bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_7502_orf2 Length=160 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_024850 polyadenylate-binding protein, putative ; K1... 265 3e-71 pfa:PFL1170w polyadenylate-binding protein, putative; K13126 p... 250 2e-66 xla:432140 pabpc1-b, MGC130736, MGC79060, pab1, pabp, pabp1, p... 241 7e-64 hsa:26986 PABPC1, PAB1, PABP, PABP1, PABPC2, PABPL1; poly(A) b... 239 2e-63 mmu:18458 Pabpc1, PABP, Pabp1, PabpI, Pabpl1, ePAB; poly(A) bi... 239 2e-63 dre:606498 pabpc1a, pabpc1, wu:fb16a02, wu:fi19b08, wu:fj12d09... 238 8e-63 cel:F18H3.3 pab-2; PolyA Binding protein family member (pab-2)... 237 1e-62 xla:444284 pabpc4, MGC80927, PABP, ePAB, ePABP; poly(A) bindin... 237 1e-62 dre:321035 pabpc4, cb12, sb:cb12; poly(A) binding protein, cyt... 235 4e-62 bbo:BBOV_IV008280 23.m06515; polyadenylate binding protein; K1... 235 6e-62 xla:379896 pabpc1-a, MGC53109, pab1, pabp, pabp1, pabpc1, pabp... 235 6e-62 hsa:8761 PABPC4, APP-1, APP1, FLJ43938, PABP4, iPABP; poly(A) ... 234 1e-61 mmu:230721 Pabpc4, MGC11665, MGC6685; poly(A) binding protein,... 233 2e-61 dre:393856 pabpc1b, MGC77608, pabpc1, zgc:77608; poly A bindin... 233 2e-61 tpv:TP01_0945 polyadenylate binding protein; K13126 polyadenyl... 232 5e-61 mmu:100503296 polyadenylate-binding protein 4-like 232 5e-61 mmu:67543 Pabpc6, 4932702K14Rik, AI428050, MGC132900, Pabpc3; ... 232 5e-61 xla:443777 pabpc1l-b, MGC81363, epab, epabp-b, pabpc1l1; poly(... 229 3e-60 xla:398221 pabpc1l-a, MGC82273, ePAB, epabp-a, pabpc1l1; poly(... 228 7e-60 mmu:18459 Pabpc2, PABP, PABP+, Pabp2; poly(A) binding protein,... 228 9e-60 hsa:80336 PABPC1L, C20orf119, FLJ11840, FLJ30809, FLJ42053, PA... 227 1e-59 dre:327625 pabpc1l, fi20g03, pab-2, wu:fi20g03, zgc:55855; pol... 221 7e-58 hsa:5042 PABPC3, PABP3, PABPL3, tPABP; poly(A) binding protein... 221 1e-57 cpv:cgd6_3010 poly(a)-binding protein fabm ; K13126 polyadenyl... 221 1e-57 mmu:668382 Pabpc1l2b-ps, EG668382, Pabpc1l2b, Rbm32b; poly(A) ... 218 6e-57 hsa:340529 PABPC1L2A, MGC168104, PABPC1L2B, RBM32A; poly(A) bi... 218 7e-57 hsa:645974 PABPC1L2B, MGC168104, PABPC1L2A, RBM32B; poly(A) bi... 218 7e-57 mmu:381404 Pabpc1l, 1810053B01Rik, Epab; poly(A) binding prote... 214 8e-56 hsa:132430 PABPC4L, DKFZp686J06116; poly(A) binding protein, c... 199 3e-51 xla:495336 hypothetical LOC495336 197 1e-50 sce:YER165W PAB1; Pab1p; K13126 polyadenylate-binding protein 197 1e-50 mmu:241989 Pabpc4l, C330050A14Rik, EG241989; poly(A) binding p... 194 7e-50 ath:AT4G34110 PAB2; PAB2 (POLY(A) BINDING 2); RNA binding / tr... 194 8e-50 ath:AT1G71770 PAB5; PAB5 (POLY(A)-BINDING PROTEIN 5); RNA bind... 194 1e-49 ath:AT1G49760 PAB8; PAB8 (POLY(A) BINDING PROTEIN 8); RNA bind... 193 2e-49 ath:AT1G22760 PAB3; PAB3 (POLY(A) BINDING PROTEIN 3); RNA bind... 188 7e-48 hsa:140886 PABPC5, FLJ51677, PABP5; poly(A) binding protein, c... 171 1e-42 mmu:93728 Pabpc5, C820015E17, MGC130340, MGC130341; poly(A) bi... 170 2e-42 ath:AT2G36660 PAB7; PAB7 (POLY(A) BINDING PROTEIN 7); RNA bind... 162 6e-40 ath:AT2G23350 PAB4; PAB4 (POLY(A) BINDING PROTEIN 4); RNA bind... 157 2e-38 cel:Y106G6H.2 pab-1; PolyA Binding protein family member (pab-... 152 3e-37 ath:AT3G16380 PAB6; PAB6 (POLY(A) BINDING PROTEIN 6); RNA bind... 137 1e-32 tgo:TGME49_024580 splicing factor, putative (EC:3.1.2.15); K12... 105 8e-23 ath:AT1G34140 PAB1; PAB1 (POLY(A) BINDING PROTEIN 1); RNA bind... 105 9e-23 sce:YFR023W PES4; Pes4p 103 2e-22 bbo:BBOV_III006220 17.m07552; RNA recognition motif domaining ... 102 5e-22 sce:YHR015W MIP6; Mip6p 102 6e-22 ath:AT2G18510 emb2444 (embryo defective 2444); RNA binding / n... 102 7e-22 xla:734673 hypothetical protein MGC116464 97.1 2e-20 xla:379792 sf3b4, MGC52742, spx; splicing factor 3b, subunit 4... 96.3 4e-20 > tgo:TGME49_024850 polyadenylate-binding protein, putative ; K13126 polyadenylate-binding protein Length=768 Score = 265 bits (678), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 123/160 (76%), Positives = 141/160 (88%), Gaps = 3/160 (1%) Query 1 DAGAGPHPTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVN 60 +AGA +VSPSLY+GDLH +VTEAMLFEVFN+VGPVTSIRVCRD+V+RRSLGYAYVN Sbjct 74 NAGAA---NFVSPSLYVGDLHQDVTEAMLFEVFNSVGPVTSIRVCRDTVTRRSLGYAYVN 130 Query 61 YQSLGDAERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDT 120 YQ + DAER+LD LN+ +I+GQPCRIMW RDPSLR+SG GN+FVKNLDK+IDNKALYDT Sbjct 131 YQGIQDAERSLDTLNYTVIKGQPCRIMWCHRDPSLRKSGNGNIFVKNLDKNIDNKALYDT 190 Query 121 FSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 FSLFGNILSCKV VD+ S+GYGFVHYE E SARSAI+K Sbjct 191 FSLFGNILSCKVAVDDNGHSKGYGFVHYENEESARSAIDK 230 Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 83/151 (54%), Gaps = 9/151 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++++ +L + L++ F+ G + S +V D + S GY +V+Y++ A A+D Sbjct 172 NIFVKNLDKNIDNKALYDTFSLFGNILSCKVAVDD-NGHSKGYGFVHYENEESARSAIDK 230 Query 74 LNFALIRGQPCR----IMWSQRDPSLRRSGAGNVFVKNLDKSIDNKA-LYDTFSLFGNIL 128 +N LI G+ I ++RD +L + NV++KN+ + ++++ L +TFS FG+I Sbjct 231 VNGMLIGGKTVYVGPFIRRAERD-NLAEAKYTNVYIKNMPSAWEDESRLRETFSKFGSIT 289 Query 129 SCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 S V D + R + F ++ SA++A+E Sbjct 290 SLVVRKDP--KGRLFAFCNFADHDSAKAAVE 318 Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 44/174 (25%) Query 26 EAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDALNF-------AL 78 E+ L E F+ G +TS+ V +D R +A+ N+ A+ A++ALN A+ Sbjct 275 ESRLRETFSKFGSITSLVVRKDPKGRL---FAFCNFADHDSAKAAVEALNGKRVTDAGAI 331 Query 79 IRGQPC---------------RIMW-------SQRDPSLR------------RSGAGNVF 104 G+ +I++ + R LR R N++ Sbjct 332 KEGEDSGAEEKEEEGQKREGDQILFVGPHQSKAHRSAMLRAKFEQMNQDRNDRFQGVNLY 391 Query 105 VKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 +KN+D SID++ L F FG+I S KV DE SR +GFV + + A A+ Sbjct 392 IKNMDDSIDDEKLRQLFEPFGSITSAKVMRDERGVSRCFGFVCFMSPEEATKAV 445 Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 21/108 (19%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDS--VSRRSLGYAYVNYQSLGDAERAL 71 +LYI ++ + + L ++F G +TS +V RD VSR + +V + S +A +A+ Sbjct 389 NLYIKNMDDSIDDEKLRQLFEPFGSITSAKVMRDERGVSR---CFGFVCFMSPEEATKAV 445 Query 72 DALNFALIRGQPC----------RIMWSQ---RDPSLRRSGA---GNV 103 ++ L++G+P R+M Q R PSLR + A GNV Sbjct 446 TEMHLKLVKGKPLYVGLAERREQRLMRLQQRFRLPSLRPAAAALPGNV 493 > pfa:PFL1170w polyadenylate-binding protein, putative; K13126 polyadenylate-binding protein Length=875 Score = 250 bits (638), Expect = 2e-66, Method: Composition-based stats. Identities = 111/154 (72%), Positives = 134/154 (87%), Gaps = 0/154 (0%) Query 7 HPTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGD 66 HP++ + SLY+GDL+ +VTEA+L+E+FN VG V+SIRVCRDSV+R+SLGYAYVNY +L D Sbjct 10 HPSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLAD 69 Query 67 AERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGN 126 AERALD LN+ I+GQP R+MWS RDPSLR+SG GN+FVKNLDKSIDNKAL+DTFS+FGN Sbjct 70 AERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKSIDNKALFDTFSMFGN 129 Query 127 ILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 ILSCKV DEF +S+ YGFVHYE E SA+ AIEK Sbjct 130 ILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEK 163 Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 5/148 (3%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++++ +L + LF+ F+ G + S +V D + S Y +V+Y+ A+ A++ Sbjct 105 NIFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGK-SKSYGFVHYEDEESAKEAIEK 163 Query 74 LNFALIRGQPCRI--MWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCK 131 +N + + + + + + + N++VKN S+ L F+ +G I S Sbjct 164 VNGVQLGSKNVYVGPFIKKSERATNDTKFTNLYVKNFPDSVTETHLRQLFNPYGEITSMI 223 Query 132 VGVDEFNRSRGYGFVHYETEASARSAIE 159 V +D N++R + F++Y SA++A++ Sbjct 224 VKMD--NKNRKFCFINYADAESAKNAMD 249 Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 0/57 (0%) Query 102 NVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 N+++KNLD ID+ L + F FG I S KV DE +S+G+GFV + ++ A A+ Sbjct 451 NLYIKNLDDGIDDIMLRELFEPFGTITSAKVMRDEKEQSKGFGFVCFASQEEANKAV 507 Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 2/85 (2%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LYI +L + + ML E+F G +TS +V RD +S G+ +V + S +A +A+ Sbjct 451 NLYIKNLDDGIDDIMLRELFEPFGTITSAKVMRDE-KEQSKGFGFVCFASQEEANKAVTE 509 Query 74 LNFALIRGQPCRI-MWSQRDPSLRR 97 ++ +I G+P + + +R+ L R Sbjct 510 MHLKIINGKPLYVGLAEKREQRLSR 534 Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LY+ + VTE L ++FN G +TS+ V D+ +R+ + ++NY A+ A+D Sbjct 194 NLYVKNFPDSVTETHLRQLFNPYGEITSMIVKMDNKNRK---FCFINYADAESAKNAMDN 250 Query 74 LN 75 LN Sbjct 251 LN 252 > xla:432140 pabpc1-b, MGC130736, MGC79060, pab1, pabp, pabp1, pabpc2; poly(A) binding protein, cytoplasmic 1; K13126 polyadenylate-binding protein Length=633 Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 109/153 (71%), Positives = 130/153 (84%), Gaps = 1/153 (0%) Query 8 PTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDA 67 P+Y SLY+GDLHP+VTEAML+E F+ GP+ SIRVCRD ++RRSLGYAYVN+Q DA Sbjct 6 PSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADA 65 Query 68 ERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 ERALD +NF +I+G+P RIMWSQRDPSLR+SG GN+F+KNLDKSIDNKALYDTFS FGNI Sbjct 66 ERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 125 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LSCKV DE N S+GYGFVH+ET+ +A AI+K Sbjct 126 LSCKVVCDE-NGSKGYGFVHFETQEAAERAIDK 157 Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 8/152 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D S GY +V++++ AERA+D Sbjct 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDK 157 Query 74 LNFALIRGQPCRI----MWSQRDPSL--RRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + +R+ L R NV++KN + +D++ L + F +G Sbjct 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAA 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 LS KV D+ +SRG+GFV +E A+ A++ Sbjct 218 LSVKVMTDDHGKSRGFGFVSFERHEDAQKAVD 249 Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ + L E F G S++V D + S G+ +V+++ DA++A+D Sbjct 192 NVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGK-SRGFGFVSFERHEDAQKAVDD 250 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 +N + G+ + +Q R L+R N++VKNLD ID++ L Sbjct 251 MNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 F+ FG+I S KV + E RS+G+GFV + + A A+ Sbjct 311 RKEFTPFGSITSAKVMM-EGGRSKGFGFVCFSSPEEATKAV 350 Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query 92 DPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFN-RSRGYGFVHYET 150 +PS +++V +L + LY+ FS G ILS +V D RS GY +V+++ Sbjct 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61 Query 151 EASARSAIE 159 A A A++ Sbjct 62 PADAERALD 70 Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L + F G +TS +V + RS G+ +V + S +A + Sbjct 291 YQGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMME--GGRSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQR 91 A+ +N ++ +P + +QR Sbjct 349 AVTEMNGRIVATKPLYVALAQR 370 > hsa:26986 PABPC1, PAB1, PABP, PABP1, PABPC2, PABPL1; poly(A) binding protein, cytoplasmic 1; K13126 polyadenylate-binding protein Length=636 Score = 239 bits (611), Expect = 2e-63, Method: Composition-based stats. Identities = 110/153 (71%), Positives = 130/153 (84%), Gaps = 1/153 (0%) Query 8 PTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDA 67 P+Y SLY+GDLHP+VTEAML+E F+ GP+ SIRVCRD ++RRSLGYAYVN+Q DA Sbjct 6 PSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADA 65 Query 68 ERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 ERALD +NF +I+G+P RIMWSQRDPSLR+SG GN+F+KNLDKSIDNKALYDTFS FGNI Sbjct 66 ERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 125 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LSCKV DE N S+GYGFVH+ET+ +A AIEK Sbjct 126 LSCKVVCDE-NGSKGYGFVHFETQEAAERAIEK 157 Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 8/153 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D S GY +V++++ AERA++ Sbjct 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157 Query 74 LNFALIRGQPCRI----MWSQRDPSL--RRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + +R+ L R NV++KN + +D++ L D F FG Sbjct 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LS KV DE +S+G+GFV +E A+ A+++ Sbjct 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250 Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ + L ++F GP S++V D S +S G+ +V+++ DA++A+D Sbjct 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDE 250 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 +N + G+ + +Q R L+R N++VKNLD ID++ L Sbjct 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 FS FG I S