bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_7973_orf1
Length=81
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_112090 60S ribosomal protein L23, putative ; K02894... 105 3e-23
bbo:BBOV_III006390 17.m07569; ribosomal protein L14p/L23e; K02... 99.4 3e-21
tpv:TP02_0323 60S ribosomal protein L23; K02894 large subunit ... 98.6 4e-21
cpv:cgd6_570 60S ribosomal protein L23 ; K02894 large subunit ... 95.1 5e-20
pfa:PF13_0171 60S ribosomal protein L23, putative; K02894 larg... 92.4 3e-19
sce:YER117W RPL23B; Rpl23bp; K02894 large subunit ribosomal pr... 81.6 5e-16
sce:YBL087C RPL23A; Rpl23ap; K02894 large subunit ribosomal pr... 81.6 5e-16
dre:336812 rpl23, MGC73149, fb06e03, wu:fb06e03, zgc:73149; ri... 80.1 2e-15
dre:100329404 ribosomal protein L23-like 80.1 2e-15
mmu:65019 Rpl23, 2810009A01Rik; ribosomal protein L23; K02894 ... 79.0 3e-15
hsa:9349 RPL23, MGC111167, MGC117346, MGC72008, rpL17; ribosom... 79.0 3e-15
mmu:100044627 60S ribosomal protein L23-like 79.0 4e-15
ath:AT3G04400 emb2171 (embryo defective 2171); structural cons... 77.0 1e-14
ath:AT1G04480 60S ribosomal protein L23 (RPL23A) 77.0 1e-14
ath:AT2G33370 60S ribosomal protein L23 (RPL23B) 77.0 1e-14
xla:444350 rpl23, MGC82808; ribosomal protein L23; K02894 larg... 77.0 1e-14
cel:B0336.10 rpl-23; Ribosomal Protein, Large subunit family m... 74.7 7e-14
mmu:100039086 Gm15032, OTTMUSG00000018816; predicted gene 15032 67.0
> tgo:TGME49_112090 60S ribosomal protein L23, putative ; K02894
large subunit ribosomal protein L23e
Length=139
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 54/56 (96%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGG GG+KM+VTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLP+ SLGDL
Sbjct 4 GRGGVGGSKMRVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPACSLGDL 59
> bbo:BBOV_III006390 17.m07569; ribosomal protein L14p/L23e; K02894
large subunit ribosomal protein L23e
Length=139
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/56 (82%), Positives = 54/56 (96%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGGAGGNK++VTLGLPVGA+INCCDNSG KNLYIIAVKG G+CLNRLPS+++GD+
Sbjct 4 GRGGAGGNKLRVTLGLPVGAIINCCDNSGGKNLYIIAVKGIGACLNRLPSAAVGDM 59
> tpv:TP02_0323 60S ribosomal protein L23; K02894 large subunit
ribosomal protein L23e
Length=139
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/56 (82%), Positives = 54/56 (96%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGG+GGNK++VTLGLPVGALINCCDNSG KNLY+IAVKG G+CLNRLPS+S+GD+
Sbjct 4 GRGGSGGNKLRVTLGLPVGALINCCDNSGGKNLYLIAVKGTGACLNRLPSASVGDM 59
> cpv:cgd6_570 60S ribosomal protein L23 ; K02894 large subunit
ribosomal protein L23e
Length=146
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/56 (82%), Positives = 51/56 (91%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRG AGG KM++TLGL VGALINCCDNSG KNLYIIAVKG GSCLNRLPS+S+GD+
Sbjct 11 GRGAAGGAKMRITLGLNVGALINCCDNSGGKNLYIIAVKGTGSCLNRLPSASIGDM 66
> pfa:PF13_0171 60S ribosomal protein L23, putative; K02894 large
subunit ribosomal protein L23e
Length=139
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 50/56 (89%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GR G NKM++TL LPVGALINCCDNSG KNLYIIAV+G+GSCLNRLP++SLGD+
Sbjct 4 GRAGTLKNKMRITLSLPVGALINCCDNSGGKNLYIIAVQGFGSCLNRLPAASLGDM 59
> sce:YER117W RPL23B; Rpl23bp; K02894 large subunit ribosomal
protein L23e
Length=137
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 47/53 (88%), Gaps = 0/53 (0%)
Query 29 GAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GA G K +++LGLPVGA++NC DNSGA+NLYIIAVKG GS LNRLP++SLGD+
Sbjct 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDM 57
> sce:YBL087C RPL23A; Rpl23ap; K02894 large subunit ribosomal
protein L23e
Length=137
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 47/53 (88%), Gaps = 0/53 (0%)
