bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_8275_orf2
Length=85
Score E
Sequences producing significant alignments: (Bits) Value
sce:YGR109W-B Retrotransposon TYA Gag and TYB Pol genes; trans... 61.6 5e-10
sce:YIL082W-A Retrotransposon TYA Gag and TYB Pol genes; trans... 61.6 7e-10
dre:100151111 RETRotransposon-like family member (retr-1)-like 47.4 1e-05
dre:100329436 RETRotransposon-like family member (retr-1)-like 47.0 1e-05
dre:100148778 RETRotransposon-like family member (retr-1)-like 47.0 1e-05
dre:100334846 RETRotransposon-like family member (retr-1)-like 47.0 2e-05
dre:100148678 RETRotransposon-like family member (retr-1)-like 46.2 2e-05
dre:100150386 RETRotransposon-like family member (retr-1)-like 46.2 3e-05
dre:100332096 RETRotransposon-like family member (retr-1)-like 44.7 7e-05
dre:100333676 RETRotransposon-like family member (retr-1)-like 44.3 9e-05
dre:100148672 RETRotransposon-like family member (retr-1)-like 43.1 2e-04
dre:100148144 RETRotransposon-like family member (retr-1)-like 42.0 5e-04
dre:799172 RETRotransposon-like family member (retr-1)-like 40.8 0.001
dre:100333285 hypothetical protein LOC100333285 40.4 0.002
dre:100330416 hypothetical protein LOC100330416 40.4 0.002
dre:100149641 similar to guanylate binding protein 1, interfer... 36.6 0.020
dre:100005465 Gap-Pol polyprotein-like 35.4 0.044
dre:100330525 LReO_3-like 34.7 0.079
dre:100330527 RETRotransposon-like family member (retr-1)-like 34.3 0.10
dre:100331687 retrovirus polyprotein, putative-like 34.3 0.10
dre:567586 LReO_3-like 33.9 0.13
dre:100332008 LReO_3-like 33.5 0.16
dre:558087 LReO_3-like 33.5 0.16
dre:100329237 LReO_3-like 33.5 0.16
cel:F44E2.2 retr-1; RETRotransposon-like family member (retr-1) 33.5 0.17
dre:100334406 retrovirus polyprotein, putative-like 33.1 0.20
dre:100332492 zinc finger protein-like 33.1 0.23
dre:569341 LReO_3-like 32.7 0.26
dre:100332939 RETRotransposon-like family member (retr-1)-like 32.7 0.27
dre:100333923 LReO_3-like 32.7 0.27
dre:798059 LReO_3-like 32.7 0.29
dre:100007839 RETRotransposon-like family member (retr-1)-like 32.7 0.29
dre:100332276 Gap-Pol polyprotein-like 32.7 0.30
dre:100330636 RETRotransposon-like family member (retr-1)-like 32.7 0.30
dre:793680 LReO_3-like 32.7 0.32
dre:100330262 RETRotransposon-like family member (retr-1)-like 32.7 0.32
dre:100333989 LReO_3-like 32.3 0.34
dre:100333332 LReO_3-like 32.3 0.39
dre:100151445 RETRotransposon-like family member (retr-1)-like 32.3 0.41
dre:100148674 Gap-Pol polyprotein-like 32.3 0.41
dre:100330392 retrovirus polyprotein, putative-like 32.0 0.46
dre:553442 ccdc33; coiled-coil domain containing 33 31.6
dre:793061 LReO_3-like 31.6 0.66
dre:798826 LReO_3-like 31.6 0.66