KV + E RS+G+GFV + + A A+ Sbjct 311 RKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAV 350 Score = 37.0 bits (84), Expect = 0.026, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query 92 DPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFN-RSRGYGFVHYET 150 +PS +++V +L + LY+ FS G ILS +V D RS GY +V+++ Sbjct 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61 Query 151 EASARSAIE 159 A A A++ Sbjct 62 PADAERALD 70 Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L + F+ G +TS +V + RS G+ +V + S +A + Sbjct 291 YQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQR 91 A+ +N ++ +P + +QR Sbjct 349 AVTEMNGRIVATKPLYVALAQR 370 > mmu:18458 Pabpc1, PABP, Pabp1, PabpI, Pabpl1, ePAB; poly(A) binding protein, cytoplasmic 1; K13126 polyadenylate-binding protein Length=636 Score = 239 bits (611), Expect = 2e-63, Method: Composition-based stats. Identities = 110/153 (71%), Positives = 130/153 (84%), Gaps = 1/153 (0%) Query 8 PTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDA 67 P+Y SLY+GDLHP+VTEAML+E F+ GP+ SIRVCRD ++RRSLGYAYVN+Q DA Sbjct 6 PSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADA 65 Query 68 ERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 ERALD +NF +I+G+P RIMWSQRDPSLR+SG GN+F+KNLDKSIDNKALYDTFS FGNI Sbjct 66 ERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 125 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LSCKV DE N S+GYGFVH+ET+ +A AIEK Sbjct 126 LSCKVVCDE-NGSKGYGFVHFETQEAAERAIEK 157 Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 83/153 (54%), Gaps = 8/153 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D S GY +V++++ AERA++ Sbjct 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157 Query 74 LNFALIRGQPCRI----MWSQRDPSL--RRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + +R+ L R NV++KN + +D++ L + F FG Sbjct 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPA 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LS KV DE +S+G+GFV +E A+ A+++ Sbjct 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250 Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ + L E+F GP S++V D S +S G+ +V+++ DA++A+D Sbjct 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDE 250 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 +N + G+ + +Q R L+R N++VKNLD ID++ L Sbjct 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 FS FG I S KV + E RS+G+GFV + + A A+ Sbjct 311 RKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAV 350 Score = 37.0 bits (84), Expect = 0.026, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query 92 DPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFN-RSRGYGFVHYET 150 +PS +++V +L + LY+ FS G ILS +V D RS GY +V+++ Sbjct 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61 Query 151 EASARSAIE 159 A A A++ Sbjct 62 PADAERALD 70 Score = 35.8 bits (81), Expect = 0.069, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L + F+ G +TS +V + RS G+ +V + S +A + Sbjct 291 YQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQR 91 A+ +N ++ +P + +QR Sbjct 349 AVTEMNGRIVATKPLYVALAQR 370 > dre:606498 pabpc1a, pabpc1, wu:fb16a02, wu:fi19b08, wu:fj12d09, wu:fj61f06, zgc:109879; poly A binding protein, cytoplasmic 1 a; K13126 polyadenylate-binding protein Length=634 Score = 238 bits (606), Expect = 8e-63, Method: Composition-based stats. Identities = 110/153 (71%), Positives = 129/153 (84%), Gaps = 1/153 (0%) Query 8 PTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDA 67 P+Y SLY+GDLHP+VTEAML+E F+ GP+ SIRVCRD ++RRSLGYAYVN+Q DA Sbjct 6 PSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADA 65 Query 68 ERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 ERALD +NF +I+G+P RIMWSQRDPSLR+SG GN+F+KNLDKSIDNKALYDTFS FGNI Sbjct 66 ERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 125 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LSCKV DE N S+GYGFVH+ET +A AIEK Sbjct 126 LSCKVVCDE-NGSKGYGFVHFETHEAAERAIEK 157 Score = 75.9 bits (185), Expect = 5e-14, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ + L E+F GP SIRV D S +S G+ +V+++ DA+RA+D Sbjct 192 NVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDD-SGKSKGFGFVSFERHEDAQRAVDE 250 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 +N + G+ + +Q R L+R N++VKNLD +D++ L Sbjct 251 MNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 FS FG I S KV + E RS+G+GFV + + A A+ Sbjct 311 RKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAV 350 Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 8/153 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D S GY +V++++ AERA++ Sbjct 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEK 157 Query 74 LNFALIRGQPCRI-MWSQRDPSLRRSGA-----GNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + + R GA NV++KN + +D++ L + F +G Sbjct 158 MNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPA 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LS +V D+ +S+G+GFV +E A+ A+++ Sbjct 218 LSIRVMTDDSGKSKGFGFVSFERHEDAQRAVDE 250 Score = 37.0 bits (84), Expect = 0.025, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query 92 DPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFN-RSRGYGFVHYET 150 +PS +++V +L + LY+ FS G ILS +V D RS GY +V+++ Sbjct 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQ 61 Query 151 EASARSAIE 159 A A A++ Sbjct 62 PADAERALD 70 Score = 35.0 bits (79), Expect = 0.11, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L + F+ G +TS +V + RS G+ +V + S +A + Sbjct 291 YQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQR 91 A+ +N ++ +P + +QR Sbjct 349 AVTEMNGRIVATKPLYVALAQR 370 > cel:F18H3.3 pab-2; PolyA Binding protein family member (pab-2); K13126 polyadenylate-binding protein Length=566 Score = 237 bits (604), Expect = 1e-62, Method: Composition-based stats. Identities = 109/158 (68%), Positives = 130/158 (82%), Gaps = 0/158 (0%) Query 3 GAGPHPTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQ 62 G P+ TY SLYIGDLHP+V+EAMLFE F+ GPV SIRVCRD+ SR SLGYAYVN+Q Sbjct 47 GYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQ 106 Query 63 SLGDAERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFS 122 DAERALD +NF +I G+P RIMWSQRDP+ RR+G GN+F+KNLD+ IDNK++YDTFS Sbjct 107 QPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFS 166 Query 123 LFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LFGNILSCKV D+ S+GYGFVH+ETE SA++AIEK Sbjct 167 LFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEK 204 Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 19/163 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++++ + + + L +F+ G +TS V D+ + G+ +V + A +A++ Sbjct 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPK-GFGFVAFADQDAAGQAVEK 297 Query 74 LNFALIRGQPCRIMW------SQRDPSLRRSGAG------------NVFVKNLDKSIDNK 115 LN +++ G C++ S+R L+R N++VKN+++ +++ Sbjct 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357 Query 116 ALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 L D FS FG I S KV VDE RS+G+GFV +E A +A+ Sbjct 358 GLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAV 400 Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 7/153 (4%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + +++ F+ G + S +V D S GY +V++++ A+ A++ Sbjct 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDD-EGNSKGYGFVHFETEHSAQTAIEK 204 Query 74 LNFALIRGQPCRI----MWSQRDPSLRRSGAG--NVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + +QR L SG NVFVKN + +D + L FS FG I Sbjct 205 VNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 S V D + +G+GFV + + +A A+EK Sbjct 265 TSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297 Score = 38.1 bits (87), Expect = 0.012, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ ++ ++ + L + F++ G +TS +V D + RS G+ +V ++ +A Sbjct 340 YQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATA 398 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNL 108 A+ +N +I +P + +QR RR+ + +++ L Sbjct 399 AVTDMNSKMIGAKPLYVALAQRKED-RRAQLASQYMQRL 436 > xla:444284 pabpc4, MGC80927, PABP, ePAB, ePABP; poly(A) binding protein, cytoplasmic 4 (inducible form); K13126 polyadenylate-binding protein Length=626 Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 110/152 (72%), Positives = 128/152 (84%), Gaps = 1/152 (0%) Query 9 TYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAE 68 +Y SLY+GDLHP+VTEAML+E F+ GPV SIRVCRD ++RRSLGYAYVN+Q DAE Sbjct 7 SYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAE 66 Query 69 RALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNIL 128 RALD +NF +I+G+P RIMWSQRDPSLR+SG GNVF+KNLDKSIDNKALYDTFS FGNIL Sbjct 67 RALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126 Query 129 SCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 SCKV DE N S+GY FVH+ET+ +A AIEK Sbjct 127 SCKVVCDE-NGSKGYAFVHFETQDAADRAIEK 157 Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 84/155 (54%), Gaps = 14/155 (9%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D S GYA+V++++ A+RA++ Sbjct 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEK 157 Query 74 LNFALIRGQP-------CRIMWSQRDPSL--RRSGAGNVFVKNLDKSIDNKALYDTFSLF 124 +N L+ + CR +R+ L + NV++KN + +D++ L +TFS + Sbjct 158 MNGMLLNDRKVFVGRFKCR---REREAELGAKAKEFTNVYIKNFGEDMDDERLKETFSKY 214 Query 125 GNILSCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 G LS KV D +S+G+GFV +E A A++ Sbjct 215 GKTLSVKVMTDPSGKSKGFGFVSFERHEDANKAVD 249 Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ + L E F+ G S++V D S +S G+ +V+++ DA +A+D Sbjct 192 NVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDP-SGKSKGFGFVSFERHEDANKAVDD 250 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 +N + G+ + +Q R L+R N+++KNLD +ID++ L Sbjct 251 MNGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 FS FG+I S KV ++E RS+G+GFV + + A A+ Sbjct 311 RKEFSPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAV 350 Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 3/99 (3%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LYI +L + + L + F+ G +TS +V + RS G+ +V + S +A + Sbjct 291 YQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--EGRSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNL 108 A+ +N ++ +P + +QR R++ N +++ + Sbjct 349 AVTEMNGRIVGSKPLYVALAQRKEE-RKAHLTNQYMQRI 386 > dre:321035 pabpc4, cb12, sb:cb12; poly(A) binding protein, cytoplasmic 4 (inducible form); K13126 polyadenylate-binding protein Length=637 Score = 235 bits (600), Expect = 4e-62, Method: Composition-based stats. Identities = 111/159 (69%), Positives = 131/159 (82%), Gaps = 4/159 (2%) Query 2 AGAGPHPTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNY 61 A AG +P SLY+GDLHP++TEAML+E F+ GPV SIRVCRD ++RRSLGYAYVN+ Sbjct 4 ATAGSYPM---ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNF 60 Query 62 QSLGDAERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTF 121 Q DAERALD +NF +++G+P RIMWSQRDPSLR+SG GNVF+KNLDKSIDNKALYDTF Sbjct 61 QQPADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTF 120 Query 122 SLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 S FGNILSCKV DE N S+GY FVH+ET+ +A AIEK Sbjct 121 SAFGNILSCKVVCDE-NGSKGYAFVHFETQDAADRAIEK 158 Score = 75.9 bits (185), Expect = 5e-14, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 8/153 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D S GYA+V++++ A+RA++ Sbjct 101 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEK 158 Query 74 LNFALIRGQPCRI-MWSQRDPSLRRSGAG-----NVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + + R GA NV++KN +D++ L + F +G Sbjct 159 MNGMLLNDRKVFVGRFKSRKEREAEMGAKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKT 218 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LS KV D +SRG+GFV YE A A+E+ Sbjct 219 LSVKVMTDPTGKSRGFGFVSYEKHEDANKAVEE 251 Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ + L E+F+ G S++V D + S G+ +V+Y+ DA +A++ Sbjct 193 NVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDPTGK-SRGFGFVSYEKHEDANKAVEE 251 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 +N + G+ + +Q R L+R N+++KNLD +ID++ L Sbjct 252 MNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 311 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 FS FG+I S KV ++E RS+G+GFV + + A A+ Sbjct 312 RKEFSPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAV 351 Score = 37.0 bits (84), Expect = 0.026, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LYI +L + + L + F+ G +TS +V + RS G+ +V + S +A + Sbjct 292 YQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--EGRSKGFGFVCFSSPEEATK 349 Query 70 ALDALNFALIRGQPCRIMWSQR 91 A+ +N ++ +P + +QR Sbjct 350 AVTEMNGRIVGSKPLYVALAQR 371 > bbo:BBOV_IV008280 23.m06515; polyadenylate binding