bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_7423_orf1
Length=168
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_026970 40S ribosomal protein S11, putative ; K02949... 224 1e-58
pfa:PFC0775w 40S ribosomal protein S11, putative; K02949 small... 195 7e-50
bbo:BBOV_II004570 18.m06381; 40S ribosomal protein S11; K02949... 186 3e-47
tpv:TP02_0298 40S ribosomal protein S11; K02949 small subunit ... 182 6e-46
mmu:27207 Rps11; ribosomal protein S11; K02949 small subunit r... 180 2e-45
hsa:6205 RPS11; ribosomal protein S11; K02949 small subunit ri... 180 2e-45
xla:380368 rps11, MGC64491; ribosomal protein S11; K02949 smal... 179 4e-45
dre:406686 rps11, wu:fa91c09, wu:fb34b11, zgc:56293; ribosomal... 178 8e-45
ath:AT4G30800 40S ribosomal protein S11 (RPS11B); K02949 small... 167 2e-41
ath:AT5G23740 RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA); structu... 165 8e-41
sce:YDR025W RPS11A; Rps11ap; K02949 small subunit ribosomal pr... 163 3e-40
sce:YBR048W RPS11B; Rps11bp; K02949 small subunit ribosomal pr... 163 3e-40
ath:AT3G48930 EMB1080 (embryo defective 1080); structural cons... 162 4e-40
cel:F40F11.1 rps-11; Ribosomal Protein, Small subunit family m... 158 7e-39
mmu:100039525 Gm9808; ribosomal protein S11 pseudogene 153 3e-37
hsa:219285 SAMD9L, C7orf6, DRIF2, FLJ39885, KIAA2005, UEF1; st... 36.2 0.060
eco:b3311 rpsQ, ECK3298, JW3273, neaA; 30S ribosomal subunit p... 34.3 0.20
ath:AT1G79850 RPS17; RPS17 (RIBOSOMAL PROTEIN S17); structural... 31.6 1.5
mmu:59009 Sh3rf1, 2200003J05Rik, Posh, R75531, Sh3md2; SH3 dom... 31.2 1.8
dre:170846 appb, wu:fc43a03, zgc:92771; amyloid beta (A4) prec... 30.4 2.8
> tgo:TGME49_026970 40S ribosomal protein S11, putative ; K02949
small subunit ribosomal protein S11e
Length=161
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/136 (78%), Positives = 116/136 (85%), Gaps = 1/136 (0%)
Query 34 NTEKAFQRQHGASQLA-LAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFTGNV 92
TE+AFQ+Q G S L L + +K+ RYW++VGLGF TPRLAKE Y+DKKCPFTGNV
Sbjct 7 QTERAFQKQDGVSSLGRLHLTGQKKRTQRYWKDVGLGFQTPRLAKESKYVDKKCPFTGNV 66
Query 93 SIRGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGDIV 152
SIRGR+IKGMVIS KMKR VVIRR YLHFV KYSR EKRHKNVTCHLSPCFEQVKEGDIV
Sbjct 67 SIRGRVIKGMVISTKMKRAVVIRRNYLHFVPKYSRFEKRHKNVTCHLSPCFEQVKEGDIV 126
Query 153 TAGQCRPLSKTIRFNV 168
TAGQCRPLSKTIRFNV
Sbjct 127 TAGQCRPLSKTIRFNV 142
> pfa:PFC0775w 40S ribosomal protein S11, putative; K02949 small
subunit ribosomal protein S11e
Length=161
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/134 (69%), Positives = 110/134 (82%), Gaps = 2/134 (1%)
Query 36 EKAFQRQHGASQLALAQSSKKRGK-ARYWREVGLGFATPRLAKEGTYIDKKCPFTGNVSI 94
E+A+Q+Q GAS + K RYW++VGLGFATP+ AKEG Y+DKKCPFTGNVSI
Sbjct 10 ERAYQKQEGASFFNSKKIKKGSKSYIRYWKKVGLGFATPKEAKEGVYVDKKCPFTGNVSI 69
Query 95 RGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGDIVTA 154
RGRI+KGMVIS KMKR ++IRR YLH+V+KY+R EKRHKN+ CH SPCF+ VKEGDIVT
