bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_8005_orf1
Length=123
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_101390 ribosome biogenesis protein BOP1, putative (... 70.5 1e-12
ath:AT2G40360 transducin family protein / WD-40 repeat family ... 57.8 8e-09
cpv:cgd2_3680 eukaryotic ribosome biogenesis; Erb1p ; K14824 r... 46.6 2e-05
sce:YMR049C ERB1; Constituent of 66S pre-ribosomal particles, ... 46.2 3e-05
xla:380050 bop1, MGC52658, bop1-B; block of proliferation 1; K... 43.9 1e-04
xla:379542 bop1-a, MGC68939; ribosome biogenesis protein bop1-... 41.2 9e-04
xla:397870 wdhd1, MGC130701, and1, ctf4; WD repeat and HMG-box... 40.0 0.002
bbo:BBOV_IV005890 23.m06099; coatomer beta subunit 40.0 0.002
mmu:12181 Bop1, AU020183, AW146150, D18861, Erb1p, Kiaa0124, m... 39.3 0.003
cel:K07C5.8 cash-1; CKA And Striatin Homolog family member (ca... 38.5 0.005
tgo:TGME49_043540 U4/U6 small nuclear ribonucleoprotein, putat... 38.1 0.006
hsa:23246 BOP1, KIAA0124; block of proliferation 1; K14824 rib... 38.1 0.007
tpv:TP01_0394 coatomer beta subunit 38.1 0.007
bbo:BBOV_IV007470 23.m06558; hypothetical protein 37.0 0.016
ath:AT5G56130 transducin family protein / WD-40 repeat family ... 36.6 0.017
tgo:TGME49_111620 WD repeat domain-containing protein (EC:2.7.... 36.6 0.020
xla:446818 strn3, MGC80575, strn; striatin, calmodulin binding... 36.2 0.024
dre:406571 cirh1a, wu:fi09g10, wu:fi37c02, zgc:77199; cirrhosi... 36.2 0.027
tpv:TP01_0483 hypothetical protein; K12662 U4/U6 small nuclear... 36.2 0.028
mmu:94186 Strn3, Gs2na, SG2NA; striatin, calmodulin binding pr... 35.8 0.030
dre:562780 strn4; striatin, calmodulin binding protein 4 35.8
bbo:BBOV_IV005130 23.m06465; ribosomal processing protein; K11... 35.8 0.037
xla:734230 fbxw7; F-box and WD repeat domain containing 7; K10... 35.4 0.041
dre:564991 fbxw7, si:ch211-208n2.1; F-box and WD repeat domain... 35.4 0.043
mmu:50754 Fbxw7, 1110001A17Rik, AGO, Cdc4, Fbw7, Fbwd6, Fbx30,... 35.4 0.045
ath:AT4G21520 transducin family protein / WD-40 repeat family ... 35.4 0.047
hsa:55294 FBXW7, AGO, CDC4, DKFZp686F23254, FBW6, FBW7, FBX30,... 35.0 0.052
ath:AT4G04940 transducin family protein / WD-40 repeat family ... 35.0 0.057
cel:Y48B6A.1 hypothetical protein; K14824 ribosome biogenesis ... 35.0 0.060
tgo:TGME49_118260 hypothetical protein 34.7 0.066
cel:C10H11.8 hypothetical protein; K08266 G protein beta subun... 34.7 0.067
ath:AT1G29320 transducin family protein / WD-40 repeat family ... 34.3 0.11
mmu:268980 Strn, AU022939, D130055P19; striatin, calmodulin bi... 34.3 0.11
dre:445302 thoc3, zgc:100815; THO complex 3; K12880 THO comple... 33.9 0.12
xla:100127264 wdsub1, ubox6, wdsam1; WD repeat, sterile alpha ... 33.9 0.12
hsa:6801 STRN, MGC125642, SG2NA; striatin, calmodulin binding ... 33.9 0.12
dre:563124 strn3, GS2NA, KIAA1333, MGC175239, id:ibd1241, si:b... 33.9 0.14
mmu:73666 Thoc3, 2410044K02Rik, AL033344; THO complex 3; K1288... 33.5 0.17
hsa:84321 THOC3, MGC5469, TEX1; THO complex 3; K12880 THO comp... 33.5 0.18
ath:AT1G18080 ATARCA; ATARCA; nucleotide binding; K14753 guani... 33.1 0.21
cel:C33H5.7 hypothetical protein; K14962 COMPASS component SWD2 32.7 0.28
