bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_7110_orf1
Length=121
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_015990 helicase, putative ; K11273 chromosome trans... 76.6 2e-14
cpv:cgd7_3510 helicase ; K11273 chromosome transmission fideli... 57.4 1e-08
hsa:1663 DDX11, CHL1, CHLR1, KRG2, MGC133249, MGC9335; DEAD/H ... 56.2 2e-08
cel:M03C11.2 hypothetical protein; K11273 chromosome transmiss... 56.2 2e-08
dre:492353 zgc:92172 (EC:3.6.4.13); K11273 chromosome transmis... 56.2 3e-08
tpv:TP03_0644 DNA helicase; K11273 chromosome transmission fid... 55.5 4e-08
ath:AT1G79890 helicase-related; K11273 chromosome transmission... 54.3 1e-07
cpv:cgd6_2660 DNA repair helicase ; K11136 regulator of telome... 53.9 1e-07
pfa:MAL13P1.134 DEAD box helicase, putative; K11273 chromosome... 52.4 4e-07
sce:YPL008W CHL1, CTF1, LPA9, MCM12; Chl1p (EC:3.6.1.-); K1127... 52.4 4e-07
mmu:320209 Ddx11, 4732462I11Rik, CHL1, CHLR1, KRG2, MGC90809; ... 52.0 4e-07
mmu:237911 Brip1, 3110009N10Rik, 8030460J03Rik, Bach1, FACJ, F... 50.8 1e-06
ath:AT1G20720 ATP binding / ATP-dependent DNA helicase/ ATP-de... 50.4 1e-06
dre:794038 brip1, fancj, si:ch211-158l18.1; BRCA1 interacting ... 49.3 3e-06
bbo:BBOV_I004620 19.m02044; DNA repair helicase (rad3) and DEA... 49.3 3e-06
hsa:83990 BRIP1, BACH1, FANCJ, FLJ90232, MGC126521, MGC126523,... 48.9 3e-06
ath:AT1G20750 helicase-related 48.9 4e-06
dre:503732 rtel1; zgc:113114 (EC:3.6.4.12); K11136 regulator o... 45.8 3e-05
cel:F33H2.1 dog-1; Deletions Of G-rich DNA family member (dog-1) 45.8 3e-05
tgo:TGME49_009770 DNA repair helicase, putative ; K11136 regul... 45.1 5e-05
tgo:TGME49_031800 hypothetical protein 44.7 8e-05
tpv:TP04_0785 DNA repair helicase; K11136 regulator of telomer... 43.5 1e-04
ath:AT1G79950 helicase-related; K11136 regulator of telomere e... 43.5 2e-04
cel:Y50D7A.2 hypothetical protein; K10844 DNA excision repair ... 42.4 3e-04
hsa:51750 RTEL1, C20orf41, DKFZp434C013, KIAA1088, NHL, RTEL, ... 41.6 5e-04
mmu:269400 Rtel1, AI451565, AW540478, Rtel; regulator of telom... 41.6 6e-04
pfa:PF14_0081 DNA-repair helicase, putative; K11136 regulator ... 39.7 0.003
ath:AT1G03190 UVH6; UVH6 (ULTRAVIOLET HYPERSENSITIVE 6); ATP b... 37.4 0.010
sce:YER171W RAD3, REM1; 5' to 3' DNA helicase, involved in nuc... 37.4 0.013
hsa:2068 ERCC2, COFS2, EM9, MGC102762, MGC126218, MGC126219, T... 36.2 0.026
mmu:13871 Ercc2, AA407812, AU020867, AW240756, Ercc-2, XPD; ex... 36.2 0.028
cel:F25H2.13 rtel-1; RTEL (mammalian Regulator of TELomere len... 34.3 0.10
cpv:cgd7_820 RAD3'DEXDc+HELICc protein' ; K10844 DNA excision ... 33.9 0.13
bbo:BBOV_III008820 17.m07769; DNA repair helicase (rad3) famil... 33.9 0.13
tpv:TP01_0155 DNA repair protein Rad3; K10844 DNA excision rep... 33.1 0.19
tgo:TGME49_016870 excision repair protein rad15, putative ; K1... 33.1 0.21
bbo:BBOV_IV001300 21.m02831; DNA excision repair helicase; K10... 32.0 0.55
pfa:PFA_0210c conserved Plasmodium protein, unknown function 31.2 0.82
hsa:100287029 DDX11L10, DDX11L1, DDX11P; DEAD/H (Asp-Glu-Ala-A... 30.8 1.0
hsa:100507301 hypothetical protein LOC100507301 30.8 1.0
pfa:PFI1650w DNA excision-repair helicase, putative; K10844 DN... 30.4 1.3