Sbjct 70 RGRILKGMVISNKMKRTIIIRRNYLHYVKKYNRFEKRHKNIPCHCSPCFD-VKEGDIVTV 128
Query 155 GQCRPLSKTIRFNV 168
GQCRPLSKT+RFNV
Sbjct 129 GQCRPLSKTVRFNV 142
> bbo:BBOV_II004570 18.m06381; 40S ribosomal protein S11; K02949
small subunit ribosomal protein S11e
Length=156
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 108/134 (80%), Gaps = 4/134 (2%)
Query 35 TEKAFQRQHGASQLALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFTGNVSI 94
KA+Q+Q S L + +K +RY+++VG+GF TP+ AKEGTYIDKKCPFTGNVSI
Sbjct 8 VHKAYQKQPNVSVLKFQKLGRK---SRYYKDVGMGFETPKEAKEGTYIDKKCPFTGNVSI 64
Query 95 RGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGDIVTA 154
RGRIIKGMV+SAKMKR +++R +YLH+V+KY+R EKRH+N+ CH SPCFE GDIVT
Sbjct 65 RGRIIKGMVLSAKMKRTIIMRVSYLHYVKKYNRFEKRHRNIPCHCSPCFEPT-AGDIVTV 123
Query 155 GQCRPLSKTIRFNV 168
GQCRPLSKT+RFNV
Sbjct 124 GQCRPLSKTVRFNV 137
> tpv:TP02_0298 40S ribosomal protein S11; K02949 small subunit
ribosomal protein S11e
Length=156
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 105/134 (78%), Gaps = 4/134 (2%)
Query 35 TEKAFQRQHGASQLALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFTGNVSI 94
KAFQ+Q + +++ + K KARYW++VG+GF TP+ AKEG Y+DKKCPFTGNVSI
Sbjct 8 VHKAFQKQ---ANVSIKKLQKLGNKARYWKDVGMGFVTPKEAKEGHYVDKKCPFTGNVSI 64
Query 95 RGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGDIVTA 154
RGR++KGMVIS KMK +V+R YL +V KY+R EKRHKNV CH+SPCF V GDIVT
Sbjct 65 RGRVLKGMVISHKMKNTLVMRVNYLQYVPKYNRFEKRHKNVPCHVSPCFT-VSAGDIVTV 123
Query 155 GQCRPLSKTIRFNV 168
GQCRPLSKT+RFNV
Sbjct 124 GQCRPLSKTVRFNV 137
> mmu:27207 Rps11; ribosomal protein S11; K02949 small subunit
ribosomal protein S11e
Length=158
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 108/139 (77%), Gaps = 5/139 (3%)
Query 34 NTEKAFQRQ----HGASQLALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFT 89
TE+A+Q+Q ++ L ++ K++ RY++ +GLGF TP+ A EGTYIDKKCPFT
Sbjct 5 QTERAYQKQPTIFQNKKRVLLGETGKEK-LPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query 90 GNVSIRGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEG 149
GNVSIRGRI+ G+V KM+R +VIRR YLH++RKY+R EKRHKN++ HLSPCF V+ G
Sbjct 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIG 123
Query 150 DIVTAGQCRPLSKTIRFNV 168
DIVT G+CRPLSKT+RFNV
Sbjct 124 DIVTVGECRPLSKTVRFNV 142
> hsa:6205 RPS11; ribosomal protein S11; K02949 small subunit
ribosomal protein S11e
Length=158
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 108/139 (77%), Gaps = 5/139 (3%)
Query 34 NTEKAFQRQ----HGASQLALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFT 89
TE+A+Q+Q ++ L ++ K++ RY++ +GLGF TP+ A EGTYIDKKCPFT
Sbjct 5 QTERAYQKQPTIFQNKKRVLLGETGKEK-LPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query 90 GNVSIRGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEG 149
GNVSIRGRI+ G+V KM+R +VIRR YLH++RKY+R EKRHKN++ HLSPCF V+ G
Sbjct 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIG 123
Query 150 DIVTAGQCRPLSKTIRFNV 168
DIVT G+CRPLSKT+RFNV