hsa:55054 ATG16L1, APG16L, ATG16A, ATG16L, FLJ00045, FLJ10035,... 32.7 0.28
xla:445854 wdr46-b, Bing4, bing4-b; WD repeat domain 46 32.7
mmu:77040 Atg16l1, 1500009K01Rik, Apg16l, Atg16l, WDR30; autop... 32.7 0.32
ath:AT1G61210 WD-40 repeat family protein / katanin p80 subuni... 32.3 0.38
cpv:cgd2_1870 guanine nucleotide-binding protein ; K14753 guan... 32.0 0.43
ath:AT3G45620 transducin family protein / WD-40 repeat family ... 32.0 0.43
hsa:29966 STRN3, SG2NA; striatin, calmodulin binding protein 3 32.0
tgo:TGME49_068350 hypothetical protein 32.0 0.47
dre:324855 plaa, cb623, wu:fc45d08, wu:fi33e06, zgc:56568, zgc... 32.0 0.52
> tgo:TGME49_101390 ribosome biogenesis protein BOP1, putative
(EC:2.7.11.7); K14824 ribosome biogenesis protein ERB1
Length=1035
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 0/108 (0%)
Query 12 DAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHPRLPILAAAAAEQLLLFV 71
D G +VA G +D LRV E+ TG+ + LQQ +TA AFHPRLP+LAAA +QLLL V
Sbjct 574 DYTGQWVAVGGADQTLRVVELLTGKQFLSFRLQQPVTALAFHPRLPLLAAAIEDQLLLLV 633
Query 72 LDQPAFDDSSLQQLEAAAAADAAAPAAAKKKKKAAAAAAAADSQAAAE 119
LD P FD ++ QL A+ A AKK + + A A+S+ A+
Sbjct 634 LDLPLFDQTTASQLTQASERGEAKAGEAKKHRACGSEGADAESEHPAQ 681
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQ--ITAAAFHPRLPILAAA 62
A+ + +G + AG+ + L +F+++ ++ + IT A HP P++ A
Sbjct 910 AISSIDVHPSGEQIIAGAENRRLYIFDLELSSRVYKIMRSHKGAITCACLHPSFPLMCTA 969
Query 63 AAE 65
+A+
Sbjct 970 SAD 972
> ath:AT2G40360 transducin family protein / WD-40 repeat family
protein; K14824 ribosome biogenesis protein ERB1
Length=753
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query 4 AAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHP--RLPILAA 61
AV ++ D++G ++A+GS+DG +R++EV+TGR + I A++P RLP+LA
Sbjct 424 GAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNPLSRLPVLAV 483
Query 62 AAAEQLLLF 70
A L
Sbjct 484 AMGRDLFFL 492
> cpv:cgd2_3680 eukaryotic ribosome biogenesis; Erb1p ; K14824
ribosome biogenesis protein ERB1
Length=669
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 31/124 (25%)
Query 9 VAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAV----LLQQ------------------- 45
++A + G ++A G + L VFE+ T RIA + L QQ
Sbjct 265 MSASSDGFWLAVGVGN-LLTVFEISTSRIAFKLDISKLAQQVNIYDEPSSSDETQESNTN 323
Query 46 QITAAAFHPRLPILAAAAAEQLLLFVLDQPAF---DDSS----LQQLEAAAAADAAAPAA 98
IT AFHP LPILA E L + VL P+ +DS ++Q E + + + +
Sbjct 324 SITTLAFHPNLPILACGVEEYLFILVLKLPSICFAEDSEASTDIEQEETSDSDEIIKNSK 383
Query 99 AKKK 102
K+K
Sbjct 384 NKEK 387
> sce:YMR049C ERB1; Constituent of 66S pre-ribosomal particles,
forms a complex with Nop7p and Ytm1p that is required for
maturation of the large ribosomal subunit; required for maturation
of the 25S and 5.8S ribosomal RNAs; homologous to mammalian
Bop1; K14824 ribosome biogenesis protein ERB1
Length=807
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query 4 AAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGR-IAAAVLLQQQ------ITAAAFHP-- 54
VR ++ D +G+++A GS DG +RV+E+ TGR + L+ + I ++P
Sbjct 438 GKVRTLSIDPSGLWLATGSDDGTVRVWEILTGREVYRTTLIDDEENPDYHIECIEWNPDA 497
Query 55 RLPILAAAAAEQLLLFV 71
ILA A E + L V