mmu:240476 Zfp407, 6430585N13Rik, Gm333, Gm334, Gm948, ZNF407;... 29.6 2.6
tgo:TGME49_040080 transporter, major facilitator family domain... 29.3 3.0
tpv:TP02_0737 ABC transporter 29.3 3.1
pfa:PF13_0089 Inositol polyphosphate kinase, putative 28.5 5.9
bbo:BBOV_III006210 17.m07551; hypothetical protein 28.1 6.4
cel:C10C6.6 hypothetical protein; K14950 cation-transporting A... 28.1 6.6
cel:T08B2.7 hypothetical protein; K07515 enoyl-CoA hydratase /... 27.7 9.1
> tgo:TGME49_015990 helicase, putative ; K11273 chromosome transmission
fidelity protein 1 [EC:3.6.4.13]
Length=1282
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query 24 PKTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMRQHVT 83
P A LFCVM G LSEGVNF D+LARLLV+VGLPFPS +D F+L+ ++ ++ R
Sbjct 1016 PPKAALFCVMNGALSEGVNFHDSLARLLVLVGLPFPSIKDPEFQLRAAFFSSVLERTQ-- 1073
Query 84 SAGAQEARQDSPSEFIGANKQADLHREQQQTQK 116
R +G +++D R ++ K
Sbjct 1074 -------RNADTHASVGEKRESDTTRVEKNVDK 1099
> cpv:cgd7_3510 helicase ; K11273 chromosome transmission fidelity
protein 1 [EC:3.6.4.13]
Length=775
Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYD 74
A LF V+ G LSEGVNFSD L R L+IV LPFP + +F +E+Y++
Sbjct 640 AILFAVLNGTLSEGVNFSDELCRCLIIVSLPFPQKTEMLFS-KERYFN 686
> hsa:1663 DDX11, CHL1, CHLR1, KRG2, MGC133249, MGC9335; DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 11 (EC:3.6.4.13); K11273
chromosome transmission fidelity protein 1 [EC:3.6.4.13]
Length=856
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 0/53 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMR 79
A L V+GG++SEG+NFSD L R +V+VG+PFP+ + + + Y D+ + R
Sbjct 719 ALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPR 771
> cel:M03C11.2 hypothetical protein; K11273 chromosome transmission
fidelity protein 1 [EC:3.6.4.13]
Length=848
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%)
Query 25 KTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIM 77
K A LF V+GG++SEG+NF D L R ++++GLP+P+ R + K+ D M
Sbjct 716 KGAILFAVVGGKMSEGINFCDELGRAVIVIGLPYPNKTSVELRERMKFLDTQM 768
> dre:492353 zgc:92172 (EC:3.6.4.13); K11273 chromosome transmission
fidelity protein 1 [EC:3.6.4.13]
Length=890
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 0/51 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIM 77
A LF V+GG++SEG+NFSD L R +V+VG+P+P+ + + + Y D+ M
Sbjct 752 ALLFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKHM 802
> tpv:TP03_0644 DNA helicase; K11273 chromosome transmission fidelity
protein 1 [EC:3.6.4.13]
Length=740
Score = 55.5 bits (132), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Query 25 KTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTI-FRLQEKYYDE 75
K A LF V GG SEGV+FSD LARL+++VGLP+P D I +L+ +YY++
Sbjct 586 KGAILFAVFGGSQSEGVDFSDDLARLVLLVGLPYPP--DNIKLKLKREYYNK 635
> ath:AT1G79890 helicase-related; K11273 chromosome transmission
fidelity protein 1 [EC:3.6.4.13]
Length=882
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 0/50 (0%)
Query 14 LAEPKEKPLRPKTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQD 63
L + KE + A + V+GG++SEG+NFSD++ R +V+VGLP+PS D
Sbjct 691 LRDYKEAIESERGAIMLAVVGGKVSEGINFSDSMCRCVVMVGLPYPSPSD 740
> cpv:cgd6_2660 DNA repair helicase ; K11136 regulator of telomere