Sbjct 124 DIVTVGECRPLSKTVRFNV 142
> xla:380368 rps11, MGC64491; ribosomal protein S11; K02949 small
subunit ribosomal protein S11e
Length=158
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 103/138 (74%), Gaps = 3/138 (2%)
Query 34 NTEKAFQRQHGASQ---LALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFTG 90
TE+A+Q+Q Q L + K RY+R VGLGF TPR A +GTYIDKKCPFTG
Sbjct 5 QTERAYQKQPTIFQNKKRVLQGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKCPFTG 64
Query 91 NVSIRGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGD 150
NVSIRGRI+ G+V KM+R +VIRR YLH++RKY+R EKRHKN++ HLSPCF V+ GD
Sbjct 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQVGD 124
Query 151 IVTAGQCRPLSKTIRFNV 168
VT G+CRPLSKT+RFNV
Sbjct 125 TVTVGECRPLSKTVRFNV 142
> dre:406686 rps11, wu:fa91c09, wu:fb34b11, zgc:56293; ribosomal
protein S11; K02949 small subunit ribosomal protein S11e
Length=159
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 102/138 (73%), Gaps = 4/138 (2%)
Query 35 TEKAFQRQ----HGASQLALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFTG 90
E+A+Q+Q ++ + S K RY R VGLGF TPR A +GTYIDKKCPFTG
Sbjct 6 NERAYQKQPTIFQNKKRVLAVEGSGKEKLPRYHRNVGLGFKTPREAIDGTYIDKKCPFTG 65
Query 91 NVSIRGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGD 150
NVSIRGRI+ G+V KM+R +VIRR YLH++RKY+R EKRHKN++ HLSPCF V GD
Sbjct 66 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVTVGD 125
Query 151 IVTAGQCRPLSKTIRFNV 168
IVT G+CRPLSKT+RFNV
Sbjct 126 IVTVGECRPLSKTVRFNV 143
> ath:AT4G30800 40S ribosomal protein S11 (RPS11B); K02949 small
subunit ribosomal protein S11e
Length=159
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 102/138 (73%), Gaps = 4/138 (2%)
Query 34 NTEKAFQRQ---HGASQLALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFTG 90
TEKAF +Q +S+ + +G R+W+ +GLGF TPR A EGTYID+KCPFTG
Sbjct 4 QTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCPFTG 63
Query 91 NVSIRGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGD 150
VSIRGRI+ G SAKM+R +++RR YLHFV+KY R EKRH N+ H+SPCF +VKEGD
Sbjct 64 TVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCF-RVKEGD 122
Query 151 IVTAGQCRPLSKTIRFNV 168
VT GQCRPLSKT+RFNV
Sbjct 123 RVTIGQCRPLSKTVRFNV 140
> ath:AT5G23740 RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA); structural
constituent of ribosome; K02949 small subunit ribosomal
protein S11e
Length=159
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 100/138 (72%), Gaps = 4/138 (2%)
Query 34 NTEKAFQRQ---HGASQLALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFTG 90
TEKAF +Q +S+++ +G R+W+ +GLGF TPR A +G YID KCPFTG
Sbjct 4 QTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCPFTG 63
Query 91 NVSIRGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGD 150
VSIRGRI+ G SAKM+R +++RR YLHFV+KY R EKRH N+ H+SPCF +VKEGD
Sbjct 64 TVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCF-RVKEGD 122
Query 151 IVTAGQCRPLSKTIRFNV 168
V GQCRPLSKT+RFNV
Sbjct 123 HVIIGQCRPLSKTVRFNV 140
