL+STATLAWGVNLPAHTVIIKGTQVY Sbjct 801 ELLPYGFAIHHAGLTRTDREIVENQFRWGNLQVLISTATLAWGVNLPAHTVIIKGTQVYN 860 Query 123 PEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMI 181 PE+G W ELSP+D++QM+GRAGRPQYD G I+IT +S+LQ+YL L N+QLPIESQ I Sbjct 861 PERGEWMELSPLDVMQMIGRAGRPQYDQQGEGIIITGYSKLQYYLRLMNEQLPIESQFI 919 Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 4/178 (2%) Query 4 GKNQVLIFVHSRKEAVKTA-KFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLK 62 K ++FV +RK TA I + + P FL + E L+ + + LK Sbjct 1582 NKKPAIVFVPTRKHVRLTAVDLIAYSHMDNMKSPDFLL---GNLEELEPFLIQICEETLK 1638 Query 63 DLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYL 122 + L +G H GL D+++V LF IQV V +++L WG L AH V++ GT Y Sbjct 1639 ETLRHGIGYLHEGLSNLDQEIVTQLFEAGRIQVCVMSSSLCWGTPLKAHLVVVMGTHFYD 1698 Query 123 PEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 + + S+ ++LQMMGR RP D G ++ ++Y + LP+ES + Sbjct 1699 GRENSHSDYPISNLLQMMGRGSRPLLDDAGKCVIFCHAPRKEYYKKFLYEALPVESHL 1756 > tpv:TP03_0747 ATP-dependent RNA helicase; K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2249 Score = 249 bits (635), Expect = 5e-66, Method: Composition-based stats. Identities = 113/178 (63%), Positives = 146/178 (82%), Gaps = 1/178 (0%) Query 4 GKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKD 63 G+ QVL+FVHSRKE +T+K I D + +D L F++ ASREIL +E+E +K +LK+ Sbjct 743 GEKQVLVFVHSRKETYRTSKMILDKIVSEDKLELFIKDV-ASREILTSESEHIKNSNLKE 801 Query 64 LLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLP 123 LLP+G +HHAGL R+DRKLVEDLF+D+H+Q+LVSTATL+WGVNLPA VIIKGTQ+Y+P Sbjct 802 LLPFGIGIHHAGLVRSDRKLVEDLFSDKHLQLLVSTATLSWGVNLPAGVVIIKGTQIYVP 861 Query 124 EKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMI 181 E+G+W EL P+ + QMMGRAGRPQ+DT G I+IT + +LQ+YLSLNNQQLPIESQ+I Sbjct 862 EQGSWDELCPLSVQQMMGRAGRPQFDTFGKGIIITANEKLQYYLSLNNQQLPIESQLI 919 Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query 73 HAGLPRTDRKLVEDLFA-DRHIQVLVSTATLAWGVNLPAHTVII 115 + G + +LVE LFA D +VL+ T+ + W +N+ VI+ Sbjct 1740 YEGFSEDEVELVESLFAKDPRYRVLIVTSQVLWNLNIKCPYVIV 1783 > pfa:PFD1060w U5 small nuclear ribonucleoprotein-specific protein, putative; K01509 adenosinetriphosphatase [EC:3.6.1.3] Length=2874 Score = 242 bits (618), Expect = 5e-64, Method: Composition-based stats. Identities = 114/182 (62%), Positives = 139/182 (76%), Gaps = 0/182 (0%) Query 1 ECAGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQD 60 E AGKNQ+LIFVHSRKE +T+K + D ++ D L +FL S EIL +E E V ++ Sbjct 1035 EEAGKNQILIFVHSRKETYRTSKLLIDRFMKSDNLSKFLIDKKISSEILLSEKEHVINEE 1094 Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 LK++LP+GF +HHAGL R DRKLVEDLF+DRHIQVLV T+TLAWG+NLPAHTVIIKGT V Sbjct 1095 LKEILPFGFGIHHAGLKRLDRKLVEDLFSDRHIQVLVCTSTLAWGINLPAHTVIIKGTSV 1154 Query 121 YLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 Y G + ELS MD+LQM+GR+GRPQYD G AI+IT H LQ YLSLNN+QL IES + Sbjct 1155 YNINIGDFDELSSMDVLQMVGRSGRPQYDKSGKAIIITDHKNLQLYLSLNNEQLFIESTL 1214 Query 181 IQ 182 + Sbjct 1215 LH 1216 Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 0/120 (0%) Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 L+ + G H + ++K+VE LF + IQ+L+ + + +N+ A+ VII T + Sbjct 2299 LRQFMKKGICYLHNNMTEIEKKIVEILFDKKTIQILIVSYDYIYSLNVYANNVIILDTII 2358 Query 121 YLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 + S +IL+M+ AGR DT + T ++ ++Y + + L +ES + Sbjct 2359 THFHNNKEEDYSIQNILEMISYAGRQNEDTKAFVYIYTYITKKEYYKNFIYEPLTVESNI 2418 > cpv:cgd5_2960 U5snrp Brr2 SFII RNA helicase (sec63 and the second part of the RNA Length=1204 Score = 233 bits (593), Expect = 4e-61, Method: Composition-based stats. Identities = 107/177 (60%), Positives = 138/177 (77%), Gaps = 1/177 (0%) Query 6 NQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQ-SFSASREILQAEAEAVKTQDLKDL 64 +Q+L+FVHSRK+ + TAK+I D A + L F + + SREI+ E +K+ +LK++ Sbjct 763 HQILVFVHSRKDTIHTAKYIRDTATENGMLNLFFSGNNNVSREIILDEVNNIKSNNLKEI 822 Query 65 LPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPE 124 LP G +HHAGL R+DRK+VEDLF+D HI+VLV+TATLAWGVNLPAHTVIIKGTQ+Y PE Sbjct 823 LPCGIGIHHAGLVRSDRKVVEDLFSDGHIKVLVTTATLAWGVNLPAHTVIIKGTQIYQPE 882 Query 125 KGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMI 181 +G W+ELSP+D+LQM+GR GRPQYD GH ++IT L +YLSL NQQL IESQ+I Sbjct 883 RGEWTELSPLDMLQMIGRGGRPQYDNNGHGVVITDFDHLTYYLSLLNQQLNIESQLI 939 > sce:YER172C BRR2, PRP44, RSS1, SLT22, SNU246; Brr2p (EC:3.6.1.-); K12854 pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13] Length=2163 Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 100/176 (56%), Positives = 131/176 (74%), Gaps = 0/176 (0%) Query 6 NQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLL 65 NQ+++FVHSRKE +TA ++ + +++ + ++ + S++IL+ EA V L+ L+ Sbjct 738 NQIIVFVHSRKETSRTATWLKNKFAEENITHKLTKNDAGSKQILKTEAANVLDPSLRKLI 797 Query 66 PYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEK 125 G HHAGL R+DR L EDLFAD +QVLV TATLAWGVNLPAHTVIIKGT VY PEK Sbjct 798 ESGIGTHHAGLTRSDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSPEK 857 Query 126 GAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMI 181 G+W +LSP D+LQM+GRAGRP+YDT G I+IT S +Q+YLS+ NQQLPIESQ + Sbjct 858 GSWEQLSPQDVLQMLGRAGRPRYDTFGEGIIITDQSNVQYYLSVLNQQLPIESQFV 913 Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 79/182 (43%), Gaps = 15/182 (8%) Query 3 AGKNQVLIFVHSRKEAVKTA----KFICDAALQKDTLPRFLQSFSASREILQAEAEAVKT 58 +N +F+ SRK+ ++ A KF A++ D L + E + E + Sbjct 1576 GNRNSSSVFLPSRKDCMEVASAFMKF--SKAIEWDML-------NVEEEQIVPYIEKLTD 1626 Query 59 QDLKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGT 118 L+ L +G + + G+ D ++V+ L+ + VL+ + + VII GT Sbjct 1627 GHLRAPLKHGVGILYKGMASNDERIVKRLYEYGAVSVLLISKDCS-AFACKTDEVIILGT 1685 Query 119 QVYLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIES 178 +Y + + + ++L+M+G A G +++T H+ +Y + LP ES Sbjct 1686 NLYDGAEHKYMPYTINELLEMVGLASGND-SMAGKVLILTSHNMKAYYKKFLIEPLPTES 1744 Query 179 QM 180 + Sbjct 1745 YL 1746 > ath:AT5G61140 DEAD box RNA helicase, putative; K01529 [EC:3.6.1.