bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_8231_orf1 Length=86 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_018410 60S acidic ribosomal protein P0 (EC:4.2.99.1... 119 2e-27 cpv:cgd4_2260 ribosomal protein PO like protein of the L10 fam... 109 2e-24 tpv:TP01_0294 60S acidic ribosomal protein, P0; K02941 large s... 107 7e-24 bbo:BBOV_IV004540 23.m05776; phosphoriboprotein P0; K02941 lar... 106 2e-23 pfa:PF11_0313 60S ribosomal protein P0; K02941 large subunit r... 105 3e-23 xla:379826 rplp0, MGC53408, arbp; ribosomal protein, large, P0... 97.1 1e-20 hsa:6175 RPLP0, L10E, MGC111226, MGC88175, P0, PRLP0, RPP0; ri... 93.2 2e-19 ath:AT3G11250 60S acidic ribosomal protein P0 (RPP0C); K02941 ... 92.4 3e-19 ath:AT3G09200 60S acidic ribosomal protein P0 (RPP0B); K02941 ... 92.4 3e-19 mmu:11837 Rplp0, 36B4, Arbp, MGC107165, MGC107166; ribosomal p... 92.0 4e-19 dre:58101 rplp0, arp, fb04a12, wu:fb15a08, wu:fk48c12; ribosom... 91.3 7e-19 mmu:667618 Gm8730, EG667618; predicted pseudogene 8730 90.9 ath:AT2G40010 60S acidic ribosomal protein P0 (RPP0A); K02941 ... 87.8 8e-18 sce:YLR340W RPP0, RPL10E; P0; L10E; A0; K02941 large subunit r... 86.7 2e-17 cel:F25H2.10 rpa-0; Replication Protein A homolog family membe... 84.3 8e-17 sce:YKL009W MRT4; Mrt4p; K14815 mRNA turnover protein 4 31.6 cel:F43E2.11 hypothetical protein 30.4 1.3 cel:F10E7.5 hypothetical protein; K14815 mRNA turnover protein 4 29.3 cel:F38H4.4 hypothetical protein 28.5 5.0 > tgo:TGME49_018410 60S acidic ribosomal protein P0 (EC:4.2.99.18); K02941 large subunit ribosomal protein LP0 Length=314 Score = 119 bits (298), Expect = 2e-27, Method: Composition-based stats. Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 0/82 (0%) Query 5 TQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYGL 64 T DPGST FFQALGI+TKIVKGQIEIQ V LI+ G++V+ASAATLL KL++KPF YGL Sbjct 129 TGMDPGSTSFFQALGIATKIVKGQIEIQNEVHLIKEGDKVTASAATLLQKLNIKPFEYGL 188 Query 65 KVEHVYDNGSVYSGWGLDITVE 86 ++HVYD+GSVY LDIT E Sbjct 189 AIQHVYDDGSVYKASVLDITDE 210 > cpv:cgd4_2260 ribosomal protein PO like protein of the L10 family ; K02941 large subunit ribosomal protein LP0 Length=318 Score = 109 bits (273), Expect = 2e-24, Method: Composition-based stats. Identities = 53/83 (63%), Positives = 65/83 (78%), Gaps = 0/83 (0%) Query 4 STQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYG 63 +T DP T FFQALGI+TKIVKGQ+EIQ V LI G++V+AS A LL KL++KPF+YG Sbjct 135 ATGLDPSQTSFFQALGIATKIVKGQVEIQSDVNLIDEGKKVTASQAVLLQKLNIKPFSYG 194 Query 64 LKVEHVYDNGSVYSGWGLDITVE 86 LKV ++YD+GSVYS LDIT E Sbjct 195 LKVNNIYDHGSVYSSSVLDITSE 217 > tpv:TP01_0294 60S acidic ribosomal protein, P0; K02941 large subunit ribosomal protein LP0 Length=321 Score = 107 bits (268), Expect = 7e-24, Method: Composition-based stats. Identities = 52/83 (62%), Positives = 65/83 (78%), Gaps = 0/83 (0%) Query 4 STQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYG 63 ST DP T FFQALGISTKIVKGQIEIQ V LI++ ++V+AS ATLL KL++KPF+YG Sbjct 136 STGLDPSQTSFFQALGISTKIVKGQIEIQNEVHLIKKDDKVTASGATLLQKLNIKPFSYG 195 Query 64 LKVEHVYDNGSVYSGWGLDITVE 86 LKVE +YD+G++ LD+T E Sbjct 196 LKVEKIYDSGAISDASVLDVTDE 218 > bbo:BBOV_IV004540 23.m05776; phosphoriboprotein P0; K02941 large subunit ribosomal protein LP0 Length=312 Score = 106 bits (264), Expect = 2e-23, Method: Composition-based stats. Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 0/81 (0%) Query 4 STQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYG 63 +T DP T FFQALGISTKIVKGQIEIQ V LI+ +RV+AS+ATLL KL++KPF YG Sbjct 127 ATGMDPSQTSFFQALGISTKIVKGQIEIQNDVHLIKVNDRVTASSATLLQKLNMKPFAYG 186 Query 64 LKVEHVYDNGSVYSGWGLDIT 84 LK+E YD+G + LDIT Sbjct 187 LKIEKFYDSGHLVEASALDIT 207 > pfa:PF11_0313 60S ribosomal protein P0; K02941 large subunit ribosomal protein LP0 Length=316 Score = 105 bits (263), Expect = 3e-23, Method: Composition-based stats. Identities = 51/82 (62%), Positives = 64/82 (78%), Gaps = 0/82 (0%) Query 5 TQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYGL 64 T DP T FFQ+LGISTKIVKGQIEIQ+ V LI++GE+V+AS+ATLL K ++KPF+YG+ Sbjct 128 TGMDPSHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQKFNMKPFSYGV 187 Query 65 KVEHVYDNGSVYSGWGLDITVE 86 V VYD+G +Y LDIT E Sbjct 188 DVRTVYDDGVIYDAKVLDITDE 209 > xla:379826 rplp0, MGC53408, arbp; ribosomal protein, large, P0; K02941 large subunit ribosomal protein LP0 Length=315 Score = 97.1 bits (240), Expect = 1e-20, Method: Composition-based stats. Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 0/84 (0%) Query 3 RSTQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTY 62 ++T P T FFQALGI+TKI +G IEI VQLI+ G++V AS ATLL+ L++ PF+Y Sbjct 126 QNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSY 185 Query 63 GLKVEHVYDNGSVYSGWGLDITVE 86 GL ++ VYDNGS+YS LDIT E Sbjct 186 GLIIQQVYDNGSIYSPEVLDITEE 209 > hsa:6175 RPLP0, L10E, MGC111226, MGC88175, P0, PRLP0, RPP0; ribosomal protein, large, P0; K02941 large subunit ribosomal protein LP0 Length=317 Score = 93.2 bits (230), Expect = 2e-19, Method: Composition-based stats. Identities = 45/84 (53%), Positives = 62/84 (73%), Gaps = 0/84 (0%) Query 3 RSTQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTY 62 ++T P T FFQALGI+TKI +G IEI VQLI+ G++V AS ATLL+ L++ PF++ Sbjct 126 QNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSF 185 Query 63 GLKVEHVYDNGSVYSGWGLDITVE 86 GL ++ V+DNGS+Y+ LDIT E Sbjct 186 GLVIQQVFDNGSIYNPEVLDITEE 209 > ath:AT3G11250 60S acidic ribosomal protein P0 (RPP0C); K02941 large subunit ribosomal protein LP0 Length=323 Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 44/81 (54%), Positives = 58/81 (71%), Gaps = 0/81 (0%) Query 4 STQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYG 63 +T DP T FFQ L I TKI KG +EI V+LI++G++V +S A LL KL ++PF+YG Sbjct 129 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYG 188 Query 64 LKVEHVYDNGSVYSGWGLDIT 84 L V+ VYDNGSV+S LD+T Sbjct 189 LVVQSVYDNGSVFSPEVLDLT 209 > ath:AT3G09200 60S acidic ribosomal protein P0 (RPP0B); K02941 large subunit ribosomal protein LP0 Length=287 Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 44/81 (54%), Positives = 58/81 (71%), Gaps = 0/81 (0%) Query 4 STQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYG 63 +T DP T FFQ L I TKI KG +EI V+LI++G++V +S A LL KL ++PF+YG Sbjct 96 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYG 155 Query 64 LKVEHVYDNGSVYSGWGLDIT 84 L V+ VYDNGSV+S LD+T Sbjct 156 LVVQSVYDNGSVFSPEVLDLT 176 > mmu:11837 Rplp0, 36B4, Arbp, MGC107165, MGC107166; ribosomal protein, large, P0; K02941 large subunit ribosomal protein LP0 Length=317 Score = 92.0 bits (227), Expect = 4e-19, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 61/82 (74%), Gaps = 0/82 (0%) Query 3 RSTQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTY 62 ++T P T FFQALGI+TKI +G IEI VQLI+ G++V AS ATLL+ L++ PF++ Sbjct 126 QNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSF 185 Query 63 GLKVEHVYDNGSVYSGWGLDIT 84 GL ++ V+DNGS+Y+ LDIT Sbjct 186 GLIIQQVFDNGSIYNPEVLDIT 207 > dre:58101 rplp0, arp, fb04a12, wu:fb15a08, wu:fk48c12; ribosomal protein, large, P0; K02941 large subunit ribosomal protein LP0 Length=319 Score = 91.3 bits (225), Expect = 7e-19, Method: Composition-based stats. Identities = 48/85 (56%), Positives = 61/85 (71%), Gaps = 3/85 (3%) Query 3 RSTQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATL---LHKLSVKP 59 ++T P T FFQALGI+TKI +G IEI VQLI+ G++V AS ATL L+ L++ P