> sce:YDR025W RPS11A; Rps11ap; K02949 small subunit ribosomal
protein S11e
Length=156
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 101/134 (75%), Gaps = 3/134 (2%)
Query 35 TEKAFQRQHGASQLALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFTGNVSI 94
+E+AFQ+Q ++SK+ R+++ GLGF TP+ A EG+YIDKKCPFTG VSI
Sbjct 9 SERAFQKQPHIFNNPKVKTSKR--TKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSI 66
Query 95 RGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGDIVTA 154
RG+I+ G V+S KM R +VIRR YLH++ KY+R EKRHKNV H+SP F +V+ GDIVT
Sbjct 67 RGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAF-RVQVGDIVTV 125
Query 155 GQCRPLSKTIRFNV 168
GQCRP+SKT+RFNV
Sbjct 126 GQCRPISKTVRFNV 139
> sce:YBR048W RPS11B; Rps11bp; K02949 small subunit ribosomal
protein S11e
Length=156
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 101/134 (75%), Gaps = 3/134 (2%)
Query 35 TEKAFQRQHGASQLALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFTGNVSI 94
+E+AFQ+Q ++SK+ R+++ GLGF TP+ A EG+YIDKKCPFTG VSI
Sbjct 9 SERAFQKQPHIFNNPKVKTSKR--TKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSI 66
Query 95 RGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGDIVTA 154
RG+I+ G V+S KM R +VIRR YLH++ KY+R EKRHKNV H+SP F +V+ GDIVT
Sbjct 67 RGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAF-RVQVGDIVTV 125
Query 155 GQCRPLSKTIRFNV 168
GQCRP+SKT+RFNV
Sbjct 126 GQCRPISKTVRFNV 139
> ath:AT3G48930 EMB1080 (embryo defective 1080); structural constituent
of ribosome; K02949 small subunit ribosomal protein
S11e
Length=160
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 100/138 (72%), Gaps = 4/138 (2%)
Query 34 NTEKAFQRQ---HGASQLALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFTG 90
TEKAF +Q +S+ + +G R+W+ +GLGF TPR A +G Y+DKKCPFTG
Sbjct 4 QTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCPFTG 63
Query 91 NVSIRGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGD 150
VSIRGRI+ G SAKM+R +++RR YLHFV+KY R EKRH N+ H+SPCF +VKEGD
Sbjct 64 TVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCF-RVKEGD 122
Query 151 IVTAGQCRPLSKTIRFNV 168
+ GQCRPLSKT+RFNV
Sbjct 123 HIIIGQCRPLSKTVRFNV 140
> cel:F40F11.1 rps-11; Ribosomal Protein, Small subunit family
member (rps-11); K02949 small subunit ribosomal protein S11e
Length=155
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 96/137 (70%), Gaps = 5/137 (3%)
Query 35 TEKAFQRQHGAS---QLALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFTGN 91
TE+AF +Q + + + SKK RY REVGLGF PR A EGTYIDKKCP+ GN
Sbjct 5 TERAFLKQPTVNLNNKARILAGSKK--TPRYIREVGLGFKAPRDAVEGTYIDKKCPWAGN 62
Query 92 VSIRGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGDI 151
V IRG I+ G+V+ KM R +V+RR YLH+++KY R EKRHKNV H SP F + GD+
Sbjct 63 VPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFRDIHPGDL 122
Query 152 VTAGQCRPLSKTIRFNV 168
VT G+CRPLSKT+RFNV
Sbjct 123 VTIGECRPLSKTVRFNV 139
> mmu:100039525 Gm9808; ribosomal protein S11 pseudogene