-] Length=2146 Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 87/176 (49%), Positives = 118/176 (67%), Gaps = 0/176 (0%) Query 6 NQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLL 65 +Q +IFVHSRK+ KTA+ + D A Q +TL F ++++ + + +DL Sbjct 746 HQAMIFVHSRKDTSKTAEKLVDLARQYETLDLFTNETHPQFQLMKKDVMKSRNKDLVKFF 805 Query 66 PYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEK 125 GF +HHAG+ R+DR L E LF+D ++VLV TATLAWGVNLPAHTV+IKGTQ+Y + Sbjct 806 EAGFGIHHAGMLRSDRTLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDAKA 865 Query 126 GAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMI 181 G W +L +D++Q+ GRAGRPQ+D G I+IT H +L +YL L QLPIESQ I Sbjct 866 GGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLPIESQFI 921 Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 78/173 (45%), Positives = 103/173 (59%), Gaps = 3/173 (1%) Query 8 VLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLPY 67 VLIFV SR++ TA + A D PR Q S S E LQ + Q+L+ L + Sbjct 1576 VLIFVSSRRQTRLTALDLIQFA-ASDEHPR--QFLSVSEEDLQMVLSQITDQNLRHTLQF 1632 Query 68 GFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGA 127 G +HHAGL DR VE+LF + IQVLVST+TLAWGVNLPAH VIIKGT+ + + Sbjct 1633 GIGLHHAGLNDHDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKGTEYFDGKTKR 1692 Query 128 WSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 + + +ILQMMGRAGRPQ+D G A+++ + FY + P+ES + Sbjct 1693 YVDFPLTEILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESSL 1745 > hsa:10973 ASCC3, ASC1p200, DJ467N11.1, HELIC1, MGC26074, RNAH, dJ121G13.4; activating signal cointegrator 1 complex subunit 3; K01529 [EC:3.6.1.-] Length=2202 Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 81/177 (45%), Positives = 123/177 (69%), Gaps = 0/177 (0%) Query 6 NQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLL 65 +QV++FVH+R V+TA + + A +P F + + + + + + + +++L Sbjct 716 HQVMVFVHARNATVRTAMSLIERAKNCGHIPFFFPTQGHDYVLAEKQVQRSRNKQVRELF 775 Query 66 PYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEK 125 P GF++HHAG+ R DR LVE+LF++ HI+VLV TATLAWGVNLPAH VIIKGTQ+Y ++ Sbjct 776 PDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKR 835 Query 126 GAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMIQ 182 G++ +L +D++Q+ GRAGRPQ+D G I+IT H +L YL+L Q+ PIESQ ++ Sbjct 836 GSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQRNPIESQFLE 892 Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 72/175 (41%), Positives = 105/175 (60%), Gaps = 5/175 (2%) Query 8 VLIFVHSRKEAVKTA-KFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLP 66 VLIFV SR++ TA + I A ++D P+ Q + ++ V+ +LK L Sbjct 1558 VLIFVSSRRQTRLTALELIAFLATEED--PK--QWLNMDEREMENIIATVRDSNLKLTLA 1613 Query 67 YGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKG 126 +G +HHAGL DRK VE+LF + +QVL++T+TLAWGVN PAH VIIKGT+ Y + Sbjct 1614 FGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTR 1673 Query 127 AWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMI 181 + + D+LQMMGRAGRPQ+D G A+++ + FY + P+ES ++ Sbjct 1674 RYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLL 1728 > mmu:77987 Ascc3, ASC1p200, B630009I04Rik, BC023451, D430001L07Rik, D630041L21, Helic1, RNAH; activating signal cointegrator 1 complex subunit 3; K01529 [EC:3.6.1.-] Length=2198 Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 81/177 (45%), Positives = 120/177 (67%), Gaps = 0/177 (0%) Query 6 NQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLL 65 +QV++FVH+R V+TA + + A + FL + + + + + +++L Sbjct 717 HQVMVFVHARNATVRTAMSLIERAKNSGQISCFLPTEGPEYGHALKQVQKSRNKQVRELF 776 Query 66 PYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEK 125 GF++HHAG+ R DR LVE+LF++ HI+VLV TATLAWGVNLPAH V+IKGTQ+Y ++ Sbjct 777 SDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQIYAAKR 836 Query 126 GAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMIQ 182 G++ +L +D++Q+ GRAGRPQ+D G I+IT H +L YLSL QQ PIESQ ++ Sbjct 837 GSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLSLLTQQNPIESQFLE 893 Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 72/175 (41%), Positives = 105/175 (60%), Gaps = 5/175 (2%) Query 8 VLIFVHSRKEAVKTA-KFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLP 66 VLIFV SR++ TA + I A ++D P+ Q + + + V+ +LK L Sbjct 1559 VLIFVSSRRQTRLTALELIAFLATEED--PK--QWLNMDEQEMDNIIGTVRDSNLKLTLA 1614 Query 67 YGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKG 126 +G +HHAGL DRK VE+LF + +QVL++T+TLAWGVN PAH VIIKGT+ Y + Sbjct 1615 FGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTR 1674 Query 127 AWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMI 181 + + D+LQMMGRAGRPQ+D G A+++ + FY + P+ES ++ Sbjct 1675 RYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLL 1729 > tgo:TGME49_049810 activating signal cointegrator 1 complex subunit 3, putative (EC:5.99.1.3) Length=2539 Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 83/180 (46%), Positives = 114/180 (63%), Gaps = 12/180 (6%) Query 6 NQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQ--SFSASREILQAEAEAVKTQDLKD 63 +Q L+FVHSR+E V TA+F+ AA + L F+ S+S +L ++A + +++ Sbjct 931 HQALVFVHSRRETVATAEFLVQAAQAQGHLGLFVSQAKASSSYALLASQAHKSRCREVAS 990 Query 64 LLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLP 123 L G A+HHAGL R+DR L E LF TATLAWGVNLPA TVIIKGT VY Sbjct 991 LFSNGVAIHHAGLLRSDRLLAEKLF---------RTATLAWGVNLPARTVIIKGTSVYDS 1041 Query 124 EKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQ-HSELQFYLSLNNQQLPIESQMIQ 182 + G + ++S +D+LQ+ GRAGRPQYDT G A+LIT+ H L Y+ LP+ES+ ++ Sbjct 1042 KSGGFRDISVLDVLQIFGRAGRPQYDTRGSAVLITEGHERLMRYVGQLTHSLPVESKFLE 1101 Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 98/183 (53%), Gaps = 16/183 (8%) Query 9 LIFVHSRKEAVKTAKFICD---------AALQKDTLPRFLQSFSASREILQAEAEAVKTQ 59 L+FV SR++ +TA+ + L D P FS + E+V+ Sbjct 1813 LVFVSSRRQTRRTAQELVSLLHTRHEHATDLFLDVRPEEADEFSQT-------VESVQDA 1865 Query 60 DLKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQ 119 L+ L +G A+HHAGL DR + LF ++VLV+TATLAWG+NLPA V++KGT+ Sbjct 1866 SLRTTLHHGVAIHHAGLSPHDRAVSARLFEKGFVRVLVATATLAWGMNLPARLVVVKGTE 1925 Query 120 VYLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQ 179 Y E + + D+LQM+GRAGRPQ+D+ A++ + FY Q P+ES Sbjct 1926 YYDAETNRYKDFPITDLLQMIGRAGRPQFDSQAVAVIFCHEPKKNFYKRFLYQPFPVESC 1985 Query 180 MIQ 182 ++ Sbjct 1986 LLN 1988 > cel:Y54E2A.6 hypothetical protein; K01529 [EC:3.6.1.-] Length=1798 Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 3/178 (1%) Query 6 NQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLL 65 +QVL+FVH+R K + C A + FL AS + +QA+ ++ + Sbjct 334 HQVLVFVHTRNGTAKLGEAFCARASVLGQMDLFLPKDRASSKYIQADKAINICRNRAQIS 393 Query 66 PY---GFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYL 122 P G +HHAGL R DR L+E FA+ H+ VL TATLAWGVNLPAH V+IKGT V+ Sbjct 394 PLFQRGMGIHHAGLCRQDRILMERCFAEGHVSVLFCTATLAWGVNLPAHAVVIKGTDVFD 453 Query 123 PEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 EKG +++L +D+ Q+ GRAGRPQ++ GH I+IT ++ YL++ Q PIESQ Sbjct 454 AEKGVFTDLGVLDVQQIFGRAGRPQFENEGHGIIITTRDKIDKYLTMLVHQNPIESQF 511 Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 72/177 (40%), Positives = 107/177 (60%), Gaps = 3/177 (1%) Query 5 KNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDL 64 + VLIFV SR++ TA + + ++L E L A A+K ++LK Sbjct 1192 RKPVLIFVSSRRQTRLTALAFVNLLIADHNPKQWLNMDMLELEDLMA---AIKDENLKLT 1248 Query 65 LPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPE 124 LP+G +HHAGL +R +VE LF ++ IQVL++TATLAWG+N PAH VI+KGT+ + + Sbjct 1249 LPFGIGMHHAGLSAHERAIVEQLFIEKKIQVLIATATLAWGINCPAHLVIVKGTEYFDGK 1308 Query 125 KGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMI 181 KG + + D+LQMMGRAGRPQ+D A++ Q ++ FY + P+ES ++ Sbjct 1309 KGKYVDFPVTDVLQMMGRAGRPQFDDSAVAVIYVQDAKKTFYKKFLYEPFPVESSLL 1365 > bbo:BBOV_I001530 19.m02171; helicase Length=1798 Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 74/177 (41%), Positives = 111/177 (62%), Gaps = 8/177 (4%) Query 7 QVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQ---AEAEAVKTQDLKD 63 Q +IFVHSR E TA + + + P + F +R+I Q + + K +++ Sbjct 407 QCIIFVHSRNETSMTANKLIEMIQES---PSHQKLFQPNRDIYQRFHKQLKKSKHDNVER 463 Query 64 LLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLP 123 Y ++HHAG+ R DR +VE++F + I+VLVST+TLAWGVNLPA+ VIIKGT ++ Sbjct 464 FAEYCMSIHHAGMVRRDRDVVENMFKEGLIKVLVSTSTLAWGVNLPANCVIIKGT--FIG 521 Query 124 EKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 G ++ +++ Q+MGRAGRPQ+DT G +LIT+H L Y+ + +QLPIES + Sbjct 522 GLGVDRNINYLELTQIMGRAGRPQFDTSGTGVLITEHKNLNDYIKMQTEQLPIESHL 578 Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 10/173 (5%) Query 8 VLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLPY 67 VL+FV SR++ TA+ LQ S + A ++L + + Sbjct 1274 VLVFVSSRRQTRTTAR----------DFVSLLQVKSLRWTNIDISARPFIDENLNVFVEH 1323 Query 68 GFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGA 127 G +HHAGL +DR +E+++ I+VL++TATLAWGVNLPA VI+KGT+ Y + Sbjct 1324 GIGIHHAGLHDSDRIRIEEMYLKGEIKVLIATATLAWGVNLPAKIVIVKGTEYYDGKTKK 1383 Query 128 WSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 +++ S DILQM+GRAGR +D +A + T+ ++ FY + P ES Sbjct 1384 YADYSVTDILQMVGRAGRRVFDKEAYAYVYTESRKVDFYKAFMFSPFPAESSF 1436 > pfa:PF14_0370 DEAD/DEAH box helicase, putative; K01509 adenosinetriphosphatase [EC:3.6.1.3] Length=2472 Score = 142 bits (357), Expect = 8e-34, Method: Composition-based stats. Identities = 73/176 (41%), Positives = 106/176 (60%), Gaps = 1/176 (0%) Query 7 QVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLP 66 Q +IFV SR E KT +F+ + AL+ + + F+ + +I + ++ +K Sbjct 695 QCIIFVCSRNETNKTIEFLINHALKNNEIEYFVNNVYTDNDIKKKIKKS-NNLYIKQFYE 753 Query 67 YGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKG 126 YG +HHAG+ R+D+ LVE LF + VL T+TLAWGVNLP HTVIIKGT + E G Sbjct 754 YGCTIHHAGMSRSDKILVESLFKKKVFNVLCCTSTLAWGVNLPVHTVIIKGTNYFSSESG 813 Query 127 AWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMIQ 182 ++ +DI Q+ GR GRPQY++ GHAILIT+ ++L Y+ L IES ++ Sbjct 814 KLEDMDILDINQIFGRCGRPQYESHGHAILITERTKLYKYIKLLTNNTVIESNFLK 869 Score = 117 bits (292), Expect = 3e-26, Method: Composition-based stats. Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 0/135 (0%) Query 48 ILQAEAEAVKTQDLKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVN 107 + Q ++ + LK++L YG +HHAGL D+ +VE LF ++ IQ+L+ T+TLAWG+N Sbjct 1794 LFQNYLNLIENEHLKEILKYGIGIHHAGLNENDKTIVEYLFLNKIIQILICTSTLAWGIN 1853 Query 108 LPAHTVIIKGTQVYLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYL 167 LPA+ VIIKG + Y + + ++ D+LQM+GRAGRPQ+D AIL+ Q Sbjct 1854 LPAYLVIIKGNEFYDAKTKKYKDIPYTDLLQMIGRAGRPQFDDKALAILLVQEKRKNAIK 1913 Query 168 SLNNQQLPIESQMIQ 182 + + IES +++ Sbjct 1914 NFLYHPMNIESNIME 1928 > tpv:TP01_0582 RNA helicase Length=1764 Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 113/178 (63%), Gaps = 6/178 (3%) Query 3 AGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLK 62 +GK Q ++FVHSR E TA I + + + F + ++ + ++ ++ +LK Sbjct 363 SGK-QCMVFVHSRNETFTTASRIVEMINRSEKSDLFQPDLA---QVKRFSSQLMRRNNLK 418 Query 63 DLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYL 122 L Y ++HHAGL ++DR LVE++F ++VLV T+TLAWGVNLPAH+VIIKGT ++ Sbjct 419 LLSDYSISIHHAGLSKSDRDLVEEMFKSGLVKVLVCTSTLAWGVNLPAHSVIIKGT--FI 476 Query 123 PEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 G ++ +++ Q+MGRAGRPQ+D G IL+T H L Y+ + +++PIESQ+ Sbjct 477 GGVGVDRNINNLELNQIMGRAGRPQFDVEGKGILLTDHKNLYSYVRMQTERVPIESQL 534 Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/176 (38%), Positives = 100/176 (56%), Gaps = 11/176 (6%) Query 7 QVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLP 66 VLIFV SR++ TA+ + L + SFS + + + E + T +P Sbjct 1222 NVLIFVSSRRQTRMTAQDLVGL------LQFYNISFSNTNDTYFFDDEWLNT-----FVP 1270 Query 67 YGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKG 126 G +HHAGL DR+LV+DLF + ++VL++T+TLAWGVNLPA VIIKGT+ Y Sbjct 1271 NGIGIHHAGLSTKDRELVQDLFLNGKLKVLIATSTLAWGVNLPAKIVIIKGTEFYDGRVK 1330 Query 127 AWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMIQ 182 + + S DI+QM+GRAGR YD +A + T+ ++ FY + P ES ++ Sbjct 1331 RYIDYSATDIIQMVGRAGRNIYDGEAYAYVFTETRKVGFYKAFMFTPFPTESFFLE 1386 > sce:YGR271W SLH1; Putative RNA helicase related to Ski2p, involved in translation inhibition of non-poly(A) mRNAs; required for repressing propagation of dsRNA viruses (EC:3.6.1.-); K01529 [EC:3.6.1.-] Length=1967 Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 77/172 (44%), Positives = 99/172 (57%), Gaps = 2/172 (1%) Query 9 LIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLPYG 68 LIFV SR++ TA + +D RFL E LQ V LK L +G Sbjct 1373 LIFVASRRQTRLTALDLIHLCGMEDNPRRFLNI--DDEEELQYYLSQVTDDTLKLSLQFG 1430 Query 69 FAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGAW 128 +HHAGL + DR + LF IQ+L++T+TLAWGVNLPAH VIIKGTQ + + + Sbjct 1431 IGLHHAGLVQKDRSISHQLFQKNKIQILIATSTLAWGVNLPAHLVIIKGTQFFDAKIEGY 1490 Query 129 SELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 ++ DILQMMGRAGRP YDT G AI+ T+ S+ FY N P+ES + Sbjct 1491 RDMDLTDILQMMGRAGRPAYDTTGTAIVYTKESKKMFYKHFLNVGFPVESSL 1542 Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/179 (44%), Positives = 111/179 (62%), Gaps = 10/179 (5%) Query 7 QVLIFVHSRKEAVKTAKFICDAALQKDTLPRF----LQSFSASREILQAEAEAVKTQDLK 62 QV++FVHSRKE VK+A+ A + F ++ SR +++ + +D+K Sbjct 534 QVMVFVHSRKETVKSARNFIKLAESNHEVDLFAPDPIEKDKYSRSLVKN-----RDKDMK 588 Query 63 DLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYL 122 ++ +GF +HHAG+ R+DR L E +F D I+VL TATLAWGVNLPA VIIKGTQVY Sbjct 589 EIFQFGFGIHHAGMARSDRNLTEKMFKDGAIKVLCCTATLAWGVNLPADCVIIKGTQVYD 648 Query 123 PEKGAWSELSPMDILQMMGRAGRPQYDT-GGHAILITQHSELQFYLSLNNQQLPIESQM 180 +KG + +L D++Q+ GR GRP + + G IL T + L Y+SL QQ PIES+ Sbjct 649 SKKGGFIDLGISDVIQIFGRGGRPGFGSANGTGILCTSNDRLDHYVSLITQQHPIESRF 707 > cpv:cgd2_2770 U5 small nuclear ribonucleoprotein 200kDA helicase, Pre-mRNA splicing helicase BRR2 2 (RNA helicase plus Sec63 domain) Length=2184 Score = 135 bits (339), Expect = 1e-31, Method: Composition-based stats. Identities = 81/218 (37%), Positives = 114/218 (52%), Gaps = 38/218 (17%) Query 1 ECAGKN-QVLIFVHSRKEAVKTAKFI------------------CDAALQK--DTLPRFL 39 +C KN Q L+FVHSR E + TA + C Q+ ++ + Sbjct 532 DCLEKNEQALVFVHSRNETLSTALYFKRMLNIHSIKSSFNRGTSCSDNNQEFDGSIKNLI 591 Query 40 QSFSASREILQAEAEAVKTQD-----------------LKDLLPYGFAVHHAGLPRTDRK 82 + + E V ++ +KDL +G +HHAGL + RK Sbjct 592 KKKTIGNHFSTDEMNKVNKKEFSGNYLLKALRDCDNSSIKDLFNFGLGIHHAGLISSQRK 651 Query 83 LVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGAWSELSPMDILQMMGR 142 L E LF+ I+VL++TATLAWGVNLPA VIIKGT VY +KG++ +L +DILQ+ GR Sbjct 652 LSEALFSQGLIRVLITTATLAWGVNLPARHVIIKGTNVYDSKKGSFKDLGILDILQIFGR 711 Query 143 AGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 AGRPQ++ G A +IT ++Q Y+ Q PIESQ+ Sbjct 712 AGRPQFEKLGSAYMITSSDKVQSYVKKLTFQAPIESQL 749 Score = 129 bits (324), Expect = 6e-30, Method: Composition-based stats. Identities = 72/179 (40%), Positives = 101/179 (56%), Gaps = 8/179 (4%) Query 5 KNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQ-----SFSASREILQAEAEAVKTQ 