Sbjct 498 NNGILAVAVGENIHLIV 514
> xla:380050 bop1, MGC52658, bop1-B; block of proliferation 1;
K14824 ribosome biogenesis protein ERB1
Length=728
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query 6 VRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHPRLPILAAAAA 64
VR ++ +G ++ +GS D +R +EV TGR +V+L+ + + +++P P+L AA
Sbjct 398 VRCISVSPSGQWLVSGSDDCSVRFWEVSTGRCMKSVVLEGAVKSISWNPN-PVLVLVAA 455
> xla:379542 bop1-a, MGC68939; ribosome biogenesis protein bop1-A;
K14824 ribosome biogenesis protein ERB1
Length=728
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 0/49 (0%)
Query 6 VRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHP 54
VR ++ +G ++ +GS D +R +EV TGR +V+L+ + + +++P
Sbjct 398 VRCISVSPSGQWLVSGSDDCSVRFWEVSTGRCMKSVVLEGAVKSISWNP 446
> xla:397870 wdhd1, MGC130701, and1, ctf4; WD repeat and HMG-box
DNA binding protein 1; K11274 chromosome transmission fidelity
protein 4
Length=1127
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query 6 VRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQ--QITAAAFHPRLPILAAAA 63
V +VA G Y+ AGS DGC+ + + T + ++ I A A+HP LP +A
Sbjct 233 VNIVAWSPCGQYLVAGSVDGCIVAWNIATKACLERIKHEKGYTICALAWHPHLPQIAYTD 292
Query 64 AEQLLLFVLD 73
E L + D
Sbjct 293 NEGNLGLLED 302
> bbo:BBOV_IV005890 23.m06099; coatomer beta subunit
Length=873
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query 17 YVAAGSSDGCLRVFEVKTGRIAAAVLLQ--QQITAAAFHPRLPILAAAAAE 65
Y+ +GS D +RV++ +T ++ VL Q Q +T HPRLP++ A +
Sbjct 213 YIISGSEDTTIRVWDYQT-KLCLQVLRQHTQPVTCVLHHPRLPLIITAGED 262
> mmu:12181 Bop1, AU020183, AW146150, D18861, Erb1p, Kiaa0124,
mKIAA0124; block of proliferation 1; K14824 ribosome biogenesis
protein ERB1
Length=732
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query 6 VRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHPRLPI-LAAAAA 64
VR ++ G ++A+GS DG L+++EV T R V + + + A++P I L AAA
Sbjct 402 VRCLSVSPGGQWLASGSDDGTLKLWEVATARCMKTVHVGGVVRSIAWNPNPTICLVAAAM 461
Query 65 EQLLLFVLDQPAFDD-----SSLQQLEAAAAADAAA 95
+ +L + PA D S+ Q LEA + A
Sbjct 462 DDAVLLL--NPALGDRLLVGSTDQLLEAFTPPEEPA 495
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query 1 PAGAAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQ--ITAAAFHPRLPI 58
P V +A AG + GS D L F++ VL + + A AFHPR P+
Sbjct 604 PNCKWVSSMAVHPAGDNIICGSYDSKLVWFDLDLSTKPYKVLRHHKKALRAVAFHPRYPL 663
Query 59 LAAAAAE 65
A+ + +
Sbjct 664 FASGSDD 670
> cel:K07C5.8 cash-1; CKA And Striatin Homolog family member (cash-1)
Length=678
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQ-----ITAAAFHPRLPIL 59
V +A D G+Y+ +GS DG +R++ ++ + ++ +T+ AFHP ++
Sbjct 602 GVSSLAIDPNGLYLLSGSHDGSIRMWNMEKRSCLQEISAHRKKNDSAVTSVAFHPSRSLI 661
Query 60 AAAAAEQL 67
+A A+ L
Sbjct 662 GSAGADSL 669
> tgo:TGME49_043540 U4/U6 small nuclear ribonucleoprotein, putative
(EC:2.6.1.45); K12662 U4/U6 small nuclear ribonucleoprotein
PRP4
Length=711
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query 4 AAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQ-QQITAAAFHPRLPILAAA 62
AAV V+ G +A G +RV++++TGR ++ +Q+ +AAFHP L L A
Sbjct 503 AAVYGVSIHPDGSLIATTDLSGVVRVWDLRTGRTVMPLVGHVKQVVSAAFHPILGNLVAT 562
Query 63 AAEQLLLFVLD 73
A++ + + D
Sbjct 563 ASDDHSVKIWD 573