dre:100330606 RETRotransposon-like family member (retr-1)-like 31.6 0.68
dre:100334944 LReO_3-like 31.6 0.68
dre:560117 LReO_3-like 31.6 0.71
dre:100332465 LReO_3-like 31.6 0.72
dre:100333032 LReO_3-like 31.6 0.72
dre:100329940 LReO_3-like 31.2 0.73
> sce:YGR109W-B Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated
as one unit; polyprotein is processed to
make a nucleocapsid-like protein (Gag), reverse transcriptase
(RT), protease (PR), and integrase (IN); similar to retroviral
genes (EC:3.4.23.- 3.1.26.4 2.7.7.7 2.7.7.49); K07497
putative transposase
Length=1547
Score = 61.6 bits (148), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 0/82 (0%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P ++ Y+ +C +C+ KS + GLLQ L I RW +S+ F+T +P T+ +
Sbjct 1129 PKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLN 1188
Query 61 SILVMVDSLSKMAQFVPAKKSF 82
ILV+VD SK A F+ +K+
Sbjct 1189 MILVVVDRFSKRAHFIATRKTL 1210
> sce:YIL082W-A Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated
as one unit; polyprotein is processed to
make a nucleocapsid-like protein (Gag), reverse transcriptase
(RT), protease (PR), and integrase (IN); similar to retroviral
genes (EC:3.4.23.- 3.1.26.4 2.7.7.7 2.7.7.49); K07497
putative transposase
Length=1498
Score = 61.6 bits (148), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 0/82 (0%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P ++ Y+ +C +C+ KS + GLLQ L I RW +S+ F+T +P T+ +
Sbjct 1155 PKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLN 1214
Query 61 SILVMVDSLSKMAQFVPAKKSF 82
ILV+VD SK A F+ +K+
Sbjct 1215 MILVVVDRFSKRAHFIATRKTL 1236
> dre:100151111 RETRotransposon-like family member (retr-1)-like
Length=1585
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PG+ +V+ C +C+ K NQK AG LQ I SR + + I +P +T ++
Sbjct 1239 PGLWTDVKRHVKECVKCQTIKYDNQKPAGKLQS-TITSRPNQMLGVDIIGPLPRSTQQNE 1297
Query 61 SILVMVDSLSKMAQFVPAKKS 81
+LV VD SK +F P +++
Sbjct 1298 YLLVFVDYYSKWVEFFPMRQA 1318
> dre:100329436 RETRotransposon-like family member (retr-1)-like
Length=1188
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M + +V++CT C+ +K +K AG LQQ + W + + + +P +T G+
Sbjct 849 PNMWRDVSDFVKNCTSCQQNKPECRKPAGKLQQTEV-KEPWEMLGVDLMGPLPRSTLGNT 907
Query 61 SILVMVDSLSKMAQFVPAKKSFTG 84
+LV+VD S + P +K+ G
Sbjct 908 QLLVVVDYYSHWVEMFPLRKATAG 931
> dre:100148778 RETRotransposon-like family member (retr-1)-like
Length=1151
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M + +V++CT C+ +K +K AG LQQ + W + + + +P +T G+
Sbjct 804 PNMWRDVSDFVKNCTSCQQNKPECRKPAGKLQQTEV-KEPWEMLGVDLMGPLPRSTLGNT 862
Query 61 SILVMVDSLSKMAQFVPAKKSFTG 84
+LV+VD S + P +K+ G
Sbjct 863 QLLVVVDYYSHWVEMFPLRKATAG 886
> dre:100334846 RETRotransposon-like family member (retr-1)-like