protein; K13126 polyadenylate-binding protein Length=585 Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 107/152 (70%), Positives = 127/152 (83%), Gaps = 0/152 (0%) Query 9 TYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAE 68 ++ S SLY+G+L PEVTEAML+EVFN +GPV SIRVCRDS++R+SLGYAYVNY + DAE Sbjct 32 SFNSASLYVGNLLPEVTEAMLYEVFNGIGPVASIRVCRDSLTRKSLGYAYVNYYNFQDAE 91 Query 69 RALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNIL 128 AL+ LN+ I+GQP RIMWS+RDPSLR+SG GN+FVKNLDK+ID KALYDTFS FG IL Sbjct 92 AALECLNYIEIKGQPARIMWSERDPSLRKSGTGNIFVKNLDKAIDTKALYDTFSHFGTIL 151 Query 129 SCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 SCKV +D S+GYGFVHY TE SA+ AIEK Sbjct 152 SCKVAIDSLGNSKGYGFVHYTTEESAKEAIEK 183 Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 16/154 (10%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++++ +L + L++ F+ G + S +V DS+ S GY +V+Y + A+ A++ Sbjct 125 NIFVKNLDKAIDTKALYDTFSHFGTILSCKVAIDSLGN-SKGYGFVHYTTEESAKEAIEK 183 Query 74 LNFALIRGQPCRIMWSQRDPSLRR----SGAGNVF----VKNLDKSIDNKALYDTFSLFG 125 +N LI + P LRR S G+VF V+N + L+ TFS +G Sbjct 184 VNGMLIGNSQVSVA-----PFLRRNERTSTVGDVFTNLYVRNFPDTWTEDDLHQTFSKYG 238 Query 126 NILSCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 I S + D+ + R + FV++ A++A+E Sbjct 239 EITSLLLKSDD--KGRRFAFVNFVDTNMAKAAME 270 Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 29/167 (17%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LY+ + TE L + F+ G +TS+ + D RR +A+VN+ A+ A++ Sbjct 215 NLYVRNFPDTWTEDDLHQTFSKYGEITSLLLKSDDKGRR---FAFVNFVDTNMAKAAMEG 271 Query 74 LN----------------------FALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKS 111 N +A+++ Q QR+ + N+++KNLD Sbjct 272 ENGVKFESVEEPMMVCQHMDKARRYAMLKAQYDSNAQDQRNKFM----GVNLYIKNLDDD 327 Query 112 IDNKALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 D+ L D F +G + S KV D SRG+GFV + A A+ Sbjct 328 FDDDGLRDLFKQYGTVTSSKVMRDHNGVSRGFGFVCFSRPDEATKAV 374 Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRD--SVSRRSLGYAYVNYQSLGDA 67 ++ +LYI +L + + L ++F G VTS +V RD VSR G+ +V + +A Sbjct 314 FMGVNLYIKNLDDDFDDDGLRDLFKQYGTVTSSKVMRDHNGVSR---GFGFVCFSRPDEA 370 Query 68 ERALDALNFALIRGQPCRIMWSQR 91 +A+ ++ L++ +P + +++ Sbjct 371 TKAVAGMHLKLVKNKPLYVGLAEK 394 > xla:379896 pabpc1-a, MGC53109, pab1, pabp, pabp1, pabpc1, pabpc2; poly(A) binding protein, cytoplasmic 1; K13126 polyadenylate-binding protein Length=633 Score = 235 bits (599), Expect = 6e-62, Method: Composition-based stats. Identities = 108/153 (70%), Positives = 129/153 (84%), Gaps = 1/153 (0%) Query 8 PTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDA 67 P+Y SLY+GDLH +VTEAML+E F+ GP+ SIRVCRD ++RRSLGYAYVN+Q DA Sbjct 6 PSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADA 65 Query 68 ERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 ERALD +NF +I+G+P RIMWSQRDPSLR+SG GN+F+KNLDKSIDNKALYDTFS FGNI Sbjct 66 ERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 125 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LSCKV DE N S+GYGFVH+ET+ +A AI+K Sbjct 126 LSCKVVCDE-NGSKGYGFVHFETQEAAERAIDK 157 Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 82/153 (53%), Gaps = 8/153 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D S GY +V++++ AERA+D Sbjct 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDK 157 Query 74 LNFALIRGQPCRI----MWSQRDPSL--RRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + +R+ L R NV++KN ++++ L + F +G Sbjct 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPA 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LS KV D+ +S+G+GFV +E A+ A+++ Sbjct 218 LSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDE 250 Score = 66.2 bits (160), Expect = 4e-11, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ + L E+F GP S++V D + +S G+ +V+++ DA++A+D Sbjct 192 NVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDE 250 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 + + G+ + +Q R L+R N++VKNLD ID++ L Sbjct 251 MYGKDMNGKSMFVGRAQKKVERQTELKRKFEQMNQDRITRYQGVNLYVKNLDDGIDDERL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 F FG I S KV + E RS+G+GFV + + A A+ Sbjct 311 RKEFLPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAV 350 Score = 38.1 bits (87), Expect = 0.013, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query 92 DPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFN-RSRGYGFVHYET 150 +PS +++V +L + + LY+ FS G ILS +V D RS GY +V+++ Sbjct 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61 Query 151 EASARSAIE 159 A A A++ Sbjct 62 PADAERALD 70 Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L + F G +TS +V + RS G+ +V + S +A + Sbjct 291 YQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQR 91 A+ +N ++ +P + +QR Sbjct 349 AVTEMNGRIVATKPLYVALAQR 370 > hsa:8761 PABPC4, APP-1, APP1, FLJ43938, PABP4, iPABP; poly(A) binding protein, cytoplasmic 4 (inducible form); K13126 polyadenylate-binding protein Length=660 Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 109/152 (71%), Positives = 127/152 (83%), Gaps = 1/152 (0%) Query 9 TYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAE 68 +Y SLY+GDLH +VTEAML+E F+ GPV SIRVCRD ++RRSLGYAYVN+Q DAE Sbjct 7 SYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAE 66 Query 69 RALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNIL 128 RALD +NF +I+G+P RIMWSQRDPSLR+SG GNVF+KNLDKSIDNKALYDTFS FGNIL Sbjct 67 RALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126 Query 129 SCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 SCKV DE N S+GY FVH+ET+ +A AIEK Sbjct 127 SCKVVCDE-NGSKGYAFVHFETQEAADKAIEK 157 Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + EV + L E+F+ G S++V RD + +S G+ +V+Y+ DA +A++ Sbjct 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEE 250 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 +N I G+ + +Q R L+R N+++KNLD +ID++ L Sbjct 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 FS FG+I S KV +++ RS+G+GFV + + A A+ Sbjct 311 RKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350 Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 8/153 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D S GYA+V++++ A++A++ Sbjct 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157 Query 74 LNFALIRGQPCRI-MWSQRDPSLRRSGAG-----NVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + + R GA NV++KN + +D+++L + FS FG Sbjct 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKT 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LS KV D +S+G+GFV YE A A+E+ Sbjct 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250 Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LYI +L + + L + F+ G +TS +V + RS G+ +V + S +A + Sbjct 291 YQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQR 91 A+ +N ++ +P + +QR Sbjct 349 AVTEMNGRIVGSKPLYVALAQR 370 > mmu:230721 Pabpc4, MGC11665, MGC6685; poly(A) binding protein, cytoplasmic 4; K13126 polyadenylate-binding protein Length=660 Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 108/152 (71%), Positives = 127/152 (83%), Gaps = 1/152 (0%) Query 9 TYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAE 68 +Y SLY+GDLH +VTEAML+E F+ GPV SIRVCRD ++RRSLGYAYVN+Q DAE Sbjct 7 SYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAE 66 Query 69 RALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNIL 128 RALD +NF +++G+P RIMWSQRDPSLR+SG GNVF+KNLDKSIDNKALYDTFS FGNIL Sbjct 67 RALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126 Query 129 SCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 SCKV DE N S+GY FVH+ET+ +A AIEK Sbjct 127 SCKVVCDE-NGSKGYAFVHFETQEAADKAIEK 157 Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + EV + L E+F+ G S++V RDS S +S G+ +V+Y+ DA +A++ Sbjct 192 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEE 250 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 +N + G+ + +Q R L+R N+++KNLD +ID++ L Sbjct 251 MNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 FS FG+I S KV +++ RS+G+GFV + + A A+ Sbjct 311 RREFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAV 350 Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 8/153 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D S GYA+V++++ A++A++ Sbjct 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEK 157 Query 74 LNFALIRGQPCRI-MWSQRDPSLRRSGAG-----NVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + + R GA NV++KN + +D+ L + FS FG Sbjct 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LS KV D +S+G+GFV YE A A+E+ Sbjct 218 LSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEE 250 Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LYI +L + + L F+ G +TS +V + RS G+ +V + S +A + Sbjct 291 YQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQR 91 A+ +N ++ +P + +QR Sbjct 349 AVTEMNGRIVGSKPLYVALAQR 370 > dre:393856 pabpc1b, MGC77608, pabpc1, zgc:77608; poly A binding protein, cytoplasmic 1 b; K13126 polyadenylate-binding protein Length=634 Score = 233 bits (594), Expect = 2e-61, Method: Composition-based stats. Identities = 108/153 (70%), Positives = 128/153 (83%), Gaps = 1/153 (0%) Query 8 PTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDA 67 P+Y SLY+GDLH +VTEAML+E F+ G + SIRVCRD ++RRSLGYAYVN+Q DA Sbjct 6 PSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADA 65 Query 68 ERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 ERALD +NF +I+G+P RIMWSQRDPSLR+SG GN+F+KNLDKSIDNKALYDTFS FGNI Sbjct 66 ERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 125 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LSCKV DE N S+GYGFVH+ET+ +A AIEK Sbjct 126 LSCKVVCDE-NGSKGYGFVHFETQEAAERAIEK 157 Score = 79.0 bits (193), Expect = 6e-15, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 84/153 (54%), Gaps = 8/153 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D S GY +V++++ AERA++ Sbjct 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157 Query 74 LNFALIRGQPCRI----MWSQRDPSL--RRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + +R+ L R NV++KN + +D+ L D FS +GN Sbjct 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDDKLKDIFSKYGNA 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 +S +V DE +SRG+GFV +E A+ A+++ Sbjct 218 MSIRVMTDENGKSRGFGFVSFERHEDAQRAVDE 250 Score = 72.0 bits (175), Expect = 8e-13, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ + L ++F+ G SIRV D + +S G+ +V+++ DA+RA+D Sbjct 192 NVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQRAVDE 250 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 +N + G+ + +Q R L+R N++VKNLD ID++ L Sbjct 251 MNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 FS FG I S KV +D RS+G+GFV + + A A+ Sbjct 311 RKEFSPFGTITSAKVMMDG-GRSKGFGFVCFSSPEEATKAV 350 Score = 38.1 bits (87), Expect = 0.011, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query 92 DPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFN-RSRGYGFVHYET 150 +PS +++V +L + + LY+ FS G ILS +V D RS GY +V+++ Sbjct 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61 Query 151 EASARSAIE 159 A A A++ Sbjct 62 PADAERALD 70 Score = 37.4 bits (85), Expect = 0.019, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L + F+ G +TS +V D RS G+ +V + S +A + Sbjct 291 YQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMD--GGRSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQR 91 A+ +N ++ +P + +QR Sbjct 349 AVTEMNGRIVATKPLYVALAQR 370 > tpv:TP01_0945 polyadenylate binding protein; K13126 polyadenylate-binding protein Length=661 Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 110/151 (72%), Positives = 124/151 (82%), Gaps = 0/151 (0%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 + S SLY+GDL P+VTEA+L+EVFN VGPV SIRVCRDSV+R+SLGYAYVNY S DA+ Sbjct 24 FSSASLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAQE 83 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILS 129 AL+ LN+ I+G P RIMWS RDPSLRRSGAGN+FVKNLDKSID K+LYDTFS FG ILS Sbjct 84 ALENLNYIEIKGHPTRIMWSNRDPSLRRSGAGNIFVKNLDKSIDTKSLYDTFSHFGPILS 143 Query 130 CKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 CKV VD S+ YGFVHYE E SAR AIEK Sbjct 144 CKVAVDASGASKRYGFVHYENEESAREAIEK 174 Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 29/167 (17%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LY+ + + E L + G +TS+ + DS RR +A+VNY+ A+ ++ Sbjct 204 NLYVRNFPADWDEEALRQFLEKYGEITSMMLKEDSKGRR---FAFVNYKEPEVAKEVVNT 260 Query 74 LN----------------------FALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKS 111 LN L+R Q +Q D + N+++KNLD S Sbjct 261 LNDLKLEESSEPLLVCPHQDKAKRQNLLRAQFNNSTMAQED----KRVTSNLYIKNLDDS 316 Query 112 IDNKALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 D+++L + F FG I S KV +D N SRG+GFV + A AI Sbjct 317 FDDESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATKAI 363 > mmu:100503296 polyadenylate-binding protein 4-like Length=234 Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 108/152 (71%), Positives = 127/152 (83%), Gaps = 1/152 (0%) Query 9 TYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAE 68 +Y SLY+GDLH +VTEAML+E F+ GPV SIRVCRD ++RRSLGYAYVN+Q DAE Sbjct 7 SYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAE 66 Query 69 RALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNIL 128 RALD +NF +++G+P RIMWSQRDPSLR+SG GNVF+KNLDKSIDNKALYDTFS FGNIL Sbjct 67 RALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNIL 126 Query 129 SCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 SCKV DE N S+GY FVH+ET+ +A AIEK Sbjct 127 SCKVVCDE-NGSKGYAFVHFETQEAADKAIEK 157 Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 8/137 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D S GYA+V++++ A++A++ Sbjct 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEK 157 Query 74 LNFALIRGQPCRI-MWSQRDPSLRRSGAG-----NVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + + R GA NV++KN + +D+ L + FS FG Sbjct 158 MNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 217 Query 128 LSCKVGVDEFNRSRGYG 144 LS KV D +S+G+G Sbjct 218 LSVKVMRDSSGKSKGFG 234 > mmu:67543 Pabpc6, 4932702K14Rik, AI428050, MGC132900, Pabpc3; poly(A) binding protein, cytoplasmic 6; K13126 polyadenylate-binding protein Length=643 Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 107/153 (69%), Positives = 127/153 (83%), Gaps = 1/153 (0%) Query 8 PTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDA 67 P+Y SLY+GDLHP+VTEAML+E F+ GP+ SIRV RD ++RRSLGYA VN+Q L DA Sbjct 6 PSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDA 65 Query 68 ERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 ERALD +NF +I+G+P RIMWSQRDPSLR+SG GN+FVKNLD+SID+K LYDTFS FGNI Sbjct 66 ERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNI 125 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LSCKV DE N S+GYGFVH+ET+ A AIEK Sbjct 126 LSCKVVCDE-NGSKGYGFVHFETQEEAERAIEK 157 Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 86/156 (55%), Gaps = 14/156 (8%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++++ +L + L++ F+A G + S +V D S GY +V++++ +AERA++ Sbjct 100 NIFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEEAERAIEK 157 Query 74 LNFALIRGQPCRI--MWSQRDPSLRRSGAG-------NVFVKNLDKSIDNKALYDTFSLF 124 +N + + S+RD R++ G NV++KNL + +D++ L D F F Sbjct 158 MNGMFLNDHKVFVGRFKSRRD---RQAELGARAKEFTNVYIKNLGEDMDDERLQDLFGRF 214 Query 125 GNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 G LS KV DE +S+G+GFV +E AR A+E+ Sbjct 215 GPALSVKVMTDESGKSKGFGFVSFERHEDARKAVEE 250 Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 30/172 (17%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI +L ++ + L ++F GP S++V D S +S G+ +V+++ DA +A++ Sbjct 192 NVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVEE 250 Query 74 LN---------------------------FALIRGQPCRIMWSQRDPSLRRSGAGNVFVK 106 +N F ++ +I +D S+R G N++VK Sbjct 251 MNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGV-NLYVK 309 Query 107 NLDKSIDNKALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 NLD ID++ L FS FG I S KV + E RS+G+GFV + + A A+ Sbjct 310 NLDDGIDDERLRKEFSPFGTITSAKVTM-EGGRSKGFGFVCFSSPEEATKAV 360 > xla:443777 pabpc1l-b, MGC81363, epab, epabp-b, pabpc1l1; poly(A) binding protein, cytoplasmic 1-like; K13126 polyadenylate-binding protein Length=629 Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 105/150 (70%), Positives = 124/150 (82%), Gaps = 1/150 (0%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y SLYIGDLHP+VTEAML+E F+ GP+ SIRVCRD +RRSLGYAY+N+Q DAER Sbjct 8 YPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAER 67 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILS 129 ALD +NF +I+G+P RIMWSQRDP LR+SG GNVF+KNLD SIDNKALYDTFS FG+ILS Sbjct 68 ALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILS 127 Query 130 CKVGVDEFNRSRGYGFVHYETEASARSAIE 159 CKV DE+ SRGYGFVH+ET+ +A AI+ Sbjct 128 CKVVCDEYG-SRGYGFVHFETQEAANRAIQ 156 Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/151 (31%), Positives = 81/151 (53%), Gaps = 8/151 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D R GY +V++++ A RA+ Sbjct 100 NVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSR--GYGFVHFETQEAANRAIQT 157 Query 74 LNFALIRGQPCRI--MWSQRDPSLRRSGA----GNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + S+R+ L NV++KN + +D+K L + FS FGN Sbjct 158 MNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNT 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 LS KV +D RSRG+GFV+Y A+ A+ Sbjct 218 LSVKVMMDNSGRSRGFGFVNYGNHEEAQKAV 248 Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ + L E+F+A G S++V D+ S RS G+ +VNY + +A++A+ Sbjct 192 NVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTE 250 Query 74 LNFALIRGQPCRIMWSQR----------------DPSLRRSGAGNVFVKNLDKSIDNKAL 117 +N + G+ + +Q+ + R N++VKNLD ID+ L Sbjct 251 MNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 FS +G I S KV + E S+G+GFV + + A A+ Sbjct 311 RKEFSPYGTITSTKV-MTEGGHSKGFGFVCFSSPEEATKAV 350 Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 3/99 (3%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L + F+ G +TS +V + S G+ +V + S +A + Sbjct 291 YQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTE--GGHSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNL 108 A+ +N ++ +P + +QR R++ N +++ L Sbjct 349 AVTEMNGRIVSTKPLYVALAQRKEE-RKAILTNQYMQRL 386 > xla:398221 pabpc1l-a, MGC82273, ePAB, epabp-a, pabpc1l1; poly(A) binding protein, cytoplasmic 1-like; K13126 polyadenylate-binding protein Length=629 Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 108/158 (68%), Positives = 125/158 (79%), Gaps = 5/158 (3%) Query 2 AGAGPHPTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNY 61 GAG Y SLYIGDLHP+VTEAML+E F+ GP+ SIRVCRD +RRSL YAY+N+ Sbjct 4 TGAG----YPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINF 59 Query 62 QSLGDAERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTF 121 Q DAERALD +NF +I+G+P RIMWSQRDP LR+SG GNVF+KNLD+SIDNKALYDTF Sbjct 60 QQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTF 119 Query 122 SLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 S FGNILSCKV DE SRGYGFVH+ET +A AI+ Sbjct 120 SAFGNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQ 156 Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/151 (31%), Positives = 82/151 (54%), Gaps = 8/151 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+A G + S +V D R GY +V++++ A RA+ Sbjct 100 NVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSR--GYGFVHFETHEAANRAIQT 157 Query 74 LNFALIRGQPCRI--MWSQRDPSLRRSGA----GNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + S+R+ L NV++KN + +D+K L + FS FGN Sbjct 158 MNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNT 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 LS KV +D+ RSRG+GFV+Y A+ A+ Sbjct 218 LSVKVMMDDSGRSRGFGFVNYGNHEEAQKAV 248 Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ + L E+F+A G S++V D S RS G+ +VNY + +A++A+ Sbjct 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSE 250 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 +N + G+ + +Q R L+R N++VKNLD ID+ L Sbjct 251 MNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 F +G I S KV + E S+G+GFV + + A A+ Sbjct 311 RKEFLPYGTITSAKV-MTEGGHSKGFGFVCFSSPEEATKAV 350 Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 3/99 (3%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L + F G +TS +V + S G+ +V + S +A + Sbjct 291 YQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTE--GGHSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNL 108 A+ +N ++ +P + +QR R++ N +++ L Sbjct 349 AVTEMNGRIVSTKPLYVALAQRKEE-RKAILTNQYMQRL 386 > mmu:18459 Pabpc2, PABP, PABP+, Pabp2; poly(A) binding protein, cytoplasmic 2; K13126 polyadenylate-binding protein Length=628 Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 105/147 (71%), Positives = 126/147 (85%), Gaps = 1/147 (0%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 SLY+GDLHP+VTEAML+E F++ GP+ SIRV RD ++RRSLGYA VN++ DAERALD Sbjct 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVG 133 +NF +I+G+P RIMWSQRDPSLRRSG GNVF+KNL+K+IDNKALYDTFS FGNILSCKV Sbjct 72 MNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVV 131 Query 134 VDEFNRSRGYGFVHYETEASARSAIEK 160 DE N S+G+GFVH+ETE +A AIEK Sbjct 132 SDE-NGSKGHGFVHFETEEAAERAIEK 157 Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 14/156 (8%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L+ + L++ F+A G + S +V D S G+ +V++++ AERA++ Sbjct 100 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDE--NGSKGHGFVHFETEEAAERAIEK 157 Query 74 LNFALIRGQPCRI----MWSQRDPSLRRSGAG-----NVFVKNLDKSIDNKALYDTFSLF 124 +N L+ + + +R+ L G G NV++KN +D++ L F F Sbjct 158 MNGMLLNDRKVFVGRFKSQKEREAEL---GTGTKEFTNVYIKNFGDRMDDETLNGLFGRF 214 Query 125 GNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 G ILS KV DE +S+G+GFV +E A+ A+++ Sbjct 215 GQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250 Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 20/164 (12%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + + + L +F G + S++V D +S G+ +V+++ DA++A+D Sbjct 192 NVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDE-GGKSKGFGFVSFERHEDAQKAVDE 250 Query 74 LNFALIRGQPCRIMWSQR-----------------DPSLRRSGAGNVFVKNLDKSIDNKA 116 +N + G+ + +Q+ D S+R G N++VKNLD ID++ Sbjct 251 MNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQGI-NLYVKNLDDGIDDER 309 Query 117 LYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 L FS FG I S KV + E RS+G+GFV + + A A+ + Sbjct 310 LQKEFSPFGTITSTKV-MTEGGRSKGFGFVCFSSPEEATKAVSE 352 Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 3/99 (3%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L + F+ G +TS +V + RS G+ +V + S +A + Sbjct 291 YQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE--GGRSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNL 108 A+ +N ++ +P + +QR R++ N +++ + Sbjct 349 AVSEMNGRIVATKPLYVALAQRKEE-RQAHLTNQYIQRM 386 > hsa:80336 PABPC1L, C20orf119, FLJ11840, FLJ30809, FLJ42053, PABPC1L1, dJ1069P2.3, ePAB; poly(A) binding protein, cytoplasmic 1-like; K13126 polyadenylate-binding protein Length=614 Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 102/149 (68%), Positives = 122/149 (81%), Gaps = 1/149 (0%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y SLY+GDLHP+VTEAML+E F+ GP+ SIRVCRD +RRSLGYAY+N+Q DAER Sbjct 8 YPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILS 129 ALD +NF +++GQP RIMWSQRDP LR+SG GN+F+KNL+ SIDNKALYDTFS FGNILS Sbjct 68 ALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127 Query 130 CKVGVDEFNRSRGYGFVHYETEASARSAI 158 CKV DE SRG+GFVH+ET +A+ AI Sbjct 128 CKVACDEHG-SRGFGFVHFETHEAAQQAI 155 Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 8/151 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+ G + S +V D R G+ +V++++ A++A++ Sbjct 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSR--GFGFVHFETHEAAQQAINT 157 Query 74 LNFALIRGQPCRI----MWSQRDPSL--RRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + +R+ L R N++VKNL +D + L D FS FG + Sbjct 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 LS KV D SR +GFV++E A+ A+ Sbjct 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAV 248 Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 24/164 (14%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++Y+ +L +V E L ++F+ G + S++V RD+ S S + +VN++ +A++A+ Sbjct 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVH 250 Query 74 LNFALIRGQPCRIMWSQR-------------------DPSLRRSGAGNVFVKNLDKSIDN 114 +N + G R++++ R LRR N++VKNLD SID+ Sbjct 251 MNGKEVSG---RLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307 Query 115 KALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 L FS +G I S KV + E S+G+GFV + + A A+ Sbjct 308 DKLRKEFSPYGVITSAKV-MTEGGHSKGFGFVCFSSPEEATKAV 350 Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 3/99 (3%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L + F+ G +TS +V + S G+ +V + S +A + Sbjct 291 YQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNL 108 A+ +N ++ +P + +QR R++ N +++ L Sbjct 349 AVTEMNGRIVGTKPLYVALAQRKEE-RKAILTNQYMQRL 386 > dre:327625 pabpc1l, fi20g03, pab-2, wu:fi20g03, zgc:55855; poly(A) binding protein, cytoplasmic 1-like; K13126 polyadenylate-binding protein Length=620 Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 100/152 (65%), Positives = 124/152 (81%), Gaps = 1/152 (0%) Query 8 PTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDA 67 P Y