> hsa:23246 BOP1, KIAA0124; block of proliferation 1; K14824 ribosome
biogenesis protein ERB1
Length=746
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query 6 VRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHPRLPI-LAAAAA 64
VR ++ G ++ +GS DG LR++EV T R V + + + A++P + L AAA
Sbjct 416 VRCLSVSPGGQWLVSGSDDGSLRLWEVATARCVRTVPVGGVVKSVAWNPSPAVCLVAAAV 475
Query 65 EQLLLFVLDQPAFDD 79
E +L + PA D
Sbjct 476 EDSVLLL--NPALGD 488
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query 1 PAGAAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQ--ITAAAFHPRLPI 58
P V +A AG V GS D L F++ +L + + A AFHPR P+
Sbjct 618 PNCKWVSSLAVHPAGDNVICGSYDSKLVWFDLDLSTKPYRMLRHHKKALRAVAFHPRYPL 677
Query 59 LAAAAAE 65
A+ + +
Sbjct 678 FASGSDD 684
> tpv:TP01_0394 coatomer beta subunit
Length=911
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query 17 YVAAGSSDGCLRVFEVKTGRIAAAVLLQQ--QITAAAFHPRLPILAAAAAE 65
Y+ +GS D +RV++ +T ++ VL + ++ +HPRLPI+ + +
Sbjct 247 YIISGSDDCTIRVWDYQT-KLCLQVLKKHFKPVSCVVYHPRLPIILSTGED 296
> bbo:BBOV_IV007470 23.m06558; hypothetical protein
Length=362
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 13/61 (21%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query 9 VAADAAGVYVAAGSSDGCLRVFEVKTGR-IAAAVLLQQQITAAAFHPRLPILAAAAAEQL 67
+ D + +G+ DG L ++ KTG + + +++A++HP+LP++ + ++
Sbjct 278 ITFDVRNDQIVSGTDDGNLVIYNGKTGNALTKTKICDTVVSSASYHPKLPVIVTSRGTRV 337
Query 68 L 68
Sbjct 338 Y 338
> ath:AT5G56130 transducin family protein / WD-40 repeat family
protein; K12880 THO complex subunit 3
Length=315
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 0/72 (0%)
Query 6 VRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHPRLPILAAAAAE 65
VR ++ + +G Y+A+ S D + + V+TGR + + + + ++P+ +LA A +
Sbjct 236 VRTISFNYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDD 295
Query 66 QLLLFVLDQPAF 77
+ + D+ F
Sbjct 296 KNPKYNTDEGVF 307
> tgo:TGME49_111620 WD repeat domain-containing protein (EC:2.7.11.7)
Length=3704
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query 4 AAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQ-QITAAAFHPRLPIL--A 60
AAV VV DA G + G DG ++ ++ TG++ A++ Q IT HP +L
Sbjct 494 AAVYVVRYDATGSVIFTGGDDGLVKAWDAATGQLVYALIKHQGDITDIDLHPNNSLLLSG 553
Query 61 AAAAEQLLLFVL 72
E L VL
Sbjct 554 CGKGEVRLWRVL 565
> xla:446818 strn3, MGC80575, strn; striatin, calmodulin binding
protein 3
Length=741
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVL-----LQQQITAAAFHPRLPIL 59
AV +A D G+Y+ +GS D +R++ + + + L + I AFHP +
Sbjct 669 AVTSLAVDPNGIYLMSGSHDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHPTKAFI 728
Query 60 AAAAAEQL 67
A+A A+ L
Sbjct 729 ASAGADAL 736
> dre:406571 cirh1a, wu:fi09g10, wu:fi37c02, zgc:77199; cirrhosis,
autosomal recessive 1A (cirhin); K14548 U3 small nucleolar
RNA-associated protein 4
Length=685
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query 3 GAAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQ---ITAAAFHPRLPIL 59
G + + + G ++A G DG +++FEV +I L +Q I + ++HP +
Sbjct 100 GGPIWAITGNQQGTHLAVGCEDGTVKLFEVTEDKIQFERNLDRQKGRIISLSWHPSGSKI 159
Query 60 AAAAAEQLLLF 70
AA + + +F
Sbjct 160 AAGMMDMIQVF 170
> tpv:TP01_0483 hypothetical protein; K12662 U4/U6 small nuclear