Length=1402
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M + +V++CT C+ +K +K AG LQQ + W + + + +P +T G+
Sbjct 1008 PNMWRDVSDFVKNCTSCQQNKPECRKPAGKLQQTEV-KEPWEMLGVDLMGPLPRSTLGNT 1066
Query 61 SILVMVDSLSKMAQFVPAKKSFTG 84
+LV+VD S + P +K+ G
Sbjct 1067 QLLVVVDYYSHWVEMFPLRKATAG 1090
> dre:100148678 RETRotransposon-like family member (retr-1)-like
Length=866
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PG+ +V+ C +C+ K NQK AG LQ I SR + + + +P +T ++
Sbjct 624 PGLWTDVKRHVKECVKCQTIKYDNQKPAGKLQS-TITSRPNQMLGVDIMGPLPRSTQQNE 682
Query 61 SILVMVDSLSKMAQFVPAKKS 81
+LV VD SK +F P +++
Sbjct 683 YLLVFVDYYSKWVEFFPMRQA 703
> dre:100150386 RETRotransposon-like family member (retr-1)-like
Length=1176
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PG+ +V+ C +C+ K NQK AG LQ I SR + + + +P +T ++
Sbjct 803 PGLWTDVKRHVKECVKCQTIKYDNQKPAGKLQS-TITSRPNQMLGVDIMGPLPRSTQQNE 861
Query 61 SILVMVDSLSKMAQFVPAKKS 81
+LV VD SK +F P +++
Sbjct 862 YLLVFVDYYSKWVEFFPMRQA 882
> dre:100332096 RETRotransposon-like family member (retr-1)-like
Length=456
Score = 44.7 bits (104), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLI--PSRRWAHVSLVFITDVPLTTTG 58
PGM YV++C +C+ +K N+K AG LQQ+ P+ W + + +P +
Sbjct 115 PGMWTDIKKYVKNCAKCQVTKWDNRKPAGKLQQVTTSRPNEMWG---VDIMGPMPKSGKQ 171
Query 59 HDSILVMVDSLSKMAQFVPAKKS 81
++ +LV VD SK + P + +
Sbjct 172 NEYLLVFVDYFSKWVELFPMRHA 194
> dre:100333676 RETRotransposon-like family member (retr-1)-like
Length=922
Score = 44.3 bits (103), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLI--PSRRWAHVSLVFITDVPLTTTG 58
PGM YV++C +C+ +K N+K AG LQQ+ P+ W + + +P +
Sbjct 578 PGMWTDIKKYVKNCAKCQVTKWDNRKPAGKLQQVTTSRPNEMWG---VDIMGPMPKSGKQ 634
Query 59 HDSILVMVDSLSKMAQFVPAKKS 81
++ +LV VD SK + P + +
Sbjct 635 NEYLLVFVDYFSKWVELFPMRHA 657
> dre:100148672 RETRotransposon-like family member (retr-1)-like
Length=1398
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PG+ +V+ C +C+ K NQK AG LQ I SR + + + +P +T ++
Sbjct 1052 PGLWTDVKRHVKECVKCQTIKYDNQKPAGKLQS-TITSRPNQMLVVDIMGPLPRSTQQNE 1110
Query 61 SILVMVDSLSKMAQFVPAKKS 81
+ V VD SK +F P +++
Sbjct 1111 YLWVFVDYYSKWVEFFPMRQA 1131
> dre:100148144 RETRotransposon-like family member (retr-1)-like
Length=1272
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAH-VSLVFITDVPLTTTGH 59
P +R +YV+SC C+ K N K +GLLQ LI H + + P++ +
Sbjct 998 PSVRKEVWSYVKSCKLCQQYKPSNSKPSGLLQSNLITEP--GHTLGTDLMGPFPMSKKRN 1055
Query 60 DSILVMVDSLSKMAQFVPAKKSFTGR 85
ILV+VD +K + P + S T +
Sbjct 1056 AYILVIVDYFTKWTELFPLRDSKTQK 1081
> dre:799172 RETRotransposon-like family member (retr-1)-like
Length=1146
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAH-VSLVFITDVPLTTTGH 59
P +R +YV+SC C+ K N K +GLLQ LI H + + P++ +