SLY+GDLH +VTEAML++ F+ G + SIRVCRD ++RRSLGYAY+N+Q DA Sbjct 6 PAYPLASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPADA 65 Query 68 ERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 E ALD +N+ +I+G+P RIMWSQRDP LR+SG GN+F+KN+D+SIDNKALYDTFS FGNI Sbjct 66 ECALDTMNYEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNI 125 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 LSCKV DE N S+GYGFVH+ET+ +A AIE Sbjct 126 LSCKVVCDE-NGSKGYGFVHFETQEAANRAIE 156 Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 8/151 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I ++ + L++ F+A G + S +V D S GY +V++++ A RA++ Sbjct 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAANRAIET 157 Query 74 LNFALIRGQPCRI-MWSQRDPSLRRSGAG-----NVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + + R GA NV++KN + ID++ L + F+ FG Sbjct 158 MNGMLLNDRKVFVGHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFTEFGKT 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 LS V DE RSRG+GFV++ AR A+ Sbjct 218 LSVCVMTDERGRSRGFGFVNFVNHGDARRAV 248 Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ L +F G S+ V D R S G+ +VN+ + GDA RA+ Sbjct 192 NVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDERGR-SRGFGFVNFVNHGDARRAVTE 250 Query 74 LNFALIRGQPCRIMWSQR----------------DPSLRRSGAGNVFVKNLDKSIDNKAL 117 +N + G+ + +Q+ ++R N++VKNLD SID++ L Sbjct 251 MNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKNLDDSIDDEKL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 F+ +G I S KV D SRG+GFV + + A A+ Sbjct 311 RKEFAPYGTITSAKVMTDG-GHSRGFGFVCFSSPEEATKAV 350 Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 5/115 (4%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L + F G +TS +V D R G+ +V + S +A + Sbjct 291 YQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTDGGHSR--GFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLD--KSIDNKALYDTFS 122 A+ +N ++ +P + +QR R++ N +++ L ++I A+ T+ Sbjct 349 AVTEMNGRIVSTKPLYVALAQRKEE-RKAILTNQYIQRLASIRAIPGPAIPTTYQ 402 > hsa:5042 PABPC3, PABP3, PABPL3, tPABP; poly(A) binding protein, cytoplasmic 3; K13126 polyadenylate-binding protein Length=631 Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 101/153 (66%), Positives = 123/153 (80%), Gaps = 1/153 (0%) Query 8 PTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDA 67 P+Y + SLY+GDLHP+VTEAML+E F+ GP+ SIR+CRD ++ S YAYVN+Q DA Sbjct 6 PSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDA 65 Query 68 ERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 E ALD +NF +I+G+P RIMWSQRDPSLR+SG GN+FVKNLDKSI+NKALYDT S FGNI Sbjct 66 EHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNI 125 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LSC V DE N S+GYGFVH+ET +A AI+K Sbjct 126 LSCNVVCDE-NGSKGYGFVHFETHEAAERAIKK 157 Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 18/162 (11%) Query 13 PSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALD 72 P++YI + ++ + L ++F GP S++V D S +S G+ +V+++ DA++A+D Sbjct 191 PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVD 249 Query 73 ALNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKA 116 +N + G+ + +Q R L+R+ N++VKNLD ID++ Sbjct 250 EMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDER 309 Query 117 LYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 L FS FG I S KV + E RS+G+GFV + + A A+ Sbjct 310 LRKAFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAV 350 Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 8/153 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++++ +L + L++ +A G + S V D S GY +V++++ AERA+ Sbjct 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIKK 157 Query 74 LNFALIRGQPCRIMW----SQRDPSL--RRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ G+ + +R+ L R NV++KN + +D++ L D F FG Sbjct 158 MNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPA 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LS KV DE +S+G+GFV +E A+ A+++ Sbjct 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250 Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust. Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LY+ +L + + L + F+ G +TS +V + RS G+ +V + S +A +A+ Sbjct 295 NLYVKNLDDGIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTE 352 Query 74 LNFALIRGQPCRIMWSQR 91 +N ++ +P + +QR Sbjct 353 MNGRIVATKPLYVALAQR 370 Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query 92 DPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFNR-SRGYGFVHYET 150 +PS +++V +L + LY+ FS G ILS ++ D S Y +V+++ Sbjct 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61 Query 151 EASARSAIE 159 A A++ Sbjct 62 TKDAEHALD 70 > cpv:cgd6_3010 poly(a)-binding protein fabm ; K13126 polyadenylate-binding protein Length=746 Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 99/150 (66%), Positives = 122/150 (81%), Gaps = 0/150 (0%) Query 11 VSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERA 70 VS SLY+GDL +VTE ML+E+FN+V V+S+R+CRD+++RRSLGYAYVNY S+ DAERA Sbjct 10 VSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69 Query 71 LDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSC 130 LD LNF IRG+PCRIMW RDP+ RR+ GNVFVKNLDKSIDNK L+DTFSLFGNI+SC Sbjct 70 LDTLNFTCIRGRPCRIMWCLRDPASRRNNDGNVFVKNLDKSIDNKTLFDTFSLFGNIMSC 129 Query 131 KVGVDEFNRSRGYGFVHYETEASARSAIEK 160 K+ D +S GYGF+H+E SA+ AI + Sbjct 130 KIATDVEGKSLGYGFIHFEHADSAKEAISR 159 Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 0/57 (0%) Query 102 NVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 N++VKNL SI+ + L F FG + S + DE SRG+GFV + + A AI Sbjct 364 NLYVKNLADSINEEDLRSMFEPFGTVSSVSIKTDESGVSRGFGFVSFLSPDEATKAI 420 Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Query 7 HPTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGD 66 H Y +LY+ +L + E L +F G V+S+ + D S S G+ +V++ S + Sbjct 357 HQRYQGVNLYVKNLADSINEEDLRSMFEPFGTVSSVSIKTDE-SGVSRGFGFVSFLSPDE 415 Query 67 AERALDALNFALIRGQPCRIMWSQR 91 A +A+ ++ L+RG+P + +R Sbjct 416 ATKAITEMHLKLVRGKPLYVGLHER 440 Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++Y+ + TE +L+++F G ++S+ + DS R + +VN+++ A+ A+ A Sbjct 191 NVYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKGRP---FGFVNFENPDSAKAAVAA 247 Query 74 LNFALI 79 L+ AL+ Sbjct 248 LHNALV 253 > mmu:668382 Pabpc1l2b-ps, EG668382, Pabpc1l2b, Rbm32b; poly(A) binding protein, cytoplasmic 1-like 2B, pseudogene; K13126 polyadenylate-binding protein Length=229 Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 100/153 (65%), Positives = 124/153 (81%), Gaps = 1/153 (0%) Query 7 HPTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGD 66 +P + + SLY+GDLHPEVTE+ML+E F+ GP+ SIR+CRD V+RRSLGYAYVNYQ D Sbjct 25 NPDFPTASLYVGDLHPEVTESMLYEKFSPAGPILSIRICRDKVTRRSLGYAYVNYQQPVD 84 Query 67 AERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGN 126 A+RAL+ +NF +I G+P RIMWSQRDPSLR+SG GNVF+KNL K+IDNKALY+ FS FGN Sbjct 85 AKRALETMNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGN 144 Query 127 ILSCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 ILSCKV DE +GYGFVH++ + SA AI+ Sbjct 145 ILSCKVACDE-KGPKGYGFVHFQKQESAERAID 176 Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L+ +F+A G + S +V D + GY +V++Q AERA+DA Sbjct 120 NVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPK--GYGFVHFQKQESAERAIDA 177 Query 74 LN 75 LN Sbjct 178 LN 179 > hsa:340529 PABPC1L2A, MGC168104, PABPC1L2B, RBM32A; poly(A) binding protein, cytoplasmic 1-like 2A; K13126 polyadenylate-binding protein Length=200 Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 100/146 (68%), Positives = 121/146 (82%), Gaps = 1/146 (0%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 SLY+GDLHPEVTEAML+E F+ GP+ SIR+CRD ++RRSLGYAYVNYQ DA+RAL+ Sbjct 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVG 133 LNF +I+G+P RIMWSQRDPSLR+SG GNVF+KNL K+IDNKALY+ FS FGNILSCKV Sbjct 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122 Query 134 VDEFNRSRGYGFVHYETEASARSAIE 159 DE +GYGFVH++ + SA AI+ Sbjct 123 CDE-KGPKGYGFVHFQKQESAERAID 147 Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L+ +F+A G + S +V D + GY +V++Q AERA+D Sbjct 91 NVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPK--GYGFVHFQKQESAERAIDV 148 Query 74 LN 75 +N Sbjct 149 MN 150 > hsa:645974 PABPC1L2B, MGC168104, PABPC1L2A, RBM32B; poly(A) binding protein, cytoplasmic 1-like 2B; K13126 polyadenylate-binding protein Length=200 Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 100/146 (68%), Positives = 121/146 (82%), Gaps = 1/146 (0%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 SLY+GDLHPEVTEAML+E F+ GP+ SIR+CRD ++RRSLGYAYVNYQ DA+RAL+ Sbjct 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVG 133 LNF +I+G+P RIMWSQRDPSLR+SG GNVF+KNL K+IDNKALY+ FS FGNILSCKV Sbjct 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122 Query 134 VDEFNRSRGYGFVHYETEASARSAIE 159 DE +GYGFVH++ + SA AI+ Sbjct 123 CDE-KGPKGYGFVHFQKQESAERAID 147 Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L+ +F+A G + S +V D + GY +V++Q AERA+D Sbjct 91 NVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPK--GYGFVHFQKQESAERAIDV 148 Query 74 LN 75 +N Sbjct 149 MN 150 > mmu:381404 Pabpc1l, 1810053B01Rik, Epab; poly(A) binding protein, cytoplasmic 1-like; K13126 polyadenylate-binding protein Length=607 Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 96/145 (66%), Positives = 120/145 (82%), Gaps = 1/145 (0%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 SLY+GDLHP+VTE+ML+E+F+ +G + SIRVCRD +RRSLGYAY+N+Q DAERALD Sbjct 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVG 133 +NF +I+GQP RIMWS RDP LR+SG GN+F+KNL+ SIDNKALYDTFS FG+ILS KV Sbjct 72 MNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVV 131 Query 134 VDEFNRSRGYGFVHYETEASARSAI 158 +E SRG+GFVH+ET +A+ AI Sbjct 132 YNEHG-SRGFGFVHFETHEAAQKAI 155 Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++Y+ +LH V E L ++F+ G + S++V RDS + +S G+ +VN++ +A++A+D Sbjct 192 NIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDH 250 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRS------------GAGNVFVKNLDKSIDNKAL 117 +N + GQ + +Q R L+R N++VKNLD SI+++ L Sbjct 251 MNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERL 310 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 + FS +G I S KV + E + S+G+GFV + + A A+ Sbjct 311 KEVFSTYGVITSAKV-MTESSHSKGFGFVCFSSPEEATKAV 350 Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 84/152 (55%), Gaps = 8/152 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L++ F+ G + S +V + R G+ +V++++ A++A++ Sbjct 100 NIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSR--GFGFVHFETHEAAQKAINT 157 Query 74 LNFALIRGQPCRI----MWSQRDPSL--RRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ + + +R+ L R G N++VKNL ++D + L D FS FGN+ Sbjct 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNM 217 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 S KV D +SRG+GFV++E A+ A++ Sbjct 218 QSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVD 249 Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 2/82 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L + + L EVF+ G +TS +V + S S G+ +V + S +A + Sbjct 291 YQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATK 348 Query 70 ALDALNFALIRGQPCRIMWSQR 91 A+ +N ++ +P + +QR Sbjct 349 AVTEMNGRIVGTKPLYVALAQR 370 > hsa:132430 PABPC4L, DKFZp686J06116; poly(A) binding protein, cytoplasmic 4-like; K13126 polyadenylate-binding protein Length=428 Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 93/151 (61%), Positives = 117/151 (77%), Gaps = 1/151 (0%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y SLY+GDLH +VTE +LF F+ VGPV SIR+CRD V+RRSLGYAYVN+ L DA++ Sbjct 65 YRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQK 124 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILS 129 ALD +NF +I+G+ R+MWSQRD LRRSG GNVF+KNLDKSIDNK LY+ FS FG ILS Sbjct 125 ALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 184 Query 130 CKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 KV D+ S+GY FVH++ +++A AIE+ Sbjct 185 SKVMSDD-QGSKGYAFVHFQNQSAADRAIEE 214 Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 90/155 (58%), Gaps = 12/155 (7%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L+E F+A G + S +V D + S GYA+V++Q+ A+RA++ Sbjct 157 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDD--QGSKGYAFVHFQNQSAADRAIEE 214 Query 74 LNFALIRGQPCRIMWSQ------RDPSLRRSGA--GNVFVKNLDKSIDNKALYDTFSLFG 125 +N L++G C++ + R+ LR + NV++KN +D++ L D FS +G Sbjct 215 MNGKLLKG--CKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYG 272 Query 126 NILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LS KV D +S+G+GFV +++ +A+ A+E+ Sbjct 273 KTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEE 307 Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 18/161 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++YI + ++ + L +VF+ G S++V DS S +S G+ +V++ S A++A++ Sbjct 249 NVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEE 307 Query 74 LNFALIRGQ---------------PCRIMWSQ-RDPSLRRSGAGNVFVKNLDKSIDNKAL 117 +N I GQ + M+ Q + +R +++KNLD +ID++ L Sbjct 308 MNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKL 367 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 + FS FG+I KV + E +S+G+G + + + A A+ Sbjct 368 RNEFSSFGSISRVKV-MQEEGQSKGFGLICFSSPEDATKAM 407 > xla:495336 hypothetical LOC495336 Length=711 Score = 197 bits (502), Expect = 1e-50, Method: Composition-based stats. Identities = 87/147 (59%), Positives = 113/147 (76%), Gaps = 0/147 (0%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 SLY+GDLHP++ + L F+ +GPV VCRD SR+SLGY YVN++ DAERAL+ Sbjct 3 SLYVGDLHPDINDDQLRMKFSEIGPVAVAHVCRDVTSRKSLGYGYVNFEDPKDAERALEQ 62 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVG 133 +N+ ++ G+P RIMWSQRDPSLR+SG GN+F+KNL K+I+ K LYDTFSLFG ILSCK+ Sbjct 63 MNYEVVMGRPIRIMWSQRDPSLRKSGLGNIFIKNLAKTIEQKELYDTFSLFGRILSCKIA 122 Query 134 VDEFNRSRGYGFVHYETEASARSAIEK 160 +DE S+GYGFVH+E E A+ AI+K Sbjct 123 MDENGNSKGYGFVHFENEECAKRAIQK 149 Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats. Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 18/162 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++Y+ + PE + L E+F G + S V +DS +S G+ +V Y + AE A+ A Sbjct 182 NIYVKNFPPETDDEKLKEMFTEFGEIKSACVMKDS-EGKSKGFGFVCYLNPEHAEAAVAA 240 Query 74 LNFALIRGQPCRIMWSQR--------------DPSLRRS---GAGNVFVKNLDKSIDNKA 116 ++ I G+ +QR + RRS N++VKNLD ID++ Sbjct 241 MHGKEIGGRSLYASRAQRKEERQEELKLRLEKQKAERRSKYVSNVNLYVKNLDDEIDDER 300 Query 117 LYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 L + FS +G I S KV D NRS+G+GFV + A A+ Sbjct 301 LKEIFSKYGPISSAKVMTDSNNRSKGFGFVCFTNPEQATKAV 342 Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 5/149 (3%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + + L++ F+ G + S ++ D + S GY +V++++ A+RA+ Sbjct 91 NIFIKNLAKTIEQKELYDTFSLFGRILSCKIAMDE-NGNSKGYGFVHFENEECAKRAIQK 149 Query 74 LNFALIRGQPCR----IMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILS 129 +N I G+ I S R R+ N++VKN D++ L + F+ FG I S Sbjct 150 VNNMSICGKVVYVGNFIPRSDRKSQNRKQKFNNIYVKNFPPETDDEKLKEMFTEFGEIKS 209 Query 130 CKVGVDEFNRSRGYGFVHYETEASARSAI 158 V D +S+G+GFV Y A +A+ Sbjct 210 ACVMKDSEGKSKGFGFVCYLNPEHAEAAV 238 > sce:YER165W PAB1; Pab1p; K13126 polyadenylate-binding protein Length=577 Score = 197 bits (502), Expect = 1e-50, Method: Composition-based stats. Identities = 85/148 (57%), Positives = 118/148 (79%), Gaps = 0/148 (0%) Query 12 SPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERAL 71 S SLY+GDL P V+EA L+++F+ +G V+SIRVCRD++++ SLGYAYVN+ +A+ Sbjct 37 SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAI 96 Query 72 DALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCK 131 + LN+ I+G+ CRIMWSQRDPSLR+ G+GN+F+KNL IDNKALYDTFS+FG+ILS K Sbjct 97 EQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSK 156 Query 132 VGVDEFNRSRGYGFVHYETEASARSAIE 159 + DE +S+G+GFVH+E E +A+ AI+ Sbjct 157 IATDENGKSKGFGFVHFEEEGAAKEAID 184 Score = 84.0 bits (206), Expect = 2e-16, Method: Composition-based stats. Identities = 46/154 (29%), Positives = 86/154 (55%), Gaps = 7/154 (4%) Query 12 SPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERAL 71 S +++I +LHP++ L++ F+ G + S ++ D + +S G+ +V+++ G A+ A+ Sbjct 125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAI 183 Query 72 DALNFALIRGQPCRIM----WSQRDPSLRRSGA--GNVFVKNLDKSIDNKALYDTFSLFG 125 DALN L+ GQ + +RD L + A N++VKN++ ++ + F+ FG Sbjct 184 DALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFG 243 Query 126 NILSCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 I+S + D + +G+GFV+YE A A+E Sbjct 244 PIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVE 277 Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 17/161 (10%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LY+ +++ E T+ E+F GP+ S + +D+ + G+ +VNY+ DA +A++A Sbjct 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLK-GFGFVNYEKHEDAVKAVEA 278 Query 74 LNFALIRGQPCRIMWSQ----------------RDPSLRRSGAGNVFVKNLDKSIDNKAL 117 LN + + G+ + +Q R + + N+FVKNLD S+D++ L Sbjct 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 + F+ +G I S KV E +S+G+GFV + T A AI Sbjct 339 EEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAI 379 Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query 98 SGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFNR-SRGYGFVHYETEASARS 156 + + +++V +L+ S+ LYD FS G++ S +V D + S GY +V++ + R Sbjct 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94 Query 157 AIEK 160 AIE+ Sbjct 95 AIEQ 98 Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +L++ +L V + L E F G +TS +V R + + +S G+ +V + + +A + Sbjct 319 YQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMR-TENGKSKGFGFVCFSTPEEATK 377 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKN 107 A+ N ++ G+P + +QR R A + +N Sbjct 378 AITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 415 > mmu:241989 Pabpc4l, C330050A14Rik, EG241989; poly(A) binding protein, cytoplasmic 4-like; K13126 polyadenylate-binding protein Length=370 Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 92/154 (59%), Positives = 115/154 (74%), Gaps = 1/154 (0%) Query 7 HPTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGD 66 Y + SLY+GDLH +VTE MLF F+ VGPV SIR+CRD +S+RSLGYAYVN+ + D Sbjct 4 EAKYRAASLYVGDLHEDVTEDMLFRKFSTVGPVLSIRICRDLISQRSLGYAYVNFLQVND 63 Query 67 AERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGN 126 A++AL +NF +I+G+ R+MWSQRD LRRSG GNVF+KNLDKSIDNK LY+ FS FG Sbjct 64 AQKALVTMNFDVIKGKSIRLMWSQRDACLRRSGVGNVFIKNLDKSIDNKTLYEHFSPFGT 123 Query 127 ILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 I+S KV D S+GYGFVHY+ +A AIE+ Sbjct 124 IMSSKVMTDG-EGSKGYGFVHYQDRRAADRAIEE 156 Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 8/152 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L+E F+ G + S +V D S GY +V+YQ A+RA++ Sbjct 99 NVFIKNLDKSIDNKTLYEHFSPFGTIMSSKVMTDGEG--SKGYGFVHYQDRRAADRAIEE 156 Query 74 LNFALIRGQPCRIMW----SQRDPSLRRSGA--GNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+R + R+ LR NV++KN +D++ L + FS +G Sbjct 157 MNGKLLRESTLFVARFKSRKDREAELRDKPTEFTNVYIKNFGDDVDDEKLREVFSKYGQT 216 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 LS KV D +S+G+GFV +++ +A++A+E Sbjct 217 LSVKVMKDATGKSKGFGFVSFDSHEAAKNAVE 248 Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 19/157 (12%) Query 8 PTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDA 67 PT + ++YI + +V + L EVF+ G S++V +D+ + S G+ +V++ S A Sbjct 186 PTEFT-NVYIKNFGDDVDDEKLREVFSKYGQTLSVKVMKDATGK-SKGFGFVSFDSHEAA 243 Query 68 ERALDALNFALIRGQPCRI---------------MWSQ-RDPSLRRSGAGNVFVKNLDKS 111 + A++ +N I GQ + M+ Q + +R A +++KNLD + Sbjct 244 KNAVEDMNGQDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNLDDT 303 Query 112 IDNKALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHY 148 ID++ L FS+FG+I KV + E +S+G+G + + Sbjct 304 IDDETLRKEFSVFGSICRVKV-MQEAGQSKGFGLICF 339 > ath:AT4G34110 PAB2; PAB2 (POLY(A) BINDING 2); RNA binding / translation initiation factor; K13126 polyadenylate-binding protein Length=629 Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 89/147 (60%), Positives = 115/147 (78%), Gaps = 0/147 (0%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 SLY+GDL VT++ LF+ F +G V ++RVCRD V+RRSLGY YVN+ + DA RA+ Sbjct 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 96 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVG 133 LN+ + G+P R+M+S RDPS+RRSGAGN+F+KNLD+SID+KAL+DTFS FGNI+SCKV Sbjct 97 LNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVA 156 Query 134 VDEFNRSRGYGFVHYETEASARSAIEK 160 VD +S+GYGFV Y E SA+ AIEK Sbjct 157 VDSSGQSKGYGFVQYANEESAQKAIEK 183 Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 5/150 (3%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L + F++ G + S +V DS S +S GY +V Y + A++A++ Sbjct 125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEK 183 Query 74 LNFALIRGQPCRI----MWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILS 129 LN L+ + + +RD + ++ NV+VKNL +S + L + F +G I S Sbjct 184 LNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITS 243 Query 130 CKVGVDEFNRSRGYGFVHYETEASARSAIE 159 V D +S+G+GFV++E A A+E Sbjct 244 AVVMKDGEGKSKGFGFVNFENADDAARAVE 273 Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 17/163 (10%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++Y+ +L T+ L F G +TS V +D +S G+ +VN+++ DA RA+++ Sbjct 216 NVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDG-EGKSKGFGFVNFENADDAARAVES 274 Query 74 LNFALIRGQPCRI----MWSQRDPSLR------------RSGAGNVFVKNLDKSIDNKAL 117 LN + + S+R+ LR + + N++VKNLD SI ++ L Sbjct 275 LNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKL 334 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 + FS FG + S KV D S+G GFV + T A A+ + Sbjct 335 KEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQ 377 Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 + S +LY+ +L P +++ L E+F+ G VTS +V RD + S G +V + + +A Sbjct 315 FQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFATPEEATE 373 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLR 96 A+ L+ +I +P + +QR R Sbjct 374 AMSQLSGKMIESKPLYVAIAQRKEDRR 400 > ath:AT1G71770 PAB5; PAB5 (POLY(A)-BINDING PROTEIN 5); RNA binding / poly(A) binding / translation initiation factor Length=668 Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 92/152 (60%), Positives = 118/152 (77%), Gaps = 1/152 (0%) Query 9 TYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAE 68 T+ + SLY+GDL P V E+ L ++FN V PV ++RVCRD ++ RSLGYAYVN+ + DA Sbjct 41 THPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDAS 99 Query 69 RALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNIL 128 RA+++LN+A IR +P RIM S RDPS R SG GNVF+KNLD SIDNKALY+TFS FG IL Sbjct 100 RAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTIL 159 Query 129 SCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 SCKV +D RS+GYGFV +E E +A++AI+K Sbjct 160 SCKVAMDVVGRSKGYGFVQFEKEETAQAAIDK 191 Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 7/153 (4%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L+E F++ G + S +V D V R S GY +V ++ A+ A+D Sbjct 133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGR-SKGYGFVQFEKEETAQAAIDK 191 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAG------NVFVKNLDKSIDNKALYDTFSLFGNI 127 LN L+ + + R RS +G NV+VKNL K I + L TF +G+I Sbjct 192 LNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDI 251 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 S V D+ SR +GFV++ + +A A+EK Sbjct 252 SSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEK 284 Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 25/178 (14%) Query 1 DAGAGPHPTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVN 60 ++GA P T V Y+ +L E+T+ L + F G ++S V +D S S + +VN Sbjct 217 ESGAVPSFTNV----YVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVN 271 Query 61 YQSLGDAERALDALNF------ALIRGQPCRIMWSQRDPSLRRS------------GAGN 102 + S A A++ +N L G+ + S R+ LRR N Sbjct 272 FVSPEAAAVAVEKMNGISLGEDVLYVGRAQK--KSDREEELRRKFEQERISRFEKLQGSN 329 Query 103 VFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 +++KNLD S++++ L + FS +GN+ SCKV ++ SRG+GFV Y A A+++ Sbjct 330 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKE 387 > ath:AT1G49760 PAB8; PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor; K13126 polyadenylate-binding protein Length=671 Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 89/147 (60%), Positives = 113/147 (76%), Gaps = 0/147 (0%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 SLY+GDL VT++ LFE F G V S+RVCRD +RRSLGY YVNY + DA RAL+ Sbjct 46 SLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNE 105 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVG 133 LNF + G+ R+M+S RDPSLR+SG GN+F+KNLDKSID+KAL++TFS FG ILSCKV Sbjct 106 LNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCKVA 165 Query 134 VDEFNRSRGYGFVHYETEASARSAIEK 160 VD +S+GYGFV Y+T+ +A+ AI+K Sbjct 166 VDPSGQSKGYGFVQYDTDEAAQGAIDK 192 Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 5/150 (3%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + L E F+A GP+ S +V D S +S GY +V Y + A+ A+D Sbjct 134 NIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDP-SGQSKGYGFVQYDTDEAAQGAIDK 192 Query 74 LNFALIRGQPCRI----MWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILS 129 LN L+ + + QRDPS + NV+VKNL +S+ ++ L F FG S Sbjct 193 LNGMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTS 252 Query 130 CKVGVDEFNRSRGYGFVHYETEASARSAIE 159 C + D +S+G+GFV++E A A++ Sbjct 253 CVIMRDGEGKSKGFGFVNFENSDDAARAVD 282 Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 17/161 (10%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++Y+ +L +++ L +VF G TS + RD + S G+ +VN+++ DA RA+DA Sbjct 225 NVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGK-SKGFGFVNFENSDDAARAVDA 283 Query 74 LNFALIRGQPCRIMWSQR------------DPSLR----RSGAGNVFVKNLDKSIDNKAL 117 LN + + +Q+ + SL+ +S N++VKNLD+S+ + L Sbjct 284 LNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKL 343 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 + F+ FG I SCKV D SRG GFV + T A AI Sbjct 344 REHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAI 384 Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LY+ +L VT+ L E F G +TS +V RD S S G +V + + +A RA+ Sbjct 328 NLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDP-SGVSRGSGFVAFSTPEEATRAITE 386 Query 74 LNFALIRGQPCRIMWSQR 91 +N +I +P + +QR Sbjct 387 MNGKMIVTKPLYVALAQR 404 > ath:AT1G22760 PAB3; PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding / translation initiation factor Length=660 Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 91/152 (59%), Positives = 116/152 (76%), Gaps = 1/152 (0%) Query 9 TYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAE 68 T+ + SLY GDL P+VTEA LF++F V V S+RVCRD +RRSLGYAY+N+ + DA Sbjct 45 THPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQ-NRRSLGYAYINFSNPNDAY 103 Query 69 RALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNIL 128 RA++ALN+ + +P RIM S RDPS R SG GN+F+KNLD SIDNKAL++TFS FG IL Sbjct 104 RAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTIL 163 Query 129 SCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 SCKV +D RS+GYGFV +E E SA++AI+K Sbjct 164 SCKVAMDVTGRSKGYGFVQFEKEESAQAAIDK 195 Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 7/153 (4%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + LFE F++ G + S +V D V+ RS GY +V ++ A+ A+D Sbjct 137 NIFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDK 195 Query 74 LNFALIR------GQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 LN L+ G R RD + NV+VKNL K I L TF FG I Sbjct 196 LNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVI 255 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 S V D+ SR +GFV++E +A SA+EK Sbjct 256 SSAVVMRDQSGNSRCFGFVNFECTEAAASAVEK 288 Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 21/171 (12%) Query 8 PTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDA 67 PT ++Y+ +L E+ E L + F G ++S V RD S S + +VN++ A Sbjct 224 PTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAA 282 Query 68 ERALDALNF------ALIRGQPCRIMWSQRDPSLRR------------SGAGNVFVKNLD 109 A++ +N L G+ + S+R+ LRR S N+++KNLD Sbjct 283 ASAVEKMNGISLGDDVLYVGRAQK--KSEREEELRRKFEQERINRFEKSQGANLYLKNLD 340 Query 110 KSIDNKALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 S+D++ L + FS +GN+ S KV ++ SRG+GFV Y A A+ + Sbjct 341 DSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSE 391 Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LY+ +L V + L E+F+ G VTS +V + S G+ +V Y + +A RAL Sbjct 333 NLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGM-SRGFGFVAYSNPEEALRALSE 391 Query 74 LNFALIRGQPCRIMWSQR 91 +N +I +P I +QR Sbjct 392 MNGKMIGRKPLYIALAQR 409 > hsa:140886 PABPC5, FLJ51677, PABP5; poly(A) binding protein, cytoplasmic 5; K13126 polyadenylate-binding protein Length=382 Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 81/142 (57%), Positives = 106/142 (74%), Gaps = 1/142 (0%) Query 17 IGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDALNF 76 +GDL P+VTE ML++ F GP+ R+CRD V+R LGY YVN++ DAE AL+ +NF Sbjct 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81 Query 77 ALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDE 136 LI G+P R+MWSQ D LR+SG GN+F+KNLDKSIDN+AL+ FS FGNILSCKV D+ Sbjct 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141 Query 137 FNRSRGYGFVHYETEASARSAI 158 N S+GY +VH+++ A+A AI Sbjct 142 -NGSKGYAYVHFDSLAAANRAI 162 Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRV-CRDSVSRRSLGYAYVNYQSLGDAERALD 72 +++I +L + LF +F+A G + S +V C D+ S+ GYAYV++ SL A RA+ Sbjct 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSK---GYAYVHFDSLAAANRAIW 163 Query 73 ALNFALIRGQPCRI----MWSQRDPSLR---RSGAGNVFVKNLDKSIDNKALYDTFSLFG 125 +N + + + +R +R R+ NVFVKN+ ID++ L + F +G Sbjct 164 HMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYG 223 Query 126 NILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 S KV D +S+G+GFV YET +A+ A+ Sbjct 224 PTESVKVIRDASGKSKGFGFVRYETHEAAQKAV 256 Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 85/163 (52%), Gaps = 18/163 (11%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++++ ++ ++ + L E+F GP S++V RD+ S +S G+ +V Y++ A++A+ Sbjct 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLD 258 Query 74 LNFALIRGQPCRIMWSQRD----------------PSLRRSGAGNVFVKNLDKSIDNKAL 117 L+ I G+ + +Q+ R +++KNLD++I+++ L Sbjct 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKL 318 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 + FS FG+I KV + E + +G+G V + + A A+++ Sbjct 319 KEEFSSFGSISRAKVMM-EVGQGKGFGVVCFSSFEEATKAVDE 360 > mmu:93728 Pabpc5, C820015E17, MGC130340, MGC130341; poly(A) binding protein, cytoplasmic 5; K13126 polyadenylate-binding protein Length=381 Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 80/142 (56%), Positives = 106/142 (74%), Gaps = 1/142 (0%) Query 17 IGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDALNF 76 +GDL P+VTE ML++ F GP+ R+CRD V+R LGY YVN++ DAE AL+ +NF Sbjct 21 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 80 Query 77 ALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDE 136 LI G+P R+MWSQ D LR+SG GN+F+KNLDK+IDN+AL+ FS FGNILSCKV D+ Sbjct 81 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKTIDNRALFYLFSAFGNILSCKVVCDD 140 Query 137 FNRSRGYGFVHYETEASARSAI 158 N S+GY +VH+++ A+A AI Sbjct 141 -NGSKGYAYVHFDSLAAANRAI 161 Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 11/153 (7%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRV-CRDSVSRRSLGYAYVNYQSLGDAERALD 72 +++I +L + LF +F+A G + S +V C D+ S+ GYAYV++ SL A RA+ Sbjct 106 NIFIKNLDKTIDNRALFYLFSAFGNILSCKVVCDDNGSK---GYAYVHFDSLAAANRAIW 162 Query 73 ALNFALIRGQPCRI----MWSQRDPSLR---RSGAGNVFVKNLDKSIDNKALYDTFSLFG 125 +N + + + +R +R R+ NVFVKN ID++ L FS +G Sbjct 163 HMNGVRLNNRQVYVGRFKFPEERAAEVRTRERATFTNVFVKNFGDDIDDEKLNKLFSEYG 222 Query 126 NILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 S KV D +S+G+GFV YET +A+ A+ Sbjct 223 PTESVKVIRDATGKSKGFGFVRYETHEAAQKAV 255 Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 88/164 (53%), Gaps = 20/164 (12%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++++ + ++ + L ++F+ GP S++V RD+ + S G+ +V Y++ A++A+ Sbjct 199 NVFVKNFGDDIDDEKLNKLFSEYGPTESVKVIRDATGK-SKGFGFVRYETHEAAQKAVLE 257 Query 74 LNFALIRGQPCRIMWSQRD----PSLRR-------------SGAGNVFVKNLDKSIDNKA 116 L+ I G+ + +Q+ LRR SG +++KNLD++I+++ Sbjct 258 LHGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKEKNRPSGVP-IYIKNLDETINDEK 316 Query 117 LYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 L + FS FG+I KV + E + +G+G V + + A A+++ Sbjct 317 LKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFSSFEEACKAVDE 359 > ath:AT2G36660 PAB7; PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor Length=609 Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 76/149 (51%), Positives = 102/149 (68%), Gaps = 0/149 (0%) Query 11 VSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERA 70 V+ SLY+GDLHP VTE +L++ F +TS+R+C+D+ S RSL Y Y N+ S DA A Sbjct 22 VTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLA 81 Query 71 LDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSC 130 ++ N +L+ G+ R+MWS R P RR+G GNVFVKNL +S+ N L D F FGNI+SC Sbjct 82 IEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSC 141 Query 131 KVGVDEFNRSRGYGFVHYETEASARSAIE 159 KV E +SRGYGFV +E E +A +AI+ Sbjct 142 KVATLEDGKSRGYGFVQFEQEDAAHAAIQ 170 Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 21/171 (12%) Query 6 PHPTYVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLG 65 P Y + LY+ +L +V+E +L E F G + S+ + +D +R GYA+VN+ + Sbjct 196 PEEKYTN--LYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDE-NRLCRGYAFVNFDNPE 252 Query 66 DAERALDALNFALIRGQPCRIM-----WSQRDPSLRR------------SGAGNVFVKNL 108 DA RA + +N G C + ++R+ LR + N++VKN+ Sbjct 253 DARRAAETVNGTKF-GSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNV 311 Query 109 DKSIDNKALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 + ++ + L FS G I S K+ DE +S+G+GFV + T A A++ Sbjct 312 NVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVK 362 Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 7/150 (4%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVC--RDSVSRRSLGYAYVNYQSLGDAERAL 71 ++++ +L VT A+L ++F G + S +V D SR GY +V ++ A A+ Sbjct 113 NVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSR---GYGFVQFEQEDAAHAAI 169 Query 72 DALNFALIRGQPCRI--MWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILS 129 LN ++ + + + D N+++KNLD + L + F+ FG I+S Sbjct 170 QTLNSTIVADKEIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVS 229 Query 130 CKVGVDEFNRSRGYGFVHYETEASARSAIE 159 + DE RGY FV+++ AR A E Sbjct 230 LAIAKDENRLCRGYAFVNFDNPEDARRAAE 259 Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query 101 GNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFN-RSRGYGFVHYETEASARSAIE 159 +++V +L S+ LYD F+ F ++ S ++ D + RS YG+ ++ + A AIE Sbjct 24 ASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIE 83 Query 160 K 160 K Sbjct 84 K 84 > ath:AT2G23350 PAB4; PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor Length=662 Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 81/147 (55%), Positives = 107/147 (72%), Gaps = 0/147 (0%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 SLY+GDL VT++ L++ F V V S+RVCRD+ + SLGY YVNY + DAE+A+ Sbjct 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVG 133 LN++ + G+ RI +S RD S RRSG GN+FVKNLDKS+DNK L++ FS G I+SCKV Sbjct 107 LNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVA 166 Query 134 VDEFNRSRGYGFVHYETEASARSAIEK 160 D +SRGYGFV ++TE SA++AIEK Sbjct 167 TDHMGQSRGYGFVQFDTEDSAKNAIEK 193 Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 5/150 (3%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +L++ +L V L E F+ G + S +V D + + S GY +V + + A+ A++ Sbjct 135 NLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQ-SRGYGFVQFDTEDSAKNAIEK 193 Query 74 LNFALIRGQPCRI----MWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILS 129 LN ++ + + +R+ + + NV+VKNL ++ + L TF +G+I S Sbjct 194 LNGKVLNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISS 253 Query 130 CKVGVDEFNRSRGYGFVHYETEASARSAIE 159 V D +SR +GFV++E A A+E Sbjct 254 AVVMRDGDGKSRCFGFVNFENPEDAARAVE 283 Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 17/157 (10%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++Y+ +L T+ L F G ++S V RD +S + +VN+++ DA RA++A Sbjct 226 NVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDG-DGKSRCFGFVNFENPEDAARAVEA 284 Query 74 LNFALIRGQPCRI----MWSQRDPSLRR------SGAGNVF------VKNLDKSIDNKAL 117 LN + + S+R+ L R S GN F VKNLD ++ ++ L Sbjct 285 LNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKL 344 Query 118 YDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASA 154 + F+ FG I SCKV D S+G GFV + + A Sbjct 345 RELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEA 381 Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LY+ +L VT+ L E+F G +TS +V RD S S G +V + + +A R L+ Sbjct 329 NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDP-SGTSKGSGFVAFSAASEASRVLNE 387 Query 74 LNFALIRGQPCRIMWSQRDPSLR 96 +N ++ G+P + +QR R Sbjct 388 MNGKMVGGKPLYVALAQRKEERR 410 > cel:Y106G6H.2 pab-1; PolyA Binding protein family member (pab-1); K13126 polyadenylate-binding protein Length=583 Score = 152 bits (385), Expect = 3e-37, Method: Composition-based stats. Identities = 65/93 (69%), Positives = 82/93 (88%), Gaps = 0/93 (0%) Query 68 ERALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNI 127 ERA+D +NF + G+P RIMWSQRDP++RRSGAGN+F+KNLDK IDNK++YDTFSLFGNI Sbjct 24 ERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNI 83 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 LSCKV +DE S+GYGFVH+ETE +A++AI+K Sbjct 84 LSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQK 116 Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 20/163 (12%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++Y+ + + L ++F