elongation helicase 1
Length=1108
Score = 53.9 bits (128), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 0/61 (0%)
Query 18 KEKPLRPKTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIM 77
K K + + L V G++SEG+NFSD R ++I GLPFPS D L+++Y DE
Sbjct 724 KSKRISSSGSLLIAVCRGKVSEGINFSDNACRGVIIAGLPFPSIADARVCLKKQYMDESK 783
Query 78 M 78
M
Sbjct 784 M 784
> pfa:MAL13P1.134 DEAD box helicase, putative; K11273 chromosome
transmission fidelity protein 1 [EC:3.6.4.13]
Length=1099
Score = 52.4 bits (124), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query 29 LFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFR--LQEKYYDE 75
LFCVM G+LSEG+NF D L R +V+VG+PF + + L+ KYY E
Sbjct 897 LFCVMNGKLSEGINFYDDLCRNVVVVGIPFIKHDSVVDKNLLRLKYYRE 945
> sce:YPL008W CHL1, CTF1, LPA9, MCM12; Chl1p (EC:3.6.1.-); K11273
chromosome transmission fidelity protein 1 [EC:3.6.4.13]
Length=861
Score = 52.4 bits (124), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query 25 KTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMRQHVTS 84
+ + L ++GG+LSEG+NF D L R +V+VGLPFP+ ++ K+ +M+ S
Sbjct 717 RGSLLLAIVGGKLSEGINFQDDLCRAVVMVGLPFPNIFSGELIVKRKHLAAKIMK----S 772
Query 85 AGAQEARQDSPSEFI 99
G +E + EF+
Sbjct 773 GGTEEEASRATKEFM 787
> mmu:320209 Ddx11, 4732462I11Rik, CHL1, CHLR1, KRG2, MGC90809;
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like
helicase homolog, S. cerevisiae) (EC:3.6.4.13); K11273 chromosome
transmission fidelity protein 1 [EC:3.6.4.13]
Length=880
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 0/53 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMR 79
A L V+GG++SEG+NFSD L R +V+VG+P+P+ + + + Y ++ + R
Sbjct 741 ALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLNQTLPR 793
> mmu:237911 Brip1, 3110009N10Rik, 8030460J03Rik, Bach1, FACJ,
Fancj, OF; BRCA1 interacting protein C-terminal helicase 1
(EC:3.6.4.13)
Length=1174
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMRQHVTSAG 86
A L V G++SEG++FSD AR ++ VG+PFP+ +D L+ +Y D H S G
Sbjct 758 ALLIAVCRGKVSEGLDFSDDNARAVITVGIPFPNVKDLQVELKRQYND-----HHSKSRG 812
Query 87 AQEARQ 92
RQ
Sbjct 813 LLPGRQ 818
> ath:AT1G20720 ATP binding / ATP-dependent DNA helicase/ ATP-dependent
helicase/ DNA binding / hydrolase, acting on acid
anhydrides, in phosphorus-containing anhydrides / nucleic acid
binding
Length=1175
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 0/50 (0%)
Query 25 KTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYD 74
K A V G++SEG++F+D AR ++IVG+PFP+ D L++KY D
Sbjct 651 KGAAFLAVCRGKVSEGIDFADDNARAVIIVGIPFPNLHDIQVGLKKKYND 700
> dre:794038 brip1, fancj, si:ch211-158l18.1; BRCA1 interacting
protein C-terminal helicase 1
Length=1217
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 0/49 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDE 75
A L V G++SEG++F+D AR +V +G+PFP+ +D L+ KY D+
Sbjct 788 ALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDK 836
> bbo:BBOV_I004620 19.m02044; DNA repair helicase (rad3) and DEAD_2
domain containing protein; K11273 chromosome transmission
fidelity protein 1 [EC:3.6.4.13]
Length=775
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKY 72
A LF V GG SEGV+F D LARL+++VGLP+P + RL+ Y