59 K V+IFV SR++ TA + + RF+ SF S L K + Sbjct 1503 KKPVIIFVASRRQTRITAMSLSHMCYCEGQPNRFINTEQKDSFGLS---LAGSIRMAKDK 1559 Query 60 DLKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQ 119 LK L G +HHAGL +DR LVE+LF + IQ++V+T+TLAWGVN PAH IIKGT+ Sbjct 1560 SLKQTLESGIGIHHAGLSESDRNLVENLFLNGMIQIVVATSTLAWGVNFPAHFAIIKGTE 1619 Query 120 VYLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIES 178 + + G + + D+LQM+GR+GRPQYD+ A ++T ++ FY LP+ES Sbjct 1620 YFDAKLGQYIDYPITDVLQMVGRSGRPQYDSHSVACIMTLEAKKPFYKRFLYDSLPLES 1678 > mmu:330149 Hfm1, A330009G12Rik, Gm1046, Sec63d1; HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) Length=1434 Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/173 (40%), Positives = 99/173 (57%), Gaps = 10/173 (5%) Query 8 VLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLPY 67 L+F +RK + A + L KD +F+ S LQ A +++ LKD L Y Sbjct 528 TLVFCSTRKGVQQAA-----SVLVKDA--KFIISVEQKLR-LQKSAYSIRDSKLKDTLVY 579 Query 68 GFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGA 127 G HHAG+ +DRKLVE LF + VL +T+TLA G+N+PAH V+IK T Y G Sbjct 580 GVGYHHAGMELSDRKLVEGLFTSGDLPVLFTTSTLAMGMNMPAHLVVIKSTMHY--SGGV 637 Query 128 WSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 + E S DILQM+GRAGRPQ+DT A+++T+ S + Y+ + +ES + Sbjct 638 FEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTREKYVQMLACNDTVESSL 690 > ath:AT3G27730 RCK; RCK (ROCK-N-ROLLERS); ATP binding / ATP-dependent helicase/ DNA helicase Length=1133 Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/176 (39%), Positives = 97/176 (55%), Gaps = 7/176 (3%) Query 9 LIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLPY- 67 L+F +RK A + A+ + A+ + F SRE L+ EA K + Y Sbjct 278 LVFCSTRKGAQEAAQKLAQTAMTYG----YSNPFIKSREQLERLREASPMCSDKQMQSYI 333 Query 68 --GFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEK 125 G H+ GL + DR LVE LF + IQV+ +T TLA G+NLPAHTV+IK TQ + EK Sbjct 334 LQGVGYHNGGLCQKDRSLVEGLFLNGDIQVICTTNTLAHGINLPAHTVVIKSTQHFNKEK 393 Query 126 GAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQMI 181 G + E +LQM GRAGRP +D G I++T+ + Y +L N +ESQ++ Sbjct 394 GHYMEYDRSTLLQMSGRAGRPPFDDTGMVIIMTRRETVHLYENLLNGCEVVESQLL 449 > hsa:164045 HFM1, FLJ36760, FLJ39011, MER3, MGC163397, RP11-539G11.1, SEC63D1, Si-11, Si-11-6, helicase; HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) (EC:3.6.4.12) Length=1435 Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 101/173 (58%), Gaps = 10/173 (5%) Query 8 VLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLPY 67 L+F +RK + A + L KD +F+ + ++ LQ A +V+ L+D+L Sbjct 530 TLVFCATRKGVQQAA-----SVLVKDA--KFIMTVE-QKQRLQKYAYSVRDSKLRDILKD 581 Query 68 GFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGA 127 G A HHAG+ +DRK+VE F + VL +T+TLA GVNLPAH V+IK T Y G Sbjct 582 GAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHY--AGGL 639 Query 128 WSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 + E S DILQM+GRAGRPQ+DT A+++T+ S Y+ + + +ES + Sbjct 640 FEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTRDKYIQMLACRDTVESSL 692 > dre:557052 hfm1, si:ch211-83f14.5; HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) Length=1228 Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/152 (40%), Positives = 92/152 (60%), Gaps = 10/152 (6%) Query 8 VLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLPY 67 L+F +RK ++A + L KD RF+ S + +++ A ++ L+DL Y Sbjct 436 TLVFCSTRKGVQQSA-----SVLAKDA--RFIMSIDHKQRLVKY-ANSLLDAKLRDLFVY 487 Query 68 GFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGA 127 G HHAG+ +DRK+ E+ F + VL +T+TLA GVN+PAH V+IK T Y+ GA Sbjct 488 GIGYHHAGMDVSDRKITENAFTVGDLPVLFTTSTLAMGVNMPAHLVVIKSTMHYV--GGA 545 Query 128 WSELSPMDILQMMGRAGRPQYDTGGHAILITQ 159 E S D+LQM+GRAGRPQ+DT A+++T+ Sbjct 546 CEEYSEADLLQMIGRAGRPQFDTTATAVIMTR 577 > sce:YGL251C HFM1, MER3; Hfm1p (EC:3.6.1.-); K01529 [EC:3.6.1.-] Length=1187 Score = 102 bits (254), Expect = 7e-22, Method: Composition-based stats. Identities = 66/178 (37%), Positives = 94/178 (52%), Gaps = 16/178 (8%) Query 3 AGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLK 62 A VLIF +R + TAKF+ + + FS S++ + L Sbjct 369 ADNRPVLIFCPTRASTISTAKFLLNNHI-----------FSKSKKRCNHNPS---DKILN 414 Query 63 DLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYL 122 + + G A HHAG+ DR VE F I +L ST+TLA GVNLPA+ VIIKGT+ + Sbjct 415 ECMQQGIAFHHAGISLEDRTAVEKEFLAGSINILCSTSTLAVGVNLPAYLVIIKGTKSW- 473 Query 123 PEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLPIESQM 180 E S +D+LQM+GRAGRPQ++T G A+++T Q Y +L + +ES + Sbjct 474 -NSSEIQEYSDLDVLQMIGRAGRPQFETHGCAVIMTDSKMKQTYENLIHGTDVLESSL 530 > ath:AT4G32700 DNA-directed DNA polymerase family protein; K02349 DNA polymerase theta subunit [EC:2.7.7.7] Length=2154 Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 11/174 (6%) Query 6 NQVLIFVHSRKEAVKTA----KFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDL 61 N VLIF SRK TA K I + + D ++ + L+ V L Sbjct 770 NSVLIFCSSRKGCESTARHISKLIKNVPVNVDGENSEFMDIRSAIDALRRSPSGVDPV-L 828 Query 62 KDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVY 121 ++ LP G A HHAGL +R++VE + ++VL +T+TLA GVNLPA VI + + Sbjct 829 EETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPMI- 887 Query 122 LPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQLP 175 + QM GRAGR DT G ++LI + EL+ ++L N+ P Sbjct 888 -----GRDFIDGTRYKQMSGRAGRTGIDTKGDSVLICKPGELKRIMALLNETCP 936 > mmu:191578 Helq, AU021725, D430018E21Rik, Hel308, MGC105224; helicase, POLQ-like (EC:3.6.4.12) Length=1069 Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 7/162 (4%) Query 8 VLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLPY 67 L+F S+K A+ +C L KD L + + L+ LK +P+ Sbjct 539 CLVFCPSKKNCENVAEMLCKF-LSKDYLNHREKEKCEVIKSLRNIGNGKVCPVLKRTVPF 597 Query 68 GFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGA 127 G A HH+GL +RKL+E+ ++ + +L T+TLA GVNLPA VI++ V A Sbjct 598 GIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYV------A 651 Query 128 WSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSL 169 + L QM+GRAGR DT G +IL+ Q + Q L L Sbjct 652 NTFLKRNQYKQMVGRAGRAGIDTAGESILLLQEKDKQQVLEL 693 > dre:100330111 mutagen-sensitive 308-like Length=1010 Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 81/161 (50%), Gaps = 15/161 (9%) Query 8 VLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLL-- 65 LIF ++K A IC L K+ F++ A + IL E ++ L +L Sbjct 501 CLIFCATKKNCENLAGMIC-KYLNKE----FIKHKEAEKAILLGELKSSGNGSLCPVLQK 555 Query 66 --PYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLP 123 P+G A HH+GL +RKLVE+ ++ + +L T+TLA G+NLPA VI++ V Sbjct 556 TIPFGLAYHHSGLTSDERKLVEEAYSSGVLCLLTCTSTLAAGINLPARRVILRSPYV--- 612 Query 124 EKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQ 164 A L QM+GRAGR D G +ILI Q ++ Sbjct 613 ---AADFLKRSQYKQMVGRAGRAGIDAMGESILILQDKDIN 650 > dre:562952 helq, hel308, si:ch211-85e10.2; helicase, POLQ-like Length=1010 Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 81/161 (50%), Gaps = 15/161 (9%) Query 8 VLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLL-- 65 LIF ++K A IC L K+ F++ A + IL E ++ L +L Sbjct 501 CLIFCATKKNCENLAGMIC-KYLNKE----FIKHKEAEKAILLGELKSSGNGSLCPVLQK 555 Query 66 --PYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLP 123 P+G A HH+GL +RKLVE+ ++ + +L T+TLA G+NLPA VI++ V Sbjct 556 TIPFGLAYHHSGLTSDERKLVEEAYSSGVLCLLTCTSTLAAGINLPARRVILRSPYV--- 612 Query 124 EKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQ 164 A L QM+GRAGR D G +ILI Q ++ Sbjct 613 ---AADFLKRSQYKQMVGRAGRAGIDAMGESILILQDKDIN 650 > hsa:10721 POLQ, DKFZp781A0112, POLH, PRO0327; polymerase (DNA directed), theta (EC:2.7.7.7); K02349 DNA polymerase theta subunit [EC:2.7.7.7] Length=2590 Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 12/105 (11%) Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 L+ +P+G A HHAGL +R ++E F I+VL +T+TL+ GVNLPA VII+ Sbjct 405 LQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR---- 460 Query 121 YLPEKGAWSELSPMDIL---QMMGRAGRPQYDTGGHAILITQHSE 162 P G P+DIL QM+GRAGR DT G +ILI ++SE Sbjct 461 -TPIFGG----RPLDILTYKQMVGRAGRKGVDTVGESILICKNSE 500 > hsa:113510 HELQ, HEL308, MGC20604; helicase, POLQ-like (EC:3.6.4.12) Length=1101 Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 7/162 (4%) Query 8 VLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLPY 67 L+F S+K A+ IC L K+ L + + L+ LK +P+ Sbjct 580 CLVFCPSKKNCENVAEMIC-KFLSKEYLKHKEKEKCEVIKNLKNIGNGNLCPVLKRTIPF 638 Query 68 GFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGA 127 G A HH+GL +RKL+E+ ++ + + T+TLA GVNLPA VI++ V A Sbjct 639 GVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYV------A 692 Query 128 WSELSPMDILQMMGRAGRPQYDTGGHAILITQHSELQFYLSL 169 L QM+GRAGR DT G +ILI Q + Q L L Sbjct 693 KEFLKRNQYKQMIGRAGRAGIDTIGESILILQEKDKQQVLEL 734 > cel:Y55B1AL.3 hel-308; HELicase family member (hel-308) Length=923 Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 77/170 (45%), Gaps = 30/170 (17%) Query 5 KNQVLIFVHSRKEAVKTAKFICDAALQKDTLPR------------FLQSFSASREILQAE 52 KN +IF ++K A I TLP FLQS+ + + + + Sbjct 403 KNSAVIFCPNKKNCENVAVLIAK------TLPAHIRQAKRAESDAFLQSYLSDNDDERMD 456 Query 53 AEAVKTQDLKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHT 112 A LK + G A HH+GL + +RK VE F + I V+ +T+TLA GVNLP Sbjct 457 AV------LKQCILSGVAYHHSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRR 510 Query 113 VIIKGTQVYLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSE 162 VIIK V L LQM GRAGR +DT G I I + E Sbjct 511 VIIKAPMV------GRERLGKAQYLQMAGRAGRAGFDTKGDCITIIKAGE 554 > cel:F01G4.3 hypothetical protein; K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1266 Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 4/163 (2%) Query 1 ECAGKNQVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSAS--REILQAEAEAVKT 58 +C+ + +++FV SRK + A+ + L + + ++ F + + + ++ E + Sbjct 558 KCSDQLPMVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQV 617 Query 59 QDLKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGT 118 ++DL GFAVHH+G+ +++VE LF ++++L +T T A GVN+PA V+ Sbjct 618 LTMRDLCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSI 677 Query 119 QVYLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHS 161 + + L+P + QM GRAGR D G I+I + S Sbjct 678 MKH--DGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDS 718 > dre:566079 bZ1P14.5; si:rp71-1p14.5; K02349 DNA polymerase theta subunit [EC:2.7.7.7] Length=2452 Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 