Query 29 GAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GA G K +++LGLPVGA++NC DNSGA+NLYIIAVKG GS LNRLP++SLGD+
Sbjct 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDM 57
> dre:336812 rpl23, MGC73149, fb06e03, wu:fb06e03, zgc:73149;
ribosomal protein L23; K02894 large subunit ribosomal protein
L23e
Length=140
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 47/56 (83%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGG+ G K +++LGLPVGA+INC DN+GAKNLYII+VKG LNRLPS+ +GD+
Sbjct 5 GRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDM 60
> dre:100329404 ribosomal protein L23-like
Length=75
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 47/56 (83%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGG+ G K +++LGLPVGA+INC DN+GAKNLYII+VKG LNRLPS+ +GD+
Sbjct 5 GRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDM 60
> mmu:65019 Rpl23, 2810009A01Rik; ribosomal protein L23; K02894
large subunit ribosomal protein L23e
Length=140
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 47/56 (83%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGG+ G K +++LGLPVGA+INC DN+GAKNLYII+VKG LNRLP++ +GD+
Sbjct 5 GRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
> hsa:9349 RPL23, MGC111167, MGC117346, MGC72008, rpL17; ribosomal
protein L23; K02894 large subunit ribosomal protein L23e
Length=140
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 47/56 (83%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGG+ G K +++LGLPVGA+INC DN+GAKNLYII+VKG LNRLP++ +GD+
Sbjct 5 GRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
> mmu:100044627 60S ribosomal protein L23-like
Length=134
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 47/56 (83%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGG+ G K +++LGLPVGA+INC DN+GAKNLYII+VKG LNRLP++ +GD+
Sbjct 5 GRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
> ath:AT3G04400 emb2171 (embryo defective 2171); structural constituent
of ribosome; K02894 large subunit ribosomal protein
L23e
Length=140
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGG GNK +++LGLPV A +NC DN+GAKNLYII+VKG LNRLPS+ +GD+
Sbjct 5 GRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
> ath:AT1G04480 60S ribosomal protein L23 (RPL23A)
Length=140
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGG GNK +++LGLPV A +NC DN+GAKNLYII+VKG LNRLPS+ +GD+
Sbjct 5 GRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
> ath:AT2G33370 60S ribosomal protein L23 (RPL23B)
Length=140
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGG GNK +++LGLPV A +NC DN+GAKNLYII+VKG LNRLPS+ +GD+
Sbjct 5 GRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
> xla:444350 rpl23, MGC82808; ribosomal protein L23; K02894 large
subunit ribosomal protein L23e
Length=140
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGG+ G K +++LGLPVGA+INC DN+G KNLYII+VKG LNRLP++ +GD+
Sbjct 5 GRGGSSGAKFRISLGLPVGAVINCADNTGGKNLYIISVKGIKGRLNRLPAAGVGDM 60
> cel:B0336.10 rpl-23; Ribosomal Protein, Large subunit family
member (rpl-23); K02894 large subunit ribosomal protein L23e
Length=140
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 46/56 (82%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
GRGGA G K +++LGLPVGA++NC DN+GAKNL++I+V G LNRLPS+ +GD+
Sbjct 5 GRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDM 60
> mmu:100039086 Gm15032, OTTMUSG00000018816; predicted gene 15032
Length=161
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 0/56 (0%)
Query 26 GRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDL 81
G+ G+ K +++LGLPV A+INC DN+G KNL+II+VKG LNRLP++ +GD+
Sbjct 26 GQDGSSRAKFRISLGLPVRAVINCADNTGTKNLHIISVKGIKVRLNRLPAAGVGDM 81
Lambda K H
0.323 0.142 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2053886800
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40