ribonucleoprotein PRP4
Length=528
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGR-IAAAVLLQQQITAAAFHPRL-PILAAA 62
+V +A + G +A+G G L +F+++TG+ I + IT FHP L I A +
Sbjct 358 SVYGLAINGDGNLIASGDQHGVLLIFDLRTGKHIFQQCIHNADITGINFHPLLSHIFATS 417
Query 63 AAEQ 66
+++
Sbjct 418 SSDN 421
> mmu:94186 Strn3, Gs2na, SG2NA; striatin, calmodulin binding
protein 3
Length=712
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVL-----LQQQITAAAFHPRLPIL 59
AV +A D G+Y+ +GS D +R++ + + + L + I AFHP +
Sbjct 640 AVTSLAVDPNGIYLMSGSHDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHPSKAYI 699
Query 60 AAAAAEQL 67
A+A A+ L
Sbjct 700 ASAGADAL 707
> dre:562780 strn4; striatin, calmodulin binding protein 4
Length=765
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQ-----ITAAAFHPRLPIL 59
AV +A D G Y+ +GS D +R++ + + ++ I AFHP P +
Sbjct 693 AVTCLATDPKGTYLISGSHDCSVRLWMLDNRTCVQEITAHRKKHDEAIHDVAFHPSQPFI 752
Query 60 AAAAAEQL-LLFV 71
A+A A+ L +FV
Sbjct 753 ASAGADALAKIFV 765
> bbo:BBOV_IV005130 23.m06465; ribosomal processing protein; K11806
WD repeat and SOF domain-containing protein 1
Length=468
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHPRLPILAAAAA 64
VR +D ++AA ++D + +++++ V+LQQ+ A A++P+ P+ AA
Sbjct 227 CVRFNPSDVN--FIAASAADNSVGLYDIRANSPLRKVVLQQRTNAIAWNPQNPLHFTAAN 284
Query 65 EQLLLFVLD 73
E L+ D
Sbjct 285 EDSNLYTFD 293
> xla:734230 fbxw7; F-box and WD repeat domain containing 7; K10260
F-box and WD-40 domain protein 7
Length=706
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 0/48 (0%)
Query 3 GAAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAA 50
G RV + G++V +GS D +RV++V+TG + Q +T+
Sbjct 538 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 585
> dre:564991 fbxw7, si:ch211-208n2.1; F-box and WD repeat domain
containing 7; K10260 F-box and WD-40 domain protein 7
Length=605
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 0/48 (0%)
Query 3 GAAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAA 50
G RV + G++V +GS D +RV++V+TG + Q +T+
Sbjct 437 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 484
> mmu:50754 Fbxw7, 1110001A17Rik, AGO, Cdc4, Fbw7, Fbwd6, Fbx30,
Fbxo30, Fbxw6, SEL-10; F-box and WD-40 domain protein 7;
K10260 F-box and WD-40 domain protein 7
Length=710
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 0/48 (0%)
Query 3 GAAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAA 50
G RV + G++V +GS D +RV++V+TG + Q +T+
Sbjct 542 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 589
> ath:AT4G21520 transducin family protein / WD-40 repeat family
protein
Length=425
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query 14 AGVYVAAGSSDGCLRVFEVKTGRIAAAVLL-QQQITAAAFHPRLPILAAAAAEQLLLFVL 72
G ++ G DG + +++++TG + + A +FHP LP+ A ++ +
Sbjct 313 CGRHLGTGGQDGLVHMYDLQTGNWVSGYQAASDTVNAFSFHPYLPMAATSSGHRRFAIPD 372
Query 73 DQPAFDDSSLQ 83
D D + LQ
Sbjct 373 DDDGEDKNELQ 383
> hsa:55294 FBXW7, AGO, CDC4, DKFZp686F23254, FBW6, FBW7, FBX30,
FBXO30, FBXW6, FLJ16457, SEL-10, SEL10; F-box and WD repeat
domain containing 7; K10260 F-box and WD-40 domain protein
7
Length=589
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 0/48 (0%)