Length=158
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/139 (53%), Positives = 100/139 (71%), Gaps = 5/139 (3%)
Query 34 NTEKAFQRQHGASQ----LALAQSSKKRGKARYWREVGLGFATPRLAKEGTYIDKKCPFT 89
TE A+Q+Q Q + L ++ K++ Y++ + LGF P+ A +GTYIDKKCPFT
Sbjct 5 QTEHAYQKQPTIFQNKKRVLLGETGKEKLPP-YYKNIALGFKMPKEAIKGTYIDKKCPFT 63
Query 90 GNVSIRGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEG 149
GNVSIRG I+ G+V KM+R +VI + YL ++RKY+R EK HKN++ HLSPCF V+ G
Sbjct 64 GNVSIRGWILSGVVTKMKMQRTIVICQDYLCYIRKYNRFEKCHKNMSVHLSPCFRDVQIG 123
Query 150 DIVTAGQCRPLSKTIRFNV 168
DIVT G+CRPLSKT+RFNV
Sbjct 124 DIVTVGECRPLSKTVRFNV 142
> hsa:219285 SAMD9L, C7orf6, DRIF2, FLJ39885, KIAA2005, UEF1;
sterile alpha motif domain containing 9-like
Length=1584
Score = 36.2 bits (82), Expect = 0.060, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 0/43 (0%)
Query 123 RKYSRVEKRHKNVTCHLSPCFEQVKEGDIVTAGQCRPLSKTIR 165
+K SR +++ + CHL PC Q KE ++ CR + +R
Sbjct 1294 KKVSRCFRKYTELFCHLDPCLLQSKESQLLQEENCRKKLEALR 1336
> eco:b3311 rpsQ, ECK3298, JW3273, neaA; 30S ribosomal subunit
protein S17; K02961 small subunit ribosomal protein S17
Length=84
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 16/74 (21%)
Query 97 RIIKGMVISAKMKRCVVI-------RRTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEG 149
R ++G V+S KM++ +V+ Y F+++ +++ +N C + G
Sbjct 6 RTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGI---------G 56
Query 150 DIVTAGQCRPLSKT 163
D+V +CRPLSKT
Sbjct 57 DVVEIRECRPLSKT 70
> ath:AT1G79850 RPS17; RPS17 (RIBOSOMAL PROTEIN S17); structural
constituent of ribosome; K02961 small subunit ribosomal protein
S17
Length=149
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query 75 LAKEGTYIDKKCPFTGNVSIRGRIIKGMVISAKMKRCVVIRRTYLHFVRKYSRVEKRHKN 134
L+K ++ + + P V + ++G V+ A + V + L KY R + K
Sbjct 29 LSKPNSFPNHRMPALVPVIRAMKTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKK 88
Query 135 VTCHLSPCFEQVKEGDIVTAGQCRPLSKTIRF 166
H P Q K GD+V + RP+SKT F
Sbjct 89 YQAH-DPD-NQFKVGDVVRLEKSRPISKTKSF 118
> mmu:59009 Sh3rf1, 2200003J05Rik, Posh, R75531, Sh3md2; SH3 domain
containing ring finger 1; K12171 E3 ubiquitin-protein
ligase SH3RF1 [EC:6.3.2.19]
Length=891
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query 9 NTAGCPADIVEAEAADGLGEVAKRPNTEKAFQRQHGASQLALAQSSKKRGKARYWREV 66
+TA CP+ ++ +A +K P+T+K +++H + L +A S + + R+ E+
Sbjct 275 DTAECPSATAQSTSA------SKHPDTKKNTRKRHSFTSLTMANKSSQGSQNRHSMEI 326
> dre:170846 appb, wu:fc43a03, zgc:92771; amyloid beta (A4) precursor
protein b; K04520 amyloid beta (A4) protein
Length=694
Score = 30.4 bits (67), Expect = 2.8, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query 116 RTYLHFVRKYSRVEKRHKNVTCHLSPCFEQVKEGDIVTAGQCRPLSKT 163
R L+ ++KY R E++ + H FE V+E D A Q RP T
Sbjct 428 RQVLNLLKKYIRAEQKDRQ---HTLKHFEHVREVDPKKASQIRPFVMT 472
Lambda K H
0.321 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 4157683456
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40