Sbjct 625 AILFGVYGGSQSEGVDFHDGLARLVLLVGLPYPP-ETVKLRLRRSY 669
> hsa:83990 BRIP1, BACH1, FANCJ, FLJ90232, MGC126521, MGC126523,
OF; BRCA1 interacting protein C-terminal helicase 1 (EC:3.6.4.13)
Length=1249
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 0/48 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYD 74
A L V G++SEG++FSD AR ++ +G+PFP+ +D L+ +Y D
Sbjct 755 ALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYND 802
> ath:AT1G20750 helicase-related
Length=1179
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query 26 TAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYD 74
+AFL V G++SEG++FSD AR ++IVG+P P+ D + L+ KY D
Sbjct 624 SAFL-AVCRGKVSEGMDFSDDNARAVIIVGIPLPNLGDILVELKRKYND 671
> dre:503732 rtel1; zgc:113114 (EC:3.6.4.12); K11136 regulator
of telomere elongation helicase 1
Length=1177
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query 29 LFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMRQHVT 83
F V G+ SEG++F+D R +VI GLPFP D L+ +Y DE M R ++
Sbjct 618 FFAVCRGKASEGLDFADTYGRGVVITGLPFPPRMDPRVVLKMQYLDE-MCRNKIS 671
> cel:F33H2.1 dog-1; Deletions Of G-rich DNA family member (dog-1)
Length=983
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%), Gaps = 0/49 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDE 75
+ +F V G++SEG++F+D AR+++ VG+P+P+ D ++ Y D+
Sbjct 832 SLMFAVFRGKVSEGIDFADDRARVVISVGIPYPNAMDDQVNAKKLYNDQ 880
> tgo:TGME49_009770 DNA repair helicase, putative ; K11136 regulator
of telomere elongation helicase 1
Length=1649
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 0/71 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMRQHVTSAG 86
A L V G+ +EG++FSD R +VI GLP S + +L+ + D+ M + + G
Sbjct 965 AVLLAVCKGKAAEGIDFSDHACRAVVICGLPLASFFEPRVQLKRMWLDDCMQKLVAETGG 1024
Query 87 AQEARQDSPSE 97
A ++ E
Sbjct 1025 ASRGKEQGTGE 1035
> tgo:TGME49_031800 hypothetical protein
Length=2272
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEI----MMRQHV 82
A + V G++SEG++F+DA R ++ +G+P+P+ +D + K+ D + + +H+
Sbjct 1685 ALMLAVYRGKMSEGLSFNDAYCRGVLCIGIPYPALRDPKIESKMKFNDALHALSLSPEHL 1744
Query 83 TSAGAQEARQD 93
S + A D
Sbjct 1745 LSCASDMATAD 1755
> tpv:TP04_0785 DNA repair helicase; K11136 regulator of telomere
elongation helicase 1
Length=962
Score = 43.5 bits (101), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 0/63 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMRQHVTSAG 86
+ F + GRL+EG++FSD R + + G+P+PS D L+ Y D++ + + S
Sbjct 709 SVFFAICRGRLAEGIDFSDDYCRGIFVCGIPYPSRFDDNTALKMDYLDKLSNKTYEKSNL 768
Query 87 AQE 89
A E
Sbjct 769 ANE 771
> ath:AT1G79950 helicase-related; K11136 regulator of telomere
elongation helicase 1
Length=1040
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 0/49 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDE 75
F V G++SEG++F+D R +VI GLP+ D +L+ ++ DE
Sbjct 633 VVFFAVCRGKVSEGLDFADGAGRAVVITGLPYARVTDPRVKLKREFLDE 681
> cel:Y50D7A.2 hypothetical protein; K10844 DNA excision repair
protein ERCC-2 [EC:3.6.4.12]
Length=606
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 0/46 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKY 72
A LF V G++SEG++FS L R ++++G+P+ T+ + R + +Y
Sbjct 439 AVLFSVARGKVSEGIDFSHHLGRCVIMLGIPYMYTESRVLRARLEY 484