Sbjct 855 PSIRKEVWSYVKSCKLCQQYKPSNSKPSGLLQSNLITEP--GHTLGTDLMGPFPMSKKRN 912
Query 60 DSILVMVDSLSKMAQFVPAKKSFTGR 85
ILV+V+ +K + P + S T +
Sbjct 913 AYILVIVEYFTKWTELFPLRDSKTQK 938
> dre:100333285 hypothetical protein LOC100333285
Length=340
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query 10 YVESCTRCRASKSLNQKSAGLLQQLLI--PSRRWAHVSLVFITDVPLTTTGHDSILVMVD 67
YV++C +C+ +K N+K AG LQQ+ P+ W + + +P + ++ +LV VD
Sbjct 8 YVKNCAKCQVTKWDNRKPAGKLQQVTTSRPNEMWG---VDIMGPMPKSGKQNEYLLVFVD 64
Query 68 SLSKMAQFVPAKKS 81
SK + P + +
Sbjct 65 YFSKWVELFPMRHA 78
> dre:100330416 hypothetical protein LOC100330416
Length=340
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query 10 YVESCTRCRASKSLNQKSAGLLQQLLI--PSRRWAHVSLVFITDVPLTTTGHDSILVMVD 67
YV++C +C+ +K N+K AG LQQ+ P+ W + + +P + ++ +LV VD
Sbjct 8 YVKNCAKCQVTKWDNRKPAGKLQQVTTSRPNEMWG---VDIMGPMPKSGKQNEYLLVFVD 64
Query 68 SLSKMAQFVPAKKS 81
SK + P + +
Sbjct 65 YFSKWVELFPMRHA 78
> dre:100149641 similar to guanylate binding protein 1, interferon-inducible,
67kDa
Length=1737
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PGM A + C++C SK LNQ A L+ SR +++ F T + + G +
Sbjct 1343 PGMEADVRKRCQECSQCAVSK-LNQPLARAPMGHLLASRPNQILAVDFTT-LERASDGRE 1400
Query 61 SILVMVDSLSKMAQFVPAK 79
+LV+ D SK Q VP +
Sbjct 1401 HVLVITDVFSKYTQAVPTR 1419
> dre:100005465 Gap-Pol polyprotein-like
Length=1154
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PGM + + C RC +K + + + L+ + R + + T + + G +
Sbjct 794 PGMFKFIEEWCKRCQRCTLAKVVRPRVRSFMGHLM--AERPLDILAIDFTLLEPASNGLE 851
Query 61 SILVMVDSLSKMAQFVPAK 79
++LVM D SK +Q +P K
Sbjct 852 NVLVMTDVFSKFSQAIPTK 870
> dre:100330525 LReO_3-like
Length=1366
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQK-SAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGH 59
PGM++ + Y +SC C+ + NQ S L+ + + + + + + + +P T +GH
Sbjct 593 PGMKSTVSHYCQSCHACQVAGKPNQVISPAPLKPIPVMTEPFEKLVVDCVGPLPRTKSGH 652
Query 60 DSILVMVDSLSKMAQFVPAK 79
+L ++ S ++ + +P +
Sbjct 653 SYLLTLMCSATRFPEAIPLR 672
> dre:100330527 RETRotransposon-like family member (retr-1)-like
Length=2670
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M + Y+++C RC K+L QKSA L + + V + F++ P + G
Sbjct 1458 PRMTSDIEQYIKNCGRCITRKTLPQKSAPLSH--ITSNGPLDLVCIDFLSLEP-DSKGIA 1514
Query 61 SILVMVDSLSKMAQFVPAK 79
++LV+ D ++ AQ P K
Sbjct 1515 NVLVITDHFTRYAQAFPTK 1533
> dre:100331687 retrovirus polyprotein, putative-like
Length=1341
Score = 34.3 bits (77), Expect = 0.10, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M +++C+RC KSL QKSA L+ + +R V + F++ P + D
Sbjct 795 PRMGTEVEHKIKTCSRCVRRKSLPQKSAPLVN--IQATRPLILVCMDFLSLEPDKSNTRD 852
Query 61 SILVMVDSLSKMAQFVP 77
ILV+ D +K A +P
Sbjct 853 -ILVITDFFTKYAVAIP 868
> dre:567586 LReO_3-like
Length=1349