13/126 (10%) Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 L+ +P+G A HHAGL +R ++E F +I+VL +T+TL+ GVNLPA VII+ T V Sbjct 552 LQRTVPWGVAFHHAGLTFDERDILEGAFRQGYIRVLAATSTLSSGVNLPARRVIIR-TPV 610 Query 121 YLPEKGAWSELSPMDIL---QMMGRAGRPQYDTGGHAILITQHSELQFYLSLNNQQL-PI 176 + G +DIL QM+GRAGR DT G ++L+ + +E +SL L PI Sbjct 611 F---NGHL-----LDILTYKQMVGRAGRKGVDTIGESVLVCKEAERAKGMSLIQGSLKPI 662 Query 177 ESQMIQ 182 S +++ Sbjct 663 SSCLVK 668 > cel:W03A3.2 polq-1; POLQ (DNA polymerase theta) homolog family member (polq-1); K02349 DNA polymerase theta subunit [EC:2.7.7.7] Length=1661 Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 6/111 (5%) Query 52 EAEAVKTQDLKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAH 111 E K +++ L +G A HHAGL +R+ +E F +++I +LV+T+TLA GVNLPA Sbjct 306 ERNGCKDRNVMSTLAWGVAYHHAGLTMEERECIELGFREKNIVILVATSTLASGVNLPAE 365 Query 112 TVIIKGTQVYLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSE 162 V+IK +G S L+ ++ QM+GRAGR + T G L+ + + Sbjct 366 RVLIKAQP-----RGP-SALTSLNYRQMVGRAGRTGHATRGETYLLIKKCD 410 > sce:YLR398C SKI2; Ski complex component and putative RNA helicase, mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay (EC:3.6.1.-); K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1287 Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 10/161 (6%) Query 8 VLIFVHSRKEAVKTAKFI-----CDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLK 62 +++FV S+K + A ++ C+ +K + F++ S +R + + + + + + Sbjct 629 MVVFVFSKKRCEEYADWLEGINFCNNK-EKSQIHMFIEK-SITR-LKKEDRDLPQILKTR 685 Query 63 DLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYL 122 LL G AVHH GL ++L+E LF+ I+VL +T T A G+NLP TVI + + Sbjct 686 SLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSSIRKH- 744 Query 123 PEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHSEL 163 + EL+P + QM GRAGR D+ G I++ +S L Sbjct 745 -DGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPL 784 > ath:AT1G59760 ATP-dependent RNA helicase, putative; K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=988 Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 87/158 (55%), Gaps = 10/158 (6%) Query 8 VLIFVHSRKE----AVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAV-KTQDLK 62 V++F S+KE A++ +K + ++ +KD + F+++ ++L + + + + ++ Sbjct 323 VILFSFSKKECEALAMQMSKMVLNSDDEKDAVETI---FASAIDMLSDDDKKLPQVSNIL 379 Query 63 DLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYL 122 +L G VHH+GL ++++E LF + I+ L +T T + G+N+PA TV+ + + Sbjct 380 PILKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFD 439 Query 123 PEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQH 160 +K W LS + +QM GRAGR D G IL+ Sbjct 440 GDKFRW--LSSGEYIQMSGRAGRRGIDKRGICILMVDE 475 > tpv:TP04_0364 hypothetical protein; K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1069 Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 17/166 (10%) Query 1 ECAGKNQVLIFVHSRKEAVKTAKFICDAAL-----QKDTLPRFLQSFSASREILQAEAEA 55 E K V++F SR++ + AK + + L Q + FL +E L +E+ Sbjct 419 ESEDKMPVVLFCFSRQKCEQYAKDMPNLNLVYNKVQASKIHLFL------KESLDGLSES 472 Query 56 VKT----QDLKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAH 111 + + + +LL G VHH+GL +++VE LF+ I+VL +T T A GVN+PA Sbjct 473 DRNLPQLRKMVNLLTRGIGVHHSGLLPIIKEMVEILFSRGLIKVLFATETFAMGVNMPAR 532 Query 112 TVIIKGTQVYLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILI 157 +V+ T +Y + + L+ + QM GRAGR DT G+ + Sbjct 533 SVVF--TSIYKHDGITYRYLTSSEYTQMAGRAGRRGLDTFGNVYIF 576 > dre:559653 skiv2l, fb70b07, wu:fb70b07; superkiller viralicidic activity 2 (S. cerevisiae homolog)-like; K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1230 Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 8/156 (5%) Query 8 VLIFVHSRKEAVKTAKFICD----AALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKD 63 V+ F SR + A+ + +++K + FLQ S +R + + + + ++D Sbjct 564 VVAFTFSRTRCDENARSLTSLDLTTSIEKSEIHSFLQK-SLTR-LRGGDRQLPQILLMRD 621 Query 64 LLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLP 123 LL G VHH+G+ ++++E LF+ ++VL +T T A GVN+PA TV+ + + Sbjct 622 LLKRGIGVHHSGILPILKEVIEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSIRKH-- 679 Query 124 EKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQ 159 + + L P + +QM GRAGR D G I++ + Sbjct 680 DGTGFRNLLPGEYIQMAGRAGRRGLDATGTVIILCK 715 > cel:W08D2.7 mtr-4; yeast MTR (mRNA TRansport) homolog family member (mtr-4); K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=1026 Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 6/158 (3%) Query 7 QVLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDLKDLLP 66 ++F SRKE A + D KD ++S S I Q E K + ++LP Sbjct 375 NCIVFSFSRKECESYAISLKDMDFNKDHEKGMVKSVYES-AIAQLSPEDQKLPQILNILP 433 Query 67 Y---GFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLP 123 G VHH+GL ++ +E LF + ++VL +T T + G+N+PA TV+ + + Sbjct 434 LLRRGIGVHHSGLMPILKETIEILFGEGLVKVLFATETFSMGLNMPARTVVFTSARKFDG 493 Query 124 EKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQHS 161 + ++ + +QM GRAGR D G IL+ + Sbjct 494 SDNRY--ITSGEYIQMAGRAGRRGKDDRGTVILMVDSA 529 > cel:C28H8.3 hypothetical protein; K01529 [EC:3.6.1.