Query 3 GAAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAA 50
G RV + G++V +GS D +RV++V+TG + Q +T+
Sbjct 421 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 468
> ath:AT4G04940 transducin family protein / WD-40 repeat family
protein; K14554 U3 small nucleolar RNA-associated protein
21
Length=910
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query 15 GVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHPRLPILAAAAAEQ--LLLFVL 72
G +V + S DG LR+++V + V + ITA + P + +LA A ++Q + L+V
Sbjct 569 GKWVISSSMDGSLRIWDVILAKQIDGVHVDVPITALSLSPNMDVLATAHSDQNGVYLWV- 627
Query 73 DQPAFDDSSLQQLEAAAAA 91
+Q F S L +E+ A+
Sbjct 628 NQSMF--SGLPSVESYASG 644
> cel:Y48B6A.1 hypothetical protein; K14824 ribosome biogenesis
protein ERB1
Length=674
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query 6 VRVVAADAA-GVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHP---RLPILAA 61
VR + + G +A+G DG +R++ + TGR + ++T+ +F P R L A
Sbjct 347 VRAITVEPERGELLASGGEDGTVRIWMIATGRCIKTFQMDGEVTSVSFSPVADR--TLLA 404
Query 62 AAAEQLLLFVLDQPAFDDSSLQQLEAAAA 90
A E + +L+ D +QQ EA A
Sbjct 405 VAYEGKYVAILNTGCGDRLHVQQTEALLA 433
> tgo:TGME49_118260 hypothetical protein
Length=959
Score = 34.7 bits (78), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query 4 AAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQ-----QITAAAFHPRLPI 58
AAV + G Y A+GSSD C R++ T R LLQ + AFHP +
Sbjct 627 AAVWALDVGPYGHYFASGSSDNCARLW--CTSRSFPLRLLQHPAAATDVFHVAFHPNSSL 684
Query 59 LAAAAAEQLL-LFVL 72
L AA++ + LF L
Sbjct 685 LLTAASDNCVRLFDL 699
> cel:C10H11.8 hypothetical protein; K08266 G protein beta subunit-like
Length=382
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 0/38 (0%)
Query 6 VRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLL 43
V VV +AAG ++ G DG R++E++ ++ A LL
Sbjct 125 VTVVGFEAAGRWMYTGGDDGVCRIWEMRNNQLVANRLL 162
> ath:AT1G29320 transducin family protein / WD-40 repeat family
protein; K14841 ribosome biogenesis protein NSA1
Length=468
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 0/49 (0%)
Query 4 AAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAF 52
++R V +A+ D LRV++VKT ++ +AV L+Q +T F
Sbjct 303 GSIRSVVRHPQHQVIASCGLDRYLRVYDVKTRQLISAVFLKQHLTGLVF 351
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query 4 AAVRVVAADAAG--VYVAAGSSDGCLRVFEVKTGRIAAAVL--LQQQITAAAFHPRLPIL 59
A+ +A D G +YV S+D L F+++TG++ + L I + HP+ ++
Sbjct 260 TAITSIAEDPDGHTIYVGNASAD--LASFDIRTGKLLGSFLGKCSGSIRSVVRHPQHQVI 317
Query 60 AAAAAEQLL 68
A+ ++ L
Sbjct 318 ASCGLDRYL 326
> mmu:268980 Strn, AU022939, D130055P19; striatin, calmodulin
binding protein
Length=780
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGR-----IAAAVLLQQQITAAAFHPRLPIL 59
AV +A D G+Y+ +GS D +R++ +++ A ++ I AFHP +
Sbjct 708 AVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYI 767
Query 60 AAAAAEQL 67
A+A A+ L
Sbjct 768 ASAGADAL 775
> dre:445302 thoc3, zgc:100815; THO complex 3; K12880 THO complex
subunit 3
Length=322
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 0/61 (0%)
Query 6 VRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHPRLPILAAAAAE 65
VR ++ G +A+ S D + + EV+TG + + A+HP+ P+LA A +