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query 1 PGMRACTTAYVESCTRCR--ASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTG 58
PG+ Y ++C C+ A + L + +P R + L I +P + G
Sbjct 525 PGLNGEVKRYCQACPTCQKTAPQRPPPSPLIPLPIIEVPFDR---IGLDLIGPLPKSARG 581
Query 59 HDSILVMVDSLSKMAQFVPAKKS 81
H+ ILV++D ++ + +P +K+
Sbjct 582 HEHILVILDYATRYPEAIPLRKA 604
> dre:100332008 LReO_3-like
Length=1276
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 0/79 (0%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M Y +C+ C+ + ++ + LQ L I S + +++ + + ++ GH
Sbjct 449 PTMYTDVQTYCNTCSTCQTTSAVRHRDKAPLQPLPIVSTPFRRIAMDIVGPLERSSAGHR 508
Query 61 SILVMVDSLSKMAQFVPAK 79
ILV+ D ++ + P +
Sbjct 509 YILVVCDYATRYPEAFPLR 527
> dre:558087 LReO_3-like
Length=1276
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 0/79 (0%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M Y +C+ C+ + ++ + LQ L I S + +++ + + ++ GH
Sbjct 449 PTMYTDVQTYCNTCSTCQTTSAVRHRDKAPLQPLPIVSTPFRRIAMDIVGPLERSSAGHR 508
Query 61 SILVMVDSLSKMAQFVPAK 79
ILV+ D ++ + P +
Sbjct 509 YILVVCDYATRYPEAFPLR 527
> dre:100329237 LReO_3-like
Length=1276
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 0/79 (0%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M Y +C+ C+ + ++ + LQ L I S + +++ + + ++ GH
Sbjct 449 PTMYTDVQTYCNTCSTCQTTSAVRHRDKAPLQPLPIVSTPFRRIAMDIVGPLERSSAGHR 508
Query 61 SILVMVDSLSKMAQFVPAK 79
ILV+ D ++ + P +
Sbjct 509 YILVVCDYATRYPEAFPLR 527
> cel:F44E2.2 retr-1; RETRotransposon-like family member (retr-1)
Length=2186
Score = 33.5 bits (75), Expect = 0.17, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVF--ITDVPLTTTG 58
P MR C V +C +C + ++ L L P R + +V + DV L+ G
Sbjct 1497 PQMRVCVENCVRTCAKCLCANDHSK-----LTSSLTPYRMTFPLEIVACDLMDVGLSVQG 1551
Query 59 HDSILVMVDSLSKMAQFVP 77
+ IL ++D +K VP
Sbjct 1552 NRYILTIIDLFTKYGTAVP 1570
> dre:100334406 retrovirus polyprotein, putative-like
Length=1988
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M + Y+++C RC K+L QKSA L + + V + F++ P + G
Sbjct 1458 PRMTSDIEQYIKNCGRCITRKTLPQKSALLSH--ITSNGPLDLVCIDFLSLEP-DSKGIA 1514
Query 61 SILVMVDSLSKMAQFVPAK 79
++LV+ D ++ AQ P K
Sbjct 1515 NVLVITDHFTRYAQAFPTK 1533
> dre:100332492 zinc finger protein-like
Length=1439
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQK-SAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGH 59
PGM+A Y SC C+ NQK L+ + + ++ V L + +P T +GH
Sbjct 651 PGMKADVAKYCRSCHTCQIVGKPNQKIPPAPLKPIPVVDEPFSRVILDCVGPLPRTKSGH 710
Query 60 DSILVMVDSLSKMAQFVPAK 79
+L ++ + ++ + +P +
Sbjct 711 VYLLTLMCTTTRYPEAIPLR 730
> dre:569341 LReO_3-like
Length=1379
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLL--IPSRRWAHVSLVFITDVPLTTTG 58
PG+ A + ++C C+ + + L+ + +P R + + + +P + G