-] Length=1714 Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 9/101 (8%) Query 58 TQDLKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKG 117 TQ L L G HHAGL +R VE LF ++ VL ST+TL+ GVN+P TV+ Sbjct 1271 TQVLLKLFERGIGYHHAGLNTVERGAVEVLFRSGNLAVLFSTSTLSLGVNMPCKTVMFGV 1330 Query 118 TQVYLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILIT 158 + +L+P+ QM GRAGR +D G+ I ++ Sbjct 1331 DTL---------QLTPLLYRQMSGRAGRRGFDHSGNVIFMS 1362 > hsa:6499 SKIV2L, 170A, DDX13, HLP, SKI2, SKI2W, SKIV2; superkiller viralicidic activity 2-like (S. cerevisiae); K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1246 Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 8/156 (5%) Query 8 VLIFVHSRKEAVKTAKFICDAAL----QKDTLPRFLQSFSASREILQAEAEAVKTQDLKD 63 V++F SR + A + L +K + FLQ A + ++ + + + + Sbjct 569 VVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLA--RLRGSDRQLPQVLHMSE 626 Query 64 LLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLP 123 LL G VHH+G+ +++VE LF+ ++VL +T T A GVN+PA TV+ + + Sbjct 627 LLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKH-- 684 Query 124 EKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQ 159 + + +L P + +QM GRAGR D G IL+ + Sbjct 685 DGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK 720 > ath:AT1G70070 EMB25; EMB25 (EMBRYO DEFECTIVE 25); ATP-dependent helicase/ RNA helicase Length=1171 Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 35/170 (20%) Query 4 GKNQV--LIFVHSRKEAVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAE------- 54 GKN + + F+ +R+ CDAA+Q ++++F + ++E E Sbjct 434 GKNMLPAIWFIFNRRG--------CDAAVQ------YVENFQLLDDCEKSEVELALKKFR 479 Query 55 -----AVKTQDLKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLP 109 AV+ K LL G A HHAG + +E+LF ++V+ +T TLA G+N+P Sbjct 480 VLYPDAVRESAEKGLL-RGIAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMP 538 Query 110 AHTVIIKGTQVYLPEKGAWS--ELSPMDILQMMGRAGRPQYDTGGHAILI 157 A T +I L +K EL P ++ QM GRAGR D G+ +L+ Sbjct 539 ARTAVISS----LSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVLV 584 > mmu:108077 Skiv2l, 4930534J06Rik, AW214248, Ddx13, SKI, Ski2w; superkiller viralicidic activity 2-like (S. cerevisiae); K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1244 Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 8/156 (5%) Query 8 VLIFVHSRKEAVKTAKFICDAAL----QKDTLPRFLQSFSASREILQAEAEAVKTQDLKD 63 V++F SR + A + L +K + FLQ A + ++ + + + + Sbjct 566 VVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLA--RLRGSDRQLPQVLHMSE 623 Query 64 LLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLP 123 LL G VHH+G+ +++VE LF+ ++VL +T T A GVN+PA TV+ + + Sbjct 624 LLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKH-- 681 Query 124 EKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQ 159 + + +L P + +QM GRAGR D G IL+ + Sbjct 682 DGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK 717 > ath:AT3G46960 ATP binding / ATP-dependent helicase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding; K12599 antiviral helicase SKI2 [EC:3.6.4.-] Length=1347 Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 2/99 (2%) Query 61 LKDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQV 120 L+ LL G VHHAGL +++VE LF I+VL ST T A GVN PA TV+ + Sbjct 707 LQSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRK 766 Query 121 YLPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILITQ 159 + + + +L P + QM GRAGR D G +++ + Sbjct 767 F--DGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCR 803 > sce:YJL050W MTR4, DOB1; ATP-dependent 3'-5' RNA helicase, involved in nuclear RNA processing and degredation both as a component of the TRAMP complex and in TRAMP independent processes; member of the Dead-box family of helicases (EC:3.6.1.-); K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=1073 Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 8/156 (5%) Query 6 NQVLIFVHSRKE----AVKTAKFICDAALQKDTLPRFLQSFSASREILQAEAEAVKTQDL 61 N V++F S+++ A+K +K ++ +K+ L + + A + + + E + + + Sbjct 407 NPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIAL--LPETDRELPQIKHI 464 Query 62 KDLLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVY 121 LL G +HH+GL ++++E LF + ++VL +T T + G+N+PA TV+ + + Sbjct 465 LPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKW 524 Query 122 LPEKGAWSELSPMDILQMMGRAGRPQYDTGGHAILI 157 ++ W +S + +QM GRAGR D G I++ Sbjct 525 DGQQFRW--VSGGEYIQMSGRAGRRGLDDRGIVIMM 558 > mmu:72198 Skiv2l2, 2610528A15Rik, mKIAA0052; superkiller viralicidic activity 2-like 2 (S. cerevisiae) (EC:3.6.4.13); K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] Length=1040 Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 4/153 (2%) Query 8 VLIFVHSRKEAVKTAKFICDAALQKDTLPRFLQS-FSASREILQAEAEAV-KTQDLKDLL 65 V+IF S+K+ A + D + ++ F+ + + L E + + + + + LL Sbjct 387 VIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLL 446 Query 66 PYGFAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEK 125 G +HH GL ++ +E LF++ I+ L +T T A G+N+PA TV+ + Y + Sbjct 447 KRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKD 506 Query 126 GAWSELSPMDILQMMGRAGRPQYDTGGHAILIT 158 W +S + +QM GRAGR D G IL+ Sbjct 507 FRW--ISSGEYIQMSGRAGRRGMDDRGIVILMV 537 Lambda K H 0.320 0.134 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 4912245712 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40