Sbjct 240 VRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEIQCESPTFTVAWHPKRPLLAYACDD 299
Query 66 Q 66
+
Sbjct 300 K 300
> xla:100127264 wdsub1, ubox6, wdsam1; WD repeat, sterile alpha
motif and U-box domain containing 1
Length=460
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query 1 PAGAAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIA-AAVLLQQQITAAAFHPRLPIL 59
P+G+ VRV + Y+A G +DG + ++ V+ + +A + I A AF P +L
Sbjct 95 PSGSPVRVCRYSSNSNYLATGGADGSIVLWNVQQMKFYRSATVKDGSIVACAFSPHGNLL 154
Query 60 AAAAAEQLLLFVLDQPAFDDS 80
++ D A+DDS
Sbjct 155 ITGSS------CGDLTAWDDS 169
> hsa:6801 STRN, MGC125642, SG2NA; striatin, calmodulin binding
protein
Length=780
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGR-----IAAAVLLQQQITAAAFHPRLPIL 59
AV +A D G+Y+ +GS D +R++ +++ A ++ I AFHP +
Sbjct 708 AVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYI 767
Query 60 AAAAAEQL 67
A+A A+ L
Sbjct 768 ASAGADAL 775
> dre:563124 strn3, GS2NA, KIAA1333, MGC175239, id:ibd1241, si:busm1-115o7.2,
si:dz115o7.2, si:dz234g15.7, wu:fc02f06; striatin,
calmodulin binding protein 3
Length=700
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQ-----ITAAAFHPRLPIL 59
AV +A D G+Y+ +GS D +R++ + + V ++ I AFHP +
Sbjct 628 AVTSLAIDPNGIYLMSGSHDSSIRLWNLDSKTCVQEVTAHRKKSDEAIYDVAFHPSKAYI 687
Query 60 AAAAAEQL 67
+A A+ L
Sbjct 688 GSAGADAL 695
> mmu:73666 Thoc3, 2410044K02Rik, AL033344; THO complex 3; K12880
THO complex subunit 3
Length=351
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 0/61 (0%)
Query 6 VRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHPRLPILAAAAAE 65
VR ++ G +A+ S D + + EV+TG V + A+HP+ P+LA A +
Sbjct 269 VRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDD 328
Query 66 Q 66
+
Sbjct 329 K 329
> hsa:84321 THOC3, MGC5469, TEX1; THO complex 3; K12880 THO complex
subunit 3
Length=351
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 0/61 (0%)
Query 6 VRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHPRLPILAAAAAE 65
VR ++ G +A+ S D + + EV+TG V + A+HP+ P+LA A +
Sbjct 269 VRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDD 328
Query 66 Q 66
+
Sbjct 329 K 329
> ath:AT1G18080 ATARCA; ATARCA; nucleotide binding; K14753 guanine
nucleotide-binding protein subunit beta-2-like 1 protein
Length=327
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query 6 VRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQITAAAFHPRLPILAAAAAE 65
V VA G A+G DG + ++++ G+ ++ I A F P L AA
Sbjct 197 VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEH 256
Query 66 QLLLFVLDQPAFDDSSLQQLEA-AAAADAAAPAAAKKK 102
+ ++ L+ + + L+A A AD + PAA K+K
Sbjct 257 GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRK 294
> cel:C33H5.7 hypothetical protein; K14962 COMPASS component SWD2
Length=326
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query 17 YVAAGSSDGCLRVFEVKTGRIAAAVL--LQQQITAAAFHPRLPILAAAAAEQLLLF 70
++ GSSDG + ++V+TG IA L Q A F P+ +AA A +L L+
Sbjct 259 HIMVGSSDGYIYFYDVETGEIALKTLAPNNQTCHIAEFSPQ-HFVAATADTKLTLW 313
> hsa:55054 ATG16L1, APG16L, ATG16A, ATG16L, FLJ00045, FLJ10035,
FLJ10828, FLJ22677, IBD10, WDR30; ATG16 autophagy related
16-like 1 (S. cerevisiae)
Length=523