Sbjct 541 PGLEADVKRFCQACPTCQRTSPRTPPPSPLIPLPIIKVPFER---IGMDLVGPLPKSARG 597
Query 59 HDSILVMVDSLSKMAQFVPAKKS 81
H+ ILV+VD ++ + VP +K+
Sbjct 598 HEHILVIVDYATRYPEAVPLRKA 620
> dre:100332939 RETRotransposon-like family member (retr-1)-like
Length=733
Score = 32.7 bits (73), Expect = 0.27, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQK-SAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGH 59
PG++ ++ +C C+ + NQK L + I + HV L + +P T G+
Sbjct 226 PGLKKNVVSHCRTCHVCQVTGKPNQKIPPAPLVPIPIVGEPFEHVILDCVGPLPKTKAGN 285
Query 60 DSILVMVDSLSKMAQFVPAKK 80
+L ++ S ++ + +P +K
Sbjct 286 QFLLTIMCSATRFPEAIPLRK 306
> dre:100333923 LReO_3-like
Length=1299
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLL--IPSRRWAHVSLVFITDVPLTTTG 58
PG+ A + ++C C+ + + L+ + +P R + + + +P + G
Sbjct 363 PGLEADVKRFCQACPTCQRTSPRTPPPSPLIPLPIIEVPFER---IGMDLVGPLPKSARG 419
Query 59 HDSILVMVDSLSKMAQFVPAKKS 81
H+ ILV+VD ++ + VP +K+
Sbjct 420 HEHILVIVDYATRYPEAVPLRKA 442
> dre:798059 LReO_3-like
Length=1210
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLL--IPSRRWAHVSLVFITDVPLTTTG 58
PG+ A + ++C C+ + + L+ + +P R + + + +P + G
Sbjct 407 PGLEADVKRFCQACPTCQQTSPRTPPPSPLIPLPIIEVPFER---IGMDLVGPLPKSARG 463
Query 59 HDSILVMVDSLSKMAQFVPAKKS 81
H+ ILV+VD ++ + VP +K+
Sbjct 464 HEHILVIVDYATRYPEAVPLRKA 486
> dre:100007839 RETRotransposon-like family member (retr-1)-like
Length=731
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQK-SAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGH 59
PG+++ +AY SC C+ + NQ L + I S + + + + +P + GH
Sbjct 189 PGLKSDVSAYCRSCHSCQLAGKPNQVIPPAPLHPIPITSEPFERILIDCVGPLPKSKAGH 248
Query 60 DSILVMVDSLSKMAQFVPAKK 80
IL ++ + ++ + VP +
Sbjct 249 QYILTIMCAATRYPEAVPMRN 269
> dre:100332276 Gap-Pol polyprotein-like
Length=1363
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PG+ A + + C RC+A+K + + LL SR V++ F P + +G +
Sbjct 970 PGLSADVSRWCLECERCQAAKDTRPLAQSFMGHLLA-SRPNEIVAMDFTVLEP-SRSGIE 1027
Query 61 SILVMVDSLSKMAQFVPAK 79
++LV+ D SK +P +
Sbjct 1028 NVLVVTDVFSKYTLAIPTR 1046
> dre:100330636 RETRotransposon-like family member (retr-1)-like
Length=1406
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQK-SAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGH 59
PG+++ +AY SC C+ + NQ L + I S + + + + +P + GH
Sbjct 575 PGLKSDVSAYCRSCHSCQLAGKPNQVIPPAPLHPIPITSEPFERILIDCVGPLPKSKAGH 634
Query 60 DSILVMVDSLSKMAQFVPAKK 80
IL ++ + ++ + VP +
Sbjct 635 QYILTIMCAATRYPEAVPMRN 655
> dre:793680 LReO_3-like
Length=1368
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLL--IPSRRWAHVSLVFITDVPLTTTG 58
PG+ A + ++C C+ + + L+ + +P R + + + +P + G
Sbjct 432 PGLEADVKWFCQACPTCQRTSPRTPPPSPLIPLPIIEVPFER---IGMDLVGPLPKSARG 488
Query 59 HDSILVMVDSLSKMAQFVPAKKS 81
H+ ILV+VD ++ + VP +K+
Sbjct 489 HEHILVIVDYATRYPEAVPLRKA 511