> hsa:51750 RTEL1, C20orf41, DKFZp434C013, KIAA1088, NHL, RTEL,
bK3184A7.3; regulator of telomere elongation helicase 1 (EC:3.6.4.12);
K11136 regulator of telomere elongation helicase
1
Length=1219
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 0/50 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEI 76
A V G+ SEG++FSD R +++ GLP+P D L+ ++ DE+
Sbjct 617 ATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEM 666
> mmu:269400 Rtel1, AI451565, AW540478, Rtel; regulator of telomere
elongation helicase 1 (EC:3.6.4.12); K11136 regulator
of telomere elongation helicase 1
Length=1209
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 0/56 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMRQHV 82
A V G+ SEG++FSD R +++ GLP+P D L+ ++ DE+ R V
Sbjct 617 ATFLAVCRGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMRGRSGV 672
> pfa:PF14_0081 DNA-repair helicase, putative; K11136 regulator
of telomere elongation helicase 1
Length=1160
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 0/50 (0%)
Query 25 KTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYD 74
K A L V G++SEG++F D R ++I GLP+ + D+ ++++ D
Sbjct 702 KGAILMGVCRGKISEGIDFKDDCCRAVIICGLPYGNVYDSKIIFKKEFLD 751
> ath:AT1G03190 UVH6; UVH6 (ULTRAVIOLET HYPERSENSITIVE 6); ATP
binding / ATP-dependent DNA helicase/ ATP-dependent helicase/
DNA binding / hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding; K10844
DNA excision repair protein ERCC-2 [EC:3.6.4.12]
Length=758
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 0/46 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKY 72
A F V G+++EG++F RL+V+ G+PF T I R + +Y
Sbjct 594 AVFFSVARGKVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEY 639
> sce:YER171W RAD3, REM1; 5' to 3' DNA helicase, involved in nucleotide
excision repair and transcription; subunit of RNA
polymerase II transcription initiation factor TFIIH; subunit
of Nucleotide Excision Repair Factor 3 (NEF3); homolog of human
XPD protein (EC:3.6.1.-); K10844 DNA excision repair protein
ERCC-2 [EC:3.6.4.12]
Length=778
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query 8 QQCANGLAEPKEKPLRPKTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFR 67
+ C+NG + A L V G++SEG++F R ++++G+PF T+ I +
Sbjct 588 KACSNG-----------RGAILLSVARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILK 636
Query 68 LQEKYYDE 75
+ ++ E
Sbjct 637 ARLEFMRE 644
> hsa:2068 ERCC2, COFS2, EM9, MGC102762, MGC126218, MGC126219,
TTD, XPD; excision repair cross-complementing rodent repair
deficiency, complementation group 2 (EC:3.6.4.12); K10844 DNA
excision repair protein ERCC-2 [EC:3.6.4.12]
Length=760
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYY-DEIMMRQH 81
A L V G++SEG++F R +++ G+P+ TQ I + + +Y D+ +R++
Sbjct 594 AILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIREN 649
> mmu:13871 Ercc2, AA407812, AU020867, AW240756, Ercc-2, XPD;
excision repair cross-complementing rodent repair deficiency,
complementation group 2 (EC:3.6.4.12); K10844 DNA excision
repair protein ERCC-2 [EC:3.6.4.12]
Length=760
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYY-DEIMMRQH 81
A L V G++SEG++F R +++ G+P+ TQ I + + +Y D+ +R++