Sbjct 126 QNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISP 185 Query 60 FTYGLKVEHVYDNGSVYSGWGLDIT 84 F+YGL ++ VYDNGSVYS LDIT Sbjct 186 FSYGLIIQQVYDNGSVYSPEVLDIT 210 > mmu:667618 Gm8730, EG667618; predicted pseudogene 8730 Length=317 Score = 90.9 bits (224), Expect = 8e-19, Method: Composition-based stats. Identities = 44/82 (53%), Positives = 60/82 (73%), Gaps = 0/82 (0%) Query 3 RSTQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTY 62 ++T P T FFQALGI+TKI G IEI VQLI+ G++V AS ATLL+ L++ PF++ Sbjct 126 QNTGLGPEKTSFFQALGITTKISSGTIEILSDVQLIKTGDKVRASEATLLNMLNISPFSF 185 Query 63 GLKVEHVYDNGSVYSGWGLDIT 84 GL ++ V+DNGS+Y+ LDIT Sbjct 186 GLIIQQVFDNGSIYNPEVLDIT 207 > ath:AT2G40010 60S acidic ribosomal protein P0 (RPP0A); K02941 large subunit ribosomal protein LP0 Length=317 Score = 87.8 bits (216), Expect = 8e-18, Method: Composition-based stats. Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 0/81 (0%) Query 4 STQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYG 63 +T DP T FFQ L I TKI KG +EI V+LI++G++V +S A LL KL ++PF+YG Sbjct 130 NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYG 189 Query 64 LKVEHVYDNGSVYSGWGLDIT 84 L VE VYDNGSV++ L++T Sbjct 190 LVVESVYDNGSVFNPEVLNLT 210 > sce:YLR340W RPP0, RPL10E; P0; L10E; A0; K02941 large subunit ribosomal protein LP0 Length=312 Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 0/83 (0%) Query 4 STQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYG 63 +T +PG T FFQALG+ TKI +G IEI V+++ G +V S A+LL+ L++ PFT+G Sbjct 125 NTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFG 184 Query 64 LKVEHVYDNGSVYSGWGLDITVE 86 L V VYDNG V+ LDIT E Sbjct 185 LTVVQVYDNGQVFPSSILDITDE 207 > cel:F25H2.10 rpa-0; Replication Protein A homolog family member (rpa-0); K02941 large subunit ribosomal protein LP0 Length=312 Score = 84.3 bits (207), Expect = 8e-17, Method: Composition-based stats. Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 0/84 (0%) Query 3 RSTQTDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTY 62 ++T P T FFQAL I TKI +G IEI V LI+ G++V AS + LL+ L V PF+Y Sbjct 126 QNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSY 185 Query 63 GLKVEHVYDNGSVYSGWGLDITVE 86 GL V VYD+G++Y+ LD+T E Sbjct 186 GLVVRQVYDDGTLYTPEVLDMTTE 209 > sce:YKL009W MRT4; Mrt4p; K14815 mRNA turnover protein 4 Length=236 Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 0/55 (0%) Query 20 ISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYGLKVEHVYDNGS 74 I TKI G+I I + GE++ A +L + + + +KV YDN S Sbjct 171 IPTKIKAGKITIDSPYLVCTEGEKLDVRQALILKQFGIAASEFKVKVSAYYDNDS 225 > cel:F43E2.11 hypothetical protein Length=165 Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%) Query 10 GSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATL 51 GSTGFF ++ + G I QQA +IR ER A+AAT+ Sbjct 12 GSTGFF----VAHFMCAGFINQQQAEIIIRVPERPVAAAATM 49 > cel:F10E7.5 hypothetical protein; K14815 mRNA turnover protein 4 Length=220 Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 0/43 (0%) Query 16 QALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVK 58 + LG+ TK+ KG I + Q ++ + GE ++ A +L VK Sbjct 155 RKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVK 197 > cel:F38H4.4 hypothetical protein Length=501 Score = 28.5 bits (62), Expect = 5.0, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 6/64 (9%) Query 10 GSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFTYGLKVEHV 69 G+ F+ +S + +++ + ++++R G R+ A L+ F Y L EH+ Sbjct 404 GTFALFETAHLSLHSEQATLDLVKCLEMVRNG-RIHAC-----QNLTQFSFVYTLLAEHI 457 Query 70 YDNG 73 DNG Sbjct 458 LDNG 461 Lambda K H 0.317 0.133 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2030857360 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40