bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_3368_orf1
Length=120
Score E
Sequences producing significant alignments: (Bits) Value
At4g35290 31.6 0.38
CE29190 31.2 0.44
Hs17455861 30.0 1.0
Hs20911035 29.3 2.0
Hs22065985 28.9 2.1
CE08329 28.9 2.6
At2g32930 28.5 3.0
7296892 28.1 4.6
SPBC1734.15 27.7 4.9
7291810 27.3 6.9
Hs8922328 26.9 8.2
CE17873 26.9 9.0
At3g12680 26.9 9.4
CE07765 26.9 9.8
> At4g35290
Length=925
Score = 31.6 bits (70), Expect = 0.38, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query 50 YCHEKDHLKQ-------RSKREDRSSSCCSNSSSSSSSRGHYSDQSAPSCSSHFSSAASS 102
+ H K HLK R + + + SCCS + + + S S+ ++A +
Sbjct 653 FSHSKLHLKTAAKLLLYRREHSEYTRSCCSAHLAICGTNHNIKLHSESYIDSYSATAKLT 712
Query 103 RETSRERHRQRYSS 116
+ SR H+Q+++S
Sbjct 713 NQRSRHTHQQQWTS 726
> CE29190
Length=373
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
Query 19 EKELRIHRENRCLPCPFMIEAGVCTEGREC 48
++ L++HRENR +P + G T+G +
Sbjct 202 DEILQLHRENRLIPLSLLFTGGALTKGHQV 231
> Hs17455861
Length=106
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 0/31 (0%)
Query 18 REKELRIHRENRCLPCPFMIEAGVCTEGREC 48
+EK LR REN +P F+ A V T G C
Sbjct 36 KEKFLRKTRENPVVPIGFLCTAAVLTNGLYC 66
> Hs20911035
Length=492
Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query 46 RECGYCHEKDHL----KQRSKREDRSSSCCSNSSSSSSSRGHYSDQSAPSCSSHFSSAAS 101
RE G+ H ++ KQ+S++ DR+ + + S S GHYS+ S S + +
Sbjct 413 REMGFGHYEEEESCWEKQKSEKRDRTQN--RSRSRSRERDGHYSN----SHKSKYQTDLY 466
Query 102 SRETSRERHRQR 113
RE S++R R R
Sbjct 467 ERERSKKRDRSR 478
> Hs22065985
Length=258
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 0/65 (0%)
Query 16 ERREKELRIHRENRCLPCPFMIEAGVCTEGRECGYCHEKDHLKQRSKREDRSSSCCSNSS 75
E R K+ RE+R P + G TE R E+D LK S++ SS N
Sbjct 181 ESRWKQYLXGREDRAFPAERGVHEGAATEPRLPPRXXERDRLKYESQKSKSSSVAVGNDF 240
Query 76 SSSSS 80
SS
Sbjct 241 GFSSP 245
> CE08329
Length=1187
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 16/20 (80%), Gaps = 0/20 (0%)
Query 67 SSSCCSNSSSSSSSRGHYSD 86
S +C SNSSS+S+ + HYS+
Sbjct 668 SPACMSNSSSTSTPQKHYSE 687
> At2g32930
Length=453
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 0/27 (0%)
Query 33 CPFMIEAGVCTEGRECGYCHEKDHLKQ 59
C F + G C G +C Y H K+ L Q
Sbjct 267 CRFFMNTGTCKYGDDCKYSHPKERLLQ 293
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 0/25 (0%)
Query 32 PCPFMIEAGVCTEGRECGYCHEKDH 56
PCP+ ++ G+C G C + H H
Sbjct 134 PCPYYMQTGLCRFGVACKFHHPHPH 158
> 7296892
Length=416
Score = 28.1 bits (61), Expect = 4.6, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query 2 AAGGVGSRWQLTAAERREKELRI---HRENRCLPCPFMIEAGVCTEGRECGYCHEK 54
AAG VG L A E K R ++ NR C F ++ G C G EC Y H+K
Sbjct 131 AAGAVGR--SLAANEMLSKLARTAPYYKRNRPHICSFWVK-GECKRGEECPYRHDK 183
> SPBC1734.15
Length=542
Score = 27.7 bits (60), Expect = 4.9, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 0/65 (0%)
Query 54 KDHLKQRSKREDRSSSCCSNSSSSSSSRGHYSDQSAPSCSSHFSSAASSRETSRERHRQR 113
K+H SK E + S S+S+ S APS + +A S E H +
Sbjct 254 KEHSPATSKHEPEETPASPTPSVSASTSRERSTSVAPSFITSDQAATPDVLKSEEAHVES 313
Query 114 YSSQS 118
+S +S
Sbjct 314 FSKES 318
> 7291810
Length=880
Score = 27.3 bits (59), Expect = 6.9, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query 6 VGSRWQLTAAERREKELRIHRENRCLPCPFMIEAGVCTEGREC-GYCHEKDHLKQRSKRE 64
V + W T AER E H E + P ++ V +GR+ +CH +H+ S+R
Sbjct 657 VNANWLWTCAERWE-----HVEEKLFP----LDRKVRNKGRQPPAHCHSPEHVVNYSERS 707
Query 65 DRSSSCCSNSSSSSSS 80
+ S S S +
Sbjct 708 EISPSSSKQQEEQSGN 723
> Hs8922328
Length=420
Score = 26.9 bits (58), Expect = 8.2, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query 25 HRENRCLPCPFMIEAGVCTEGRECGYCHEK 54
++ NR C F ++ G C G EC Y HEK
Sbjct 157 YKRNRPHICSFWVK-GECKRGEECPYRHEK 185
> CE17873
Length=336
Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 0/55 (0%)
Query 62 KREDRSSSCCSNSSSSSSSRGHYSDQSAPSCSSHFSSAASSRETSRERHRQRYSS 116
K S +C SN SS S R ++ S P S ++ A R +H Q YS+
Sbjct 176 KYTPASYTCSSNFSSLSDGRYVHTLTSTPYSSYQYNGTAFIRMPWPIKHPQSYST 230
> At3g12680
Length=317
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query 33 CPFMIEAGVCTEGRECGYCHEKDHLKQRSKREDRSSSCCSNSSSSSSSRGHYSDQSA 89
C F ++ G C G C + H KD ++ S +D SS S +++ H + A
Sbjct 67 CTFYMKTGKCKFGLSCKFHHPKD-IQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPA 122
> CE07765
Length=857
Score = 26.9 bits (58), Expect = 9.8, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query 55 DHLKQRSKREDRSSSCCSNSSSSSSSRGHYSDQSAPSC---------SSHFSSAASS 102
D R+ E ++ + S ++S++SSR Y + S PS SS F SA SS
Sbjct 174 DTSHSRNPAETKNENTSSRTNSATSSRKDYLNTSIPSANVTCTEKYRSSEFGSAKSS 230
Lambda K H
0.313 0.122 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1160968786
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40