Sbjct 594 AILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIREN 649
> cel:F25H2.13 rtel-1; RTEL (mammalian Regulator of TELomere length)
homolog family member (rtel-1); K11136 regulator of telomere
elongation helicase 1
Length=994
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 0/58 (0%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMRQHVTS 84
A L V G++SEG++F DA +R ++I+G+P+P D L++ Y D++M R+ S
Sbjct 634 AALLAVCRGKVSEGIDFCDAESRAVIIIGIPYPPIHDERVVLKKMYLDDLMGRKDTKS 691
> cpv:cgd7_820 RAD3'DEXDc+HELICc protein' ; K10844 DNA excision
repair protein ERCC-2 [EC:3.6.4.12]
Length=841
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFR-----LQEKY 72
A F + G+++EG++F R +V+VG+P+ T I + L+E Y
Sbjct 696 AIFFSIARGKVAEGIDFDRHYGRCVVMVGIPYQYTLSKILQSRLSFLKENY 746
> bbo:BBOV_III008820 17.m07769; DNA repair helicase (rad3) family
protein; K11136 regulator of telomere elongation helicase
1
Length=948
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 0/41 (0%)
Query 32 VMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKY 72
V G+L+EG++FSD R + + G+P+P+ + L+ Y
Sbjct 703 VCRGKLAEGIDFSDDSCRGVFLCGVPYPNPYEETIALKMDY 743
> tpv:TP01_0155 DNA repair protein Rad3; K10844 DNA excision repair
protein ERCC-2 [EC:3.6.4.12]
Length=894
Score = 33.1 bits (74), Expect = 0.19, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 0/43 (0%)
Query 25 KTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFR 67
+ A + G+++EG++F+ R +++VG+PF T + +
Sbjct 728 RGALFLSICRGKVAEGIDFNSHYGRCVILVGIPFQYTLSKVLK 770
> tgo:TGME49_016870 excision repair protein rad15, putative ;
K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12]
Length=1065
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query 25 KTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMRQH 81
+ A F + G+++EG++F R +V+ G+PF Q T+ R+ + D +R+H
Sbjct 862 RGAVFFSIARGKVAEGIDFDRHFGRCVVLFGVPF---QYTLSRVLKARLD--FIREH 913
> bbo:BBOV_IV001300 21.m02831; DNA excision repair helicase; K10844
DNA excision repair protein ERCC-2 [EC:3.6.4.12]
Length=822
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query 27 AFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFR-----LQEKYYDEIMMRQH 81
A + G+++EG++F R ++++G+PF T + + ++ KY IM +
Sbjct 656 ALFLSICRGKVAEGIDFDRHYGRCVILIGVPFQYTLSRVLKARLDFMRTKY--GIMENEF 713
Query 82 VTSAGAQEARQ 92
+T ++A Q
Sbjct 714 LTFDAMRQAAQ 724
> pfa:PFA_0210c conserved Plasmodium protein, unknown function
Length=466
Score = 31.2 bits (69), Expect = 0.82, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query 45 DALARLLVIVGLPFP-STQDTIFRLQEKYYDEIMM 78
D L +I GLP+P +QDTI+ + +KYY+ M
Sbjct 270 DERKYLYLINGLPWPFKSQDTIYEVYQKYYNNKNM 304
> hsa:100287029 DDX11L10, DDX11L1, DDX11P; DEAD/H (Asp-Glu-Ala-Asp/His)
box polypeptide 11 like 10
Length=133
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 6/33 (18%)
Query 37 LSEGVNFSDALARLL------VIVGLPFPSTQD 63
+SE +NFSD L +LL V+ G+PFPS +
Sbjct 1 MSESINFSDNLGQLLSPPRCVVMPGMPFPSIRS 33
> hsa:100507301 hypothetical protein LOC100507301
Length=133
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 6/33 (18%)
Query 37 LSEGVNFSDALARLL------VIVGLPFPSTQD 63
+SE +NFSD L +LL V+ G+PFPS +
Sbjct 1 MSESINFSDNLGQLLSPPRCVVMPGMPFPSIRS 33