> dre:100330262 RETRotransposon-like family member (retr-1)-like
Length=728
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQK-SAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGH 59
PG+++ +AY SC C+ + NQ L + I S + + + + +P + GH
Sbjct 189 PGLKSDVSAYCRSCHSCQLAGKPNQVIPPAPLHPIPITSEPFERILIDCVGPLPKSKAGH 248
Query 60 DSILVMVDSLSKMAQFVPAKK 80
IL ++ + ++ + VP +
Sbjct 249 QYILTIMCAATRYPEAVPMRN 269
> dre:100333989 LReO_3-like
Length=1437
Score = 32.3 bits (72), Expect = 0.34, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 39/85 (45%), Gaps = 0/85 (0%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M Y +C C+ + S+ + + L L + + + +++ + + ++TG+
Sbjct 610 PSMYTDVHTYCSTCAVCQKTSSVRRSARAPLHPLPVVTTPFKRIAMDIVGPLEKSSTGNQ 669
Query 61 SILVMVDSLSKMAQFVPAKKSFTGR 85
ILV+ D ++ + P + T +
Sbjct 670 YILVICDYATRYPEAFPLRSITTAK 694
> dre:100333332 LReO_3-like
Length=963
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PG+ Y ++C C+ S + L L I + + + + +P + GH+
Sbjct 315 PGLDGEVKRYCQACDICQ-RMSPQRPPPSPLITLPIIDVPFTRIGMDLVGPLPKSARGHE 373
Query 61 SILVMVDSLSKMAQFVPAKKS 81
ILV++D ++ + +P +K+
Sbjct 374 HILVILDYATRYPEAIPLRKA 394
> dre:100151445 RETRotransposon-like family member (retr-1)-like
Length=929
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 0/36 (0%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLI 36
P +R +YV+SC C+ K N K +GLLQ +I
Sbjct 818 PSVRKEVWSYVKSCKLCQQYKPSNSKPSGLLQSGII 853
> dre:100148674 Gap-Pol polyprotein-like
Length=1664
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PGM A + + C RC+ +K + + LL SR ++L F P + +G +
Sbjct 1123 PGMFADIARWCQECERCQCAKGTPSAPSSYMGHLLA-SRPNEILALDFTLMDP-SRSGLE 1180
Query 61 SILVMVDSLSKMAQFVPAK 79
++LVM D +K +P +
Sbjct 1181 NVLVMTDIFTKYTLAIPTR 1199
> dre:100330392 retrovirus polyprotein, putative-like
Length=1887
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M + YV++C RC K+L +K+A L L + + V + F++ P + G
Sbjct 1511 PRMSSYVEQYVKNCGRCVTRKTLPKKAAPL--NHLTSNGPFDLVCINFLSIEP-DSRGLS 1567
Query 61 SILVMVDSLSKMAQ 74
++LV+ D ++ AQ
Sbjct 1568 NVLVVTDHFTRYAQ 1581
> dre:553442 ccdc33; coiled-coil domain containing 33
Length=1768
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PGM + + C RC+ +K + + +LL +R V+L F P + G +
Sbjct 897 PGMSGDIARWCQECERCQCAKGVQPIPVSFMGRLLA-ARPNEIVALDFTVLEP-SHPGIE 954
Query 61 SILVMVDSLSKMAQFVPAK 79
++LV+ D SK VP +
Sbjct 955 NVLVITDIFSKYTLAVPTR 973
> dre:793061 LReO_3-like
Length=1490
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PG++A Y +SC C+ SL+ LQ L + S + + + + V ++ G+
Sbjct 664 PGLKADVVQYCKSCPECQLV-SLHHPPRVPLQPLPLISTPFERLGMDIVGPVEKSSLGNR 722
Query 61 SILVMVDSLSKMAQFVPAK 79
+LV+ D ++ + P K
Sbjct 723 FLLVITDYATRYPEVFPLK 741
> dre:798826 LReO_3-like
Length=1490