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query 15 GVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQ---ITAAAFHP 54
G YVAAGS++G L ++ V TG++ VL +Q I A A+ P
Sbjct 462 GSYVAAGSAEGSLYIWSVLTGKV-EKVLSKQHSSSINAVAWSP 503
> xla:445854 wdr46-b, Bing4, bing4-b; WD repeat domain 46
Length=586
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 0/40 (0%)
Query 4 AAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVLL 43
AVR ++ D G+Y+A+ D L +F+++T R + LL
Sbjct 336 GAVRALSVDKTGMYMASSGLDRKLTIFDLRTYRPLTSCLL 375
> mmu:77040 Atg16l1, 1500009K01Rik, Apg16l, Atg16l, WDR30; autophagy-related
16-like 1 (yeast)
Length=623
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query 15 GVYVAAGSSDGCLRVFEVKTGRIAAAVLLQQQ---ITAAAFHP 54
G YVAAGS++G L V+ V TG++ VL +Q I A A+ P
Sbjct 562 GSYVAAGSAEGSLYVWSVLTGKV-EKVLSKQHSSSINAVAWAP 603
> ath:AT1G61210 WD-40 repeat family protein / katanin p80 subunit,
putative
Length=1180
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query 4 AAVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVL-LQQQITAAAFHPRLPILAAA 62
+AV VA D+A V V AG+S G +++++V+ ++ A + +A FHP LA+
Sbjct 59 SAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASG 118
Query 63 AAE 65
+++
Sbjct 119 SSD 121
> cpv:cgd2_1870 guanine nucleotide-binding protein ; K14753 guanine
nucleotide-binding protein subunit beta-2-like 1 protein
Length=313
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 0/32 (0%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGR 36
AV VA + G YV +GS D LR+F+V G+
Sbjct 68 AVNDVAVSSDGSYVVSGSCDKTLRLFDVNAGK 99
> ath:AT3G45620 transducin family protein / WD-40 repeat family
protein
Length=481
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query 17 YVAAGSSDGCLRVFEVKTGRIAAAVLLQQQ-ITAAAFHPRLPILAAAAAEQ 66
YV +GS G + +++ K G++ A++ ++ + HP +P+LA+ E+
Sbjct 335 YVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIPLLASCGIEK 385
> hsa:29966 STRN3, SG2NA; striatin, calmodulin binding protein
3
Length=797
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query 5 AVRVVAADAAGVYVAAGSSDGCLRVFEVKTGRIAAAVL-----LQQQITAAAFHPRLPIL 59
AV +A D G+Y+ +GS D +R++ + + + L + I AFH +
Sbjct 725 AVTSLAVDPNGIYLMSGSHDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHSSKAYI 784
Query 60 AAAAAEQL 67
A+A A+ L
Sbjct 785 ASAGADAL 792
> tgo:TGME49_068350 hypothetical protein
Length=515
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 0/27 (0%)
Query 15 GVYVAAGSSDGCLRVFEVKTGRIAAAV 41
G VA G+SDG +R+FE K+GR ++
Sbjct 437 GALVAVGASDGGVRLFETKSGRFLGSL 463
> dre:324855 plaa, cb623, wu:fc45d08, wu:fi33e06, zgc:56568, zgc:66193;
phospholipase A2-activating protein; K14018 phospholipase
A-2-activating protein
Length=798
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query 18 VAAGSSDGCLRVFEVKTGRIAAAVLLQ---QQITAAAFHPRLPILAAAAAEQLL-LFVLD 73
+A G+SDG +RVF R+A+A LQ +++ A P+ L E+L LD
Sbjct 285 IAVGASDGIIRVFTESEDRVASAQDLQAFEDELSKAVIDPKTGDLGDIKIEELPGREHLD 344
Query 74 QPAFDDSSLQQLEAAAAADAAAPAAAKKKKKAAAAAAAADSQAAAE 119
+P D + ++ + +A + + + SQ +++
Sbjct 345 EPGNRDGQTRLIKEGSNVEAYQWSMSDGRWMKIGDVVGGSSQQSSK 390
Lambda K H
0.315 0.121 0.316
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2003197800
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40