G +TS V +V +S G+ +V + + +AE A+ A Sbjct 151 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQA 208 Query 74 LNFALIRG-----QPCRIMW-SQRDPSLRRSGAG------------NVFVKNLDKSIDNK 115 L+ + I G CR S+R L++ N++VKNLD+++D+ Sbjct 209 LHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDD 268 Query 116 ALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAI 158 L F +GNI S KV DE RS+G+GFV +E A SA+ Sbjct 269 GLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAV 311 Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 8/152 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +++I +L + +++ F+ G + S +V D S GY +V++++ A+ A+ Sbjct 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQK 116 Query 74 LNFALIRGQPCRI----MWSQRDPSLRRSGA--GNVFVKNLDKSIDNKALYDTFSLFGNI 127 +N L+ G+ + +QR+ L + NV+VKN + + L F+ FGNI Sbjct 117 VNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNI 176 Query 128 LSCKVGVDEFNRSRGYGFVHYETEASARSAIE 159 SC+V E +S+G+GFV + A +A++ Sbjct 177 TSCEVMTVE-GKSKGFGFVAFANPEEAETAVQ 207 Score = 38.1 bits (87), Expect = 0.013, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 2/99 (2%) Query 10 YVSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAER 69 Y +LY+ +L V + L + F + G +TS +V D + RS G+ +V ++ +A Sbjct 251 YQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATS 309 Query 70 ALDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNL 108 A+ +N ++ +P + +QR RR+ + +++ L Sbjct 310 AVTEMNSKMVCSKPLYVAIAQRKED-RRAQLASQYMQRL 347 > ath:AT3G16380 PAB6; PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor Length=537 Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 72/147 (48%), Positives = 101/147 (68%), Gaps = 4/147 (2%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 SLY+GDL P+VTE L + F+ PV S+ +CR+SV+ +S+ YAY+N+ S A A+ Sbjct 22 SLYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMTR 81 Query 74 LNFALIRGQPCRIMWSQRDPSLR---RSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSC 130 LN + ++G+ RIMWSQRD + R R+G N++VKNLD SI + L F FG+ILSC Sbjct 82 LNHSDLKGKAMRIMWSQRDLAYRRRTRTGFANLYVKNLDSSITSSCLERMFCPFGSILSC 141 Query 131 KVGVDEFNRSRGYGFVHYETEASARSA 157 KV V+E +S+G+GFV ++TE SA SA Sbjct 142 KV-VEENGQSKGFGFVQFDTEQSAVSA 167 Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 22/164 (13%) Query 12 SPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERAL 71 S ++Y+ +L VT+ L +F+ G V+S+ V RD + R S G+ +VN+ + +A++A+ Sbjct 201 STNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGR-SRGFGFVNFCNPENAKKAM 259 Query 72 DAL------NFALIRGQPC-----RIMWSQR-------DPSLRRSGAGNVFVKNLDKSID 113 ++L + L G+ R M Q+ P++R S N++VKNL +S++ Sbjct 260 ESLCGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNMRWS---NLYVKNLSESMN 316 Query 114 NKALYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSA 157 L + F +G I+S KV E RS+G+GFV + ++ A Sbjct 317 ETRLREIFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQA 360 Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 6/150 (4%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LY+ +L +T + L +F G + S +V ++ +S G+ +V + + A A A Sbjct 113 NLYVKNLDSSITSSCLERMFCPFGSILSCKVVEEN--GQSKGFGFVQFDTEQSAVSARSA 170 Query 74 LNFALIRGQPCRI-MWSQRDPSLRRSG---AGNVFVKNLDKSIDNKALYDTFSLFGNILS 129 L+ +++ G+ + + +D +G + NV+VKNL +++ + L+ FS +G + S Sbjct 171 LHGSMVYGKKLFVAKFINKDERAAMAGNQDSTNVYVKNLIETVTDDCLHTLFSQYGTVSS 230 Query 130 CKVGVDEFNRSRGYGFVHYETEASARSAIE 159 V D RSRG+GFV++ +A+ A+E Sbjct 231 VVVMRDGMGRSRGFGFVNFCNPENAKKAME 260 > tgo:TGME49_024580 splicing factor, putative (EC:3.1.2.15); K12831 splicing factor 3B subunit 4 Length=576 Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 94/149 (63%), Gaps = 8/149 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LYIG+L +V + +L+E+F GPV ++ V RD ++ GY +V +++ DA+ AL Sbjct 30 TLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKL 89 Query 74 LNFALIRGQPCRIMWSQRDPSLRRS---GAGNVFVKNLDKSIDNKALYDTFSLFGNILSC 130 +N + G+ R+ S +D RR+ GA NVF+ NLD +D K +YDTFS FGNI+S Sbjct 90 MNMVKLYGKALRLNKSAQD---RRNFDVGA-NVFLGNLDPDVDEKTIYDTFSAFGNIISA 145 Query 131 KVGVD-EFNRSRGYGFVHYETEASARSAI 158 K+ D E SRG+GFV ++T ++ +A+ Sbjct 146 KIMRDPETGLSRGFGFVSFDTFEASDAAL 174 Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 47/79 (59%), Gaps = 0/79 (0%) Query 11 VSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERA 70 V ++++G+L P+V E +++ F+A G + S ++ RD + S G+ +V++ + ++ A Sbjct 114 VGANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAA 173 Query 71 LDALNFALIRGQPCRIMWS 89 L A+N I +P + ++ Sbjct 174 LAAMNGQFICNRPIHVSYA 192 Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query 103 VFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFNRS-RGYGFVHYETEASARSAIE 159 +++ NLD +D+ L++ F G + + V D+ + +GYGFV + E A A++ Sbjct 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALK 88 > ath:AT1G34140 PAB1; PAB1 (POLY(A) BINDING PROTEIN 1); RNA binding / translation initiation factor Length=407 Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 0/87 (0%) Query 71 LDALNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSC 130 ++ LN+ ++G+P RIM+S+RDPS R SG GNVFVKNLD+SIDNK L D FS FG +LSC Sbjct 1 MEVLNYCKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSC 60 Query 131 KVGVDEFNRSRGYGFVHYETEASARSA 157 KV D S+GYGFV + ++ S +A Sbjct 61 KVARDASGVSKGYGFVQFYSDLSVYTA 87 Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 18/164 (10%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++Y+ +L T+A L +F G +TS V +D +S + +VN++ A A++ Sbjct 120 NVYVKNLVETATDADLKRLFGEFGEITSAVVMKDG-EGKSRRFGFVNFEKAEAAVTAIEK 178 Query 74 LNFALIRGQPCRIMWSQRDPS-----------------LRRSGAGNVFVKNLDKSIDNKA 116 +N ++ + + +QR + ++ N++VKNLD S+DN Sbjct 179 MNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTK 238 Query 117 LYDTFSLFGNILSCKVGVDEFNRSRGYGFVHYETEASARSAIEK 160 L + FS FG I SCKV V S+G GFV + T A A+ K Sbjct 239 LEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLK 282 Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 2/148 (1%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++++ +L + L ++F+A G V S +V RD+ S S GY +V + S A + Sbjct 32 NVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDA-SGVSKGYGFVQFYSDLSVYTACNF 90 Query 74 LNFALIRGQPCRIM-WSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKV 132 N LIR Q + + R + NV+VKNL ++ + L F FG I S V Sbjct 91 HNGTLIRNQHIHVCPFVSRGQWDKSRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVV 150 Query 133 GVDEFNRSRGYGFVHYETEASARSAIEK 160 D +SR +GFV++E +A +AIEK Sbjct 151 MKDGEGKSRRFGFVNFEKAEAAVTAIEK 178 > sce:YFR023W PES4; Pes4p Length=611 Score = 103 bits (257), Expect = 2e-22, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 91/148 (61%), Gaps = 8/148 (5%) Query 15 LYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDAL 74 L+IGDLH VTE L +F S +VC DSV+++SLG+ Y+N++ +AE+A++ L Sbjct 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152 Query 75 NFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNL---DKSIDNKALYDTFSLFGNILSCK 131 N+ + G+ RIM S R+ + R++ NVF NL + + + YDTFS +G ILSCK Sbjct 153 NYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCK 212 Query 132 VGVDEFNRSRGYGFVHYETEASARSAIE 159 + + + GFV++E E +AR+ I+ Sbjct 213 L-----DSRKDIGFVYFEDEKTARNVIK 235 Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 9/141 (6%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 S++I +L T + F+ VGP+ SI + + ++ +A+V Y++ D+E+A+ Sbjct 304 SIFIKNLPTITTRDDILNFFSEVGPIKSIYL--SNATKVKYLWAFVTYKNSSDSEKAIKR 361 Query 74 LNFALIRGQPCRIMWSQ----RDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILS 129 N RG+ + +Q R + +F++NL ++ NK NI Sbjct 362 YNNFYFRGKKLLVTRAQDKEERAKFIESQKISTLFLENL-SAVCNKEFLKYLCHQENIRP 420 Query 130 CKVGVDEF--NRSRGYGFVHY 148 K+ +D + N S GF+ + Sbjct 421 FKIQIDGYDENSSTYSGFIKF 441 > bbo:BBOV_III006220 17.m07552; RNA recognition motif domaining containing protein; K12831 splicing factor 3B subunit 4 Length=280 Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 52/146 (35%), Positives = 88/146 (60%), Gaps = 2/146 (1%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 +LY+G++ +V E +L+E F VGPV + + RD V+ GYA+V + + DA+ A+ Sbjct 19 TLYVGNVDTQVDEELLWEFFVQVGPVKHLHIPRDKVTGHHQGYAFVEFDTDDDADYAIRI 78 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVG 133 LNF + +P R+ + RD GA N+F+ NLD +D+K L+DTF+ FGN++S V Sbjct 79 LNFVKLYNKPLRLNKASRDKQTFEIGA-NLFIGNLDPDVDDKQLHDTFASFGNVISANVV 137 Query 134 VD-EFNRSRGYGFVHYETEASARSAI 158 D + + + FV Y++ ++ +A+ Sbjct 138 RDGDATDRKAFAFVSYDSFEASDAAL 163 Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query 11 VSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERA 70 + +L+IG+L P+V + L + F + G V S V RD + +A+V+Y S ++ A Sbjct 103 IGANLFIGNLDPDVDDKQLHDTFASFGNVISANVVRDGDATDRKAFAFVSYDSFEASDAA 162 Query 71 LDALNFALIRGQPCRIMWS-QRDPSLRRSGAG 101 L A+N I +P + ++ ++D R G+ Sbjct 163 LAAMNGQFICNKPIHVSYAYKKDTKGERHGSA 194 > sce:YHR015W MIP6; Mip6p Length=659 Score = 102 bits (254), Expect = 6e-22, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 8/150 (5%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 SL+IG+L VTE ML ++F S +VCRD ++++SLGY Y+N++ DAE A Sbjct 112 SLFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESARKE 171 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNL---DKSIDNKALYDTFSLFGNILSC 130 N+ + GQ +IM S ++ R++ NVF NL + + ++ Y +GN+LSC Sbjct 172 FNYTVFFGQEVKIMPSMKNTLFRKNIGTNVFFSNLPLENPQLTTRSFYLIMIEYGNVLSC 231 Query 131 KVGVDEFNRSRGYGFVHYETEASARSAIEK 160 + R + GFV+++ + SAR+ I+K Sbjct 232 LL-----ERRKNIGFVYFDNDISARNVIKK 256 > ath:AT2G18510 emb2444 (embryo defective 2444); RNA binding / nucleic acid binding / nucleotide binding; K12831 splicing factor 3B subunit 4 Length=363 Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 90/148 (60%), Gaps = 3/148 (2%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++Y+G L +++E +L+E+F GPV ++ V +D V+ Y ++ Y+S DA+ A+ Sbjct 26 TVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKV 85 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILS-CKV 132 LN + G+P R+ + +D GA N+F+ NLD +D K LYDTFS FG I S K+ Sbjct 86 LNMIKLHGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIASNPKI 144 Query 133 GVD-EFNRSRGYGFVHYETEASARSAIE 159 D + SRG+GF+ Y++ ++ +AIE Sbjct 145 MRDPDTGNSRGFGFISYDSFEASDAAIE 172 Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Query 11 VSPSLYIGDLHPEVTEAMLFEVFNAVGPVTS-IRVCRDSVSRRSLGYAYVNYQSLGDAER 69 V +L+IG+L P+V E +L++ F+A G + S ++ RD + S G+ +++Y S ++ Sbjct 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDA 169 Query 70 ALDAL 74 A++++ Sbjct 170 AIESM 174 > xla:734673 hypothetical protein MGC116464 Length=391 Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 3/148 (2%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 S+YIG+L +V E +L+E GPV S+ + RD VS GY +V +++ DA+ AL Sbjct 12 SIYIGNLDSQVNEEILWECMLQAGPVLSVNMPRDKVSGFHQGYGFVEFKTEEDADYALKV 71 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSC-KV 132 +N + +P R + D + GA N+FV NL +D K L+DTFS FGN++S K+ Sbjct 72 MNMIKLYNKPIRCNKATTDKKIHDVGA-NLFVGNLAPEVDEKMLFDTFSQFGNLISTPKI 130 Query 133 GVD-EFNRSRGYGFVHYETEASARSAIE 159 D E S+G+ FV +++ A AI+ Sbjct 131 MKDPESGGSKGFAFVSFDSFDGADHAIQ 158 Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Query 11 VSPSLYIGDLHPEVTEAMLFEVFNAVGPVTSI-RVCRDSVSRRSLGYAYVNYQSLGDAER 69 V +L++G+L PEV E MLF+ F+ G + S ++ +D S S G+A+V++ S A+ Sbjct 96 VGANLFVGNLAPEVDEKMLFDTFSQFGNLISTPKIMKDPESGGSKGFAFVSFDSFDGADH 155 Query 70 ALDALNFALIRGQPCRIMWS-QRDPSLRRSGA 100 A+ ++N + + ++ ++D + R G+ Sbjct 156 AIQSMNGQFFYNKQIVVQYAYKKDSNGERYGS 187 Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query 94 SLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSCKVGVDEFNR-SRGYGFVHYETEA 152 S +R+ ++++ NLD ++ + L++ G +LS + D+ + +GYGFV ++TE Sbjct 4 SEQRNQEASIYIGNLDSQVNEEILWECMLQAGPVLSVNMPRDKVSGFHQGYGFVEFKTEE 63 Query 153 SARSAIE 159 A A++ Sbjct 64 DADYALK 70 > xla:379792 sf3b4, MGC52742, spx; splicing factor 3b, subunit 4, 49kDa Length=377 Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 3/148 (2%) Query 14 SLYIGDLHPEVTEAMLFEVFNAVGPVTSIRVCRDSVSRRSLGYAYVNYQSLGDAERALDA 73 ++Y+G L +V+E +L+E+F GPV + + +D V+ + GY +V + S DA+ A+ Sbjct 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73 Query 74 LNFALIRGQPCRIMWSQRDPSLRRSGAGNVFVKNLDKSIDNKALYDTFSLFGNILSC-KV 132 +N + G+P R+ + GA N+F+ NLD ID K LYDTFS FG IL K+ Sbjct 74 MNMIKLYGKPIRVNKASAHNKNLDVGA-NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKI 132 Query 133 GVD-EFNRSRGYGFVHYETEASARSAIE 159 D + S+GY F++Y + ++ +AIE Sbjct 133 MRDPDTGNSKGYAFINYASFDASDAAIE 160 Lambda K H 0.320 0.136 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 3712313100 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40