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
PG++A Y +SC C+ SL+ LQ L + S + + + + V ++ G+
Sbjct 664 PGLKADVVQYCKSCPECQLV-SLHHPPRVPLQPLPLISTPFERLGMDIVGPVEKSSLGNR 722
Query 61 SILVMVDSLSKMAQFVPAK 79
+LV+ D ++ + P K
Sbjct 723 FLLVITDYATRYPEVFPLK 741
> dre:100330606 RETRotransposon-like family member (retr-1)-like
Length=722
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQK-SAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGH 59
PG++ ++ SC C+ + NQK LQ + + S + H+ + + +P + GH
Sbjct 7 PGVKRDVARFIRSCHTCQLTGKPNQKVPTAPLQPIPVTSNPFGHLIIDCVGPLPRSRAGH 66
Query 60 DSILVMV 66
+L ++
Sbjct 67 HYLLTIM 73
> dre:100334944 LReO_3-like
Length=1181
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query 1 PGMRACTTAYVESCTRCR--ASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTG 58
PG+ Y ++C C+ + + L + +P R + + I +P + G
Sbjct 409 PGLDGEVKRYCQACDICQRTSPQRPPPSPLIPLPIIEVPFNR---IGMDLIGPLPKSARG 465
Query 59 HDSILVMVDSLSKMAQFVPAKKS 81
H+ ILV++D ++ + +P +K+
Sbjct 466 HEHILVILDYATRYPEAIPLRKA 488
> dre:560117 LReO_3-like
Length=1449
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 0/85 (0%)
Query 1 PGMRACTTAYVESCTRCRASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTGHD 60
P M +Y +C C+ + ++ + L L + S + +++ + + +T+GH
Sbjct 659 PSMYTDVQSYCTTCPTCQKTSTVRHQGKAPLLPLPVISVPFQRIAMDIVGPLERSTSGHQ 718
Query 61 SILVMVDSLSKMAQFVPAKKSFTGR 85
ILV+ D ++ + P + T +
Sbjct 719 YILVISDYATRYPEAFPLRSITTAK 743
> dre:100332465 LReO_3-like
Length=1304
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query 1 PGMRACTTAYVESCTRCR--ASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTG 58
PG+ Y ++C C+ + + L + +P R + + I +P + G
Sbjct 523 PGLDGEVKRYCQACDICQRTSPQRPPPSPLIPLPIIEVPFNR---IGMDLIGPLPKSARG 579
Query 59 HDSILVMVDSLSKMAQFVPAKKS 81
H+ ILV++D ++ + +P +K+
Sbjct 580 HEHILVILDYATRYPEAIPLRKA 602
> dre:100333032 LReO_3-like
Length=1297
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query 1 PGMRACTTAYVESCTRCR--ASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTG 58
PG+ Y ++C C+ + + L + +P R + + I +P + G
Sbjct 409 PGLDGEVKRYCQACDICQRTSPQRPPPSPLIPLPIIEVPFNR---IGMDLIGPLPKSARG 465
Query 59 HDSILVMVDSLSKMAQFVPAKKS 81
H+ ILV++D ++ + +P +K+
Sbjct 466 HEHILVILDYATRYPEAIPLRKA 488
> dre:100329940 LReO_3-like
Length=1643
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query 1 PGMRACTTAYVESCTRCR--ASKSLNQKSAGLLQQLLIPSRRWAHVSLVFITDVPLTTTG 58
PG+ Y ++C C+ + + L + +P R + + I +P + G
Sbjct 523 PGLDGEVKRYCQACDICQRTSPQRPPPSPLIPLPIIEVPFNR---IGMDLIGPLPKSARG 579
Query 59 HDSILVMVDSLSKMAQFVPAKKS 81
H+ ILV++D ++ + +P +K+
Sbjct 580 HEHILVILDYATRYPEAIPLRKA 602
Lambda K H
0.322 0.130 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2035463248
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40