bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_8119_orf2 Length=97 Score E Sequences producing significant alignments: (Bits) Value ath:AT3G46100 ATHRS1; ATHRS1 (HISTIDYL-TRNA SYNTHETASE 1); his... 68.6 5e-12 tpv:TP02_0435 histidyl-tRNA synthetase; K01892 histidyl-tRNA s... 65.9 3e-11 ath:AT5G03406 ATP binding / aminoacyl-tRNA ligase/ histidine-t... 64.3 8e-11 bbo:BBOV_III005180 17.m07463; hypothetical protein; K01892 his... 48.5 6e-06 tgo:TGME49_095050 histidyl-tRNA synthetase, putative (EC:6.1.1... 45.8 3e-05 pfa:PFI1645c histidyl-tRNA synthetase, putative; K01892 histid... 35.8 0.036 mmu:70791 Hars2, 4631412B19Rik, AI593507, HARSR, HO3, Harsl; h... 35.0 0.055 ath:AT3G02760 ATP binding / aminoacyl-tRNA ligase/ histidine-t... 33.5 0.19 eco:b2514 hisS, ECK2510, JW2498; histidyl tRNA synthetase (EC:... 33.1 0.25 > ath:AT3G46100 ATHRS1; ATHRS1 (HISTIDYL-TRNA SYNTHETASE 1); histidine-tRNA ligase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Length=486 Score = 68.6 bits (166), Expect = 5e-12, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 2/70 (2%) Query 1 HIYRLHVSGPDPLCLRPEITPSLARMLQREQQQQPSGIARRWYSIERVWRHERPGCGRRR 60 +Y G + LRPE+TPSLAR++ Q+ + + +W++I + WR+ER GRRR Sbjct 127 QLYCFEDRGNRRVALRPELTPSLARLVI--QKGKSVSLPLKWFAIGQCWRYERMTRGRRR 184 Query 61 EHFQWNLDII 70 EH+QWN+DII Sbjct 185 EHYQWNMDII 194 > tpv:TP02_0435 histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Length=508 Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats. Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Query 13 LCLRPEITPSLARMLQR--EQQQQPSGIARRWYSIERVWRHERPGCGRRREHFQWNLDII 70 L LR +ITP ML ++ PS +WY+I WR+ERPG GRRR H QWN DI+ Sbjct 120 LSLRGDITPQFMNMLTSYYSNKRVPSHNILKWYTIADCWRYERPGLGRRRNHLQWNADIV 179 > ath:AT5G03406 ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding Length=263 Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 2/70 (2%) Query 1 HIYRLHVSGPDPLCLRPEITPSLARMLQREQQQQPSGIARRWYSIERVWRHERPGCGRRR 60 +Y G + LRPE+TPSLAR++ Q+ + + +W+++ + WR+ER GRRR Sbjct 127 QLYCFEDRGNRRVALRPELTPSLARLVI--QKGKSVSLPLKWFAVGQCWRYERMTRGRRR 184 Query 61 EHFQWNLDII 70 EH+QWN+DII Sbjct 185 EHYQWNMDII 194 > bbo:BBOV_III005180 17.m07463; hypothetical protein; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Length=548 Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 21/85 (24%) Query 13 LCLRPEITPSLARMLQREQQQQP---------SGIARRWYSIERVWRHERPGCGRRREHF 63 L LR ++TP ML +E + P + +W+++ WR+ERPG RRR H Sbjct 163 LALRGDVTPQFMAML-KEHWELPIKHNLNALETKQITKWFTMADCWRYERPGHCRRRNHI 221 Query 64 QWNLDIILPLFPETNPSGGIPSEAA 88 QW DI+ GIP+E A Sbjct 222 QWTCDIV-----------GIPNEDA 235 > tgo:TGME49_095050 histidyl-tRNA synthetase, putative (EC:6.1.1.21) Length=1321 Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 20/31 (64%), Positives = 24/31 (77%), Gaps = 0/31 (0%) Query 41 RWYSIERVWRHERPGCGRRREHFQWNLDIIL 71 R SI WR+ERPG RRR+H+QWNLDI+L Sbjct 404 RLTSIGDCWRYERPGRCRRRQHWQWNLDIVL 434 Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%) Query 1 HIYRLHVSGPDPLCLRPEITPSLARMLQR---EQQQQPSGIA 39 H+Y PL LRPE+TPSL R+L R + Q++ SG++ Sbjct 253 HLYLFRDQSERPLALRPELTPSLCRLLLRLYAKPQRRVSGVS 294 > pfa:PFI1645c histidyl-tRNA synthetase, putative; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Length=642 Score = 35.8 bits (81), Expect = 0.036, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 21/27 (77%), Gaps = 0/27 (0%) Query 44 SIERVWRHERPGCGRRREHFQWNLDII 70 +I + +R+E+ R+REH+QWNLDI+ Sbjct 268 TIGQCFRYEQTSRLRKREHYQWNLDIL 294 > mmu:70791 Hars2, 4631412B19Rik, AI593507, HARSR, HO3, Harsl; histidyl-tRNA synthetase 2, mitochondrial (putative) (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Length=505 Score = 35.0 bits (79), Expect = 0.055, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 10/80 (12%) Query 2 IYRLHVSGPDPLCLRPEITPSLARMLQREQQQQPSGIARRWYSIERVWRHERPGC--GRR 59 +Y L G + L LR ++T AR L + ++ + Y + +VWR E P GR Sbjct 114 MYDLKDQGGELLSLRYDLTVPFARYLAMNKLKK-----MKRYQVGKVWRRESPAIAQGRY 168 Query 60 REHFQWNLDI---ILPLFPE 76 RE Q + DI P+ P+ Sbjct 169 REFCQCDFDIAGEFDPMIPD 188 > ath:AT3G02760 ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Length=883 Score = 33.5 bits (75), Expect = 0.19, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Query 2 IYRLHVSGPDPLCLRPEITPSLARMLQREQQQQPSGIAR-RWYSIERVWRHERPGCGRRR 60 +Y + G + LR ++T AR + +GI + Y I +V+R + P GR R Sbjct 504 VYDIADQGGELCSLRYDLTVPFARYVAM------NGITSFKRYQIAKVYRRDNPSKGRYR 557 Query 61 EHFQWNLDI 69 E +Q + DI Sbjct 558 EFYQCDFDI 566 > eco:b2514 hisS, ECK2510, JW2498; histidyl tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Length=424 Score = 33.1 bits (74), Expect = 0.25, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 12/73 (16%) Query 2 IYRLHVSGPDPLCLRPEITPSLARM-----LQREQQQQPSGIARRWYSIERVWRHERPGC 56 +Y D L LRPE T R L Q+Q R WY I ++RHERP Sbjct 67 MYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQ------RLWY-IGPMFRHERPQK 119 Query 57 GRRREHFQWNLDI 69 GR R+ Q ++ Sbjct 120 GRYRQFHQLGCEV 132 Lambda K H 0.321 0.138 0.466 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2055684140 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40