> pfa:PFI1650w DNA excision-repair helicase, putative; K10844
DNA excision repair protein ERCC-2 [EC:3.6.4.12]
Length=1056
Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query 25 KTAFLFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFR-----LQEKYYDEIMMR 79
K A + G+++EG++F + +++ G+P+ T I + L+E Y I
Sbjct 887 KGAVFLSICRGKIAEGIDFDKHYGKCVILFGIPYQYTLSKILKSRLDFLKETY--NIQEN 944
Query 80 QHVTSAGAQEARQ 92
+ +T ++A Q
Sbjct 945 EFLTFDAMRQASQ 957
> mmu:240476 Zfp407, 6430585N13Rik, Gm333, Gm334, Gm948, ZNF407;
zinc finger protein 407
Length=2246
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 23/103 (22%)
Query 6 PWQQCANGLAEPKEKPLRPKTAFLFCVMGGRLSEGVN--------FSDALARLLVIVGLP 57
P + CA GL + K V GG E +D L+ L V + +
Sbjct 1381 PLKDCAQGLKKKK-------------VEGGSFGESTRIRCDDCGFLADGLSGLNVHIAMK 1427
Query 58 FPSTQDTIFRL--QEKYYDEIMMRQHVTSAGAQEARQDSPSEF 98
P+ + L + +Y E + QH+ SAG Q S E
Sbjct 1428 HPTKEKHFHCLLCGKSFYTESNLHQHLASAGHMRNEQASVEEL 1470
> tgo:TGME49_040080 transporter, major facilitator family domain-containing
protein (EC:2.1.1.43)
Length=745
Score = 29.3 bits (64), Expect = 3.0, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 0/26 (0%)
Query 7 WQQCANGLAEPKEKPLRPKTAFLFCV 32
W CA GL E EKP R A L CV
Sbjct 279 WGHCAVGLCESGEKPPRLPEASLSCV 304
> tpv:TP02_0737 ABC transporter
Length=634
Score = 29.3 bits (64), Expect = 3.1, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query 31 CVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIMMRQHVTSAGAQEA 90
C M + + V+FS + + L IVG P + + TIFRL + YD + + ++
Sbjct 395 CPMNNLILKKVSFSLSKNQSLAIVG-PTGTGKTTIFRLLCRLYDPLRGEVLINGKSIKQY 453
Query 91 RQDSPSEFIGANKQ 104
Q+S +G Q
Sbjct 454 SQESLRSKLGVVSQ 467
> pfa:PF13_0089 Inositol polyphosphate kinase, putative
Length=1601
Score = 28.5 bits (62), Expect = 5.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 0/39 (0%)
Query 58 FPSTQDTIFRLQEKYYDEIMMRQHVTSAGAQEARQDSPS 96
F +T +T F ++KY ++I MR+++++ E Q + S
Sbjct 116 FVNTDETYFVREQKYSEQIRMRENISNGDIHENIQKNMS 154
> bbo:BBOV_III006210 17.m07551; hypothetical protein
Length=1062
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query 29 LFCVMGGRLSEGVNFSDALARLLVIVGLPFPST 61
+F V SEG+N L++VGLP+PST
Sbjct 945 MFAVCRSHSSEGLNLK---LSSLILVGLPYPST 974
> cel:C10C6.6 hypothetical protein; K14950 cation-transporting
ATPase 13A1 [EC:3.6.3.-]
Length=1178
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 0/46 (0%)
Query 32 VMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQEKYYDEIM 77
+ G ++ +FS A+ R+ V+ G P T DT F + K E++
Sbjct 568 ISGIKIFHRYHFSSAMKRMTVVAGYQSPGTSDTTFIVAVKGAPEVL 613
> cel:T08B2.7 hypothetical protein; K07515 enoyl-CoA hydratase
/ long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.211]
Length=781
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query 14 LAEPKEKPLRPKTAF----LFCVMGGRLSEGVNFSDALARLLVIVGLPFPSTQDTIFRLQ 69
++ P+++ +R + F L C L EGV S + + + G+ FP FR
Sbjct 685 VSSPEDRQIRLVSRFVNEALLC-----LEEGVLASPSDGDIASVFGVGFPPFWGGPFRFV 739
Query 70 EKYYDEIMMRQHVTSAGAQEARQDSPSEFI 99
+ Y + +++ AGA EA Q P + +
Sbjct 740 DLYGADKLVKSMEKFAGAYEAVQFEPCQLL 769
Lambda K H
0.319 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2013067560
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40